Citrus Sinensis ID: 001773

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010-----

MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSRLKRSPVKPTSPHLSPVSEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQIAAEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAETPKHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVDKLSSNTQSSTVNPEADAGQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCSSEADENKIKQDRDLAAAAERLAECQETILLLGKQLKSLRPQSEVIGSPYSERSQKGEFLPGEPATASLQEFDHAEMDSVTSANAQPHRVGAESPLDLYTSPCSPSENEASINKSPINSKHPKHRPTKSTSSSSTSAPTPEKSSRGFSRFFSSKGRNGH

cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHcccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccHHccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEccccccccccccccccccccccccHHHccccccHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHccHHHcHHHHHHccccEEEcEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHEcccHccEEEccccccHcccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccHHEcccccccc

MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLesvtlsklTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLvrkklpgpaaLAQMKMEVESLgrdygdsrlkrspvkptsphlspvsefsLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMqtstqqksptkSVVQIAAEgytsqnasnppsltsmseddnddkvscADSWATALISELSQIKKeknveksnkaetpkHLELMDDFLEMEKLAClsndtnsngtitasngpnnktsdivnhdasgavtsgedllseqqrdmnpsvdklssntqsstvnpeadagqpqLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQhsancisdevkcsdvscsaeaypgdaslnterkIDLTVQVISQELVAAITQIHDFVLFLGKEARavhdttnengfsQKIEEFYVSFNkvidsntyLVDFVFALSNVLAKASELRINVmgykdteiepnspdcidkvalpenkvikkdtsgerypngcahisnptsdpevpddgsivaAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQrnencavcsseadenkiKQDRDLAAAAERLAECQETILLLGKQLkslrpqsevigspysersqkgeflpgepataslqefdhaemdsvtsanaqphrvgaespldlytspcspseneasinkspinskhpkhrptkstsssstsaptpekssrgfsrffsskgrngh

MEEQIKELNEKlsaanseisakedlVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAaenatlsrslQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLvrkklpgpaaLAQMKMEVESLGrdygdsrlkrspvkptsphlspvsefslDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMqtstqqksptkSVVQIAAEgytsqnasnppslTSMSEDDNDDKVSCADSWATALISElsqikkeknveksnkaetpkHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNpsvdklssntqsstvnpeadagqpqlMKLRSRISMLLEtiskdadmgkIVEDIKRVVEDEHVTLHqhsancisdevKCSDVSCSAEAypgdaslnteRKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGykdteiepnspdcidkvalpeNKVIkkdtsgerypngcahisnptsdpevPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCSSEADENKIKQDRDLAAAAERLAECQETILLLgkqlkslrpqsevigspysersqkgeFLPGEPATASLQEFDHAEMDSVTSANAQPHRVGAESPLDLYTSPCSPSENEasinkspinskhpkhrptkstsssstsaptpekssrgfsrffsskgrngh

MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWekaeaealalkNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSRLKRSPVKPTSPHLSPVSEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQIAAEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAETPKHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVDKLSSNTQSSTVNPEADAGQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACkfsleefeelklekDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCSSEADENKIKQdrdlaaaaerlaeCQETILLLGKQLKSLRPQSEVIGSPYSERSQKGEFLPGEPATASLQEFDHAEMDSVTSANAQPHRVGAESPLDLYTSPCSPSENEASINKSPINSKHpkhrptkstsssstsaptpekssrgfsrffsskgrNGH

**********************************************ALALKNHLESVTLSKLT****AAHLDGALKECMRQIRNL*****QKLQDFVLTKTKQWDKIRLEFEAKIANFEQELL***********************************LLKGNIEQCEREINSAKYELHIV**************************************C*RLRGL**************************************************************************************************************************************************************WATALI***********************************************************************************************************************SMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEI******CIDKVA**************************************VAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLE*****LY****************************************************************************************************************RLAECQETILLLGK*****************************************************************************************************************************

***QIKE*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SK*****

MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEK***************EGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSR**************PVSEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSL*****************VQIAAEGYTSQNA*****************VSCADSWATALISELSQIKK*********AETPKHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQR************************GQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCSSEADENKIKQDRDLAAAAERLAECQETILLLGKQLKSLRPQSEVIGSPYSERSQKGEFLPGEPATASLQEFDHAEMDSVTSANAQPHRVGAESPLDLYTS**********INKSPI*****************************FSRFF********

MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKME********************************LDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTST****************************************************ELSQIKKEK************HLELMDDFLEMEKLACLS******************************************************************AGQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCI*DEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDT**EPNSPDCIDKVALPENKVIKKDT****************SDPEVPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCSS*ADENKIKQDRDLAAAAERLAECQETILLLGKQLKSLRP**********************************************************************************************************************

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MEEQxxxxxxxxxxxxxxxxxxxxxVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSRLKRSPVKPTSPHLSPVSEFSLDNxxxxxxxxxxxxxxxxxxxxxxxxxxxxLAKRNSExxxxxxxxxxxxxxxxxxxxxxxxxxxxKSPTKSVVQIAAEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAETPKHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVDKLSSNTQSSTVNPEADAGQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACKFSLEExxxxxxxxxxxxxxxxxxxxxLEMTKSQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAVCSSEADENKIKQDRDLAAAAERLAECQETILLLGKQLKSLRPQSEVIGSPYSERSQKGEFLPGEPATASLQEFDHAEMDSVTSANAQPHRVGAESPLDLYTSPCSPSENEASINKSPINSKHPKHRPTKSTSSSSTSAPTPEKSSRGFSRFFSSKGRNGH

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1015	2.2.26 [Sep-21-2011]
Q0WSY2		982	Filament-like plant prote	yes	no	0.892	0.922	0.564	0.0
Q9C698		1054	Filament-like plant prote	no	no	0.915	0.881	0.533	0.0
O65649		996	Filament-like plant prote	no	no	0.416	0.424	0.565	1e-124
Q9SLN1		898	Filament-like plant prote	no	no	0.387	0.437	0.398	2e-69
Q9MA92		615	Filament-like plant prote	no	no	0.194	0.320	0.438	5e-36
Q9CAP9		779	Filament-like plant prote	no	no	0.190	0.247	0.412	9e-35
Q8LLE5		582	Filament-like plant prote	N/A	no	0.182	0.317	0.380	1e-29
Q9SFF4		629	Filament-like plant prote	no	no	0.165	0.267	0.352	5e-26

>sp\|Q0WSY2\|FPP4_ARATH Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=2 SV=1	Back alignment and function desciption

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1028 (56%), Positives = 715/1028 (69%), Gaps = 122/1028 (11%)

Query: 1    MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLS 60
            +E+QIK+L+ KLS AN++I AKE LVKQH+KVAEEAV+GWEKAEAEA ALK HLE++TL+
Sbjct: 61   LEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETITLA 120

Query: 61   KLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQ 120
            KLT EDRAAHLDGALKECMRQIR+LKEE+EQKL D + TKT Q D +R EFE++I  +E+
Sbjct: 121  KLTVEDRAAHLDGALKECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEE 180

Query: 121  ELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHI 180
            ELLR  AEN  LSRSLQERSNML++ISEEKSQAE+EIE LK NIE CEREIN+ KYE H+
Sbjct: 181  ELLRCGAENDALSRSLQERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHV 240

Query: 181  VSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQM 240
            ++KELEIRNEEKNMSMRSAEAANKQH+EGVKKIAKLEAECQRLR LVRKKLPGPAALAQM
Sbjct: 241  ITKELEIRNEEKNMSMRSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLPGPAALAQM 300

Query: 241  KMEVESLGRDYG----DSRLKRSPVKPTSP------HLSPVSEFSLDNVQKFQKENEFLT 290
            KMEVESLG  +G    D R +RSPV+P+SP      H+S VSEFSLDN+QKF KEN+ LT
Sbjct: 301  KMEVESLG--FGDHRQDHRQRRSPVRPSSPLMSPMSHMSQVSEFSLDNMQKFHKENDLLT 358

Query: 291  ERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQ 350
            ERLLAMEEETKMLKEALAKRNSELQ SRNLCAKTA++LQ+LEAQM +    KSPTK   +
Sbjct: 359  ERLLAMEEETKMLKEALAKRNSELQVSRNLCAKTANRLQTLEAQMMS----KSPTKRGFE 414

Query: 351  IAAEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAET 410
            + AE ++ QNASNPPS+ SMSED N+D    A S A +L+SELSQ  K+K   K  K E+
Sbjct: 415  MPAEIFSRQNASNPPSMASMSEDGNED----ARSVAGSLMSELSQSNKDKANAKIKKTES 470

Query: 411  PKHLELMDDFLEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSE 470
               LELMDDFLEMEKLACL N +N+NG+                 D S A          
Sbjct: 471  ANQLELMDDFLEMEKLACLPNGSNANGST----------------DHSSA---------- 504

Query: 471  QQRDMNPSVDKLSSNTQSSTVNPEADAGQPQLMKLRSRISMLLETISKDADMGKIVEDIK 530
                                   ++DA  P   +L+ RIS +L+++ KDA   KI+ +I+
Sbjct: 505  -----------------------DSDAEIPPATQLKKRISNVLQSLPKDAAFEKILAEIQ 541

Query: 531  RVVEDEHVTL----HQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLTVQVISQE 586
              V+D  V L    H  + N +++E     ++ S E         TE K+ + V+VI+QE
Sbjct: 542  CAVKDAGVKLPSKSHGANLNGLTEE---KVIAMSNET--------TEEKVTI-VEVITQE 589

Query: 587  LVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALS 646
            L  A++QI+ FV +L KEA A  +      FSQK++EF  +F  V+     LVDF+F LS
Sbjct: 590  LSDALSQIYQFVTYLSKEATACSENRT---FSQKVQEFSTTFEGVLGKEKTLVDFLFDLS 646

Query: 647  NVLAKASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPT 706
             VL +ASEL+I+V+G+  + +E +SPDCIDKVALPENK ++KD+SGE Y NGC+     +
Sbjct: 647  RVLVEASELKIDVLGFHTSTVEIHSPDCIDKVALPENKALQKDSSGEHYQNGCSQ----S 702

Query: 707  SDPEVPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYET 766
            SD E+PDD +  + YE +   CKF+ EEFE LKLEK+   ++LA C  +LE TK++L ET
Sbjct: 703  SDSEIPDDCNGTSGYEPKLATCKFTTEEFEGLKLEKEKAESNLASCEADLEATKTKLQET 762

Query: 767  EQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENEL 826
            E+LLAEVK+ L SAQKSN + ETQLKCM ESYRSLET + ELE E+  L+ KIE+LE+EL
Sbjct: 763  EKLLAEVKSDLESAQKSNGMGETQLKCMVESYRSLETRSSELEIELTSLKGKIENLEDEL 822

Query: 827  QDEKMSHHNAMAKCKELEEQLQR-NENCAVCSSEADENKIKQDRDLAAAAERLAECQETI 885
             DEK +H  A+AKC+ELEEQLQR N+NC  CS   D+ K KQD +LAAAAE+LAECQETI
Sbjct: 823  HDEKENHREALAKCQELEEQLQRNNQNCPNCSVIEDDPKSKQDNELAAAAEKLAECQETI 882

Query: 886  LLLGKQLKSLRPQSE-VIGSPYSERSQKGEFLPGEPATASLQEFDHAEMDSVTSANAQPH 944
            LLLGKQLKS+ PQ+E V  SP  E+                Q  +  E +  TS N Q  
Sbjct: 883  LLLGKQLKSMCPQTEQVASSPSQEQ----------------QALNPEEEEYATSTNPQDS 926

Query: 945  RVGAESPLDLYTSPCSPSENEASINKSPINSKHPKHRPTKSTSSSSTSAPTPEKSSRGFS 1004
            ++ + S  D      +PS N     KSP+ S   KHR TKS SSSS+S  TPEK SRGFS
Sbjct: 927  KLSSPSDKD------TPSMNTM---KSPVAS---KHRHTKSNSSSSSSGLTPEKHSRGFS 974

Query: 1005 RFFSSKGR 1012
            RFFS+K +
Sbjct: 975  RFFSTKAK 982

Arabidopsis thaliana (taxid: 3702)

>sp\|Q9C698\|FPP6_ARATH Filament-like plant protein 6 OS=Arabidopsis thaliana GN=FPP6 PE=2 SV=1	Back alignment and function description

>sp\|O65649\|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2 SV=2	Back alignment and function description

>sp\|Q9SLN1\|FPP7_ARATH Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3 SV=2	Back alignment and function description

>sp\|Q9MA92\|FPP3_ARATH Filament-like plant protein 3 OS=Arabidopsis thaliana GN=FPP3 PE=2 SV=2	Back alignment and function description

>sp\|Q9CAP9\|FPP1_ARATH Filament-like plant protein 1 OS=Arabidopsis thaliana GN=FPP1 PE=2 SV=1	Back alignment and function description

>sp\|Q8LLE5\|FPP_SOLLC Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1	Back alignment and function description

>sp\|Q9SFF4\|FPP2_ARATH Filament-like plant protein 2 OS=Arabidopsis thaliana GN=FPP2 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1015
255538894		1041	Myosin heavy chain, striated muscle, put	0.937	0.914	0.705	0.0
147790037		1085	hypothetical protein VITISV_000522 [Viti	0.980	0.917	0.684	0.0
224065939		1082	predicted protein [Populus trichocarpa]	0.986	0.925	0.692	0.0
224082984		970	predicted protein [Populus trichocarpa]	0.941	0.985	0.679	0.0
359492726		1040	PREDICTED: filament-like plant protein 4	0.935	0.913	0.669	0.0
449437224		1078	PREDICTED: filament-like plant protein 4	0.978	0.921	0.665	0.0
449523688		1084	PREDICTED: LOW QUALITY PROTEIN: filament	0.978	0.916	0.664	0.0
302142632		993	unnamed protein product [Vitis vinifera]	0.891	0.911	0.652	0.0
356564349		1076	PREDICTED: filament-like plant protein 6	0.977	0.921	0.649	0.0
356509656		1021	PREDICTED: filament-like plant protein 4	0.940	0.935	0.640	0.0

>gi\|255538894\|ref\|XP_002510512.1\| Myosin heavy chain, striated muscle, putative [Ricinus communis] gi\|223551213\|gb\|EEF52699.1\| Myosin heavy chain, striated muscle, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1377 bits (3564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1029 (70%), Positives = 836/1029 (81%), Gaps = 77/1029 (7%)

Query: 1    MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLS 60
            +E+QI ELNEKLSAANSE++ KE+LVKQH KVAEEAVSGWEKAEAEALALKNHLESVTLS
Sbjct: 76   LEDQINELNEKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLS 135

Query: 61   KLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQ 120
            KLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQD VLTK KQ DKI+LE EAK+AN +Q
Sbjct: 136  KLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDVVLTKIKQCDKIKLELEAKMANLDQ 195

Query: 121  ELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHI 180
            ELLRSAAENA LSRSLQERSNMLIKISE KSQAEAEIELLK NIE CEREINS KYELHI
Sbjct: 196  ELLRSAAENAALSRSLQERSNMLIKISEGKSQAEAEIELLKSNIESCEREINSHKYELHI 255

Query: 181  VSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQM 240
            +SKELEIRNEEKNMSMRSAE ANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQM
Sbjct: 256  ISKELEIRNEEKNMSMRSAEVANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQM 315

Query: 241  KMEVESLGRDYGDSRLKRSPVKPTSPHLSPVSEFSLDNVQKFQKENEFLTERLLAMEEET 300
            K+EVESLGRD GDSRL+RSPVKP SPHLS V EFSLDN QKF KENEFLTERLLAMEEET
Sbjct: 316  KLEVESLGRDCGDSRLRRSPVKPPSPHLSAVPEFSLDNAQKFHKENEFLTERLLAMEEET 375

Query: 301  KMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQIAAEGYTSQN 360
            KMLKEALAKRNSELQASRNLCAKTAS+LQSLEAQ+  S QQKS   SVVQ+  EGY+SQN
Sbjct: 376  KMLKEALAKRNSELQASRNLCAKTASRLQSLEAQV--SNQQKSSPTSVVQVPIEGYSSQN 433

Query: 361  ASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAETPKHLELMDDF 420
             SNPPSLTSMSED NDD  SCADSWAT+LISELSQ+KKEK+ EK NK +  +HLELMDDF
Sbjct: 434  MSNPPSLTSMSEDGNDDDRSCADSWATSLISELSQLKKEKSTEKLNKTKNTQHLELMDDF 493

Query: 421  LEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVD 480
            LEMEKLACL+ + N   +++A+N              SG                     
Sbjct: 494  LEMEKLACLNANVNLVSSMSAAN--------------SG--------------------- 518

Query: 481  KLSSNTQSSTVNPEADAGQPQLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTL 540
                          ++A QP L+KLRSRISMLLE+IS+DADMGKI+ED++R+V+D H   
Sbjct: 519  --------------SEADQPCLVKLRSRISMLLESISQDADMGKILEDVQRIVQDTH--- 561

Query: 541  HQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDL---------TVQVISQELVAAI 591
               + + +S++V+ +D +C     P  AS+  +++I L         TV+ ++QEL  A+
Sbjct: 562  --GAVSSVSEDVRATDATC-----PEYASITGDKEITLFQDTNAATDTVRSVNQELATAV 614

Query: 592  TQIHDFVLFLGKEARAVHDTTNENG-FSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLA 650
            + IHDFVLFLGKEA AVHDT+++    SQKIE F V+FNKV++ NT L+DF+F LS VLA
Sbjct: 615  SSIHDFVLFLGKEAMAVHDTSSDGSDLSQKIEHFSVTFNKVLNGNTSLIDFIFYLSCVLA 674

Query: 651  KASELRINVMGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPE 710
            KASELR NV+GYK +E E NS DCIDKVALPENKV+++D+SGE Y N CAHIS+PTS+PE
Sbjct: 675  KASELRFNVLGYKGSEAEINSSDCIDKVALPENKVLQRDSSGESYQNSCAHISSPTSNPE 734

Query: 711  VPDDGSIVAAYESETTACKFSLEEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLL 770
            VPDDGS+V+ Y S TT CK SLEEFEELK EK+N+A DLARCTENLEMTKSQL+ETEQLL
Sbjct: 735  VPDDGSLVSGYGSNTTLCKVSLEEFEELKSEKNNVALDLARCTENLEMTKSQLHETEQLL 794

Query: 771  AEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKIESLENELQDEK 830
            AE K+QLASAQKSNSLAETQLKCMAESYRSLE  A+ELE EVNLL+AK E+LENELQDEK
Sbjct: 795  AEAKSQLASAQKSNSLAETQLKCMAESYRSLEARAEELETEVNLLQAKAETLENELQDEK 854

Query: 831  MSHHNAMAKCKELEEQLQRNENCAVCSSEAD-ENKIKQDRDLAAAAERLAECQETILLLG 889
              H +A+++ KELEEQLQ  E+C+VCS+ AD ENK  QDR+LAAAAE+LAECQETI LLG
Sbjct: 855  QCHWDALSRSKELEEQLQTKESCSVCSAAADAENKANQDRELAAAAEKLAECQETIFLLG 914

Query: 890  KQLKSLRPQSEVIGSPYSERSQKGE-FLPGEPATA--SLQEFDHAEMDSVTSANAQPHRV 946
            KQLK+LRPQ+E++GS YSERS+KG+ F   EP T+  +LQ+FD AEMD++ S N   HR 
Sbjct: 915  KQLKALRPQTELMGSAYSERSRKGDGFAEDEPTTSGMNLQDFDQAEMDAIVSTNH--HRA 972

Query: 947  GAESPLDLYTSPCSPSENEASINKSPINSKHPKHRPTKSTSSSSTSAPTPEKSSRGFSRF 1006
            GAESP+DLY  PCSPS+ E+++++SP+NSK PKHR TKSTSSSS+   TPEK SRGFSRF
Sbjct: 973  GAESPMDLYNQPCSPSDTESNLSRSPLNSKQPKHRSTKSTSSSSSHMATPEKHSRGFSRF 1032

Query: 1007 FSSKGRNGH 1015
            FS+KG+NG+
Sbjct: 1033 FSAKGKNGN 1041

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|147790037\|emb\|CAN60525.1\| hypothetical protein VITISV_000522 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224065939\|ref\|XP_002301986.1\| predicted protein [Populus trichocarpa] gi\|222843712\|gb\|EEE81259.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224082984\|ref\|XP_002306918.1\| predicted protein [Populus trichocarpa] gi\|222856367\|gb\|EEE93914.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359492726\|ref\|XP_002280306.2\| PREDICTED: filament-like plant protein 4-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449437224\|ref\|XP_004136392.1\| PREDICTED: filament-like plant protein 4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449523688\|ref\|XP_004168855.1\| PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|302142632\|emb\|CBI19835.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356564349\|ref\|XP_003550417.1\| PREDICTED: filament-like plant protein 6-like [Glycine max]	Back alignment and taxonomy information

>gi\|356509656\|ref\|XP_003523562.1\| PREDICTED: filament-like plant protein 4-like isoform 2 [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1015
TAIR\|locus:2824556		982	AT1G19835 "AT1G19835" [Arabido	0.432	0.447	0.683	2.9e-159
TAIR\|locus:2204990		1054	AT1G47900 "AT1G47900" [Arabido	0.492	0.474	0.607	3.7e-151
TAIR\|locus:2135154		996	AT4G36120 "AT4G36120" [Arabido	0.525	0.535	0.463	8.2e-115
TAIR\|locus:2204755		779	AT1G77580 [Arabidopsis thalian	0.548	0.715	0.221	1.7e-25
TAIR\|locus:2090684		704	AT3G19370 [Arabidopsis thalian	0.255	0.367	0.279	9.1e-23
UNIPROTKB\|E1BRE5		1411	EEA1 "Uncharacterized protein"	0.410	0.295	0.221	6.4e-15
TAIR\|locus:2061042		92	AT2G24470 "AT2G24470" [Arabido	0.073	0.815	0.546	7.4e-15
UNIPROTKB\|F1MYM9		1973	MYH11 "Uncharacterized protein	0.498	0.256	0.227	1.3e-14
ZFIN\|ZDB-GENE-030131-5870		1964	myh9a "myosin, heavy polypepti	0.507	0.262	0.225	1.5e-13
UNIPROTKB\|F1NWN3		1951	MYH11 "Myosin-11" [Gallus gall	0.755	0.393	0.186	6.1e-13

TAIR\|locus:2824556 AT1G19835 "AT1G19835" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1490 (529.6 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
 Identities = 311/455 (68%), Positives = 364/455 (80%)

Query:     1 MEEQIKELNEKLSAANSEISAKEDLVKQHTKVAEEAVSGWXXXXXXXXXXXNHLESVTLS 60
             +E+QIK+L+ KLS AN++I AKE LVKQH+KVAEEAV+GW            HLE++TL+
Sbjct:    61 LEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETITLA 120

Query:    61 KLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQ 120
             KLT EDRAAHLDGALKECMRQIR+LKEE+EQKL D + TKT Q D +R EFE++I  +E+
Sbjct:   121 KLTVEDRAAHLDGALKECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEE 180

Query:   121 ELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHI 180
             ELLR  AEN  LSRSLQERSNML++ISEEKSQAE+EIE LK NIE CEREIN+ KYE H+
Sbjct:   181 ELLRCGAENDALSRSLQERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHV 240

Query:   181 VSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQM 240
             ++KELEIRNEEKNMSMRSAEAANKQH+EGVKKIAKLEAECQRLR LVRKKLPGPAALAQM
Sbjct:   241 ITKELEIRNEEKNMSMRSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLPGPAALAQM 300

Query:   241 KMEVESLG-RDYG-DSRLKRSPVKPTSP------HLSPVSEFSLDNVQKFQKENEFLTER 292
             KMEVESLG  D+  D R +RSPV+P+SP      H+S VSEFSLDN+QKF KEN+ LTER
Sbjct:   301 KMEVESLGFGDHRQDHRQRRSPVRPSSPLMSPMSHMSQVSEFSLDNMQKFHKENDLLTER 360

Query:   293 LLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQIA 352
             LLAMEEETKMLKEALAKRNSELQ SRNLCAKTA++LQ+LEAQM +    KSPTK   ++ 
Sbjct:   361 LLAMEEETKMLKEALAKRNSELQVSRNLCAKTANRLQTLEAQMMS----KSPTKRGFEMP 416

Query:   353 AEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSNKAETPK 412
             AE ++ QNASNPPS+ SMSED N+D  S A S    L+SELSQ  K+K   K  K E+  
Sbjct:   417 AEIFSRQNASNPPSMASMSEDGNEDARSVAGS----LMSELSQSNKDKANAKIKKTESAN 472

Query:   413 HLELMDDFLEMEKLACLSNDTNSNGTITASNGPNN 447
              LELMDDFLEMEKLACL N +N+NG+   S+  ++
Sbjct:   473 QLELMDDFLEMEKLACLPNGSNANGSTDHSSADSD 507

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR\|locus:2204990 AT1G47900 "AT1G47900" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2135154 AT4G36120 "AT4G36120" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2204755 AT1G77580 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090684 AT3G19370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BRE5 EEA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

TAIR\|locus:2061042 AT2G24470 "AT2G24470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MYM9 MYH11 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-5870 myh9a "myosin, heavy polypeptide 9a, non-muscle" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NWN3 MYH11 "Myosin-11" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0WSY2	FPP4_ARATH	No assigned EC number	0.5642	0.8926	0.9226	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1015
pfam05911		767	pfam05911, DUF869, Plant protein of unknown functi	0.0
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	7e-09
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-08
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-08
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	6e-08
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-06
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-06
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-05
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	2e-05
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	6e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-04
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	2e-04
PRK05771		646	PRK05771, PRK05771, V-type ATP synthase subunit I;	7e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	8e-04
TIGR04211		198	TIGR04211, SH3_and_anchor, SH3 domain protein	8e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.001
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.001
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.001
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.002
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.003
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.003
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.003
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.004
PRK12704		520	PRK12704, PRK12704, phosphodiesterase; Provisional	0.004

>gnl\|CDD\|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869)	Back alignment and domain information

 Score =  684 bits (1766), Expect = 0.0
 Identities = 408/889 (45%), Positives = 543/889 (61%), Gaps = 127/889 (14%)

Query: 22  KEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQ 81
           KE LVKQH KVAEEAVSGWEKAEAEA ALK  LE VTL KL AEDRA+HLDGALKECMRQ
Sbjct: 1   KEALVKQHAKVAEEAVSGWEKAEAEAAALKQQLEDVTLKKLAAEDRASHLDGALKECMRQ 60

Query: 82  IRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSN 141
           +R ++EE EQK+QD    KTK+W+K++ E E K+   ++EL R+AAEN  LSRSLQE+S 
Sbjct: 61  LRQVREEQEQKIQDAATEKTKEWEKVKAELEKKLLELQKELARAAAENDALSRSLQEKSK 120

Query: 142 MLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIVSKELEIRNEEKNMSMRSAEA 201
           M++++SEEKS+AE+EIE LK  +E  E+E +S KYE+H++SKELEIRNEE+NMS++SA+A
Sbjct: 121 MIMELSEEKSRAESEIEDLKARLESAEKENSSLKYEVHVLSKELEIRNEERNMSLQSADA 180

Query: 202 ANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSRLKRSPV 261
           A+KQH+EGVKKIAKLEAECQRLRGLVRK+LPGPAALA+MK+EVESLG ++ D+R +RSP 
Sbjct: 181 ASKQHLEGVKKIAKLEAECQRLRGLVRKRLPGPAALAKMKLEVESLGSNFVDNRSRRSPS 240

Query: 262 KPTSPHLSPVSEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLC 321
             +S         S  N+QK QKENEFLT RLLAME+E K LKEAL+KRNSELQ SRN+ 
Sbjct: 241 PASSAF-----HSSPQNLQKAQKENEFLTARLLAMEDENKTLKEALSKRNSELQFSRNMY 295

Query: 322 AKTASKLQSLEAQMQTSTQQKSPTKSVVQIAAEGYTSQNASNPPSLTSMSEDDNDDKVSC 381
           AKTASKL  LEAQ++++            ++ E  +S N SNPPSLTS+SED NDD+ SC
Sbjct: 296 AKTASKLSVLEAQLESNR----------DVSTELSSSSNTSNPPSLTSVSEDGNDDEGSC 345

Query: 382 ADSWATALISELSQIKKEKNVEKSNKAE-TPKHLELMDDFLEMEKLACLSNDTNSNGTIT 440
           ++SWA+ALISEL Q KKEK + KS+K   +   +ELMDDFLEMEKLA L  +++++G   
Sbjct: 346 SESWASALISELEQFKKEKGMGKSSKGTASSSEMELMDDFLEMEKLAMLPPESSADG--- 402

Query: 441 ASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVDKLSSNTQSSTVNPEADAGQP 500
                                                 V     +  S  +    +    
Sbjct: 403 ------------------------------------SKVSSPKCSDSSVALTGPVEHEDN 426

Query: 501 QLMKLRSRISMLLETISKDADMGKIVEDIKRVVEDEHVTLHQ--HSANCISDEVKCSDVS 558
              KL  R+  +L+++ K      I+ +I  ++ED    L     S+N   +  + + V 
Sbjct: 427 LESKLSDRLPEVLQSVLKLVMEKHIISEISEILEDIEAELDSLERSSNGDDENEEVAMV- 485

Query: 559 CSAEAYPGDASLNTERKIDLTVQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENG-F 617
                     SL  E      V   SQEL  A+++I +F   L  E     D  +     
Sbjct: 486 ---------GSLVEESSA---VIERSQELEGAVSRISEFTSVLEHEVTVCQDLLDGKADL 533

Query: 618 SQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINVMGYKDTEIEPNSPDCIDK 677
            + I+EF ++   V++    L D       V  +ASE++ N +G K +E E NSPD    
Sbjct: 534 EKFIQEFSLTLEWVVNQEKSLQD-------VSVEASEIKKNFLGLKSSEKEINSPD---- 582

Query: 678 VALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACKFSLEEFEE 737
                                                       E +   C  +LEE E 
Sbjct: 583 --------------------------------------------EVKGAVCISTLEELET 598

Query: 738 LKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAES 797
           LK EK+NL  +L++C ++LE +K++L ETE+ L E+K++L ++Q+SNSLAETQLKCM ES
Sbjct: 599 LKSEKENLDGELSKCKDDLEESKNKLQETEKKLEELKSELDASQESNSLAETQLKCMVES 658

Query: 798 YRSLETHAQELEAEVNLLRAKIESLENELQDEKMSHHNAMAKCKELEEQLQRNENCAVCS 857
           Y SLE  A++LEAE   L+ KI SLE+EL+ E+ +H   +AKC+ELEE+++R E      
Sbjct: 659 YESLELRAKDLEAEHKSLQEKISSLEDELEKERQNHQELIAKCRELEEKIERAEQEENMQ 718

Query: 858 SEADEN-KIKQDRDLAAAAERLAECQETILLLGKQLKSLRPQSEVIGSP 905
              +E  KIKQ++++AAAAE+LAECQETIL LGKQL+SL P  E +   
Sbjct: 719 KLDEEEQKIKQEKEIAAAAEKLAECQETILSLGKQLQSLAPPEEFLLDS 767

This family consists of a number of sequences found in Arabidopsis thaliana, Oryza sativa and Lycopersicon esculentum (Tomato). The function of this family is unknown. Length = 767

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|234501 TIGR04211, SH3_and_anchor, SH3 domain protein	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|237177 PRK12704, PRK12704, phosphodiesterase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1015
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	100.0
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	99.53
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	99.44
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	99.32
KOG0996		1293	consensus Structural maintenance of chromosome pro	99.22
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	99.17
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.92
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.91
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	98.88
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	98.83
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.82
PRK02224		880	chromosome segregation protein; Provisional	98.73
PRK02224		880	chromosome segregation protein; Provisional	98.6
KOG0964		1200	consensus Structural maintenance of chromosome pro	98.58
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.45
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.41
PRK03918		880	chromosome segregation protein; Provisional	98.39
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	98.33
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	97.97
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	97.83
PRK04778		569	septation ring formation regulator EzrA; Provision	97.79
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	97.65
KOG0933		1174	consensus Structural maintenance of chromosome pro	97.63
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	97.57
PF00038		312	Filament: Intermediate filament protein; InterPro:	97.52
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	97.48
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	97.45
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	97.41
PRK04863		1486	mukB cell division protein MukB; Provisional	97.35
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	97.28
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	97.26
PRK11637		428	AmiB activator; Provisional	97.25
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.14
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	97.12
PRK11637		428	AmiB activator; Provisional	97.11
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	97.1
PHA02562		562	46 endonuclease subunit; Provisional	97.1
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	97.08
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.06
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	97.05
PRK09039		343	hypothetical protein; Validated	97.01
KOG1003		205	consensus Actin filament-coating protein tropomyos	96.94
PF14662		193	CCDC155: Coiled-coil region of CCDC155	96.91
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	96.86
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	96.85
PHA02562		562	46 endonuclease subunit; Provisional	96.84
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	96.82
PF00038		312	Filament: Intermediate filament protein; InterPro:	96.81
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	96.8
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	96.75
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	96.74
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	96.69
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	96.68
PRK04863		1486	mukB cell division protein MukB; Provisional	96.68
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	96.67
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	96.66
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	96.64
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	96.63
KOG1003		205	consensus Actin filament-coating protein tropomyos	96.61
PRK03918		880	chromosome segregation protein; Provisional	96.57
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	96.55
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	96.54
KOG4673		961	consensus Transcription factor TMF, TATA element m	96.52
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	96.51
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	96.5
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	96.5
PRK09039		343	hypothetical protein; Validated	96.5
PRK04778		569	septation ring formation regulator EzrA; Provision	96.49
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	96.48
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	96.43
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	96.41
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	96.41
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	96.39
KOG0933		1174	consensus Structural maintenance of chromosome pro	96.37
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	96.35
KOG0963		629	consensus Transcription factor/CCAAT displacement	96.27
COG4372		499	Uncharacterized protein conserved in bacteria with	96.2
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	96.14
COG4942		420	Membrane-bound metallopeptidase [Cell division and	96.1
KOG0964		1200	consensus Structural maintenance of chromosome pro	96.07
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	95.78
PRK11281		1113	hypothetical protein; Provisional	95.7
KOG0963		629	consensus Transcription factor/CCAAT displacement	95.68
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	95.65
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	95.65
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	95.64
KOG0971		1243	consensus Microtubule-associated protein dynactin	95.59
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	95.55
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	95.49
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	95.49
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	95.47
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	95.38
PRK10869		553	recombination and repair protein; Provisional	95.37
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	95.35
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	95.34
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	95.33
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	95.19
PF04156		191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	95.16
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	95.06
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	95.06
PF08614		194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	94.96
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	94.95
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	94.9
KOG2991		330	consensus Splicing regulator [RNA processing and m	94.88
PF04156		191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	94.87
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	94.87
TIGR00634		563	recN DNA repair protein RecN. All proteins in this	94.79
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	94.75
PF06818		202	Fez1: Fez1; InterPro: IPR009638 This family repres	94.65
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	94.63
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	94.62
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	94.61
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	94.56
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	94.41
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	94.41
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	94.4
PF08614		194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	94.39
KOG0982		502	consensus Centrosomal protein Nuf [Cell cycle cont	94.36
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	94.27
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	94.25
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	94.16
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	94.15
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	94.13
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	94.09
PF12795		240	MscS_porin: Mechanosensitive ion channel porin dom	93.96
PRK11281		1113	hypothetical protein; Provisional	93.94
PF03148		384	Tektin: Tektin family; InterPro: IPR000435 Tektin	93.81
COG0497		557	RecN ATPase involved in DNA repair [DNA replicatio	93.71
PF14073		178	Cep57_CLD: Centrosome localisation domain of Cep57	93.69
PF10186		302	Atg14: UV radiation resistance protein and autopha	93.62
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	93.61
TIGR01000		457	bacteriocin_acc bacteriocin secretion accessory pr	93.56
KOG0971		1243	consensus Microtubule-associated protein dynactin	93.53
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	93.52
COG4477		570	EzrA Negative regulator of septation ring formatio	93.48
PRK01156		895	chromosome segregation protein; Provisional	93.45
KOG0979		1072	consensus Structural maintenance of chromosome pro	93.28
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	93.25
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	93.18
KOG1937		521	consensus Uncharacterized conserved protein [Funct	93.02
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	92.85
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	92.77
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	92.76
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	92.76
PF06818		202	Fez1: Fez1; InterPro: IPR009638 This family repres	92.67
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	92.66
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	92.61
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	92.49
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	92.39
PRK01156		895	chromosome segregation protein; Provisional	92.23
KOG0979		1072	consensus Structural maintenance of chromosome pro	92.19
PRK12704		520	phosphodiesterase; Provisional	92.07
PF10146		230	zf-C4H2: Zinc finger-containing protein ; InterPro	92.04
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	92.0
PF10498		359	IFT57: Intra-flagellar transport protein 57 ; Inte	91.9
PF14662		193	CCDC155: Coiled-coil region of CCDC155	91.85
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	91.81
PF13870		177	DUF4201: Domain of unknown function (DUF4201)	91.8
PF10186		302	Atg14: UV radiation resistance protein and autopha	91.8
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	91.75
TIGR03319		514	YmdA_YtgF conserved hypothetical protein YmdA/YtgF	91.74
PF13870		177	DUF4201: Domain of unknown function (DUF4201)	91.74
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	91.69
PF13514		1111	AAA_27: AAA domain	91.58
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	91.58
PF15450		531	DUF4631: Domain of unknown function (DUF4631)	91.58
PF10498		359	IFT57: Intra-flagellar transport protein 57 ; Inte	91.46
PF10212		518	TTKRSYEDQ: Predicted coiled-coil domain-containing	91.43
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	91.41
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	91.36
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	91.19
TIGR00634		563	recN DNA repair protein RecN. All proteins in this	91.12
PF13166		712	AAA_13: AAA domain	91.09
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	90.96
COG4372		499	Uncharacterized protein conserved in bacteria with	90.93
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	90.91
PF09304		107	Cortex-I_coil: Cortexillin I, coiled coil; InterPr	90.9
PF05384		159	DegS: Sensor protein DegS; InterPro: IPR008595 Thi	90.69
COG5185		622	HEC1 Protein involved in chromosome segregation, i	90.36
COG5185		622	HEC1 Protein involved in chromosome segregation, i	90.23
PF11559		151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	89.96
PF12072		201	DUF3552: Domain of unknown function (DUF3552); Int	89.9
COG4942		420	Membrane-bound metallopeptidase [Cell division and	89.74
COG2433		652	Uncharacterized conserved protein [Function unknow	89.73
PF15233		134	SYCE1: Synaptonemal complex central element protei	89.72
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	89.54
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	89.48
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	89.44
PRK10884		206	SH3 domain-containing protein; Provisional	89.36
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	89.23
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	89.22
KOG0288		459	consensus WD40 repeat protein TipD [General functi	89.02
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	88.89
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	88.89
PRK10246		1047	exonuclease subunit SbcC; Provisional	88.88
PRK00106		535	hypothetical protein; Provisional	88.87
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	88.77
PF07889		126	DUF1664: Protein of unknown function (DUF1664); In	88.72
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	88.63
KOG1937		521	consensus Uncharacterized conserved protein [Funct	88.38
PF15450		531	DUF4631: Domain of unknown function (DUF4631)	88.06
KOG0018		1141	consensus Structural maintenance of chromosome pro	87.87
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	87.67
PF05335		188	DUF745: Protein of unknown function (DUF745); Inte	87.52
PF11559		151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	87.33
TIGR03017		444	EpsF chain length determinant protein EpsF. Sequen	87.3
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	87.27
KOG4403		575	consensus Cell surface glycoprotein STIM, contains	87.06
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	87.01
COG4026		290	Uncharacterized protein containing TOPRIM domain,	86.9
PF10146		230	zf-C4H2: Zinc finger-containing protein ; InterPro	86.84
PF08702		146	Fib_alpha: Fibrinogen alpha/beta chain family; Int	86.81
KOG4787		852	consensus Uncharacterized conserved protein [Funct	86.73
KOG0982		502	consensus Centrosomal protein Nuf [Cell cycle cont	86.63
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	86.55
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	86.46
KOG2685		421	consensus Cystoskeletal protein Tektin [Cytoskelet	86.41
PF12795		240	MscS_porin: Mechanosensitive ion channel porin dom	86.36
COG4026		290	Uncharacterized protein containing TOPRIM domain,	86.28
PF15290		305	Syntaphilin: Golgi-localised syntaxin-1-binding cl	86.27
KOG2991		330	consensus Splicing regulator [RNA processing and m	85.99
COG1382		119	GimC Prefoldin, chaperonin cofactor [Posttranslati	85.83
PF05335		188	DUF745: Protein of unknown function (DUF745); Inte	85.73
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	85.72
TIGR03017		444	EpsF chain length determinant protein EpsF. Sequen	85.63
COG2433		652	Uncharacterized conserved protein [Function unknow	85.19
PRK03947		140	prefoldin subunit alpha; Reviewed	85.19
cd00632		105	Prefoldin_beta Prefoldin beta; Prefoldin is a hexa	85.09
PRK10929		1109	putative mechanosensitive channel protein; Provisi	85.07
COG1382		119	GimC Prefoldin, chaperonin cofactor [Posttranslati	84.9
PF11932		251	DUF3450: Protein of unknown function (DUF3450); In	84.55
KOG0972		384	consensus Huntingtin interacting protein 1 (Hip1)	84.42
COG3074		79	Uncharacterized protein conserved in bacteria [Fun	84.34
PF07106		169	TBPIP: Tat binding protein 1(TBP-1)-interacting pr	84.26
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	84.24
PF03962		188	Mnd1: Mnd1 family; InterPro: IPR005647 This family	84.18
KOG4438		446	consensus Centromere-associated protein NUF2 [Cell	83.82
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	83.55
KOG0239		670	consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	83.53
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	83.5
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	83.49
PF10234		267	Cluap1: Clusterin-associated protein-1; InterPro:	83.36
PF14197		69	Cep57_CLD_2: Centrosome localisation domain of PPC	83.36
PF02994		370	Transposase_22: L1 transposable element; InterPro:	83.19
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	82.83
PF05266		190	DUF724: Protein of unknown function (DUF724); Inte	82.82
PF05384		159	DegS: Sensor protein DegS; InterPro: IPR008595 Thi	82.65
PF13166		712	AAA_13: AAA domain	82.56
TIGR01000		457	bacteriocin_acc bacteriocin secretion accessory pr	82.3
PRK03947		140	prefoldin subunit alpha; Reviewed	82.09
PF12329		74	TMF_DNA_bd: TATA element modulatory factor 1 DNA b	82.07
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	81.92
PF04871		136	Uso1_p115_C: Uso1 / p115 like vesicle tethering pr	81.74
PF08826		61	DMPK_coil: DMPK coiled coil domain like; InterPro:	81.53
KOG3647		338	consensus Predicted coiled-coil protein [General f	81.33
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	81.24
TIGR02338		110	gimC_beta prefoldin, beta subunit, archaeal. Chape	81.22
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	81.13
COG1842		225	PspA Phage shock protein A (IM30), suppresses sigm	81.1
KOG0249		916	consensus LAR-interacting protein and related prot	80.55
PF11932		251	DUF3450: Protein of unknown function (DUF3450); In	80.16
TIGR02338		110	gimC_beta prefoldin, beta subunit, archaeal. Chape	80.04

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

Probab=100.00  E-value=3.4e-150  Score=1338.88  Aligned_cols=766  Identities=51%  Similarity=0.680  Sum_probs=658.6

Q ss_pred             hhHHHHhhhHHHHHHhhhhHHHHHHHHHHHHhHHHHhhhhhhHHHHHhhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Q 001773           22 KEDLVKQHTKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFVLTKT  101 (1015)
Q Consensus        22 kd~lvkqh~kvaeeav~gwekae~e~~~lK~~Le~~~~q~~~le~rv~hLd~aLKec~~qlr~~reeqeqki~~~~~~~~  101 (1015)
                      ||+|||||+|||||||+||||||+||++||+|||+++++++++||||+|||||||+||||||++|||||||||++|++++
T Consensus         1 k~~lvkqh~kvaeeav~gwekae~e~~~lk~~l~~~~~~~~~~e~r~~hld~aLkec~~qlr~~ree~eq~i~~~~~~~s   80 (769)
T PF05911_consen    1 KDDLVKQHAKVAEEAVSGWEKAEAEAASLKQQLEAATQQKLALEDRVSHLDGALKECMRQLRQVREEQEQKIHEAVAKKS   80 (769)
T ss_pred             CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 001773          102 KQWDKIRLEFEAKIANFEQELLRSAAENATLSRSLQERSNMLIKISEEKSQAEAEIELLKGNIEQCEREINSAKYELHIV  181 (1015)
Q Consensus       102 ~e~e~~~~ELEaKLaElEkeLeelkaEl~aLeeqLeelqeeI~EL~eeiErlEgEi~LLkERIenlEKE~e~LK~EL~~L  181 (1015)
                      +||++++.+|+.+|.++.++|..+.+++..+...|+...+.|.+|.+.+.++++++..++.|++++++++..|+|+++++
T Consensus        81 ~e~e~~~~~le~~l~e~~~~l~~~~~e~~~l~~~l~~~~~~i~~l~~~~~~~e~~~~~l~~~l~~~eken~~Lkye~~~~  160 (769)
T PF05911_consen   81 KEWEKIKSELEAKLAELSKRLAESAAENSALSKALQEKEKLIAELSEEKSQAEAEIEDLMARLESTEKENSSLKYELHVL  160 (769)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCChHHHHHhHHHHhhhcCCcCCccccCCCC
Q 001773          182 SKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVESLGRDYGDSRLKRSPV  261 (1015)
Q Consensus       182 qeELEil~EEle~s~qsaeal~KQ~lEl~KKLaKLEaEcqrLr~l~rk~lpgpaa~a~mk~ev~~~~~~~~~~r~rr~~~  261 (1015)
                      +++|++|++|+++..++++++++||++.++||++||+||+|||+||||||||||||||||+|||+|||+++++||||+|+
T Consensus       161 ~keleir~~E~~~~~~~ae~a~kqhle~vkkiakLEaEC~rLr~l~rk~lpgpaa~a~mk~ev~~~~~~~~~~r~r~~~~  240 (769)
T PF05911_consen  161 SKELEIRNEEREYSRRAAEAASKQHLESVKKIAKLEAECQRLRALVRKKLPGPAALAQMKNEVESLGRDSGENRRRRSPS  240 (769)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHhHHHHHHhccccccccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccchhhhHhhhhhhHHHHHHHHhHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHhhhccc
Q 001773          262 KPTSPHLSPVSEFSLDNVQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRNLCAKTASKLQSLEAQMQTSTQQ  341 (1015)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rl~~~eee~k~lke~l~~~~~elq~sr~~~a~t~~kl~~~e~q~~~~~~~  341 (1015)
                      ++++++.     ++.++.+.++++++|||+||++||||||||||+|++||+||||||+|||+|||||++||+||.     
T Consensus       241 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~eeEnk~Lke~l~~k~~ELq~sr~~~a~ta~kL~~~e~ql~-----  310 (769)
T PF05911_consen  241 RPSSPHD-----FSPQNPQKRSKESEFLTERLQAMEEENKMLKEALAKKNSELQFSRNMYAKTASKLSQLEAQLK-----  310 (769)
T ss_pred             ccccccc-----ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            8777653     566788899999999999999999999999999999999999999999999999999999993     


Q ss_pred             CCCCchhhhhhhccccCCCCCCCCCCCCCCCCCCCCCCcCcchhhHhhhhhhhhhhhhccccccC-CCCCCccccccchH
Q 001773          342 KSPTKSVVQIAAEGYTSQNASNPPSLTSMSEDDNDDKVSCADSWATALISELSQIKKEKNVEKSN-KAETPKHLELMDDF  420 (1015)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~s~~~s~~s~s~~~~dd~~s~~~swasalisel~~fk~~k~~~~~~-~~~~~~~~~lmDDF  420 (1015)
                           ++.++++++++++|++||||++|||++|+||++||+|||||||||||||||++|.+++++ .+..++||+|||||
T Consensus       311 -----~~~~~~~e~~~s~~~~~~~s~~s~se~~~dd~~s~s~SWAsaLiseldqfk~~k~~~~~~~~~~~~~~i~LMDDF  385 (769)
T PF05911_consen  311 -----SSGQVSMELSSSQNTSNPPSLTSMSEDGNDDEGSCSDSWASALISELDQFKNEKVISRSSSKTISSSDIDLMDDF  385 (769)
T ss_pred             -----HhhccccccccccCCCCCCchhcccccCCCCCCcccchhHHHHhchHHHhccccccccccccCCccccHHHHHHH
Confidence                 336888999999999999999999999999999999999999999999999999755555 44567799999999


Q ss_pred             HHhHhhhccccCCCCCCccccCCCCCCCCCcccccCCCcccccccchhhhhhccCCCcccccccccCCCCCCCCcccCch
Q 001773          421 LEMEKLACLSNDTNSNGTITASNGPNNKTSDIVNHDASGAVTSGEDLLSEQQRDMNPSVDKLSSNTQSSTVNPEADAGQP  500 (1015)
Q Consensus       421 lEmEkLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  500 (1015)
                      ||||||||+|.++++.++++.+.....      ....+.. +.+.+...                     ..  ..-.+.
T Consensus       386 lEmEkLA~~s~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~---------------------~~--~~~~~~  435 (769)
T PF05911_consen  386 LEMEKLAALSRDSSSPSSCSSSEVDSD------SSVTLES-SSKRESVL---------------------ES--DKLSDR  435 (769)
T ss_pred             HHHHHHHhcCCCCCCCCCCCCcccccc------ccccccc-cccccccc---------------------cc--hhhccc
Confidence            999999999998887777642111111      1111111 01111111                     00  001255


Q ss_pred             hhhHHHHHHHHHHHhh-ccccchhHHHHHHHHHhhhhhhhhhcccccccccccCCCcccccccCCCCCCCccchhhhhhh
Q 001773          501 QLMKLRSRISMLLETI-SKDADMGKIVEDIKRVVEDEHVTLHQHSANCISDEVKCSDVSCSAEAYPGDASLNTERKIDLT  579 (1015)
Q Consensus       501 ~~~~l~~~~~~~~e~~-~~~~~~~~il~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  579 (1015)
                      .|+|||++++.|+++. +++++  .||+||+.++.++++.       +...     +.     .+..+........-..+
T Consensus       436 ~~~wLqsv~k~v~~q~~~s~i~--~ILedI~~al~~~~~~-------~~~~-----~~-----~~~~~~~~~sL~e~~~s  496 (769)
T PF05911_consen  436 IPEWLQSVLKLVLEQKEVSKIS--EILEDIEIALDSINNS-------SNCD-----DD-----SEEYESMEASLVEESKS  496 (769)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHHHhhccc-------cccc-----cc-----cchhhhhhhhHHHHHHH
Confidence            7999999999999998 88877  9999999999998751       1110     00     00001111111112344


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhhhhhhhhhcCCCCchhhHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHhhhhhhh
Q 001773          580 VQVISQELVAAITQIHDFVLFLGKEARAVHDTTNENGFSQKIEEFYVSFNKVIDSNTYLVDFVFALSNVLAKASELRINV  659 (1015)
Q Consensus       580 ~~~~~~~l~~~~~~i~~~v~~~~~e~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~~~~~~f~~~l~~~l~~~~~~~~~~  659 (1015)
                      ...++.+|..++.+|+||+..+                    ++|.|+|+++|+|+++|.+|+.+++.+|+|++++||++
T Consensus       497 ~~~~s~eL~~avskIsEfv~~L--------------------ekeVh~C~DLLsgkadLE~fieE~s~tLdwIls~~~SL  556 (769)
T PF05911_consen  497 MIEISQELNVAVSKISEFVLVL--------------------EKEVHVCQDLLSGKADLERFIEEFSLTLDWILSNCFSL  556 (769)
T ss_pred             HHhhcccHHHHHHhHHHHHHHH--------------------HHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHccchH
Confidence            5568899999999998876655                    67888999999999999999999999999999999998


Q ss_pred             cCCCCCcCCCCCccccccccccchhhhccCCCCCCCCCCccCCCCCCCCCCCCCCCcccccccchhhhhccCHHHHHHHH
Q 001773          660 MGYKDTEIEPNSPDCIDKVALPENKVIKKDTSGERYPNGCAHISNPTSDPEVPDDGSIVAAYESETTACKFSLEEFEELK  739 (1015)
Q Consensus       660 ~~~~~~e~e~~~~~~~dk~~~~e~k~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~EeleqLE  739 (1015)
                      .+..         +..|.   +...+           .+|.     +..-++...      -......+..+.++++.++
T Consensus       557 qDv~---------s~~sE---IK~~f-----------~~~s-----s~e~E~~~~------dea~~~~~~el~eelE~le  602 (769)
T PF05911_consen  557 QDVS---------SMRSE---IKKNF-----------DGDS-----SSEAEINSE------DEADTSEKKELEEELEKLE  602 (769)
T ss_pred             HHHH---------HHHHH---HHHhh-----------hhcc-----cccccccch------HHHHHHHHHHHHHHHHHHH
Confidence            8711         11111   11111           0010     001110000      0233445567889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001773          740 LEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASAQKSNSLAETQLKCMAESYRSLETHAQELEAEVNLLRAKI  819 (1015)
Q Consensus       740 sEkeelE~eLee~~eklEel~~qLqelE~~LeELesQLesLqeS~selE~qLk~~~e~~edLesrL~eLeaEl~eLqeKV  819 (1015)
                      .++.++++.+..|+++++.++.+|+++++.|.+|+.+|..++++++.++++++++.+.|+.+++++..+++++++++.||
T Consensus       603 ~eK~~Le~~L~~~~d~lE~~~~qL~E~E~~L~eLq~eL~~~keS~s~~E~ql~~~~e~~e~le~~~~~~e~E~~~l~~Ki  682 (769)
T PF05911_consen  603 SEKEELEMELASCQDQLESLKNQLKESEQKLEELQSELESAKESNSLAETQLKAMKESYESLETRLKDLEAEAEELQSKI  682 (769)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhh-hcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001773          820 ESLENELQDEKMSHHNAMAKCKELEEQLQRNENC-AVCSSEADENKIKQDRDLAAAAERLAECQETILLLGKQLKSLRPQ  898 (1015)
Q Consensus       820 esLE~ELe~ek~~~eEleaK~keLEeQLe~~~~~-~lk~q~~kdLKikqEkEIaaAeeKLAEcQeTI~sLEKQLKsLa~~  898 (1015)
                      ..|+.||++++..+.++.++|.+|+++|+++... ......+.+++++++|+|++|++||||||+||.+||+|||+|+++
T Consensus       683 ~~Le~Ele~er~~~~e~~~kc~~Le~el~r~~~~~~~~~~~~~~~k~kqe~EiaaAA~KLAECQeTI~sLGkQLksLa~~  762 (769)
T PF05911_consen  683 SSLEEELEKERALSEELEAKCRELEEELERMKKEESLQQLANEDKKIKQEKEIAAAAEKLAECQETIASLGKQLKSLATP  762 (769)
T ss_pred             HHHHHHHHHHHhcchhhhhHHHHHHHHHHhhhcccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence            9999999999999999999999999999999872 222234778899999999999999999999999999999999999


Q ss_pred             CcccCCC
Q 001773          899 SEVIGSP  905 (1015)
Q Consensus       899 ~e~~~~~  905 (1015)
                      +||++++
T Consensus       763 ~d~~~ds  769 (769)
T PF05911_consen  763 EDFLLDS  769 (769)
T ss_pred             hhhhccC
Confidence            9999874

The function of this family is unknown.

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PRK10869 recombination and repair protein; Provisional	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>KOG2991 consensus Splicing regulator [RNA processing and modification]	Back alignment and domain information

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>TIGR00634 recN DNA repair protein RecN	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PF12795 MscS_porin: Mechanosensitive ion channel porin domain	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>PF03148 Tektin: Tektin family; InterPro: IPR000435 Tektin heteropolymers form unique protofilaments of flagellar microtubules []	Back alignment and domain information

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PF14073 Cep57_CLD: Centrosome localisation domain of Cep57	Back alignment and domain information

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>PRK12704 phosphodiesterase; Provisional	Back alignment and domain information

>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PF13870 DUF4201: Domain of unknown function (DUF4201)	Back alignment and domain information

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF	Back alignment and domain information

>PF13870 DUF4201: Domain of unknown function (DUF4201)	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF13514 AAA_27: AAA domain	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>PF15450 DUF4631: Domain of unknown function (DUF4631)	Back alignment and domain information

>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms	Back alignment and domain information

>PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>TIGR00634 recN DNA repair protein RecN	Back alignment and domain information

>PF13166 AAA_13: AAA domain	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold)	Back alignment and domain information

>PF05384 DegS: Sensor protein DegS; InterPro: IPR008595 This is a group of Bacillus DegS proteins	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch	Back alignment and domain information

>PF12072 DUF3552: Domain of unknown function (DUF3552); InterPro: IPR022711 This presumed domain is functionally uncharacterised	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF15233 SYCE1: Synaptonemal complex central element protein 1	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>PRK10884 SH3 domain-containing protein; Provisional	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PRK10246 exonuclease subunit SbcC; Provisional	Back alignment and domain information

>PRK00106 hypothetical protein; Provisional	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF15450 DUF4631: Domain of unknown function (DUF4631)	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>PF05335 DUF745: Protein of unknown function (DUF745); InterPro: IPR007999 This family consists of several uncharacterised Drosophila melanogaster proteins of unknown function	Back alignment and domain information

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch	Back alignment and domain information

>TIGR03017 EpsF chain length determinant protein EpsF	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]	Back alignment and domain information

>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>PF08702 Fib_alpha: Fibrinogen alpha/beta chain family; InterPro: IPR012290 Fibrinogen plays key roles in both blood clotting and platelet aggregation	Back alignment and domain information

>KOG4787 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG2685 consensus Cystoskeletal protein Tektin [Cytoskeleton]	Back alignment and domain information

>PF12795 MscS_porin: Mechanosensitive ion channel porin domain	Back alignment and domain information

>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]	Back alignment and domain information

>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp	Back alignment and domain information

>KOG2991 consensus Splicing regulator [RNA processing and modification]	Back alignment and domain information

>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF05335 DUF745: Protein of unknown function (DUF745); InterPro: IPR007999 This family consists of several uncharacterised Drosophila melanogaster proteins of unknown function	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>TIGR03017 EpsF chain length determinant protein EpsF	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK03947 prefoldin subunit alpha; Reviewed	Back alignment and domain information

>cd00632 Prefoldin_beta Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>KOG0972 consensus Huntingtin interacting protein 1 (Hip1) interactor Hippi [Signal transduction mechanisms]	Back alignment and domain information

>COG3074 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast)	Back alignment and domain information

>KOG4438 consensus Centromere-associated protein NUF2 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin	Back alignment and domain information

>PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89	Back alignment and domain information

>PF02994 Transposase_22: L1 transposable element; InterPro: IPR004244 Many human L1 elements are capable of retrotransposition	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>PF05266 DUF724: Protein of unknown function (DUF724); InterPro: IPR007930 This family contains several uncharacterised proteins found exclusively in Arabidopsis thaliana	Back alignment and domain information

>PF05384 DegS: Sensor protein DegS; InterPro: IPR008595 This is a group of Bacillus DegS proteins	Back alignment and domain information

>PF13166 AAA_13: AAA domain	Back alignment and domain information

>TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein	Back alignment and domain information

>PRK03947 prefoldin subunit alpha; Reviewed	Back alignment and domain information

>PF12329 TMF_DNA_bd: TATA element modulatory factor 1 DNA binding; InterPro: IPR022092 This is the middle region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes that contains at its N-terminal section a number of leucine zippers that could potentially form coiled coil structures	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>PF04871 Uso1_p115_C: Uso1 / p115 like vesicle tethering protein, C terminal region; InterPro: IPR006955 This domain identifies a group of proteins, which are described as: General vesicular transport factor, Transcytosis associate protein (TAP) and Vesicle docking protein	Back alignment and domain information

>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure	Back alignment and domain information

>KOG3647 consensus Predicted coiled-coil protein [General function prediction only]	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>TIGR02338 gimC_beta prefoldin, beta subunit, archaeal	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	Back alignment and domain information

>KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only]	Back alignment and domain information

>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>TIGR02338 gimC_beta prefoldin, beta subunit, archaeal	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1015
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	8e-12
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	3e-10
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-08
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	5e-08
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-07
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	6e-06
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	3e-05
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	4e-04
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	5e-07
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	7e-07
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-05
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-05
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-05
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 75.7 bits (185), Expect = 6e-14
 Identities = 100/701 (14%), Positives = 202/701 (28%), Gaps = 203/701 (28%)

Query: 70  HLD---GALKECMRQIRNLKEEHEQKLQDFVLTKTKQWDKIRLEFEAK-IANFEQELLRS 125
           H+D   G  +   + I          L  F        D     F+ K + +  + +L  
Sbjct: 6   HMDFETGEHQYQYKDI----------LSVFE-------DAFVDNFDCKDVQDMPKSILSK 48

Query: 126 A-AENATLSRSLQERSNMLIKISEEKSQAEAEI---ELLKGNIEQCEREINSAKYELHIV 181
              ++  +S+     +  L      K +   +    E+L+ N +     I   K E    
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI---KTEQRQP 105

Query: 182 SKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLR---GLVRKKLPGPAALA 238
           S    +  E+++      +   K ++  ++   KL      LR    ++   + G     
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL---IDG----- 157

Query: 239 QMKMEVESLGRDYGDSRLKRSPVKPTSPHLSPVSEFSLDNVQKFQKENEF----LTERLL 294
            +       G   G + +                +  L    K Q + +F    L     
Sbjct: 158 -VL------G--SGKTWV--------------ALDVCLS--YKVQCKMDFKIFWLN---- 188

Query: 295 AMEEETKMLKEALAKRNSE---LQASRNLCAKTASKLQSLEAQMQTSTQQKSPTKSVVQ- 350
                       L   NS    L+  + L  +      S          +    ++ ++ 
Sbjct: 189 ------------LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Query: 351 -IAAEGYTSQNASNPPSLTSMSEDD-NDDKV------SC------ADSWATALISELSQI 396
            + ++ Y          L  +   +  + K       SC           T  +S  +  
Sbjct: 237 LLKSKPY-------ENCLLVL--LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS--AAT 285

Query: 397 KKEKNVEKSNKAETP-KHLELMDDFLEMEKLACLSNDTNSN-----GTITAS--NGPN-N 447
               +++  +   TP +   L+  +L+  +   L  +  +        I  S  +G    
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 448 KTSDIVNHDASGAV--TSGEDLLSEQQRDM-------NPSVDKLSSNT------QSSTVN 492
                VN D    +  +S   L   + R M        PS   + +             +
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA-HIPTILLSLIWFDVIKSD 403

Query: 493 PEADAGQPQLMKLRSRISMLLETISKDADMGKI-VEDI---KRVVEDEHVTLHQHSANCI 548
                    ++    + S++     K      I +  I    +V  +    LH+     I
Sbjct: 404 VM------VVVNKLHKYSLVE----KQPKESTISIPSIYLELKVKLENEYALHRS----I 449

Query: 549 SDEVKCSDVSCSAEAYPGDASLNTE------------RKIDLTVQVISQELVAAITQIH- 595
            D                D                  + I+        E +     +  
Sbjct: 450 VDHYNIPKTFD-----SDDLIPPYLDQYFYSHIGHHLKNIEHP------ERMTLFRMVFL 498

Query: 596 DFVLFLGKEARAVHDTTNENGFSQKIE-----EFYVSFNKVIDSNTYLVDFVFALSNVLA 650
           DF  FL  E +  HD+T  N     +      +FY  +  + D++      V A+ + L 
Sbjct: 499 DFR-FL--EQKIRHDSTAWNASGSILNTLQQLKFYKPY--ICDNDPKYERLVNAILDFLP 553

Query: 651 KASELRINVMGYKDTEIEPNSPDCIDKVAL-PENKVIKKDT 690
           K  E   N++  K T         + ++AL  E++ I ++ 
Sbjct: 554 KIEE---NLICSKYT--------DLLRIALMAEDEAIFEEA 583

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00