Citrus Sinensis ID: 001826

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------101
MTGLLRKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
cccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccHHHHHHHHccccccccccccccccccccccccccccccccEEEcccccccccccccccccEEEEEEHHHHcccccccccccccccccccccccHHHHHHHHHccccccHHHcHHHHHHHHHHHHcccccccccccccccccccccHHEccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccEEEcHHHHHHHHHccccccccccEEEEccccEEEEEEEEEccEEEEEEccccEEEEEEcccccccccccccccEEEEEEccEEEEEEcEEEEccEEEEEEEEEccccccccccEEEEEEcHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHccccccccccccccEEEEEEccccccccccccccccccccEEEccccccccccccccEEEEEcccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccc
cccccccccccHHHccccccccHHHccccHcccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccEEEcccccccccccHHHHEcccccccccEEEcccccccccccccEEcccHHEEEcccccccHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHcEEEEEEcccHHccccccHHHHHHHHccccHHHEEEcccccccHHcccccccccccEEEEEcccccccccccccccccEEEEEHHHEHHEccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHEEEEHcccccccHHHHHHHHHccccEcHHHHHHHHHHHHHHHHHcccccccccEEEEHHHHHHHHHccccccccccccccccccEEEEEEEEEcccEEEEccccccEEEEEccccEEEcccccEcccEEEEEcccEEEEEEEEEEccEEEEEEEEEEccEEEEcccEEEEEEcHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccHcEEEccccccccHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHcccHEEEcccccccEEEEEEcccHHHHHcccccccHcccEEEEccccEEccccccccEEEEEHHHHHHcEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEEcHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEccHHHHHccccHHHHHHHHHHHccccccccccccHHcccccccccEEcccHHHHHHHHHHHHHHHHcc
mtgllrktetaSFVATARVLLNPSLTLAVTNHHHSLISRFSAsavaampgadpqvvewpatkvrDTFFKFfedknhvnwksspvvpvndptllfanagmnqykpiflgtadpntqlsklTRACNTqkciraggkhndlddvgkdtYHHTFFEMlgnwsfgdyfkNEAIEWAWELLTKVYrlpadrlyatyfggdekaglapdneARDIWLKflpasrvlpfgckdnfwemgdtgpcgpcseihydrtgnrdaaslvnnddptciEIWNIVFIQfnresdgslkplpakhvdtglgFERLTSILQNkmsnydtdvfMPIFDAIQqatgarpysgkvgaddadkvDMAYRVVADHIRTLSFAiadgscpgnegrEYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGkvlsgqdafilwdtygfpldLTQLMAEERGLLVDIEGFNNAMDEARERSRSAqnkqaggaivMDADATAALHkrgvlatddsfkfiwFQDHKSVIKAIYTGsefiesvvpgnEVGIVLASSSfyaeqggqifdegFIEGLFGSFYVRNVQIYGGFVIHIgsltegagrfsvgeEVICKvdydrrkliapnhtCTHMLNFALREVlgdhvdqkgsvvlpeklrfdfshgkpvdpehLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLravfgevypdpvrVVAIGRKVedlladpenkEWLSISAelcggthlsnTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKvdgaaipapkkADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEaaasngkpfciSRVEVGLDAAAVREAVLKVIEQkgmpvmvfstdettnkavvcagvpeksdqskqLEVSEWLTAALQPlkgrcgkgkgglasgqvsgfymgykyklpksCILCLLVSYLLQKSL
mtgllrktetasfvATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDknhvnwksspvvpvNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCiraggkhndlddVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSfaiadgscpgneGREYVLRRILRRAVRYGSEvlkaqdgffnGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVlpeklrfdfshgkpvdpehLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVAslkskvdgaaipapkkaDIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAeaaasngkpfcISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPeksdqskqlEVSEWLTAALQPLkgrcgkgkgglASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
MTGLLRKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQreahireiiaaeeaSFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQkavkvatetaeaaaSNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLkgrcgkgkggLASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
**********ASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES***L*PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFN********************AIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV**********************************IRAKIALL*********************************GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGV***********VSEWLTAALQPLKGRCGKGKGGLASGQVSGFYMGYKYKLPKSCILCLLVSYLL****
**************ATARVLLNPSL*************************************VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNN**********************MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA*KI*GSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQ*****************************ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
********ETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDE**************GAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQ*********EENLQKA*************NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGV**********EVSEWLTAALQPLKGRCGKGKGGLASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
*****RKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSAS*************EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC****GGL*******FYMGYKYKLPKSCILCLLVSYLLQKSL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTGLLRKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDxxxxxxxxxxxxxxxxxxxxxQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVxxxxxxxxxxxxxxxxxxxxxCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKxxxxxxxxxxxxxxxxxxxxxxxxxxxxKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQVSGFYMGYKYKLPKSCILCLLVSYLLQKSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1009 2.2.26 [Sep-21-2011]
P364281003 Alanine--tRNA ligase OS=A yes no 0.926 0.932 0.809 0.0
Q5A8K2969 Alanine--tRNA ligase OS=C N/A no 0.924 0.962 0.495 0.0
Q54Y20946 Alanine--tRNA ligase, cyt yes no 0.892 0.952 0.512 0.0
P40825983 Alanine--tRNA ligase, mit yes no 0.869 0.892 0.518 0.0
Q5RC02968 Alanine--tRNA ligase, cyt yes no 0.903 0.942 0.492 0.0
Q8CFX8968 Alanine--tRNA ligase, cyt N/A no 0.902 0.941 0.493 0.0
P50475968 Alanine--tRNA ligase, cyt yes no 0.902 0.941 0.493 0.0
Q8BGQ7968 Alanine--tRNA ligase, cyt yes no 0.902 0.941 0.493 0.0
P49588968 Alanine--tRNA ligase, cyt yes no 0.903 0.942 0.492 0.0
O13914959 Alanine--tRNA ligase OS=S yes no 0.908 0.956 0.493 0.0
>sp|P36428|SYA_ARATH Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3 Back     alignment and function desciption
 Score = 1545 bits (4001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 757/935 (80%), Positives = 839/935 (89%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           VA MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKP
Sbjct: 46  VAVMPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKP 105

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 106 IFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 165

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
            EAIEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RVLPFGCK
Sbjct: 166 KEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCK 225

Query: 225 DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
           DNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKP
Sbjct: 226 DNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKP 285

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VD
Sbjct: 286 LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVD 345

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
           MAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ 
Sbjct: 346 MAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSS 405

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           V++VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFI
Sbjct: 406 VIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFI 465

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           LWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ 
Sbjct: 466 LWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATST 525

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQ
Sbjct: 526 LHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           IFD G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPN
Sbjct: 586 IFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPN 645

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK E
Sbjct: 646 HTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDE 705

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           LDVFSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW  +S+E C
Sbjct: 706 LDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFC 765

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS
Sbjct: 766 GGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGS 825

Query: 825 LLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETA 884
            LEK V++LKS+VD A IPA KKADIR KIA LQN+VRKAQKK+AE+NL+K+VK+ATE A
Sbjct: 826 ALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAA 885

Query: 885 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 944
           E+AAS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEK
Sbjct: 886 ESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEK 945

Query: 945 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 979
           SDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQ
Sbjct: 946 SDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQ 980
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q5A8K2|SYA_CANAL Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALA1 PE=1 SV=1 Back     alignment and function description
>sp|Q54Y20|SYAC_DICDI Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=alaS PE=2 SV=1 Back     alignment and function description
>sp|P40825|SYA_YEAST Alanine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALA1 PE=1 SV=3 Back     alignment and function description
>sp|Q5RC02|SYAC_PONAB Alanine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1 Back     alignment and function description
>sp|Q8CFX8|SYAC_MESAU Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=Aars PE=2 SV=1 Back     alignment and function description
>sp|P50475|SYAC_RAT Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Aars PE=1 SV=3 Back     alignment and function description
>sp|Q8BGQ7|SYAC_MOUSE Alanine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Aars PE=1 SV=1 Back     alignment and function description
>sp|P49588|SYAC_HUMAN Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2 Back     alignment and function description
>sp|O13914|SYA_SCHPO Alanine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ala1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1009
2555806221025 alanyl-tRNA synthetase, putative [Ricinu 0.926 0.912 0.848 0.0
2254237791002 PREDICTED: alanyl-tRNA synthetase-like [ 0.936 0.943 0.845 0.0
449461691956 PREDICTED: alanine--tRNA ligase-like [Cu 0.923 0.974 0.835 0.0
449508396956 PREDICTED: LOW QUALITY PROTEIN: alanine- 0.923 0.974 0.833 0.0
297737260960 unnamed protein product [Vitis vinifera] 0.923 0.970 0.840 0.0
306947351003 Alanyl-tRNA synthetase [Arabidopsis thal 0.926 0.932 0.809 0.0
297852712955 cytosolic tRNA-Ala synthetase [Arabidops 0.923 0.975 0.811 0.0
5734779955 cytosolic tRNA-Ala synthetase [Arabidops 0.923 0.975 0.810 0.0
16733651003 mitochondrial tRNA-Ala synthetase [Arabi 0.926 0.932 0.806 0.0
421855989 alanine-tRNA ligase (EC 6.1.1.7) - Arabi 0.926 0.945 0.806 0.0
>gi|255580622|ref|XP_002531134.1| alanyl-tRNA synthetase, putative [Ricinus communis] gi|223529283|gb|EEF31254.1| alanyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1674 bits (4336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 793/935 (84%), Positives = 857/935 (91%)

Query: 45   VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
            +AAMPG DPQ +EWPA KVRDTF  FFEDK HV+WKSSPVVPVNDPTLLFANAGMNQ+KP
Sbjct: 68   IAAMPGVDPQEMEWPAKKVRDTFISFFEDKKHVHWKSSPVVPVNDPTLLFANAGMNQFKP 127

Query: 105  IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
            IFLGTADPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 128  IFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 187

Query: 165  NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
             EAI WAWELLTK+Y+LPADR+YATYFGGDEKAGLAPD EARD WL+FLP  RVLPFGCK
Sbjct: 188  REAIGWAWELLTKIYKLPADRIYATYFGGDEKAGLAPDAEARDFWLQFLPPERVLPFGCK 247

Query: 225  DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            DNFWEMGDTGPCGPC+EIHYDR GNRDA+ LVNNDDPTCIEIWN+VFIQFNRESDGSLKP
Sbjct: 248  DNFWEMGDTGPCGPCTEIHYDRVGNRDASQLVNNDDPTCIEIWNLVFIQFNRESDGSLKP 307

Query: 285  LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
            LPAKHVDTG+GFERLTS+LQNKMSNYDTDVF+PIFDAIQQATGARPYSGKVG+DD D+VD
Sbjct: 308  LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDVDRVD 367

Query: 345  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ+GFFNGLVNI
Sbjct: 368  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNGLVNI 427

Query: 405  VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
            VVKVMGDVFPEL Q E  IREII  EEASFGKTLLKGIEKFKKAAQ+VQGKV   QDAF+
Sbjct: 428  VVKVMGDVFPELIQNEVRIREIIKEEEASFGKTLLKGIEKFKKAAQEVQGKVSCLQDAFV 487

Query: 465  LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
            LWDTYGFPLDLTQLMAEERGL VD+EGFNNAMDEARERSR+AQNKQAGG I+MDADAT+A
Sbjct: 488  LWDTYGFPLDLTQLMAEERGLWVDVEGFNNAMDEARERSRNAQNKQAGGDIIMDADATSA 547

Query: 525  LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            LHK+GV  TDDS+KFIWFQDH+SVIKAIYTG+EF+ S    NEVGIVL S+SFYAEQGGQ
Sbjct: 548  LHKKGVSVTDDSYKFIWFQDHESVIKAIYTGTEFLGSTTSSNEVGIVLESTSFYAEQGGQ 607

Query: 585  IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            IFD G +EG FGSF V NVQI+GGFV+HIGSLT  A R SVG++VICKVDYDRR LIAPN
Sbjct: 608  IFDTGSLEGTFGSFQVSNVQIFGGFVVHIGSLTRAAPRLSVGDKVICKVDYDRRTLIAPN 667

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPVDP  LR+IESIVNEQIKAE
Sbjct: 668  HTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDPALLRKIESIVNEQIKAE 727

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            L+V +KEATL+EAK INGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW SISAELC
Sbjct: 728  LEVSAKEATLSEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWSSISAELC 787

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH+SNT+EA+AFALLSEEGIAKG+RRITAVTT  A+KA E A  LE+E D+ SK EGS
Sbjct: 788  GGTHISNTKEAKAFALLSEEGIAKGVRRITAVTTDGAFKAMELASLLEQEADEISKTEGS 847

Query: 825  LLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETA 884
            LLEK VASLKS+VD A IPA KK DIR KI+ LQ++VRKAQKK++EEN+QKAVK+ATE A
Sbjct: 848  LLEKKVASLKSRVDSAPIPAAKKFDIRTKISALQDEVRKAQKKISEENMQKAVKIATEMA 907

Query: 885  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 944
            E AAS GK FCISRV+VGLDAAAVREAV KV+++KG+  MVFS DETTNK VVCAGV EK
Sbjct: 908  EVAASEGKQFCISRVDVGLDAAAVREAVSKVLQKKGLSAMVFSIDETTNKVVVCAGVAEK 967

Query: 945  SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 979
             D+SKQLEVSEWLTAAL+PL GRCGKGKGGLA+GQ
Sbjct: 968  GDKSKQLEVSEWLTAALKPLNGRCGKGKGGLATGQ 1002

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225423779|ref|XP_002277341.1| PREDICTED: alanyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461691|ref|XP_004148575.1| PREDICTED: alanine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449508396|ref|XP_004163302.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297737260|emb|CBI26461.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30694735|ref|NP_175439.2| Alanyl-tRNA synthetase [Arabidopsis thaliana] gi|21542451|sp|P36428.3|SYA_ARATH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags: Precursor gi|332194403|gb|AEE32524.1| Alanyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297852712|ref|XP_002894237.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata] gi|297340079|gb|EFH70496.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|5734779|gb|AAD50044.1|AC007980_9 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana] gi|27311841|gb|AAO00886.1| Unknown protein [Arabidopsis thaliana] gi|31711780|gb|AAP68246.1| At1g50200 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|1673365|emb|CAA80380.1| mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|421855|pir||S32671 alanine-tRNA ligase (EC 6.1.1.7) - Arabidopsis thaliana (fragment) Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1009
TAIR|locus:20119621003 ALATS "Alanyl-tRNA synthetase" 0.954 0.960 0.764 0.0
DICTYBASE|DDB_G0277823946 alaS "alanine-tRNA ligase" [Di 0.889 0.949 0.512 4.7e-238
SGD|S000005862983 ALA1 "Cytoplasmic and mitochon 0.871 0.894 0.506 3.1e-234
CGD|CAL0001447969 ALA1 [Candida albicans (taxid: 0.888 0.924 0.5 1e-233
UNIPROTKB|Q5A8K2969 ALA1 "Alanine--tRNA ligase" [C 0.888 0.924 0.5 1e-233
POMBASE|SPAC23C11.09959 ala1 "mitochondrial and cytopl 0.887 0.933 0.490 5.2e-223
UNIPROTKB|A6QLT9968 AARS "AARS protein" [Bos tauru 0.879 0.916 0.488 1.1e-220
MGI|MGI:2384560968 Aars "alanyl-tRNA synthetase" 0.877 0.914 0.491 1.4e-220
UNIPROTKB|F1P5J5916 AARS "Uncharacterized protein" 0.869 0.957 0.489 1.8e-220
RGD|1304832968 Aars "alanyl-tRNA synthetase" 0.880 0.917 0.487 1.8e-220
TAIR|locus:2011962 ALATS "Alanyl-tRNA synthetase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3875 (1369.1 bits), Expect = 0., P = 0.
 Identities = 736/963 (76%), Positives = 820/963 (85%)

Query:    17 ARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNH 76
             +RV  +  L     +H     S  ++S+VA MPG++P   +WPA +VRDT+  FF  K H
Sbjct:    18 SRVFYSSHLRRPFFSHFRFSSSSSTSSSVAVMPGSEPSETQWPAKRVRDTYVDFFRGKGH 77

Query:    77 VNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHN 136
               W SSPVVP NDPTLLFANAGMNQYKPIFLGTADPNT+LSKL+RACNTQKCIRAGGKHN
Sbjct:    78 KFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHN 137

Query:   137 DLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEK 196
             DLDDVGKDTYHHTFFEMLGNWSFGDYFK EAIEWAWELLTKVY LP DR+YATYFGGDEK
Sbjct:   138 DLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEK 197

Query:   197 AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLV 256
             AGL PDNEARDIWLK LP+ RVLPFGCKDNFWEMGDTGPCGPC+EIHYDR GNRDAASLV
Sbjct:   198 AGLQPDNEARDIWLKVLPSGRVLPFGCKDNFWEMGDTGPCGPCTEIHYDRIGNRDAASLV 257

Query:   257 NNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFM 316
             NNDDPTC+EIWN+VFIQFNRESDGSLKPLPAKHVDTG+GFERLTS+LQNKMSNYDTDVFM
Sbjct:   258 NNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFM 317

Query:   317 PIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVL 376
             PIFD IQ+ATGARPYSGKVG +D D+VDMAYRVVADHIRTLSFAIADGS PGNEGREYVL
Sbjct:   318 PIFDDIQKATGARPYSGKVGPEDVDRVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVL 377

Query:   377 RRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQXXXXXXXXXXXXXXSFGK 436
             RRILRRAVRYG E+LKA++GFFNGLV+ V++VMGDVF ELK+              SF K
Sbjct:   378 RRILRRAVRYGKEILKAEEGFFNGLVSSVIRVMGDVFTELKEHEKKITDIIKEEEASFCK 437

Query:   437 TLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAM 496
             TL KGIEKF+KA Q VQG  LSG DAFILWDTYGFPLDLTQLMAEERGLLVD++GFN AM
Sbjct:   438 TLAKGIEKFRKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAM 497

Query:   497 DEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGS 556
             +EARERSRSAQNKQAGGAIVMDADAT+ LHK GV ATDDSFK+IWFQDH+S +KAIYTGS
Sbjct:   498 EEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESELKAIYTGS 557

Query:   557 EFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSL 616
              F+ES    + VG+VL S+SFYAEQGGQIFD G IEG FG+F V NVQI+GGFV+HIG L
Sbjct:   558 TFLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYL 617

Query:   617 TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLR 676
             ++  G  SVG++VICKVDY+RRKLIAPNHTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLR
Sbjct:   618 SKETGEVSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 677

Query:   677 FDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVR 736
             FDFSHGKPVDPE LRRIESIVN+QIK ELDVFSKEA L+EAK I GLRAVFGEVYPDPVR
Sbjct:   678 FDFSHGKPVDPEDLRRIESIVNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVR 737

Query:   737 VVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAV 796
             VV+IGRKVEDLLADPEN EW  +S+E CGGTH++NTREA+AFALLSEEGIAKGIRR+TAV
Sbjct:   738 VVSIGRKVEDLLADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAV 797

Query:   797 TTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIAL 856
             TT  A+ A  AA  LE+EV+DAS+ EGS LEK V++LKS+VD A IPA KKADIR KIA 
Sbjct:   798 TTECAFDALNAASLLEREVEDASRAEGSALEKKVSALKSRVDAAIIPAAKKADIRTKIAS 857

Query:   857 LQNQVRKAQKKVAEENLQXXXXXXXXXXXXXXSNGKPFCISRVEVGLDAAAVREAVLKVI 916
             LQN+VRKAQKK+AE+NL+              S+GK FCI +++VGLDAAAVREAV KV+
Sbjct:   858 LQNEVRKAQKKIAEQNLKKSVKLATEAAESAASDGKTFCIIQLDVGLDAAAVREAVSKVM 917

Query:   917 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLXXXXXXXXXXLA 976
             E+KGM +MVFSTDE+TNKAVVCAGVPEKSDQ K L+V+EWLT AL PL          LA
Sbjct:   918 EKKGMSIMVFSTDESTNKAVVCAGVPEKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLA 977

Query:   977 SGQ 979
             SGQ
Sbjct:   978 SGQ 980
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003676 "nucleic acid binding" evidence=IEA
GO:0004813 "alanine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006419 "alanyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0043039 "tRNA aminoacylation" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006406 "mRNA export from nucleus" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0010074 "maintenance of meristem identity" evidence=RCA
GO:0051604 "protein maturation" evidence=RCA
DICTYBASE|DDB_G0277823 alaS "alanine-tRNA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000005862 ALA1 "Cytoplasmic and mitochondrial alanyl-tRNA synthetase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0001447 ALA1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A8K2 ALA1 "Alanine--tRNA ligase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
POMBASE|SPAC23C11.09 ala1 "mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLT9 AARS "AARS protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2384560 Aars "alanyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P5J5 AARS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1304832 Aars "alanyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7UBU3SYA_SHIFL6, ., 1, ., 1, ., 70.38520.81460.9383yesno
B1XCM5SYA_ECODH6, ., 1, ., 1, ., 70.38630.81460.9383yesno
P36428SYA_ARATH6, ., 1, ., 1, ., 70.80960.92660.9322yesno
A8ANQ1SYA_CITK86, ., 1, ., 1, ., 70.38760.81760.9428yesno
O13914SYA_SCHPO6, ., 1, ., 1, ., 70.49310.90880.9562yesno
A7ZQC5SYA_ECO246, ., 1, ., 1, ., 70.38630.81460.9383yesno
O01541SYAC_CAEEL6, ., 1, ., 1, ., 70.48430.89590.9338yesno
A6VA71SYA_PSEA76, ., 1, ., 1, ., 70.40430.80470.9290yesno
Q5RC02SYAC_PONAB6, ., 1, ., 1, ., 70.49210.90380.9421yesno
Q8BGQ7SYAC_MOUSE6, ., 1, ., 1, ., 70.49370.90280.9411yesno
Q02I63SYA_PSEAB6, ., 1, ., 1, ., 70.40340.80270.9267yesno
Q9VLM8SYAC_DROME6, ., 1, ., 1, ., 70.45920.89790.9378yesno
Q54Y20SYAC_DICDI6, ., 1, ., 1, ., 70.51260.89290.9524yesno
P40825SYA_YEAST6, ., 1, ., 1, ., 70.51890.86910.8921yesno
P50475SYAC_RAT6, ., 1, ., 1, ., 70.49370.90280.9411yesno
Q15RG5SYA_PSEA66, ., 1, ., 1, ., 70.38350.80570.9398yesno
Q1R804SYA_ECOUT6, ., 1, ., 1, ., 70.38630.81460.9383yesno
Q0TEI3SYA_ECOL56, ., 1, ., 1, ., 70.38630.81460.9383yesno
Q3YYG6SYA_SHISS6, ., 1, ., 1, ., 70.38630.81460.9383yesno
Q9I553SYA_PSEAE6, ., 1, ., 1, ., 70.40340.80270.9267yesno
A1AEN7SYA_ECOK16, ., 1, ., 1, ., 70.38630.81460.9383yesno
Q0T1C3SYA_SHIF86, ., 1, ., 1, ., 70.38520.81460.9383yesno
A8A3H4SYA_ECOHS6, ., 1, ., 1, ., 70.38630.81460.9383yesno
Q5AQL1SYA_EMENI6, ., 1, ., 1, ., 70.49010.88700.9313yesno
P49588SYAC_HUMAN6, ., 1, ., 1, ., 70.49210.90380.9421yesno
A8GA09SYA_SERP56, ., 1, ., 1, ., 70.37870.81460.9394yesno
Q6LMU3SYA_PHOPR6, ., 1, ., 1, ., 70.39860.81360.9404yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.70.979
3rd Layer6.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1009
PLN02900936 PLN02900, PLN02900, alanyl-tRNA synthetase 0.0
PRK00252865 PRK00252, alaS, alanyl-tRNA synthetase; Reviewed 0.0
COG0013879 COG0013, AlaS, Alanyl-tRNA synthetase [Translation 0.0
pfam01411551 pfam01411, tRNA-synt_2c, tRNA synthetases class II 0.0
TIGR00344851 TIGR00344, alaS, alanine--tRNA ligase 0.0
cd00673232 cd00673, AlaRS_core, Alanyl-tRNA synthetase (AlaRS 1e-132
PRK01584594 PRK01584, PRK01584, alanyl-tRNA synthetase; Provis 1e-118
PRK13902900 PRK13902, alaS, alanyl-tRNA synthetase; Provisiona 5e-88
TIGR03683902 TIGR03683, A-tRNA_syn_arch, alanyl-tRNA synthetase 1e-84
PRK01584594 PRK01584, PRK01584, alanyl-tRNA synthetase; Provis 1e-33
COG2872241 COG2872, COG2872, Predicted metal-dependent hydrol 6e-28
smart0086343 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA syn 1e-12
pfam0797344 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synt 2e-12
PLN02961223 PLN02961, PLN02961, alanine-tRNA ligase 2e-12
PRK00413 638 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed 3e-05
PRK12305 575 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed 2e-04
>gnl|CDD|215487 PLN02900, PLN02900, alanyl-tRNA synthetase Back     alignment and domain information 
 Score = 1633 bits (4230), Expect = 0.0
 Identities = 628/940 (66%), Positives = 719/940 (76%), Gaps = 26/940 (2%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MP  D    EWP  ++R TF  FFE K H    SSP+VPV+DPTLLF NAGMNQ+KPIFL
Sbjct: 1   MPEDDAPEKEWPGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT L KL RA NTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTPLRKLPRATNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLTKVY LPADRLYATYFGGDEK   APD+EAR IWL +LP  RVLPFGCKDNF
Sbjct: 121 IGWAWELLTKVYGLPADRLYATYFGGDEK--QAPDDEARAIWLDYLPEERVLPFGCKDNF 178

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPCSEIHYDR G RDAA LVNNDDP  IEIWN+VFIQFNRE+DGSLKPLPA
Sbjct: 179 WEMGDTGPCGPCSEIHYDRIGERDAADLVNNDDPRFIEIWNLVFIQFNREADGSLKPLPA 238

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+G ERL SILQNK SNYDTD+FMPIFDAIQ+ATGARPY+GKVGA+D D+VDMAY
Sbjct: 239 KHVDTGMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYAGKVGAEDDDRVDMAY 298

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADG  P NEGR YVLRR+LRRAVRYG  +L A++GFF  LV +VV+
Sbjct: 299 RVVADHIRTLSFAIADGVVPSNEGRGYVLRRLLRRAVRYGRLLLGAEEGFFPALVEVVVE 358

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFI 464
           + GDVFPE+K+ E  I EIIA EE SFGKTL KGIEKFKKA    +   G VLSG+DAF+
Sbjct: 359 LSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKKALAAAKANGGPVLSGKDAFL 418

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT+LMAEERG+ VD+EGF  AM+EARERSR+A  K  GGAI + A+AT+ 
Sbjct: 419 LYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIELAAEATSW 478

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           L K+GV ATDD  K+ W  DH++V+KAI TG  F+ESV  G+EVGIVL  +SFYAE GGQ
Sbjct: 479 LQKQGVAATDDFLKYDWLSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQ 538

Query: 585 IFDEGFIEGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           I D G +EG  G    V +VQ  GGFV+HIG++TE  G  SVG+ V CKVDYDRR+ IAP
Sbjct: 539 IGDTGVLEGSGGAVVEVSDVQKAGGFVLHIGTVTE--GSVSVGDAVTCKVDYDRRRRIAP 596

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+LN AL+EVLGDHVDQKGS+V  EKLRFDFSHGKP+ PE LR +ES+VNE I  
Sbjct: 597 NHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKPMTPEELREVESLVNEWIGD 656

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            L V +KE  LA+AK INGLRAVFGE YPDPVRVV++G                  S EL
Sbjct: 657 ALPVEAKEMPLADAKRINGLRAVFGEKYPDPVRVVSVGGV---------------YSMEL 701

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG 823
           CGGTH+SNT EAEAF LLSEEGIAKGIRRITAVT G A +A  AA SLE+E+D A K+EG
Sbjct: 702 CGGTHVSNTAEAEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKVEG 761

Query: 824 SLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATET 883
           S LEK VASLKS+VD A IPA KK +IRA+++ LQ ++R AQK+ A    + AV  ATE 
Sbjct: 762 SDLEKKVASLKSRVDAAVIPAAKKEEIRARVSALQKELRAAQKEAAALRAKLAVAKATEL 821

Query: 884 AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK-GMPVMVFSTDETTNKAVVCAGVP 942
           A  A S GK   ++R++VG+DAAA++EA  KVI +      +V S+DE   K  + A VP
Sbjct: 822 ASKALSAGKSVLVARLDVGVDAAALKEAAEKVIAKLGDPAAVVLSSDEEKGKVSLVAAVP 881

Query: 943 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQVSG 982
               + K L+  +WL  A+  L G  G GK G A GQ   
Sbjct: 882 PGVVK-KGLKAGKWL-GAIAKLCGGGGGGKPGFAQGQGRD 919

Length = 936
>gnl|CDD|234701 PRK00252, alaS, alanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223092 COG0013, AlaS, Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|216484 pfam01411, tRNA-synt_2c, tRNA synthetases class II (A) Back     alignment and domain information
>gnl|CDD|232931 TIGR00344, alaS, alanine--tRNA ligase Back     alignment and domain information
>gnl|CDD|238360 cd00673, AlaRS_core, Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|234962 PRK01584, PRK01584, alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237551 PRK13902, alaS, alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234309 TIGR03683, A-tRNA_syn_arch, alanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234962 PRK01584, PRK01584, alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|225427 COG2872, COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|197931 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>gnl|CDD|219676 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>gnl|CDD|178546 PLN02961, PLN02961, alanine-tRNA ligase Back     alignment and domain information
>gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1009
PLN02900936 alanyl-tRNA synthetase 100.0
KOG0188895 consensus Alanyl-tRNA synthetase [Translation, rib 100.0
COG0013879 AlaS Alanyl-tRNA synthetase [Translation, ribosoma 100.0
TIGR00344851 alaS alanine--tRNA ligase. The model describes ala 100.0
PRK00252865 alaS alanyl-tRNA synthetase; Reviewed 100.0
TIGR03683902 A-tRNA_syn_arch alanyl-tRNA synthetase. This famil 100.0
PRK13902900 alaS alanyl-tRNA synthetase; Provisional 100.0
PRK01584594 alanyl-tRNA synthetase; Provisional 100.0
PF01411552 tRNA-synt_2c: tRNA synthetases class II (A); Inter 100.0
cd00673232 AlaRS_core Alanyl-tRNA synthetase (AlaRS) class II 100.0
COG2872241 Predicted metal-dependent hydrolases related to al 100.0
PLN02961223 alanine-tRNA ligase 100.0
KOG2105415 consensus Predicted metal-dependent hydrolase, con 100.0
PLN02837 614 threonine-tRNA ligase 99.93
PRK12305 575 thrS threonyl-tRNA synthetase; Reviewed 99.91
PRK12444 639 threonyl-tRNA synthetase; Reviewed 99.9
PRK00413 638 thrS threonyl-tRNA synthetase; Reviewed 99.89
PLN02908 686 threonyl-tRNA synthetase 99.85
TIGR00418 563 thrS threonyl-tRNA synthetase. This model represen 99.85
COG0441 589 ThrS Threonyl-tRNA synthetase [Translation, riboso 99.79
PF0797344 tRNA_SAD: Threonyl and Alanyl tRNA synthetase seco 99.3
PRK14799 545 thrS threonyl-tRNA synthetase; Provisional 99.06
smart0086344 tRNA_SAD Threonyl and Alanyl tRNA synthetase secon 98.99
KOG1637 560 consensus Threonyl-tRNA synthetase [Translation, r 98.88
PF0227268 DHHA1: DHHA1 domain; InterPro: IPR003156 This doma 97.1
cd00768211 class_II_aaRS-like_core Class II tRNA amino-acyl s 95.95
PRK09348283 glyQ glycyl-tRNA synthetase subunit alpha; Validat 95.37
TIGR00388293 glyQ glycyl-tRNA synthetase, tetrameric type, alph 94.72
PRK14908 1000 glycyl-tRNA synthetase; Provisional 93.14
cd00733279 GlyRS_alpha_core Class II Glycyl-tRNA synthetase ( 92.82
COG0752298 GlyQ Glycyl-tRNA synthetase, alpha subunit [Transl 91.94
cd00669269 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl 85.99
TIGR00458428 aspS_arch aspartyl-tRNA synthetase, archaeal type. 83.44
PRK03932450 asnC asparaginyl-tRNA synthetase; Validated 82.88
PF02091284 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit 82.12
cd00670235 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t 81.27
>PLN02900 alanyl-tRNA synthetase Back     alignment and domain information 
Probab=100.00  E-value=4.1e-246  Score=2232.03  Aligned_cols=915  Identities=68%  Similarity=1.066  Sum_probs=837.6

Q ss_pred             ccCCCCCCCCCChhHHHHHHHHhhhhCCCeeecCCCCccCCCCCcccccccccccccccccccCCCCccccccccccccc
Q 001826           48 MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQK  127 (1009)
Q Consensus        48 ~~~~~~~~~~~~~~eiR~~fl~fF~~~gH~~v~s~slvp~~dptllftnAGm~qfk~~flg~~~p~~~~~~~~r~~~~Qk  127 (1009)
                      ||-.|...++|+++|||++||+||++|||+++|||||||+|||||||||||||||||||+|+++|++++++++|+|||||
T Consensus         1 ~~~~~~~~~~~~~~eiR~~Fl~FF~~~gH~~v~s~slvp~~dptllftnAGm~~Fk~~f~G~~~p~~~~~~~~R~~~~Qk   80 (936)
T PLN02900          1 MPEDDAPEKEWPGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGTADPNTPLRKLPRATNTQK   80 (936)
T ss_pred             CCCCccccCCCCHHHHHHHHHHHHHhCCCEEeCCCCcCCCCCCCeeeeecchhhhhhhhcCCCCCCCCCCCCCceeeecc
Confidence            78888888999999999999999999999999999999999999999999999999999999999887888999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHcccccCCCCCceEEEEECCCCcCCCCCcHHHHH
Q 001826          128 CIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARD  207 (1009)
Q Consensus       128 CiR~gGkhnDld~VG~t~rH~TfFEMlGn~SfgdYfK~eai~~awe~lt~~l~i~~~rL~vT~~~~~~~~~~~~D~E~~~  207 (1009)
                      |||+|||||||||||+|+|||||||||||||||||||+|||.|||||||++|||||+|||||||++|+++  |+|+||++
T Consensus        81 CiR~gGKHnDlenVG~t~rHhTfFEMlGnfSfgdYfK~eaI~~awe~lT~~l~i~~~~l~vTv~~~D~~~--~~d~Ea~~  158 (936)
T PLN02900         81 CIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEKQ--APDDEARA  158 (936)
T ss_pred             cccCCCCCCCHhhccCCCCchHHHHhhhccchhhhhHHHHHHHHHHHHHHhcCCCHHHEEEEEeCCCCCc--CCCHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999874  99999999


Q ss_pred             HHHhcCCCCCcccCCCCCCcccCCCCCCCcCceeEEeecCCCCCCCCCCCCCCCceEEEeeecccccccCCCCccccCCC
Q 001826          208 IWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA  287 (1009)
Q Consensus       208 iW~~~~~~~~i~~~~~~dNfW~mG~~GpcGPcsEI~yd~~~~~~~~~~~~~~~~r~lEiwNlVFmq~~~~~~g~l~~Lp~  287 (1009)
                      ||+++||++||+++|.+||||+||++|||||||||||||++++++.++++.||+|||||||||||||||++||+|+|||+
T Consensus       159 iW~~~~~~~rI~~~~~~dNfW~~G~tGpcGPcsEi~yD~g~~~~~~~~~~~~~~r~lEiwNlVFmq~~~~~~g~~~~Lp~  238 (936)
T PLN02900        159 IWLDYLPEERVLPFGCKDNFWEMGDTGPCGPCSEIHYDRIGERDAADLVNNDDPRFIEIWNLVFIQFNREADGSLKPLPA  238 (936)
T ss_pred             HHHHhCCHHHeecCCcccCCccCCCCcCCCCCeEEEEecCCccCccccCCCCCCCEEEEeeeeeeeeeecCCCceeeCCC
Confidence            99999999999999999999999999999999999999998877776688899999999999999999999999999999


Q ss_pred             CcccccccHHHHHHHHcCCCCCccccccHHHHHHHHHHhCCCCCCCCCCCCccccccchhhhhhhhhhhheeeecCCCcc
Q 001826          288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCP  367 (1009)
Q Consensus       288 ~~IDTGmGlERl~~vlqg~~snydtdlf~pli~~i~~~~~~~~y~g~~~~~~~~~~~~~~rviaDH~R~~~~~i~DGv~P  367 (1009)
                      ||||||||||||+|||||++||||||+|.|||++|++++|+++|+|....++.+..+.||||||||+||++|||+||++|
T Consensus       239 ~~IDTGmGLERl~~vlqg~~snydtDlf~pii~~i~~~~~~~~~~~~~y~~~~~~~~~a~rviaDH~R~~~f~i~DGv~P  318 (936)
T PLN02900        239 KHVDTGMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYAGKVGAEDDDRVDMAYRVVADHIRTLSFAIADGVVP  318 (936)
T ss_pred             CeeecCcCHHHHHHHHcCCCCcchhhhHHHHHHHHHHHhCCCccccccccccccccceeeeeehhhHHHHHHHHhcCCcc
Confidence            99999999999999999999999999999999999999998889886543332456789999999999999999999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhhCCCcchhhhHHHHHHHHhcccChhhHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001826          368 GNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK  447 (1009)
Q Consensus       368 sn~grgYvlRrilRRa~r~~~~~lg~~~~fl~~lv~~v~~~~~~~ypel~~~~~~I~~ii~~Ee~~F~~tl~~g~~~l~~  447 (1009)
                      ||+|||||||||||||+|+|+++||++.|||++||++|++.|++.||||.++++.|++||..||++|.+||++|+++|++
T Consensus       319 sN~grgYvlRrilRRa~r~~~~~lg~~~~fl~~lv~~v~~~~~~~ypel~~~~~~I~~ii~~EE~~F~~tl~~G~~~l~~  398 (936)
T PLN02900        319 SNEGRGYVLRRLLRRAVRYGRLLLGAEEGFFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKK  398 (936)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999644899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCCChhhhhhhhccCCCChHHHHHHHHHcCceeChhhHHHHHHHHHHHhHhhhccccCCccccchhHHHH
Q 001826          448 AAQDVQ---GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA  524 (1009)
Q Consensus       448 ~~~~~~---~~~l~g~~af~LydtyGfP~dlt~~~a~e~g~~vd~~~f~~~~~~~~~~sr~~~~~~~~~~~~~~~~~~~~  524 (1009)
                      ++++++   ++.|||++||+||||||||+|||++||+|+|++||+++|+++|++||++||++++.........+...+..
T Consensus       399 ~i~~~~~~~~~~l~g~~af~LydTyGfP~dlt~~ia~e~g~~vD~~~F~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  478 (936)
T PLN02900        399 ALAAAKANGGPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIELAAEATSW  478 (936)
T ss_pred             HHHHHhhcCCCcCCHHHHHHHHhccCCCHHHHHHHHHHcCCeecHHHHHHHHHHHHHHHHhhhhccccccccccHHHHHH
Confidence            998765   36899999999999999999999999999999999999999999999999876532221111223233344


Q ss_pred             HhhcCCCCcccccCccccee-eeEEEEEEEeCCeeeeeecCCCeEEEEecccccccCCCCCCCCeEEEEcccc-cEEEEe
Q 001826          525 LHKRGVLATDDSFKFIWFQD-HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG-SFYVRN  602 (1009)
Q Consensus       525 l~~~~~~~T~~~~~Y~y~~~-~~a~Vl~i~~~~~~~~~~~~~~~~~vvLD~T~FYpegGGQ~~D~G~I~~~~~-~~~V~d  602 (1009)
                      +.+..++++.+|.||++ .+ ++|+|++++.+++.++++..++.+.|+||+|+|||||||||+|+|+|..+++ .++|.+
T Consensus       479 ~~~~~~~~~t~f~gY~~-~~~~~~~v~~i~~~~~~v~~~~~g~~~~vvLd~T~FYpEgGGQp~D~G~I~~~~~~~~~V~d  557 (936)
T PLN02900        479 LQKQGVAATDDFLKYDW-LSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLEGSGGAVVEVSD  557 (936)
T ss_pred             HHhccCCCCCccccccc-CCccceEEEEEEECCceeeeccCCCeEEEEEeCCCCCCCCCCCCCCEEEEecCCCCEEEEEE
Confidence            43332344446999994 45 8999999998888888888888899999999999999999999999987666 799999


Q ss_pred             EEEECCEEEEEEEeecccccCCCCCEEEEEEehhhhhhhhhhchHHHHHHHHHHHHhCCccccccccccCCceEEEecCC
Q 001826          603 VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG  682 (1009)
Q Consensus       603 v~~~~g~i~H~~~~~~~~~~l~~G~~V~~~ID~~rR~~~m~~HTAtHLL~aAL~~vlg~~v~q~Gs~v~~d~~r~Df~~~  682 (1009)
                      |++.+|.++|++.+..  +.+.+|++|.+.|||+||+++|++|||+|||++|++++||.++.|.|++++++++||||+++
T Consensus       558 v~k~~g~i~H~~~~~~--g~l~~G~~V~~~VD~~rR~~~m~~HTAtHLL~aALr~vlG~~v~q~Gs~v~~d~~r~Df~~~  635 (936)
T PLN02900        558 VQKAGGFVLHIGTVTE--GSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHG  635 (936)
T ss_pred             EEEECCEEEEEEEecc--CCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeccccccCCeEEEEeeCC
Confidence            9999999999987654  67899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHcCCCEEEEEcCHHHHhcccCchhhcCCcCCCCEEEEEecccccccccCCCCCcccce-eE
Q 001826          683 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI-SA  761 (1009)
Q Consensus       683 ~~lt~e~L~~IE~~~NeiI~~n~pV~~~~~~~eEA~~~~g~~~~f~e~y~d~VRVV~Ig~~~~~ll~~~~~~~~~~~-d~  761 (1009)
                      +++|++++.+||+.||++|++|+||++.+++++||+++.|++++|+++|++.||||+|+                ++ |.
T Consensus       636 ~~lt~eel~~IE~~vNe~I~~n~pV~~~~~~~eEA~~~~g~~~~f~e~y~~~VRVV~Ig----------------~~~d~  699 (936)
T PLN02900        636 KPMTPEELREVESLVNEWIGDALPVEAKEMPLADAKRINGLRAVFGEKYPDPVRVVSVG----------------GVYSM  699 (936)
T ss_pred             CCCCHHHHHHHHHHHHHHHHhCCCeEEEEcCHHHHhhccChHhhcCCCCCCcEEEEEEC----------------Cccce
Confidence            99999999999999999999999999999999999997799999999999999999998                56 99


Q ss_pred             eeccCCCcccccccccEEEeeeccccCCceEEEEEcchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHhhhcCCCC
Q 001826          762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAA  841 (1009)
Q Consensus       762 e~CgGTHV~nTgeIg~fkI~~~~~~~~Gv~RI~~vtG~~A~~~~~~~~~~~~~l~~l~~~~~~~i~k~l~~~~~~~~~~~  841 (1009)
                      ++||||||+|||+||.|+|++++++++|++||+|+||.+|++++++..+.+++++.+++++..++.+++..|...+...+
T Consensus       700 elCGGTHV~nTgeIG~fkIls~~~~~~G~rRIe~v~G~~A~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  779 (936)
T PLN02900        700 ELCGGTHVSNTAEAEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKVEGSDLEKKVASLKSRVDAAV  779 (936)
T ss_pred             eCCCCCcCCccccCceEEEEEEeeecCCeEEEEEEEcHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhhhhhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999877888899999999888888


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccEEEEEeccCCCHHHHHHHHHHHHhcc-C
Q 001826          842 IPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK-G  920 (1009)
Q Consensus       842 i~~~~~~~l~~~l~~l~~elk~l~ke~~~l~~~~a~~~a~~l~~~~~~~~~~~iv~~~~~~~d~~~L~~~a~~l~~~~-~  920 (1009)
                      +|+.+..++.++++++++++++++|++++++.+++...++.+++++...+..+++..++.+.+++.|+++++.+++.. +
T Consensus       780 ~~~~~~~el~~~v~~l~~e~k~l~k~~~~l~~~la~~~~~~l~~~~~~~~~~~~v~~~~~~~d~~~Lr~la~~l~~~~~~  859 (936)
T PLN02900        780 IPAAKKEEIRARVSALQKELRAAQKEAAALRAKLAVAKATELASKALSAGKSVLVARLDVGVDAAALKEAAEKVIAKLGD  859 (936)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEEecCCCCHHHHHHHHHHHHhhcCC
Confidence            998899999999999999999999999999999999888888776543334666777754579999999999998854 4


Q ss_pred             CcEEEEEEeCCCCeEEEEEeeCCCcccccCccHHHHHHHHHhhcCCccCCCCCCCeeeeccCCcc
Q 001826          921 MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQVSGFYM  985 (1009)
Q Consensus       921 ~~vvll~~~~~~~k~~~~~~v~~~~~~~~~~~A~~~~k~v~~~lgGkGG~Gk~~~AQG~g~~~~~  985 (1009)
                      ..+++++....++++.+++++++++ ..++++|++|++++++.+||||| |+|.||||+|++++.
T Consensus       860 ~~vvl~~~~~~~~k~~~~~~~~~~~-~~~~~~A~~lvk~~~~~~gGkGG-G~~~~AQggg~~~~~  922 (936)
T PLN02900        860 PAAVVLSSDEEKGKVSLVAAVPPGV-VKKGLKAGKWLGAIAKLCGGGGG-GKPGFAQGQGRDAEK  922 (936)
T ss_pred             ceEEEEEecCCCCeEEEEEEEChHH-hhcCCCHHHHHHHHHHhcCCCCC-CcHHHeeeCCCCHHH
Confidence            3666665432457888888888876 65679999999999999999999 999999999987763

>KOG0188 consensus Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00344 alaS alanine--tRNA ligase Back     alignment and domain information
>PRK00252 alaS alanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR03683 A-tRNA_syn_arch alanyl-tRNA synthetase Back     alignment and domain information
>PRK13902 alaS alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01584 alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF01411 tRNA-synt_2c: tRNA synthetases class II (A); InterPro: IPR018164 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00673 AlaRS_core Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain Back     alignment and domain information
>COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] Back     alignment and domain information
>PLN02961 alanine-tRNA ligase Back     alignment and domain information
>KOG2105 consensus Predicted metal-dependent hydrolase, contains AlaS domain [General function prediction only] Back     alignment and domain information
>PLN02837 threonine-tRNA ligase Back     alignment and domain information
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12444 threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02908 threonyl-tRNA synthetase Back     alignment and domain information
>TIGR00418 thrS threonyl-tRNA synthetase Back     alignment and domain information
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF07973 tRNA_SAD: Threonyl and Alanyl tRNA synthetase second additional domain; InterPro: IPR012947 The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer Back     alignment and domain information
>PRK14799 thrS threonyl-tRNA synthetase; Provisional Back     alignment and domain information
>smart00863 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF02272 DHHA1: DHHA1 domain; InterPro: IPR003156 This domain is often found adjacent to the DHH domain, found in the RecJ-like phosphoesterase family IPR001667 from INTERPRO, and is called DHHA1 for DHH associated domain Back     alignment and domain information
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated Back     alignment and domain information
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit Back     alignment and domain information
>PRK14908 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain Back     alignment and domain information
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain Back     alignment and domain information
>TIGR00458 aspS_arch aspartyl-tRNA synthetase, archaeal type Back     alignment and domain information
>PRK03932 asnC asparaginyl-tRNA synthetase; Validated Back     alignment and domain information
>PF02091 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit; InterPro: IPR002310 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1009
1yfr_A465 Crystal Structure Of Alanyl-Trna Synthetase In Comp 1e-110
3htz_A464 Crystal Structure Of The Catalytic Fragment Of Alan 1e-110
3hxu_A441 Crystal Structure Of Catalytic Fragment Of E. Coli 1e-109
3hxz_A441 Crystal Structure Of Catalytic Fragment Of E. Coli 1e-108
1riq_A465 The Crystal Structure Of The Catalytic Fragment Of 2e-99
2zzf_A752 Crystal Structure Of Alanyl-Trna Synthetase Without 9e-43
2zze_A752 Crystal Structure Of Alanyl-Trna Synthetase Without 1e-32
2ztg_A739 Crystal Structure Of Archaeoglobus Fulgidus Alanyl- 9e-27
2e1b_A216 Crystal Structure Of The Alax-M Trans-Editing Enzym 1e-07
>pdb|1YFR|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase In Complex With Atp And Magnesium Length = 465 Back     alignment and structure 
Iteration: 1

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/450 (44%), Positives = 284/450 (63%), Gaps = 33/450 (7%)
Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FFE K H   KS+P+VP NDPTLLF NAGM  +K +FLG      +    
Sbjct: 5   AHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGL-----EKRPY 59
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA + QKC+R  GKHNDL+ VG  + HHTFFEMLGN+SFGDYFK EAIE+AWE +T+V 
Sbjct: 60  KRATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVL 119
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP ++LY + +  DE        EA  IW +   +P+ R+   G +DNFW+MGD GPCG
Sbjct: 120 KLPKEKLYVSVYKDDE--------EAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCG 171
Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           P SEI+ DR    +        D   +EIWN+VF+Q+NR+ +G L PLP  ++DTG+G E
Sbjct: 172 PSSEIYVDRGEEYEG-------DERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLE 224
Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ S+LQ K SN++ D+  P+    ++ +G + Y  K       + D+A RV+ADH+R +
Sbjct: 225 RIASVLQGKNSNFEIDIIFPLIQFGEEVSGKK-YGEKF------ETDVALRVIADHLRAI 277
Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAI+DG  P NEGR YV+RRILRRA+R+G + L  ++ F    V++VV +M + +PEL+
Sbjct: 278 TFAISDGVIPSNEGRGYVIRRILRRAMRFGYK-LGIENPFLYKGVDLVVDIMKEPYPELE 336
Query: 418 QXXXXXXXXXXXXXXSFGKTLLKGIEKFKKAAQDV--QG-KVLSGQDAFILWDTYGFPLD 474
                           F KTL  G+E  ++  Q    +G K LSG++ F  +DTYGFP+D
Sbjct: 337 LSREFVKGIVKGEEKRFIKTLKAGMEYIQEVIQKALEEGRKTLSGKEVFTAYDTYGFPVD 396
Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSR 504
           L   +A E+GL +D+EGF   ++E RER+R
Sbjct: 397 LIDEIAREKGLGIDLEGFQCELEEQRERAR 426
>pdb|3HTZ|A Chain A, Crystal Structure Of The Catalytic Fragment Of Alanyl-Trna Synthetase In Complex With L-Serine: Re-Refined Length = 464 Back     alignment and structure
>pdb|3HXU|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars In Complex With Alasa Length = 441 Back     alignment and structure
>pdb|3HXZ|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars G237a In Complex With Alasa Length = 441 Back     alignment and structure
>pdb|1RIQ|A Chain A, The Crystal Structure Of The Catalytic Fragment Of The Alanyl-Trna Synthetase Length = 465 Back     alignment and structure
>pdb|2ZZF|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase Without Oligomerization Domain Length = 752 Back     alignment and structure
>pdb|2ZZE|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase Without Oligomerization Domain In Lysine-Methylated Form Length = 752 Back     alignment and structure
>pdb|2ZTG|A Chain A, Crystal Structure Of Archaeoglobus Fulgidus Alanyl-Trna Synthetase Lacking The C-Terminal Dimerization Domain In Complex With Ala-Sa Length = 739 Back     alignment and structure
>pdb|2E1B|A Chain A, Crystal Structure Of The Alax-M Trans-Editing Enzyme From Pyrococcus Horikoshii Length = 216 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1009
2ztg_A739 Alanyl-tRNA synthetase; class-II aminoacyl-tRNA sy 0.0
1yfs_A465 Alanyl-tRNA synthetase; alpha-beta fold, helix-loo 0.0
3hy0_A441 Alanyl-tRNA synthetase; aminoacyl-tRNA synthetase, 0.0
2zze_A752 Alanyl-tRNA synthetase; ligase, hydrolase; HET: ML 1e-164
2e1b_A216 PH0108, 216AA long hypothetical alanyl-tRNA synthe 1e-68
3kew_A241 DHHA1 domain protein; structural genomics, PSI-2, 3e-67
1v4p_A157 Alanyl-tRNA synthetase; alanine-tRNA ligase, riken 3e-47
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1nyr_A 645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 7e-05
1qf6_A 642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 1e-04
>2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus} Length = 739 Back     alignment and structure
 Score =  720 bits (1861), Expect = 0.0
 Identities = 165/773 (21%), Positives = 280/773 (36%), Gaps = 139/773 (17%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL-GTADPNTQLSKLTR 121
           +R+ +  FFE + H   +  PVV      +    A +  ++P    G A P         
Sbjct: 65  MREYYLNFFERRGHGRIERYPVVARWRTDIYLTIASIADFQPFVTSGVAPP-----PANP 119

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD-----YFKNEAIEWAWELLT 176
              +Q CIR     +DLD VG+   H T FEM+ + +F       Y+KNE + +  ELL 
Sbjct: 120 LTISQPCIRL----DDLDSVGRTGRHLTLFEMMAHHAFNYPGKEIYWKNETVAYCTELLN 175

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           ++  +  + +                                     K+  W  G  G  
Sbjct: 176 ELG-VKKEDIVY-----------------------------------KEEPWAGG--GNA 197

Query: 237 GPCSEIHYDR---------TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           GPC E                       +        ++ N +                 
Sbjct: 198 GPCLEAIVGGLEVATLVFMNLEEHPEGDIEIKGARYRKMDNYIVDTGYGLERFVWASKGT 257

Query: 288 KHVDTGLGFERLTSILQ--NKMSNYDTDVFMPIFDAIQQATG------------------ 327
             V   +  E + +I+   N   N + +    I     +  G                  
Sbjct: 258 PTVYDAIFPEVVDTIIDNSNVSFNREDERVRRIVAESSKLAGIMGELRGERLNQLRKSVA 317

Query: 328 ARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYG 387
                     +           +ADH R + F + DG  P N G  Y+ R ++RR++R  
Sbjct: 318 DTVGVSVEELEGIVVPLEKVYSLADHTRCILFMLGDGLVPSNAGAGYLARLMIRRSLRLA 377

Query: 388 SEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK 447
            E L+        LV +  K++G  F       + ++EI+  E+  +  T+ KG    ++
Sbjct: 378 EE-LEL-GLDLYDLVEMHKKILGFEFDVPL---STVQEILELEKERYRTTVSKGTRLVER 432

Query: 448 AAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIE-GFNNAMDEARERSRSA 506
             +    K L   D   L+D++G P++L   +A E+G  V++       + +   ++   
Sbjct: 433 LVER--KKKLEKDDLIELYDSHGIPVELAVGIAAEKGAEVEMPKDIYAELAKRHSKAEKV 490

Query: 507 QNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN 566
           Q K     +  +  AT               + +++ D         T  EF   V+   
Sbjct: 491 QEK--KITLQNEYPAT---------------EKLYYDD--------PTLLEFEAEVIGVE 525

Query: 567 EVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
              ++L  S+FY E GGQ  D G++    G F V +V    G V+H+        +  VG
Sbjct: 526 GDFVILNRSAFYPESGGQDNDVGYLIANGGKFEVVDVLEADGVVLHVVK----GAKPEVG 581

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVD 686
            +V   +D D R     +H+ TH+L ++L++VLG+HV Q G+     K R D +H +   
Sbjct: 582 TKVKGVIDSDVRWRHMRHHSATHVLLYSLQKVLGNHVWQAGARKEFSKARLDVTHFRRPS 641

Query: 687 PEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF--GEVYPDPVRVVAIGRKV 744
            E ++ IE + N +I A   +  +     EA+   G   ++  G      +RVV +G   
Sbjct: 642 EEEIKEIEMLANREILANKPIKWEWMDRIEAERKFGF-RLYQGGVPPGRKIRVVQVG--- 697

Query: 745 EDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
                            + CGGTH  +T E     +L  E I  G+ R     
Sbjct: 698 --------------DDVQACGGTHCRSTGEIGMLKILKVESIQDGVIRFEFAA 736
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A Length = 465 Back     alignment and structure
>3hy0_A Alanyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, protein biosynthesis, NUC binding, amino acid-binding, ATP-binding, metal-binding; HET: G5A EPE; 1.90A {Escherichia coli} PDB: 3hxz_A* 3hy1_A* 3hxv_A* 3hxu_A* 3hxw_A* 3hxx_A* 3hxy_A* Length = 441 Back     alignment and structure
>2zze_A Alanyl-tRNA synthetase; ligase, hydrolase; HET: MLY; 2.16A {Pyrococcus horikoshii} PDB: 2zzf_A 2zzg_A* Length = 752 Back     alignment and structure
>2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2 Length = 216 Back     alignment and structure
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens} Length = 241 Back     alignment and structure
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A Length = 157 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 Back     alignment and structure
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1009
d1riqa2236 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) 7e-91
d1riqa1221 a.203.1.1 (A:237-457) Putative anticodon-binding d 7e-46
d2e1ba2129 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C 4e-27
d1v4pa_151 d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeo 1e-23
d1nyra3179 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrR 3e-13
d1tkea2162 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrR 2e-12
d2e1ba187 b.43.3.6 (A:1-87) AlaX-M trans-editing enzyme, N-t 3e-12
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]} Length = 236 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Alanyl-tRNA synthetase (AlaRS)
species: Aquifex aeolicus [TaxId: 63363]

 Score =  287 bits (735), Expect = 7e-91
 Identities = 124/253 (49%), Positives = 163/253 (64%), Gaps = 22/253 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FFE K H   KS+P+VP NDPTLLF NAGM  +K +FLG           
Sbjct: 4   AHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPY----- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA + QKC+R  GKHNDL+ VG  + HHTFFEMLGN+SFGDYFK EAIE+AWE +T+V 
Sbjct: 59  KRATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP ++LY + +  D         EA  IW +   +P+ R+   G +DNFW+MGD GPCG
Sbjct: 119 KLPKEKLYVSVYKDD--------EEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCG 170

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           P SEI+ DR             D   +EIWN+VF+Q+NR+ +G L PLP  ++DTG+G E
Sbjct: 171 PSSEIYVDRGEE-------YEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLE 223

Query: 298 RLTSILQNKMSNY 310
           R+ S+LQ K SN+
Sbjct: 224 RIASVLQGKNSNF 236
>d1riqa1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]} Length = 221 Back     information, alignment and structure
>d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 129 Back     information, alignment and structure
>d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 151 Back     information, alignment and structure
>d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 179 Back     information, alignment and structure
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Length = 162 Back     information, alignment and structure
>d2e1ba1 b.43.3.6 (A:1-87) AlaX-M trans-editing enzyme, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 87 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1009
d1riqa2236 Alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [ 100.0
d1riqa1221 Putative anticodon-binding domain of alanyl-tRNA s 100.0
d2e1ba2129 AlaX-M trans-editing enzyme, C-terminal domain {Py 99.96
d1v4pa_151 Hypothetical protein PH0574 {Archaeon Pyrococcus h 99.95
d1nyra3179 Threonyl-tRNA synthetase (ThrRS), second 'addition 99.95
d1tkea2162 Threonyl-tRNA synthetase (ThrRS), second 'addition 99.82
d2e1ba187 AlaX-M trans-editing enzyme, N-terminal domain {Py 99.39
d1j5wa_281 Glycyl-tRNA synthetase (GlyRS) alpha chain {Thermo 97.07
d1nnha_293 Hypothetical protein PF1951 {Archaeon Pyrococcus f 81.5
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Alanyl-tRNA synthetase (AlaRS)
species: Aquifex aeolicus [TaxId: 63363]

Probab=100.00  E-value=0  Score=811.16  Aligned_cols=234  Identities=53%  Similarity=1.008  Sum_probs=225.7

Q ss_pred             CCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78946999999975421998361588875589997331113344665444466699986665654333354412489889
Q 001826           57 EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHN  136 (1009)
Q Consensus        57 ~~~~~eiR~~fl~fF~~~~H~~v~s~slvp~~d~tllF~nAGm~~fk~~flG~~~p~~~~~~~~r~~~~QkCiR~gGkhn  136 (1009)
                      .|+++|||++||+||++|||+++|||||||+||||||||||||+||||||+|.++|+.     +|+|++|||||+|||||
T Consensus         1 ~mt~~eiR~~Fl~FF~~~gH~~v~s~slvp~~DptlLFtnAGM~~Fkp~flG~~~p~~-----~r~~~~QkCiR~~gk~n   75 (236)
T d1riqa2           1 SLSAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPY-----KRATSCQKCLRVSGKHN   75 (236)
T ss_dssp             CCCHHHHHHHHHHHHHHTTCEECCCCCSSCTTCTTCSSCCSTTGGGHHHHTTSSCCSC-----SEEEEEEEEECEETTEE
T ss_pred             CCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCC-----CCCCCCCCCCCCCCCCC
T ss_conf             9988999999999998679988578773569999746541010222666467645677-----76444321401167430


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHC--CC
Q ss_conf             8778787888530000025654443338989999998711013889996299997799768999957899998830--99
Q 001826          137 DLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LP  214 (1009)
Q Consensus       137 Dld~VG~t~rHhTfFEMlGn~SFgdYfK~eai~~awe~Lt~~l~l~~~rL~vT~~~~~~~~~~~~D~E~~~iW~~~--~~  214 (1009)
                      ||||||+|+|||||||||||||||||||+|||.|||||||++|+|||+|||||||++        |+|++++|.+.  +|
T Consensus        76 Dld~VG~t~rH~TfFEMLGn~SFgdYfK~eai~~awe~lt~~l~l~~~rl~vtv~~~--------D~e~~~~w~~~~gi~  147 (236)
T d1riqa2          76 DLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKD--------DEEAYRIWNEHIGIP  147 (236)
T ss_dssp             CTTTTTTSSSCCSEEEEEEEEESSSCCHHHHHHHHHHHHHHTSCCCGGGEEEEEETT--------CHHHHHHHHTTTCCC
T ss_pred             HHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--------CHHHHHHHHHHCCCC
T ss_conf             223138765311055543520138602888999999998888515764247875157--------489988887604820


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99733688877864579978886864677514799887777889999647983100112233899953569989565563
Q 001826          215 ASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL  294 (1009)
Q Consensus       215 ~~~i~~~~~~dNfW~mG~~GpcGPCsEi~yd~~~~~~~~~~~~~~~~~~lEiwNlVFmq~~~~~~g~l~~L~~~~iDtGm  294 (1009)
                      ++||+++|.+||||+||++||||||||||||+++..       .+++|||||||||||||+|.++|++.|||+|+|||||
T Consensus       148 ~~rI~~~~~~dNfW~~g~~GpcGPcsEi~yd~g~~~-------~~~~r~lEIwNlVFmqy~~~~~G~~~~L~~k~IDTGm  220 (236)
T d1riqa2         148 SERIWRLGEEDNFWQMGDVGPCGPSSEIYVDRGEEY-------EGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGM  220 (236)
T ss_dssp             GGGEEEECHHHHEEESSSSEEEEEEEEEEEECCTTS-------CHHHHEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCC-------CCCCCEEEEEEEEHEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             044153377777240689777776534787133333-------7897656631100100010689865438897165896


Q ss_pred             CHHHHHHHHCCCCCCC
Q ss_conf             1899999880999975
Q 001826          295 GFERLTSILQNKMSNY  310 (1009)
Q Consensus       295 GlERl~~vlqg~~sny  310 (1009)
                      |||||+||+||++|||
T Consensus       221 GLERi~~vlqg~~s~y  236 (236)
T d1riqa2         221 GLERIASVLQGKNSNF  236 (236)
T ss_dssp             EHHHHHHHHTTCSSGG
T ss_pred             CHHHHHHHHCCCCCCC
T ss_conf             6999999985999899
>d1riqa1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2e1ba1 b.43.3.6 (A:1-87) AlaX-M trans-editing enzyme, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1j5wa_ d.104.1.1 (A:) Glycyl-tRNA synthetase (GlyRS) alpha chain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure