Citrus Sinensis ID: 001820
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1009 | 2.2.26 [Sep-21-2011] | |||||||
| O81635 | 987 | Kinesin-4 OS=Arabidopsis | no | no | 0.951 | 0.972 | 0.558 | 0.0 | |
| P46875 | 754 | Kinesin-3 OS=Arabidopsis | no | no | 0.331 | 0.442 | 0.448 | 1e-83 | |
| P46864 | 745 | Kinesin-2 OS=Arabidopsis | no | no | 0.384 | 0.520 | 0.418 | 2e-83 | |
| P79955 | 643 | Carboxy-terminal kinesin | N/A | no | 0.345 | 0.542 | 0.439 | 1e-80 | |
| F4JGP4 | 790 | Kinesin-5 OS=Arabidopsis | no | no | 0.388 | 0.496 | 0.400 | 3e-79 | |
| O35231 | 824 | Kinesin-like protein KIFC | yes | no | 0.337 | 0.413 | 0.476 | 1e-77 | |
| P28739 | 770 | Kinesin-like protein klpA | yes | no | 0.387 | 0.507 | 0.419 | 1e-77 | |
| Q9BVG8 | 833 | Kinesin-like protein KIFC | no | no | 0.337 | 0.409 | 0.473 | 2e-77 | |
| Q07970 | 793 | Kinesin-1 OS=Arabidopsis | no | no | 0.334 | 0.426 | 0.431 | 4e-77 | |
| Q5XI63 | 693 | Kinesin-like protein KIFC | no | no | 0.410 | 0.597 | 0.385 | 9e-76 |
| >sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1015 (55%), Positives = 724/1015 (71%), Gaps = 55/1015 (5%)
Query: 7 LSFSVASVVEDVLQQHGNRPRDLDLESRKAEEAASRRYEAAGWLRKMVGVVAARDLPAEP 66
LSFSV S+VEDVLQQH +R D+ L SRK EE++ RRYEAAGWLR M+GV +D P EP
Sbjct: 11 LSFSVVSIVEDVLQQHSSRSSDVGLVSRKVEESSLRRYEAAGWLRDMIGVSNGKDFPGEP 70
Query: 67 SEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPDTVLVPDGAALSAYQYFENVRNFLVA 126
SEEEFRLGLRSGI+LCNV+NKV PG+V KVVE+PD V DGAALSA+QYFEN+RNFLVA
Sbjct: 71 SEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDDV--ADGAALSAFQYFENIRNFLVA 128
Query: 127 VQEMGLPTFEASDLEQGGKSARVVNCVLALKSYGEWKQTGGNGVWKFGGTIKSTSLGTKS 186
++EMGLP+FEASD+E+GGKS R+VNC+LALKSY EWK G NG W++G +K K
Sbjct: 129 IEEMGLPSFEASDMEKGGKSIRIVNCILALKSYSEWKLKGENGPWRYGSNMKHNFGSRKL 188
Query: 187 FIRKNSEPFMNSLSRTSSINEKSLNSHSDLDSNKMSSSGSFSMLVRAVLLDKKPEEIPTV 246
F+RK+SEPF++S+SRT S + S + D + S +G LVR+ + D+K E+IP V
Sbjct: 189 FLRKSSEPFVSSISRTQSTDMLSTDQPLSSDGDSRSING----LVRSFIADRKHEDIPNV 244
Query: 247 VESVLSKLVEEFEHRIASQYEQMKTAPYHV------NKSLLKSAIVDKKGEDKNVKGSKR 300
VESVL+K++EE + R++ E MK++ + +++++S + D + ++ + S
Sbjct: 245 VESVLNKVMEEVQQRLSIHNEMMKSSSKPIPEDDSSCETVVRSQLCDARQHEEAEENSPP 304
Query: 301 ---EECFQKNNISDEELKSQSLKQKMIFDQQHEDIQELKHTLHTTKAGIQFMQMKFHEEF 357
E+ FQ+ N E +QK++ +QQ + IQELK TL+TTKAG++ +QMK+ E+F
Sbjct: 305 QVVEKKFQRTNFEHHE------EQKILLNQQ-KHIQELKQTLYTTKAGMKLLQMKYQEDF 357
Query: 358 SNLGIHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQ-SNYLSTVD 416
+LG H++GLA+AA+GY RVLEENRKLYN VQDLKG+IRVYCRVRPFL GQ S LS V+
Sbjct: 358 FHLGKHLNGLAYAATGYKRVLEENRKLYNLVQDLKGNIRVYCRVRPFLPGQESGGLSAVE 417
Query: 417 HIEEGNITINTPSKHGK-GWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGYNVCIFAY 475
I+EG ITI PSK+GK G K F FNKV+GPSATQ EVFSDMQPL+RSVLDGYNVCIFAY
Sbjct: 418 DIDEGTITIRVPSKYGKAGQKPFMFNKVFGPSATQEEVFSDMQPLVRSVLDGYNVCIFAY 477
Query: 476 GQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVR 535
GQTGSGKT+TMTGP+ELTE+S GVNYRAL+DLFL++ QRKD Y+++VQMLEIYNEQVR
Sbjct: 478 GQTGSGKTFTMTGPKELTEESLGVNYRALADLFLLSNQRKDTTSYEISVQMLEIYNEQVR 537
Query: 536 DLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRS 595
DLL DG +RLEIRN+S G+NVP+ASL+PVSST DVI LM+LG NRAV +TA+NDRS
Sbjct: 538 DLLAQDGQTKRLEIRNNSHNGINVPEASLVPVSSTDDVIQLMDLGHMNRAVSSTAMNDRS 597
Query: 596 SRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSAL 655
SRSHSC+TVHVQG+DLTSG++ G MHLVDLAGSERV+KSEVTGDRLKEAQHIN+SLSAL
Sbjct: 598 SRSHSCVTVHVQGRDLTSGSILHGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSAL 657
Query: 656 GDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAER 715
GDVI+SL+QK HVPYRNSKLTQLLQDSLGG AKTLMFVHISPEPD +GETISTLKFAER
Sbjct: 658 GDVISSLSQKTSHVPYRNSKLTQLLQDSLGGSAKTLMFVHISPEPDTLGETISTLKFAER 717
Query: 716 VATVELGAARVNKDSSDVKELKEQIASLKAALARKEGESEHNQYSMSGSSERYRTKPSEL 775
V +VELGAARVNKD+S+VKELKEQIA+LK AL RK ++ ++ + ER + S
Sbjct: 718 VGSVELGAARVNKDNSEVKELKEQIANLKMALVRKGNGNDVQPTAIPINRERISRRRSLE 777
Query: 776 SPFNSNQGVGEMLGDQNSYRQPVGDVGNIEVQTNSALRQKKQSFDLDELL-ANSPPWPPV 834
+P + M N+ R + D+ E +S ++ S D+ EL+ ++SP WP
Sbjct: 778 TP-TIRPKLPTMGNTSNNSRPQIMDLSGPEAFNDSTASSRRHSLDIHELMKSSSPAWPRQ 836
Query: 835 ISPGQHYGDDEKETGSGEWVDKVMVNKQDVVNRVENSLGCWETDNGHSPDVFYQKYLQDS 894
G+ D+++E+ SGEW+DK ++++ + N +SP+ FYQ +
Sbjct: 837 PLNGK---DEDRESKSGEWIDK----HEELI----------QNQNPNSPEQFYQSMVPQQ 879
Query: 895 SKIYPEQSYNMLMGNNRFNVATSDDLDDLDAATSDSSEPDLLW----QFNQSKFTSISNG 950
+Y G F V + D + +AATSD S+ DLLW Q N K ++I N
Sbjct: 880 QSLYG--------GKQDFEVQSITDNESDEAATSDCSDSDLLWRLSVQVNVPKVSNIQNS 931
Query: 951 IETKTRKQSLKSAKNPGIRSPNPKLGASPSRKLTNGVGAPLHRNGRQPKPTGAIG 1005
K +K ++AK RS P L +PS++ N V + R R K ++G
Sbjct: 932 ANPKPKKIQPRTAKLSETRSLIPSLIPAPSKRPPNTVNSQPQRPTRDGKRRLSLG 986
|
Microtubule-binding motor protein. Arabidopsis thaliana (taxid: 3702) |
| >sp|P46875|ATK3_ARATH Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P46864|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P79955|CTK2_XENLA Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|F4JGP4|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4 | Back alignment and function description |
|---|
| >sp|P28739|KLPA_EMENI Kinesin-like protein klpA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=klpA PE=2 SV=3 | Back alignment and function description |
|---|
| >sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4 | Back alignment and function description |
|---|
| >sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q5XI63|KIFC1_RAT Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1009 | ||||||
| 255564276 | 1012 | kinesin heavy chain, putative [Ricinus c | 0.991 | 0.988 | 0.801 | 0.0 | |
| 224068400 | 1003 | predicted protein [Populus trichocarpa] | 0.979 | 0.985 | 0.787 | 0.0 | |
| 127519339 | 1015 | kinesin-related protein [Gossypium hirsu | 0.992 | 0.986 | 0.796 | 0.0 | |
| 359479934 | 1011 | PREDICTED: kinesin-4-like [Vitis vinifer | 0.988 | 0.986 | 0.784 | 0.0 | |
| 297743934 | 1017 | unnamed protein product [Vitis vinifera] | 0.993 | 0.985 | 0.780 | 0.0 | |
| 147852751 | 1172 | hypothetical protein VITISV_024511 [Viti | 0.955 | 0.822 | 0.755 | 0.0 | |
| 224128434 | 957 | predicted protein [Populus trichocarpa] | 0.933 | 0.984 | 0.754 | 0.0 | |
| 356501886 | 1008 | PREDICTED: kinesin-4-like [Glycine max] | 0.982 | 0.983 | 0.757 | 0.0 | |
| 356570984 | 1011 | PREDICTED: kinesin-4-like [Glycine max] | 0.987 | 0.985 | 0.740 | 0.0 | |
| 449469054 | 1022 | PREDICTED: kinesin-4-like [Cucumis sativ | 0.990 | 0.977 | 0.745 | 0.0 |
| >gi|255564276|ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis] gi|223537697|gb|EEF39320.1| kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1679 bits (4348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/1017 (80%), Positives = 908/1017 (89%), Gaps = 17/1017 (1%)
Query: 1 MAGEG-RLSFSVASVVEDVLQQHGNRPRDLDLESRKAEEAASRRYEAAGWLRKMVGVVAA 59
MAGEG LSFSVASVVEDVLQQHGNR +DLDLESRKAEEAASRR EAAGWLRKMVGVVAA
Sbjct: 1 MAGEGGALSFSVASVVEDVLQQHGNRLKDLDLESRKAEEAASRRNEAAGWLRKMVGVVAA 60
Query: 60 RDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESP-DTVLVPDGAALSAYQYFE 118
+DLPAEPSEEEFRLGLRSGIILCN +NKVQPGAVPKVVESP D VL+PDGAALSA+QYFE
Sbjct: 61 KDLPAEPSEEEFRLGLRSGIILCNALNKVQPGAVPKVVESPCDAVLIPDGAALSAFQYFE 120
Query: 119 NVRNFLVAVQEMGLPTFEASDLEQGGKSARVVNCVLALKSYGEWKQTGGNGVWKFGGTIK 178
NVRNFLVAVQ++GLPTFEASDLEQGGKSARVVN VLALKSY EWKQTGGNGVWKFGG +K
Sbjct: 121 NVRNFLVAVQDIGLPTFEASDLEQGGKSARVVNSVLALKSYSEWKQTGGNGVWKFGGNMK 180
Query: 179 STSLGTKSFIRKNSEPFMNSLSRTSSINEKS-LNSHSDLDSNKMSSSGSFSMLVRAVLLD 237
++ TKSF+RKN+EPFMNSLSR SS+NE+S + +D+DSNKMS+SGS S LVRAVLLD
Sbjct: 181 -PAIPTKSFVRKNTEPFMNSLSRNSSMNERSSIALSADIDSNKMSTSGSLSTLVRAVLLD 239
Query: 238 KKPEEIPTVVESVLSKLVEEFEHRIASQYEQMKTAPYHV-----NKSLLKSAIVDKKGED 292
KKPEE+P +VESVLSK+VEEFE RIA+QY+ +KT P + NK KS +K+ E+
Sbjct: 240 KKPEEVPMLVESVLSKVVEEFEQRIANQYDLVKTHPKDMAISQGNKFPFKSTSGNKRAEE 299
Query: 293 KNVKGSKREECFQKNNISDEELKSQSLKQKMIFDQQHEDIQELKHTLHTTKAGIQFMQMK 352
+K K+EECFQKN+I DEELK+++LKQ+MIFDQQ +D+Q+LKH LHTTKAG+QFMQMK
Sbjct: 300 TTIKTMKKEECFQKNHIPDEELKNKNLKQQMIFDQQQKDVQDLKHALHTTKAGMQFMQMK 359
Query: 353 FHEEFSNLGIHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYL 412
FHEEFSNLG+HI GLAHAASGYH+VLEENRKLYNQVQDLKG+IRVYCRVRPFLSGQSN+L
Sbjct: 360 FHEEFSNLGMHIQGLAHAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLSGQSNFL 419
Query: 413 STVDHIEEGNITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGYNVCI 472
STVDH+E+GNI INTPS+HGKG K+FSFNKV+GPSATQAEVF DMQPLIRSVLDGYNVCI
Sbjct: 420 STVDHMEDGNIIINTPSRHGKGRKAFSFNKVFGPSATQAEVFFDMQPLIRSVLDGYNVCI 479
Query: 473 FAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNE 532
FAYGQTGSGKTYTMTGP++LTEK+ GVNYRALSDLFL+A QRKDIF Y+VAVQM+EIYNE
Sbjct: 480 FAYGQTGSGKTYTMTGPKDLTEKNLGVNYRALSDLFLLAAQRKDIFSYNVAVQMIEIYNE 539
Query: 533 QVRDLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALN 592
QVRDLLVTDG +IRNSSQTGLNVPDA+L+PVSST+DVI+LMNLG KNRAVG+TALN
Sbjct: 540 QVRDLLVTDG-----KIRNSSQTGLNVPDANLVPVSSTSDVIDLMNLGHKNRAVGSTALN 594
Query: 593 DRSSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSL 652
DRSSRSHSCLTVHVQG+DLTSGT+ RGCMHLVDLAGSERV+KSEVTGDRLKEAQHIN+SL
Sbjct: 595 DRSSRSHSCLTVHVQGRDLTSGTLLRGCMHLVDLAGSERVDKSEVTGDRLKEAQHINKSL 654
Query: 653 SALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKF 712
SALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDA+GETISTLKF
Sbjct: 655 SALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAIGETISTLKF 714
Query: 713 AERVATVELGAARVNKDSSDVKELKEQIASLKAALARKEGESEHNQYSMSGSSERYRTKP 772
AERVATVELGAARVNKD +DVKELKEQIASLKAALARKEGE E Q+S S +SERYR K
Sbjct: 715 AERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGEPEFAQHSASDNSERYRRKE 774
Query: 773 SELSPFNSNQGVGEMLGDQNSYRQPVGDVGNIEVQTNSALRQKKQSFDLDELLANSPPWP 832
+E SPFNSNQ +G+ D NS+RQP+GDVGNIEV T+S LR K+QSFDLDELLANSPPWP
Sbjct: 775 NESSPFNSNQRLGDA-NDANSFRQPMGDVGNIEVHTSSTLRPKRQSFDLDELLANSPPWP 833
Query: 833 PVISPGQHYGDDEKETGSGEWVDKVMVNKQDVVNRVENSLGCWETDNGHSPDVFYQKYLQ 892
PVISP ++YGDDEKE GSGEWVDKVMVNKQD VNR E+ LGCWE DNGH PDVFYQKYL
Sbjct: 834 PVISPNKNYGDDEKEMGSGEWVDKVMVNKQDAVNRAEDPLGCWEADNGHLPDVFYQKYLS 893
Query: 893 DSSKIYPEQSYNMLMGNNRFNVATSDDLDDLDAATSDSSEPDLLWQFNQSKFTSISNGIE 952
DSS+IYPEQSYNM GNNRFN++ +DD+DDLDA TSDSSEPDLLWQFNQSK + + GIE
Sbjct: 894 DSSRIYPEQSYNMFTGNNRFNMSNTDDIDDLDAGTSDSSEPDLLWQFNQSKLSGTAYGIE 953
Query: 953 TKTRKQSLKSAKNPGIRSPNPKLGASPSRKLTNGVGAPLHRNGRQPKPTGAIGKRKT 1009
+KT+K + K+ KN +R+ NP LG SPSRKL NGVG P HR+GRQP P KR+T
Sbjct: 954 SKTKKPNSKATKNSDLRNLNPMLGPSPSRKLPNGVGVPQHRSGRQPAPVDM--KRRT 1008
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224068400|ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|127519339|gb|ABO28522.1| kinesin-related protein [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|359479934|ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297743934|emb|CBI36904.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147852751|emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224128434|ref|XP_002320328.1| predicted protein [Populus trichocarpa] gi|222861101|gb|EEE98643.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356501886|ref|XP_003519754.1| PREDICTED: kinesin-4-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356570984|ref|XP_003553662.1| PREDICTED: kinesin-4-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449469054|ref|XP_004152236.1| PREDICTED: kinesin-4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1009 | ||||||
| TAIR|locus:2061992 | 983 | AT2G47500 [Arabidopsis thalian | 0.766 | 0.786 | 0.713 | 0.0 | |
| TAIR|locus:2148543 | 987 | ATK4 "kinesin 4" [Arabidopsis | 0.837 | 0.856 | 0.579 | 2.9e-262 | |
| TAIR|locus:2195316 | 1010 | AT1G09170 [Arabidopsis thalian | 0.298 | 0.298 | 0.636 | 2.9e-235 | |
| TAIR|locus:2101645 | 1087 | KP1 "kinesin-like protein 1" [ | 0.484 | 0.449 | 0.597 | 3e-192 | |
| TAIR|locus:2076289 | 922 | AT3G10310 [Arabidopsis thalian | 0.437 | 0.478 | 0.397 | 1.1e-146 | |
| TAIR|locus:2026639 | 1071 | AT1G63640 [Arabidopsis thalian | 0.439 | 0.413 | 0.583 | 1.8e-144 | |
| TAIR|locus:2027854 | 1025 | AT1G73860 [Arabidopsis thalian | 0.528 | 0.52 | 0.518 | 3.2e-136 | |
| TAIR|locus:2014129 | 1140 | AT1G18410 [Arabidopsis thalian | 0.509 | 0.450 | 0.529 | 7.1e-132 | |
| UNIPROTKB|F1RF39 | 877 | KIFC3 "Uncharacterized protein | 0.402 | 0.462 | 0.430 | 1.8e-76 | |
| TAIR|locus:2136437 | 745 | ATK2 "kinesin 2" [Arabidopsis | 0.409 | 0.554 | 0.404 | 6.3e-76 |
| TAIR|locus:2061992 AT2G47500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2813 (995.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 560/785 (71%), Positives = 642/785 (81%)
Query: 4 EGRLSFSVASVVEDVLQQHGNRPRDLDLXXXXXXXXXXXXXXXXGWLRKMVGVVAARDLP 63
+G LSF+VASV+EDVLQQHGN RD DL WLR+MVGVV A+DLP
Sbjct: 8 DGGLSFTVASVMEDVLQQHGNGLRDHDLVSRRAEEAASRRYEAANWLRRMVGVVGAKDLP 67
Query: 64 AEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESP-DTVLVPDGAALSAYQYFENVRN 122
AEP+EE RLGLRSGIILC V+NKVQPGAV KVVESP D +LV DGA LSA+QYFENVRN
Sbjct: 68 AEPTEEGLRLGLRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENVRN 127
Query: 123 FLVAVQEMGLPTFEASDLEQGGKSARVVNCVLALKSYGEWKQTGGNGVWKFGGTIKSTSL 182
FLVA+QEMG PTFEASDLEQGG ++RVVNCVLA+KSY EWKQ+GG GVWKFGG IK +L
Sbjct: 128 FLVAIQEMGFPTFEASDLEQGGNASRVVNCVLAIKSYDEWKQSGGIGVWKFGGNIKPPAL 187
Query: 183 GTKSFIRKNSEPFMNSLSRTSSINEKSLNSHSDLDXXXXXXXXXXXMLVRAVLLDKKPEE 242
G SF+RKNSEPFMNSLSRTSSIN + S +D + LVRAVL DKKPE+
Sbjct: 188 GKSSFVRKNSEPFMNSLSRTSSINNEKAPSENDSNKLSSPSSLST--LVRAVLSDKKPED 245
Query: 243 IPTXXXXXXXXXXXXXXHRIASQYEQMKTAPYHV-----NKSLLKSAIVDKKGEDKNVKG 297
+P +R+ +QYE ++ AP N+S LK + +++ E+K+ K
Sbjct: 246 VPKLIESLLSKVVEEFENRVTNQYELVRAAPRESTSSQNNRSFLKP-LGEREREEKSFKA 304
Query: 298 SKREECFQKNNISDEELKSQSLKQKMIFDQQHEDIQELKHTLHTTKAGIQFMQMKFHEEF 357
K+++ + I DE++K++ KQ IF+QQ EDI+ L+ TL+TT+AG+QFMQ KF EEF
Sbjct: 305 IKKDD--HNSQILDEKMKTRQFKQLTIFNQQQEDIEGLRQTLYTTRAGMQFMQKKFQEEF 362
Query: 358 SNLGIHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLSTVDH 417
S+LG+H+HGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFL GQS++ ST+ +
Sbjct: 363 SSLGMHVHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGQSSFSSTIGN 422
Query: 418 IEEGNITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQ 477
+E+ I INT S+HGK KSF+FNKV+GPSATQ EVFSDMQPLIRSVLDGYNVCIFAYGQ
Sbjct: 423 MEDDTIGINTASRHGKSLKSFTFNKVFGPSATQEEVFSDMQPLIRSVLDGYNVCIFAYGQ 482
Query: 478 TGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVRDL 537
TGSGKT+TM+GPR+LTEKSQGVNYRAL DLFL+AEQRKD FRYD+AVQM+EIYNEQVRDL
Sbjct: 483 TGSGKTFTMSGPRDLTEKSQGVNYRALGDLFLLAEQRKDTFRYDIAVQMIEIYNEQVRDL 542
Query: 538 LVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSR 597
LVTDGSN+RLEIRNSSQ GL+VPDASL+PVSST DVI+LM G KNRAVG+TALNDRSSR
Sbjct: 543 LVTDGSNKRLEIRNSSQKGLSVPDASLVPVSSTFDVIDLMKTGHKNRAVGSTALNDRSSR 602
Query: 598 SHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGD 657
SHSCLTVHVQG+DLTSG + RGCMHLVDLAGSERV+KSEVTGDRLKEAQHINRSLSALGD
Sbjct: 603 SHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEVTGDRLKEAQHINRSLSALGD 662
Query: 658 VIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVA 717
VIASLA KNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPE DAVGETISTLKFAERVA
Sbjct: 663 VIASLAHKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADAVGETISTLKFAERVA 722
Query: 718 TVELGAARVNKDSSDVKELKEQIASLKAALARKEGESEHNQYSMS-GSSERYRTKPSELS 776
TVELGAARVN D+SDVKELKEQIA+LKAALARKE ES+ N + G SE+++ K E+
Sbjct: 723 TVELGAARVNNDTSDVKELKEQIATLKAALARKEAESQQNNILKTPGGSEKHKAKTGEVE 782
Query: 777 PFNSN 781
N+N
Sbjct: 783 IHNNN 787
|
|
| TAIR|locus:2148543 ATK4 "kinesin 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195316 AT1G09170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2101645 KP1 "kinesin-like protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2076289 AT3G10310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2026639 AT1G63640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027854 AT1G73860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014129 AT1G18410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RF39 KIFC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136437 ATK2 "kinesin 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | estExt_fgenesh4_pg.C_LG_II1760 | hypothetical protein (1003 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1009 | |||
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-170 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-142 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-138 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-124 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 7e-98 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 4e-97 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 2e-96 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 4e-93 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-89 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 2e-87 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 5e-85 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 2e-79 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 4e-76 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 4e-74 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 4e-73 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 6e-72 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 9e-67 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 1e-60 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 4e-45 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 2e-10 | |
| smart00033 | 101 | smart00033, CH, Calponin homology domain | 8e-10 | |
| pfam00307 | 104 | pfam00307, CH, Calponin homology (CH) domain | 2e-08 | |
| cd00014 | 107 | cd00014, CH, Calponin homology domain; actin-bindi | 9e-08 | |
| COG5261 | 1054 | COG5261, IQG1, Protein involved in regulation of c | 6e-05 |
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
Score = 500 bits (1289), Expect = e-170
Identities = 181/334 (54%), Positives = 237/334 (70%), Gaps = 8/334 (2%)
Query: 392 KGSIRVYCRVRPFL-SGQSNYLSTVDHIEEGNITINTPSKHGKGWKSFSFNKVYGPSATQ 450
KG+IRV+CRVRP L S + Y S + +E TI GK KSFSF++V+ P A+Q
Sbjct: 1 KGNIRVFCRVRPLLPSESTEYSSVISFPDEDGGTIELSKGTGKK-KSFSFDRVFDPDASQ 59
Query: 451 AEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLI 510
+VF ++ PL++S LDGYNVCIFAYGQTGSGKTYTM GP E + G+ RAL LF
Sbjct: 60 EDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGPPE----NPGIIPRALEQLFNT 115
Query: 511 AEQRKDI-FRYDVAVQMLEIYNEQVRDLLVTDGSNR-RLEIRNSSQTGLNVPDASLIPVS 568
AE+ K+ + Y + MLEIYNE +RDLL T + + +LEI++ S+ V + + +PVS
Sbjct: 116 AEELKEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIKHDSKGETYVTNLTEVPVS 175
Query: 569 STADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAG 628
S +V L+NLG KNR+V +T +N+ SSRSH+ + ++G +L +G RG ++LVDLAG
Sbjct: 176 SPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLVDLAG 235
Query: 629 SERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQA 688
SER+ KS TGDRLKEAQ IN+SLSALGDVI++L K+ HVPYRNSKLT LLQDSLGG +
Sbjct: 236 SERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGNS 295
Query: 689 KTLMFVHISPEPDAVGETISTLKFAERVATVELG 722
KTLMFV+ISP + ET+ +L+FA RV +VELG
Sbjct: 296 KTLMFVNISPLESNLSETLCSLRFASRVRSVELG 329
|
Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|214479 smart00033, CH, Calponin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|215849 pfam00307, CH, Calponin homology (CH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|237981 cd00014, CH, Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity) | Back alignment and domain information |
|---|
| >gnl|CDD|227586 COG5261, IQG1, Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1009 | |||
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| KOG2046 | 193 | consensus Calponin [Cytoskeleton] | 99.91 | |
| COG5199 | 178 | SCP1 Calponin [Cytoskeleton] | 99.72 | |
| cd00014 | 107 | CH Calponin homology domain; actin-binding domain | 99.58 | |
| COG5261 | 1054 | IQG1 Protein involved in regulation of cellular mo | 99.5 | |
| smart00033 | 103 | CH Calponin homology domain. Actin binding domains | 99.46 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 99.46 | |
| KOG2996 | 865 | consensus Rho guanine nucleotide exchange factor V | 99.45 | |
| PF00307 | 108 | CH: Calponin homology (CH) domain; InterPro: IPR00 | 99.35 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.31 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 99.03 | |
| PF11971 | 85 | CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 T | 97.78 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 97.45 | |
| PF06395 | 89 | CDC24: CDC24 Calponin; InterPro: IPR010481 This is | 96.98 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 93.55 | |
| TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family. Many pro | 93.0 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 91.62 | |
| PRK03992 | 389 | proteasome-activating nucleotidase; Provisional | 90.94 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 89.81 | |
| COG5069 | 612 | SAC6 Ca2+-binding actin-bundling protein fimbrin/p | 88.01 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 87.59 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 87.27 | |
| PRK06620 | 214 | hypothetical protein; Validated | 87.11 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 87.11 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.94 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 85.92 | |
| PRK08116 | 268 | hypothetical protein; Validated | 85.9 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 85.49 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 85.02 | |
| PTZ00454 | 398 | 26S protease regulatory subunit 6B-like protein; P | 84.84 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 84.35 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 84.28 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 84.08 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 83.31 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 82.56 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 82.46 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 82.25 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 81.65 | |
| PRK09087 | 226 | hypothetical protein; Validated | 81.38 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 80.97 | |
| KOG0517 | 2473 | consensus Beta-spectrin [Cytoskeleton] | 80.4 |
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-92 Score=839.20 Aligned_cols=425 Identities=48% Similarity=0.717 Sum_probs=396.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhhhhHHH---HHHhhhhhhhhccCCCeEE
Q 001820 321 QKMIFDQQHEDIQELKHTLHTTKAGIQFMQMKFHEEFSNLGIHIHGLAHAASGYHRVL---EENRKLYNQVQDLKGSIRV 397 (1009)
Q Consensus 321 ~~~~~~~~~~~~~~l~~~l~~~k~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~---~e~r~l~n~~qelkGnIrV 397 (1009)
.+..++.++.++++|+..+..++..+..++..+++.+..+...+..|+.+...|+... ++||+|||+++||||||||
T Consensus 239 ~~~~i~~l~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~e~~~r~kL~N~i~eLkGnIRV 318 (670)
T KOG0239|consen 239 IKKKIQALQQELEELKAELKELNDQVSLLTREVQEALKESNTLQSDLESLEENLVEKKKEKEERRKLHNEILELKGNIRV 318 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceE
Confidence 3344889999999999999999999999999999999999999999999988888777 8999999999999999999
Q ss_pred EEEeCCCCCCCCCC-CcceEeecC-CeEEEeCCCCCCC-CceeEEeceeeCCCCChHhHHhhhHHHHHHHhcCCceeEEe
Q 001820 398 YCRVRPFLSGQSNY-LSTVDHIEE-GNITINTPSKHGK-GWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGYNVCIFA 474 (1009)
Q Consensus 398 ~~RVRP~~~~E~~~-~~~v~~~~~-~~i~v~~p~~~gk-~~k~F~FD~VF~~~atQeeVF~~v~pLV~svLdG~N~~IfA 474 (1009)
||||||+++++... ...+...++ +.+.+..|....+ ..+.|.||+||+|.++|++||.++.|+|+++|||||+||||
T Consensus 319 ~CRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fdkVf~p~~sQ~~VF~e~~~lv~S~lDGYnVCIFA 398 (670)
T KOG0239|consen 319 FCRVRPLLPSEKQRLQSKVIDTEEQGEVQVDSPDKGDKLEPQSFKFDKVFGPLASQDDVFEEVSPLVQSALDGYNVCIFA 398 (670)
T ss_pred EEEecCCCccccccccccccccCCcceeEeecCCCCCCCccccceeeeecCCcccHHHHHHHHHHHHHHHhcCcceeEEE
Confidence 99999999988773 344555544 5788888877665 34569999999999999999999999999999999999999
Q ss_pred ecccCCCCceeecCCCCCCccccchhhHHHHHHHHHHHHhccceeEEEEEEEEEEecceeeecccCCCCCcccccccCCC
Q 001820 475 YGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVRDLLVTDGSNRRLEIRNSSQ 554 (1009)
Q Consensus 475 YGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~y~V~vS~lEIYnE~V~DLL~~~~~~~~L~Ire~~~ 554 (1009)
||||||||||||.|| ++.++|||||++++||..+......|.|.+.++|+|||||.|+|||.+......+.|+++..
T Consensus 399 YGQTGSGKTyTM~G~---~~~~~Giipral~~lF~~~~~~~~g~~y~~~~s~~EIYNe~i~DlL~~~~~~~k~~I~~~~~ 475 (670)
T KOG0239|consen 399 YGQTGSGKTYTMSGP---TPEDPGIIPRALEKLFRTITSLKSGWKYDKTVSMLEIYNEAIRDLLSDESYVGKLEIVDDAE 475 (670)
T ss_pred ecccCCCccccccCC---CcccCCccHHHHHHHHHHHHhhccCceEEeeeehhHHHHHHHHHhccccccccceeEEEcCC
Confidence 999999999999997 45689999999999999999988899999999999999999999997765567899999999
Q ss_pred CCccCCCCeEEEeCCHHHHHHHHHhhhcccccccccccCCCCCCceEEEEEEeeeecCCCceEEEEEEEEeccCCccccC
Q 001820 555 TGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNK 634 (1009)
Q Consensus 555 ~g~~V~glt~v~V~S~eev~~lL~~G~~nR~vasT~~N~~SSRSH~IftI~V~~~~~~~~~~~~s~L~LVDLAGSER~~~ 634 (1009)
++.+|++++.+.|.+.+++..+|+.|..||++++|++|++|||||+||+|+|.+.+..++....|+|+|||||||||+++
T Consensus 476 ~~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~~~~t~~~~~g~l~LVDLAGSER~~~ 555 (670)
T KOG0239|consen 476 GNLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGINELTGIRVTGVLNLVDLAGSERVSK 555 (670)
T ss_pred CceecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEeccccCcccccccceeEeecccCcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhhhhcCCCceeeEEEecCCCCCcHHHHHHHHHHHH
Q 001820 635 SEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAE 714 (1009)
Q Consensus 635 s~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETlsTLrFA~ 714 (1009)
++++|+|++|+++||+||++||+||.||++++.||||||||||+|||++|||++||+|||+|||...++.||+++|+||+
T Consensus 556 s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKLT~lLq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~ 635 (670)
T KOG0239|consen 556 SGVTGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKLTQLLQDSLGGDSKTLMFVNISPAAAALFETLCSLRFAT 635 (670)
T ss_pred CCCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccchHHHhHhhhCCccceeeEEEeCccHHHHhhhhhccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccCcccccCChHHHHHHHHHHHHHHHHHH
Q 001820 715 RVATVELGAARVNKDSSDVKELKEQIASLKAALA 748 (1009)
Q Consensus 715 Rak~I~~~~~~vn~~~~~i~~L~eeI~~Lk~~L~ 748 (1009)
||+.+++|+++.+.+..+...++..+..++...+
T Consensus 636 rv~~~~lG~a~~~~~~~~~~~~~~~~~~~~~~~~ 669 (670)
T KOG0239|consen 636 RVRSVELGSARKQVSTSDDVSLKRFGQLEKLSTA 669 (670)
T ss_pred Hhhceecccccccccccchhhhhhhhhhhhhhhc
Confidence 9999999999999999988888888887776543
|
|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG2046 consensus Calponin [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5199 SCP1 Calponin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity) | Back alignment and domain information |
|---|
| >COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00033 CH Calponin homology domain | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins [] | Back alignment and domain information |
|---|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins | Back alignment and domain information |
|---|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR01242 26Sp45 26S proteasome subunit P45 family | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK03992 proteasome-activating nucleotidase; Provisional | Back alignment and domain information |
|---|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >KOG0517 consensus Beta-spectrin [Cytoskeleton] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1009 | ||||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 3e-75 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 1e-73 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 2e-72 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 2e-68 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 3e-68 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 2e-67 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 2e-67 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-67 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 3e-67 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 6e-67 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 1e-66 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 3e-66 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 3e-64 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 2e-63 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-63 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-63 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 5e-63 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-63 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 2e-60 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-57 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 4e-56 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 4e-55 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 1e-54 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 2e-54 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 8e-54 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-53 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-52 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 1e-51 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-51 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-51 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-51 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-51 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-51 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 3e-51 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 7e-51 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 3e-49 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 4e-49 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-48 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 6e-48 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 7e-48 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 7e-48 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 8e-48 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 8e-48 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 8e-48 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 8e-48 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 2e-47 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-44 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 7e-40 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 7e-39 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 2e-38 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 9e-37 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 1e-36 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 1e-36 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 2e-31 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 3e-29 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 5e-26 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 1e-13 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 8e-13 | ||
| 1wyp_A | 136 | Solution Structure Of The Ch Domain Of Human Calpon | 1e-08 | ||
| 1wyn_A | 146 | Solution Structure Of The Ch Domain Of Human Calpon | 3e-08 | ||
| 1h67_A | 108 | Nmr Structure Of The Ch Domain Of Calponin Length = | 2e-07 | ||
| 1wyr_A | 121 | Solution Structure Of The Ch Domain Of Human Rho Gu | 3e-04 | ||
| 1p5s_A | 203 | Structure And Function Of The Calponin-Homology Dom | 7e-04 | ||
| 1p2x_A | 159 | Crystal Structure Of The Calponin-Homology Domain O | 7e-04 |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
|
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|1WYP|A Chain A, Solution Structure Of The Ch Domain Of Human Calponin 1 Length = 136 | Back alignment and structure |
| >pdb|1WYN|A Chain A, Solution Structure Of The Ch Domain Of Human Calponin-2 Length = 146 | Back alignment and structure |
| >pdb|1H67|A Chain A, Nmr Structure Of The Ch Domain Of Calponin Length = 108 | Back alignment and structure |
| >pdb|1WYR|A Chain A, Solution Structure Of The Ch Domain Of Human Rho Guanine Nucleotide Exchange Factor 6 Length = 121 | Back alignment and structure |
| >pdb|1P5S|A Chain A, Structure And Function Of The Calponin-Homology Domain Of An Iqgap Protein From Schizosaccharomyces Pombe Length = 203 | Back alignment and structure |
| >pdb|1P2X|A Chain A, Crystal Structure Of The Calponin-Homology Domain Of Rng2 From Schizosaccharomyces Pombe Length = 159 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
Score = 589 bits (1521), Expect = 0.0
Identities = 144/420 (34%), Positives = 229/420 (54%), Gaps = 13/420 (3%)
Query: 335 LKHTLHTTKAGIQFMQMKFHEEFSNLGIHIHGLAHAASGYHRVLEENRKLYNQVQDLKGS 394
+ + ++ + E L + E ++L+N V DL+ +
Sbjct: 1 MGSMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDN 60
Query: 395 IRVYCRVRPFLSGQSNY-LSTVDHIEEGNITI---NTPSKHGKGWKSFSFNKVYGPSATQ 450
IRV+CR+RP L + N T + +E + + + +K G + FSF++V+ P ++Q
Sbjct: 61 IRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQ 120
Query: 451 AEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLF-L 509
+++F + PLI+S LDGYN+CIFAYGQTGSGKTYTM G E S GV R + LF
Sbjct: 121 SDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPE----SVGVIPRTVDLLFDS 176
Query: 510 IAEQRKDIFRYDVAVQMLEIYNEQVRDLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSS 569
I R + Y++ LEIYNE + DLL + + + + +++ + V + + V
Sbjct: 177 IRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLD 236
Query: 570 TADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGS 629
+ +LM+ + NRA +TA N+RSSRSH+ + + G+ + G ++LVDLAGS
Sbjct: 237 PNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGS 296
Query: 630 ERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAK 689
E T R+ E ++INRSLS L +VI +L QK H+PYRNSKLT LL SLGG +K
Sbjct: 297 ES----PKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 352
Query: 690 TLMFVHISPEPDAVGETISTLKFAERVATVELGAARVNKDSSDVKELKEQIASLKAALAR 749
TLMF+++SP D E++ +L+FA V + ++ A+ N+ ++ ++ + +
Sbjct: 353 TLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNNSVANSSTQSNNSGSFDK 412
|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1 Length = 108 | Back alignment and structure |
|---|
| >1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1 Length = 144 | Back alignment and structure |
|---|
| >2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens} Length = 190 | Back alignment and structure |
|---|
| >1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1 Length = 203 | Back alignment and structure |
|---|
| >1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1 Length = 159 | Back alignment and structure |
|---|
| >1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 136 | Back alignment and structure |
|---|
| >3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
| >1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
| >2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 146 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1009 | ||||
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 5e-88 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 2e-86 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 5e-85 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 5e-84 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-80 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 3e-78 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 3e-77 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 1e-76 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 3e-73 | |
| d1ujoa_ | 144 | a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [Ta | 2e-24 | |
| d1h67a_ | 108 | a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [T | 3e-24 | |
| d1p2xa_ | 159 | a.40.1.1 (A:) Ras GTPase-activating-like protein r | 4e-16 |
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 284 bits (728), Expect = 5e-88
Identities = 139/355 (39%), Positives = 211/355 (59%), Gaps = 13/355 (3%)
Query: 367 LAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLS-TVDHIEEGNITI 425
L + E ++L+N V DL+G+IRV+CR+RP L + N + T + +E + +
Sbjct: 19 LETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVEL 78
Query: 426 NTPSKHGK---GWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGK 482
+ K G + FSF++V+ P ++Q+++F + PLI+S LDGYN+CIFAYGQTGSGK
Sbjct: 79 QSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGK 138
Query: 483 TYTMTGPRELTEKSQGVNYRALSDLF-LIAEQRKDIFRYDVAVQMLEIYNEQVRDLLVTD 541
TYTM G +S GV R + LF I R + Y++ LEIYNE + DLL +
Sbjct: 139 TYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNE 194
Query: 542 GSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSC 601
+ + + +++ + V + + V + +LM+ + NRA +TA N+RSSRSH+
Sbjct: 195 QKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAV 254
Query: 602 LTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIAS 661
+ + G+ + G ++LVDLA ++S T R+ E ++INRSLS L +VI +
Sbjct: 255 TKLELIGRHAEKQEISVGSINLVDLA----GSESPKTSTRMTETKNINRSLSELTNVILA 310
Query: 662 LAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERV 716
L QK H+PYRNSKLT LL SLGG +KTLMF+++SP D E++ +L+FA V
Sbjct: 311 LLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASV 365
|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ujoa_ a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [TaxId: 10090]} Length = 144 | Back information, alignment and structure |
|---|
| >d1h67a_ a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 108 | Back information, alignment and structure |
|---|
| >d1p2xa_ a.40.1.1 (A:) Ras GTPase-activating-like protein rng2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 159 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1009 | |||
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1ujoa_ | 144 | Transgelin {Mouse (Mus musculus) [TaxId: 10090]} | 99.95 | |
| d1h67a_ | 108 | Calponin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.94 | |
| d1p2xa_ | 159 | Ras GTPase-activating-like protein rng2 {Fission y | 99.92 | |
| d1aoaa1 | 131 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.83 | |
| d1sh5a1 | 120 | Actin binding domain of plectin {Human (Homo sapie | 98.51 | |
| d1wjoa_ | 124 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.48 | |
| d1pxya_ | 500 | Fimbrin (Plastin), actin-crosslinking domain {Thal | 98.43 | |
| d1aoaa2 | 116 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.13 | |
| d1rt8a_ | 505 | Fimbrin (Plastin), actin-crosslinking domain {Fiss | 98.06 | |
| d2qjza1 | 120 | Microtubule-associated protein eb1, N-terminal mic | 98.05 | |
| d1rt8a_ | 505 | Fimbrin (Plastin), actin-crosslinking domain {Fiss | 97.98 | |
| d1dxxa1 | 111 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 97.97 | |
| d1pxya_ | 500 | Fimbrin (Plastin), actin-crosslinking domain {Thal | 97.54 | |
| d1dxxa2 | 127 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 97.11 | |
| d1bhda_ | 108 | Utrophin {Human (Homo sapiens) [TaxId: 9606]} | 96.94 | |
| d1bkra_ | 108 | beta-spectrin {Human (Homo sapiens) [TaxId: 9606]} | 96.92 | |
| d1sh5a2 | 110 | Actin binding domain of plectin {Human (Homo sapie | 96.88 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 94.1 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 88.81 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 86.79 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 86.04 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 84.21 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 84.08 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 82.72 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 82.16 |
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=654.77 Aligned_cols=333 Identities=41% Similarity=0.660 Sum_probs=302.9
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC-EEEECCCEEEEECCCCC---CCCCEEEEECEEECCCCCHHHHH
Q ss_conf 987555333111699869999919999998888753-67415993999479999---99842488021409998867699
Q 001820 379 EENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLST-VDHIEEGNITINTPSKH---GKGWKSFSFNKVYGPSATQAEVF 454 (1009)
Q Consensus 379 ~e~r~l~n~~qelkG~IrV~vRVRP~~~~E~~~~~~-v~~~~~~~i~i~~p~~~---gk~~k~F~FD~VF~~~atQeeVF 454 (1009)
.+||+|||++.|+||||||||||||+.+.|...... +...++..+.+..+... ....+.|.||+||+++++|++||
T Consensus 31 ~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy 110 (368)
T d2ncda_ 31 MERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIF 110 (368)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEECSCHHHHTTTCCCEEECSEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEECCEEECCCCCCCCHH
T ss_conf 99999874899756997999990789901027898579957998699706886556776864667785879999862149
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEECCE
Q ss_conf 606999999746874018731256989861425999987332222467999999999871-2650699999999995461
Q 001820 455 SDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQR-KDIFRYDVAVQMLEIYNEQ 533 (1009)
Q Consensus 455 ~~v~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~-~~~~~~~V~vS~lEIYnE~ 533 (1009)
+.+.|+|+++++|||+||||||||||||||||+|+ ...+||+||++++||..+... ...+.|.|.+||+|||||+
T Consensus 111 ~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~----~~~~Giipr~~~~Lf~~~~~~~~~~~~~~v~vS~~EIyne~ 186 (368)
T d2ncda_ 111 EMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEV 186 (368)
T ss_dssp TTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEE----TTEECHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSSC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCC----CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCE
T ss_conf 99998898775036513773115787560671366----64434466799987645443202455526899999886560
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 33234677888643010479997347999299807988999998711014653344565788897328999996555599
Q 001820 534 VRDLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTS 613 (1009)
Q Consensus 534 V~DLL~~~~~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~~~ 613 (1009)
|+|||.+........+++++.+++++.|++++.|.+.+++..++..|.++|.+++|.+|.+|||||+||+|++.......
T Consensus 187 i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrSh~i~~i~v~~~~~~~ 266 (368)
T d2ncda_ 187 LYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK 266 (368)
T ss_dssp EEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTCEEEEEEEEEEECTTS
T ss_pred EECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 20125642135431130266644233443022047778899999998751124422146545554327899999976698
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
Q ss_conf 94689988988526884345775413449999898797999999999972189997788865468644204999404579
Q 001820 614 GTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMF 693 (1009)
Q Consensus 614 ~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI 693 (1009)
+....|+|+||||||+|+.. .+++++|+.+||+||++|++||.+|++++.|||||+||||+||+|+|||||+|+||
T Consensus 267 ~~~~~s~l~~VDLAGse~~~----~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~SkLT~lL~dsLggns~t~mI 342 (368)
T d2ncda_ 267 QEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMF 342 (368)
T ss_dssp CCEEEEEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGSSSSCEEEEE
T ss_pred CCEEEEEEEEEEECCCCCCC----HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
T ss_conf 85676544442201023310----23210245520264999999999986589989975788899989855998709999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 83299988679879999999986123
Q 001820 694 VHISPEPDAVGETISTLKFAERVATV 719 (1009)
Q Consensus 694 ~~ISP~~~~~~ETLsTLrFA~Rvk~V 719 (1009)
+||||+..+++||++||+||+||+.+
T Consensus 343 ~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 343 INVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99798735499999999999997569
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1ujoa_ a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1h67a_ a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1p2xa_ a.40.1.1 (A:) Ras GTPase-activating-like protein rng2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1aoaa1 a.40.1.1 (A:121-251) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sh5a1 a.40.1.1 (A:8-127) Actin binding domain of plectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjoa_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pxya_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1aoaa2 a.40.1.1 (A:260-375) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rt8a_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2qjza1 a.40.1.1 (A:13-132) Microtubule-associated protein eb1, N-terminal microtubule binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rt8a_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pxya_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1dxxa2 a.40.1.1 (A:120-246) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bhda_ a.40.1.1 (A:) Utrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bkra_ a.40.1.1 (A:) beta-spectrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sh5a2 a.40.1.1 (A:128-237) Actin binding domain of plectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|