Citrus Sinensis ID: 001837
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1007 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SZW4 | 951 | Cadmium/zinc-transporting | yes | no | 0.782 | 0.828 | 0.638 | 0.0 | |
| O64474 | 1172 | Putative cadmium/zinc-tra | no | no | 0.704 | 0.604 | 0.692 | 0.0 | |
| P0CW78 | 760 | Cadmium/zinc-transporting | no | no | 0.748 | 0.992 | 0.622 | 0.0 | |
| P0CW77 | 542 | Putative inactive cadmium | no | no | 0.533 | 0.990 | 0.649 | 0.0 | |
| Q6GIX1 | 726 | Probable cadmium-transpor | yes | no | 0.571 | 0.793 | 0.368 | 1e-108 | |
| P37386 | 804 | Probable cadmium-transpor | yes | no | 0.571 | 0.716 | 0.365 | 1e-106 | |
| P30336 | 723 | Probable cadmium-transpor | yes | no | 0.573 | 0.799 | 0.361 | 1e-106 | |
| P20021 | 727 | Probable cadmium-transpor | yes | no | 0.573 | 0.795 | 0.363 | 1e-106 | |
| Q60048 | 711 | Probable cadmium-transpor | yes | no | 0.676 | 0.957 | 0.331 | 1e-103 | |
| P58414 | 707 | Probable cadmium-transpor | yes | no | 0.571 | 0.814 | 0.345 | 2e-97 |
| >sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/818 (63%), Positives = 640/818 (78%), Gaps = 30/818 (3%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K KSYFDVLGICC+SEVPLIENIL S++GVKE SVIVPSRTVIV+HD L++SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQA+ EANVR G T+++ KWPSP+A+ G+LL +S KY+Y P RW A+ AV GI+
Sbjct: 64 ALNQAQLEANVRVTGETNFKNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI+ K +A++ F++DINILV++ V TI M DY EA ++VFLFTIAEWL+SRAS+KA+A
Sbjct: 124 PILAKAVASLARFRIDINILVVVTVGATIGMQDYTEAAVVVFLFTIAEWLQSRASYKASA 183
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM SLMS+APQKA+IA TGEEV+ E+K NTV+AVKAGE IPIDG+VVDG CEVDEKTLT
Sbjct: 184 VMQSLMSLAPQKAVIAETGEEVEVDELKTNTVIAVKAGETIPIDGVVVDGNCEVDEKTLT 243
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GE++PV K K STVWAGTINLNGYI+V TTA+AEDCVVAKMAKLVEEAQNSK+ QRF+D
Sbjct: 244 GEAFPVPKLKDSTVWAGTINLNGYITVNTTALAEDCVVAKMAKLVEEAQNSKTETQRFID 303
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K S+YYTPA+I IS C IP AL V N K W HLALVVLVSACPC LILSTPV T+CAL
Sbjct: 304 KCSKYYTPAIILISICFVAIPFALKVHNLKHWVHLALVVLVSACPCGLILSTPVATFCAL 363
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSGLLIKG DYL+TLAK++ +AFDKTGTITRGEF++ +FQ LSEDI+L +LLYWVS
Sbjct: 364 TKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQSLLYWVS 423
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQR 486
S ESKSSHPM+AA+V+Y RS+S+EPKPE VEDYQNFPGEGIYGKI G+E+YIGN++IA R
Sbjct: 424 STESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIGNKRIASR 483
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AGC +VP +D G TIGY++ G + G+F LSDACR+G A+A+ +LKSLGI+ AMLT
Sbjct: 484 AGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLGIKIAMLT 543
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK-QEGKTAMIGDGINDAPALATA 605
GDN +AAM AQEQLGNA+++V +ELLPEDK++II Q K +EG TAM+GDG+NDAPALATA
Sbjct: 544 GDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLNDAPALATA 603
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIA 665
DIGISMG+SGSALATETG +ILMSNDIR++P+AI+LA++A KV+EN+ +SI K I+A
Sbjct: 604 DIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISITMKGAILA 663
Query: 666 LALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSS---------HT 716
LA GHPL+WAAVLADVGTCL+VILNSMLLL + H KC + SSSSS
Sbjct: 664 LAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIAEKLEGDA 723
Query: 717 HKHIKKCCNP--SGKHCKSS-AANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDN--- 770
++ P S KHCK +T++ K ++S++ H+H C++ DN
Sbjct: 724 AGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSD-HSHSGCCETKQ---KDNVTV 779
Query: 771 -QQLCCSDSKAQNRCEPEDYSSHGCDSRSNDSGSRSPN 807
++ CC+ EP D HG DS S+ P+
Sbjct: 780 VKKSCCA--------EPVDL-GHGHDSGCCGDKSQQPH 808
|
Plays an important role in zinc transport and homeostasis. Could also be involved in cadmium detoxification. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 5 |
| >sp|O64474|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis thaliana GN=HMA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/710 (69%), Positives = 603/710 (84%), Gaps = 1/710 (0%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
QKSYFDVLGICC+SEVP+IENILKSL+GVKE SVIVPSRTVIV+HD+LLIS QI KALN
Sbjct: 17 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN 76
Query: 70 QARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPII 129
+AR EANVR G TS++ KWPSP+A+ G+LL +S LK+VY PLRW A+ AVA GI+PI+
Sbjct: 77 EARLEANVRVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAVAAGIYPIL 136
Query: 130 LKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMS 189
K A+I+ ++DINILV+I VI T+AM D++EA +VFLFTI++WLE+RAS+KAT+VM
Sbjct: 137 AKAFASIKRPRIDINILVIITVIATLAMQDFMEAAAVVFLFTISDWLETRASYKATSVMQ 196
Query: 190 SLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGES 249
SLMS+APQKAIIA TGEEV+ EVK++TV+AVKAGE IPIDGIVVDG CEVDEKTLTGE+
Sbjct: 197 SLMSLAPQKAIIAETGEEVEVDEVKVDTVVAVKAGETIPIDGIVVDGNCEVDEKTLTGEA 256
Query: 250 YPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS 309
+PV KQ+ STVWAGTINLNGYI V+TT++A DCVVAKMAKLVEEAQ+SK++ QR +DK S
Sbjct: 257 FPVPKQRDSTVWAGTINLNGYICVKTTSLAGDCVVAKMAKLVEEAQSSKTKSQRLIDKCS 316
Query: 310 QYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKA 369
QYYTPA+I +SACVA++P+ + V N K WFHLALVVLVS CPC LILSTPV T+CALTKA
Sbjct: 317 QYYTPAIILVSACVAIVPVIMKVHNLKHWFHLALVVLVSGCPCGLILSTPVATFCALTKA 376
Query: 370 ATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIE 429
ATSGLLIK DYL TL+K++ +AFDKTGTITRGEF++ +F+ LS DINL +LLYWVSS+E
Sbjct: 377 ATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIVIDFKSLSRDINLRSLLYWVSSVE 436
Query: 430 SKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGC 489
SKSSHPM+A +V+Y +S+S+EP+PE+VEDYQNFPGEGIYGKI G +I+IGN+KIA RAGC
Sbjct: 437 SKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIFIGNKKIASRAGC 496
Query: 490 GTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDN 549
TVP ++ G T+GY++ G G F LSDACR+G ++A+ +LKSLGI+TAMLTGDN
Sbjct: 497 STVPEIEVDTKGGKTVGYVYVGERLAGFFNLSDACRSGVSQAMAELKSLGIKTAMLTGDN 556
Query: 550 QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGI 609
Q+AAM AQEQLGN L+VVH +LLPEDK++II +FK+EG TAM+GDG+NDAPALATADIGI
Sbjct: 557 QAAAMHAQEQLGNVLDVVHGDLLPEDKSRIIQEFKKEGPTAMVGDGVNDAPALATADIGI 616
Query: 610 SMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG 669
SMGISGSALAT+TG +ILMSNDIR++P+A++LAR+A KV+EN+ +SI KAGI+ALA
Sbjct: 617 SMGISGSALATQTGNIILMSNDIRRIPQAVKLARRARRKVVENVCLSIILKAGILALAFA 676
Query: 670 GHPLVWAAVLADVGTCLIVILNSMLLLHE-THTHRGKCIKSSSSSSHTHK 718
GHPL+WAAVL DVGTCL+VI NSMLLL E KC ++S+S + K
Sbjct: 677 GHPLIWAAVLVDVGTCLLVIFNSMLLLREKKKIGNKKCYRASTSKLNGRK 726
|
Involved in cadmium/zinc transport. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|P0CW78|HMA3B_ARATH Cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana GN=HMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/777 (62%), Positives = 596/777 (76%), Gaps = 23/777 (2%)
Query: 1 MAAAQERK---YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDAL 57
MA +E K Q SYFDV+GICCSSEV ++ N+L+ ++GVKE SVIVPSRTVIV+HD
Sbjct: 1 MAEGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTF 60
Query: 58 LISQHQIVKALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFA 117
LIS QIVKALNQAR EA+VR YG TS + +WPSP+A+ GVLL +S KY Y PL W A
Sbjct: 61 LISPLQIVKALNQARLEASVRPYGETSLKSQWPSPFAIVSGVLLVLSFFKYFYSPLEWLA 120
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+ AV G+FPI+ K +A++ F+LDIN L LIAVI T+ M D+ EA IVFLF++A+WLE
Sbjct: 121 IVAVVAGVFPILAKAVASVTRFRLDINALTLIAVIATLCMQDFTEAATIVFLFSVADWLE 180
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237
S A+HKA+ VMSSLMS+AP+KA+IA TG EVD EV +NTV++VKAGE IPIDG+VVDG
Sbjct: 181 SSAAHKASIVMSSLMSLAPRKAVIADTGLEVDVDEVGINTVVSVKAGESIPIDGVVVDGS 240
Query: 238 CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNS 297
C+VDEKTLTGES+PVSKQ+ STV A TINLNGYI V+TTA+A DCVVAKM KLVEEAQ S
Sbjct: 241 CDVDEKTLTGESFPVSKQRESTVMAATINLNGYIKVKTTALARDCVVAKMTKLVEEAQKS 300
Query: 298 KSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILS 357
+++ QRF+DK S+YYTPAV+ +AC AVIP+ L V + WFHLALVVLVS CPC LILS
Sbjct: 301 QTKTQRFIDKCSRYYTPAVVVSAACFAVIPVLLKVQDLSHWFHLALVVLVSGCPCGLILS 360
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN 417
TPV T+CALTKAATSG LIK GD L+TLAK++ +AFDKTGTIT+ EF++S+F+ LS IN
Sbjct: 361 TPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDFRSLSPSIN 420
Query: 418 LNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIY 477
L+ LL WVSSIE KSSHPM+AAL++Y S+S+EPKP+ VE++QNFPGEG+YG+I G++IY
Sbjct: 421 LHKLLNWVSSIECKSSHPMAAALIDYAISVSVEPKPDIVENFQNFPGEGVYGRIDGQDIY 480
Query: 478 IGNRKIAQRAGCGT--VPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL 535
IGN++IAQRAGC T VP ++ +G TIGYI+ GA G F L D CR G A+A+ +L
Sbjct: 481 IGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYGVAQALKEL 540
Query: 536 KSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDG 595
KSLGI+TAMLTGDNQ AAM QEQL NAL++VHSELLP+DKA+II+ FK +G T M+GDG
Sbjct: 541 KSLGIQTAMLTGDNQDAAMSTQEQLENALDIVHSELLPQDKARIIDDFKIQGPTMMVGDG 600
Query: 596 INDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAV 655
+NDAPALA ADIGISMGISGSALATETG +ILMSNDIRK+P+ +RLA+++H KVIEN+ +
Sbjct: 601 LNDAPALAKADIGISMGISGSALATETGDIILMSNDIRKIPKGMRLAKRSHKKVIENVVL 660
Query: 656 SIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSH 715
S++ K I+ L G+PLVWAAVLAD GTCL+VILNSM+LL + C +SS+SS
Sbjct: 661 SVSIKGAIMVLGFVGYPLVWAAVLADAGTCLLVILNSMILLRDEREAVSTCYRSSTSSPV 720
Query: 716 THKHIKKCCNPSGKHCKSSAANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDNQQ 772
+ + G KS +T K CC GC S P DNQQ
Sbjct: 721 KLEEDEVEDLEVGLLQKS---EETSKKS--CC----------SGCCSG---PKDNQQ 759
|
In an heterologous system, involved in cadmium and lead transport, but not in zinc transport. May have a detoxification function through a vacuolar sequestration. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|P0CW77|HMA3A_ARATH Putative inactive cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana GN=HMA3 PE=5 SV=1 | Back alignment and function description |
|---|
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/542 (64%), Positives = 434/542 (80%), Gaps = 5/542 (0%)
Query: 1 MAAAQERK---YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDAL 57
MA +E K Q SYFDV+GICCSSEV ++ N+L+ ++GVKE SVIVPSRTVIV+HD
Sbjct: 1 MAEGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTF 60
Query: 58 LISQHQIVKALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFA 117
LIS QIVKALNQAR EA+VR YG TS + +WPSP+A+ GVLL +S KY Y PL W A
Sbjct: 61 LISPLQIVKALNQARLEASVRPYGETSLKSQWPSPFAIVSGVLLVLSFFKYFYSPLEWLA 120
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+ AV G+FPI+ K +A++ F+LDIN L LIAVI T+ M D+ EA IVFLF++A+WLE
Sbjct: 121 IVAVVAGVFPILAKAVASVTRFRLDINALTLIAVIATLCMQDFTEAATIVFLFSVADWLE 180
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237
S A+HKA+ VMSSLMS+AP+KA+IA TG EVD EV +NTV++VKAGE IPIDG+VVDG
Sbjct: 181 SSAAHKASIVMSSLMSLAPRKAVIADTGLEVDVDEVGINTVVSVKAGESIPIDGVVVDGS 240
Query: 238 CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNS 297
C+VDEKTLTGES+PVSKQ+ STV A TINLNGYI V+TTA+A DCVVAKM KLVEEAQ S
Sbjct: 241 CDVDEKTLTGESFPVSKQRESTVMAATINLNGYIKVKTTALARDCVVAKMTKLVEEAQKS 300
Query: 298 KSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILS 357
+++ QRF+DK S+YYTPAV+ +AC AVIP+ L V + WFHLALVVLVS CPC LILS
Sbjct: 301 QTKTQRFIDKCSRYYTPAVVVSAACFAVIPVLLKVQDLSHWFHLALVVLVSGCPCGLILS 360
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN 417
TPV T+CALTKAATSG LIK GD L+TLAK++ +AFDKTGTIT+ EF++S+F+ LS IN
Sbjct: 361 TPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDFRSLSPSIN 420
Query: 418 LNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIY 477
L+ LLYWVSSIE KSSHPM+AAL++Y RS+S+EPKP+ VE++QNFPGEG+YG+I G++IY
Sbjct: 421 LHKLLYWVSSIECKSSHPMAAALIDYARSVSVEPKPDIVENFQNFPGEGVYGRIDGQDIY 480
Query: 478 IGNRKIAQRAGCGT--VPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL 535
IGN++IAQRAGC T VP ++ +G TIGYI+ GA G F L D CR G A+A+ +L
Sbjct: 481 IGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYGVAQALKEL 540
Query: 536 KS 537
KS
Sbjct: 541 KS 542
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 348/591 (58%), Gaps = 15/591 (2%)
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+G++ IG + + G + F D+ L+ +AVIG + ++ EA I+V LF I+E LE
Sbjct: 136 VGSIVIGGYSLFKVGFQNLIRFDFDMKTLMTVAVIGAAIIGEWAEASIVVVLFAISEALE 195
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEV--DAGEVKLNTVLAVKAGEVIPIDGIVVD 235
+ +A + SLM IAP++A++ G+E+ ++ + ++ VK GE I +DGI+++
Sbjct: 196 RFSMDRARQSIRSLMDIAPKEALVMRNGQEIMIHVDDIAVGDIMIVKPGEKIAMDGIIIN 255
Query: 236 GKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
G V++ +TGES PV+K V+AGT+N G + V+ T ED ++K+ LVEEAQ
Sbjct: 256 GVSAVNQAAITGESVPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQ 315
Query: 296 NSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALI 355
++ Q FVDKF++YYTP ++ I+A VAV+P + W + L VLV CPCAL+
Sbjct: 316 GERAPAQAFVDKFAKYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALV 375
Query: 356 LSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED 415
+STP+ A+ AA G+LIKGG YL+ L ++ +AFDKTGT+T+G V+++F+ L++
Sbjct: 376 ISTPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLNDQ 435
Query: 416 INLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEE 475
+ L ++++E +S HP+++A+++ +I VED+ + G GI G I G
Sbjct: 436 VEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVEDFTSITGRGIQGNIDGTT 495
Query: 476 IYIGNRKIAQRAGCGTVPSVDGPKMK-----GNTIGYIFSGASPVGIFCLSDACRTGAAE 530
YIG+ ++ + K+K G T I + + +G+ ++D R +
Sbjct: 496 YYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETSKN 555
Query: 531 AVNQLKSLGIR-TAMLTGDNQSAAMQAQEQLGNALNV--VHSELLPEDKAKIINQFKQE- 586
+ +L LGI+ T MLTGDNQ A E +G + V + SEL+P+DK I + K E
Sbjct: 556 VIQKLHQLGIKQTIMLTGDNQGTA----EAIGAHVGVSDIQSELMPQDKLDYIKKMKAEH 611
Query: 587 GKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAH 646
G AMIGDG+NDAPALA + +GI+MG +G+ A ET + LM +D+ K+P A+RL+RK
Sbjct: 612 GNVAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRKTL 671
Query: 647 WKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697
+ NI +I K + L + G +W A+L+D+G ++V LNS+ L+
Sbjct: 672 NIIKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 722
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 347/591 (58%), Gaps = 15/591 (2%)
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+ ++ IG + + G + F D+ L+ +AVIG + ++ EA I+V LF I+E LE
Sbjct: 214 VSSIVIGGYSLFKVGFQNLIRFDFDMKTLMTVAVIGAAIIGEWAEASIVVILFAISEALE 273
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEV--DAGEVKLNTVLAVKAGEVIPIDGIVVD 235
+ +A + SLM IAP++A++ G+E+ ++ + ++ VK GE I +DGI+++
Sbjct: 274 RFSMDRARQSIRSLMDIAPKEALVRRNGQEIMIHVDDIAVGDIMIVKPGEKIAMDGIIIN 333
Query: 236 GKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
G V++ +TGES PV+K V+AGT+N G + V+ T ED ++K+ LVEEAQ
Sbjct: 334 GVSAVNQAAITGESVPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQ 393
Query: 296 NSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALI 355
++ Q FVDKF++YYTP ++ I+A VAV+P + W + L VLV CPCAL+
Sbjct: 394 GERAPAQAFVDKFAKYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALV 453
Query: 356 LSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED 415
++TP+ A+ AA G+LIKGG YL+ L ++ +AFDKTGT+T+G V+++F+ L++
Sbjct: 454 ITTPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLNDQ 513
Query: 416 INLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEE 475
+ L ++++E +S HP+++A+++ +I V+D+ + G GI G I G
Sbjct: 514 VEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVKDFTSITGRGIQGNIDGTT 573
Query: 476 IYIGNRKIAQRAGCGTVPSVDGPKMK-----GNTIGYIFSGASPVGIFCLSDACRTGAAE 530
YIG+ ++ + K+K G T I + + +G+ ++D R +
Sbjct: 574 YYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETSKN 633
Query: 531 AVNQLKSLGIR-TAMLTGDNQSAAMQAQEQLGNALNV--VHSELLPEDKAKIINQFKQE- 586
+ +L LGI+ T MLTGDNQ A E +G + V + SELLP+DK I + K E
Sbjct: 634 VILKLHQLGIKQTIMLTGDNQGTA----EAIGAHVGVSDIQSELLPQDKLDYIKKMKAEH 689
Query: 587 GKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAH 646
G AMIGDG+NDAPALA + +GI+MG +G+ A ET + LM +D+ K+P A+RL+RK
Sbjct: 690 GNVAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRKTL 749
Query: 647 WKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697
+ NI +I K + L + G +W A+L+D+G ++V LNS+ L+
Sbjct: 750 NIIKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 800
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P30336|CADA_BACPE Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus (strain OF4) GN=cadA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 349/589 (59%), Gaps = 11/589 (1%)
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
L ++ IG + GL + F+ D+ L+ +AVIG + ++ E I+V LF I+E LE
Sbjct: 134 LASMFIGGLSLFKVGLQNLLRFEFDMKTLMTVAVIGGAIIGEWAEVAIVVILFAISEALE 193
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEV--DAGEVKLNTVLAVKAGEVIPIDGIVVD 235
+ +A + SLM IAP++A++ G+E+ ++ + ++ VK G+ I +DG+VV
Sbjct: 194 RFSMDRARQSIRSLMDIAPKEALVKRNGQEIMIHVDDIAVGDIMIVKPGQKIAMDGVVVS 253
Query: 236 GKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
G V++ +TGES PV K + V+AGT+N G + VE T + ED ++K+ LVEEAQ
Sbjct: 254 GYSAVNQAAITGESVPVEKTVDNEVFAGTLNEEGLLEVEITKLVEDTTISKIIHLVEEAQ 313
Query: 296 NSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALI 355
++ Q FVDKF++YYTP ++ I+A VA++P + + W + L VLV CPCAL+
Sbjct: 314 GERAPSQAFVDKFAKYYTPIIMIIAALVAIVPPLFFDGSWETWIYQGLAVLVVGCPCALV 373
Query: 356 LSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED 415
+STP+ A+ AA G+L+KGG YL+ + ++ +AFDKTGT+T+G ++++ L++
Sbjct: 374 ISTPISIVSAIGNAAKKGVLVKGGVYLEEMGALKAIAFDKTGTLTKGVPAVTDYNVLNKQ 433
Query: 416 INLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEE 475
IN LL ++++E +S HP+++A+++ +I VED+ + G+GI G + G
Sbjct: 434 INEKELLSIITALEYRSQHPLASAIMKKAEEENITYSDVQVEDFSSITGKGIKGIVNGTT 493
Query: 476 IYIGNRKIAQRAGCGTV-----PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAE 530
YIG+ K+ + +V + +G T I + + + ++D R + E
Sbjct: 494 YYIGSPKLFKELLTNDFDKDLEQNVTTLQNQGKTAMIIGTEKEILAVIAVADEVRESSKE 553
Query: 531 AVNQLKSLGI-RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-GK 588
+ +L LGI +T MLTGDN+ A Q+G ++ + +EL+P+DK I Q + E G
Sbjct: 554 ILQKLHQLGIKKTIMLTGDNKGTANAIGGQVG--VSDIEAELMPQDKLDFIKQLRSEYGN 611
Query: 589 TAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWK 648
AM+GDG+NDAPALA + +GI+MG +G+ A ET V LM +D+RK+P ++L+RK
Sbjct: 612 VAMVGDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLRKLPFTVKLSRKTLNI 671
Query: 649 VIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697
+ NI +IA K + L + G +W A+L+D+G L+V LN + L+
Sbjct: 672 IKANITFAIAIKFIALLLVIPGWLTLWIAILSDMGATLLVALNGLRLMR 720
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Bacillus pseudofirmus (strain OF4) (taxid: 398511) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P20021|CADA1_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/589 (36%), Positives = 346/589 (58%), Gaps = 11/589 (1%)
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+G++ IG + + G + F D+ L+ +AVIG + + EA I+V LF I+E LE
Sbjct: 137 VGSIVIGGYSLFKVGFQNLIRFDFDMKTLMTVAVIGATIIGKWAEASIVVILFAISEALE 196
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEV--DAGEVKLNTVLAVKAGEVIPIDGIVVD 235
+ ++ + SLM IAP++A++ G+E+ ++ + ++ VK GE I +DGI+V+
Sbjct: 197 RFSMDRSRQSIRSLMDIAPKEALVRRNGQEIIIHVDDIAVGDIMIVKPGEKIAMDGIIVN 256
Query: 236 GKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
G V++ +TGES PVSK V+AGT+N G I V+ T ED + K+ LVEEAQ
Sbjct: 257 GLSAVNQAAITGESVPVSKAVDDEVFAGTLNEEGLIEVKITKYVEDTTITKIIHLVEEAQ 316
Query: 296 NSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALI 355
++ Q FVDKF++YYTP ++ I+A VAV+P + W + L VLV CPCAL+
Sbjct: 317 GERAPAQAFVDKFAKYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALV 376
Query: 356 LSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED 415
+STP+ A+ AA G+L+KGG YL+ L ++ +AFDKTGT+T+G V+++F+ L++
Sbjct: 377 ISTPISIVSAIGNAAKKGVLVKGGVYLEKLGAIKTVAFDKTGTLTKGVPVVTDFEVLNDQ 436
Query: 416 INLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEE 475
+ L ++++E +S HP+++A+++ +I VE++ + G GI G + G
Sbjct: 437 VEEKELFSIITALEYRSQHPLASAIMKKAEQDNIPYSNVQVEEFTSITGRGIKGIVNGTT 496
Query: 476 IYIGNRKIAQRAGC-----GTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAE 530
YIG+ K+ + G +V + +G T I + + +G+ ++D R +
Sbjct: 497 YYIGSPKLFKELNVSDFSLGFENNVKILQNQGKTAMIIGTEKTILGVIAVADEVRETSKN 556
Query: 531 AVNQLKSLGIR-TAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-GK 588
+ +L LGI+ T MLTGDNQ A +G ++ + SEL+P+DK I + + E
Sbjct: 557 VIQKLHQLGIKQTIMLTGDNQGTANAIGTHVG--VSDIQSELMPQDKLDYIKKMQSEYDN 614
Query: 589 TAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWK 648
AMIGDG+NDAPALA + +GI+MG +G+ A ET + LM +D+ K+P A+RL+RK
Sbjct: 615 VAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRKTLNI 674
Query: 649 VIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697
+ NI +I K + L + G +W A+L+D+G ++V LNS+ L+
Sbjct: 675 IKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 723
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes GN=cadA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/711 (33%), Positives = 395/711 (55%), Gaps = 30/711 (4%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K+ + V G+ C++ E +K +EGV E V + + V +A I Q + A
Sbjct: 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-IQQVEQAGAFE 61
Query: 70 QARFEANVRAYGG----TSYQ----KKWPSPYAMACGVLLAISILKYV-----YHPLRWF 116
+ ++ T +Q K W + G+ +A+ + ++
Sbjct: 62 HLKIIPEKESFTDPEHFTDHQSFIRKNW---RLLLSGLFIAVGYASQIMNGEDFYLTNAL 118
Query: 117 ALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWL 176
+ A+ IG + + +G + F+ + L+ IA+IG + ++ E I+V LF ++E L
Sbjct: 119 FIFAIFIGGYSLFKEGFKNLLKFEFTMETLMTIAIIGAAFIGEWAEGSIVVILFAVSEAL 178
Query: 177 ESRASHKATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVV 234
E + KA + SLM IAP++A++ +GT V ++++ ++ +K G+ I +DG VV
Sbjct: 179 ERYSMDKARQSIRSLMDIAPKEALVRRSGTDRMVHVDDIQIGDIMIIKPGQKIAMDGHVV 238
Query: 235 DGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEA 294
G V++ +TGES PV K +V+AGT+N G + V T ED ++K+ LVEEA
Sbjct: 239 KGYSAVNQAAITGESIPVEKNIDDSVFAGTLNEEGLLEVAVTKRVEDTTISKIIHLVEEA 298
Query: 295 QNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCAL 354
Q ++ Q FVD F++YYTPA+I I+A +A +P L N + W + L VLV CPCAL
Sbjct: 299 QGERAPAQAFVDTFAKYYTPAIIVIAALIATVPPLLFGGNWETWVYQGLSVLVVGCPCAL 358
Query: 355 ILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSE 414
++STPV A+ AA +G+L+KGG YL+ + ++ +AFDKTGT+T+G V++++ L+E
Sbjct: 359 VVSTPVAIVTAIGNAAKNGVLVKGGVYLEEIGGLKAIAFDKTGTLTKGVPVVTDYIELTE 418
Query: 415 DINL--NTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIG 472
N+ N ++++E S HP+++A+++YG + ++ +V D+ + G+GI G +
Sbjct: 419 ATNIQHNKNYIIMAALEQLSQHPLASAIIKYGETREMDLTSINVNDFTSITGKGIRGTVD 478
Query: 473 GEEIYIGN-----RKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTG 527
G Y+G+ +A + V ++KG T + + I ++D R+
Sbjct: 479 GNTYYVGSPVLFKELLASQFTDSIHRQVSDLQLKGKTAMLFGTNQKLISIVAVADEVRSS 538
Query: 528 AAEAVNQLKSLGI-RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK-Q 585
+ + +L LGI +T MLTGDNQ+ A +Q+G ++ + EL+P+DK I Q K
Sbjct: 539 SQHVIKRLHELGIEKTIMLTGDNQATAQAIGQQVG--VSEIEGELMPQDKLDYIKQLKIN 596
Query: 586 EGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKA 645
GK AM+GDGINDAPALA A +GI+MG +G+ A ET V LM +D++K+P ++L+RK
Sbjct: 597 FGKVAMVGDGINDAPALAAATVGIAMGGAGTDTAIETADVALMGDDLQKLPFTVKLSRKT 656
Query: 646 HWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
+ +NI S+ K + L + G +W A++AD+G L+V LN + L+
Sbjct: 657 LQIIKQNITFSLVIKLIALLLVIPGWLTLWIAIMADMGATLLVTLNGLRLM 707
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes (taxid: 1639) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (918), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 346/585 (59%), Gaps = 9/585 (1%)
Query: 120 AVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESR 179
A+ +G F + +G A + + L+ IA+IG + ++ E I+V LF +E LE
Sbjct: 122 AIVVGGFNLFKEGFANLIKLDFTMESLMTIAIIGASIIGEWAEGSIVVILFAFSEVLERY 181
Query: 180 ASHKATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237
+ KA + SLM IAP++A+I E + ++++ ++ +K G+ I +DG+V+ G
Sbjct: 182 SMDKARQSIRSLMDIAPKEALIRRDDVEQMIAVSDIQIGDIMIIKPGQKIAMDGVVIKGY 241
Query: 238 CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNS 297
+++ +TGES PV K+ V+AGT+N G + V+ T ED ++K+ LVEEAQ
Sbjct: 242 SAINQSAITGESIPVEKKVDDEVFAGTLNEEGLLEVKVTKHVEDTTISKIIHLVEEAQGE 301
Query: 298 KSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILS 357
++ Q FVDKF++YYTP ++ I+ V V+P + W + L +LV CPC+L++S
Sbjct: 302 RAPAQAFVDKFAKYYTPTIMLIALLVVVVPPLFFGGDWDTWVYQGLSLLVVGCPCSLVIS 361
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN 417
TPV A+ +A +G+L+KGG YL+ + ++ +AFDKTGT+T+G+ V+++F P SE ++
Sbjct: 362 TPVSIVSAIGNSAKNGVLVKGGIYLEEIGGLQAIAFDKTGTLTKGKPVVTDFIPYSEHMD 421
Query: 418 LNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIY 477
L ++++E+ S HP+++A++ +++ K +++++ + G+G+ G++ G Y
Sbjct: 422 EQNSLSIITALETMSQHPLASAIISKAMIDNVDYKSIEIDNFSSITGKGVKGEVNGITYY 481
Query: 478 IGNRKIAQRA---GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQ 534
IG+ K+ + + + + +G T + ++ + I ++D R + E + Q
Sbjct: 482 IGSSKLFESSLEKSQSISQTYQSLQKQGKTAMLFGTESNILAIIAVADEVRESSKEVIAQ 541
Query: 535 LKSLGI-RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-GKTAMI 592
L LGI T MLTGDN A +++G ++ + +EL+PEDK I + KQ GK AMI
Sbjct: 542 LHKLGIAHTIMLTGDNNDTAQFIGKEIG--VSDIKAELMPEDKLTYIKELKQTYGKVAMI 599
Query: 593 GDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIEN 652
GDG+NDAPALA + +GI+MG +G+ A ET V LM +D++K+P + L+RK + +N
Sbjct: 600 GDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLKKLPFIVNLSRKTLKIIKQN 659
Query: 653 IAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697
I S+ K + L L G +W A++AD+G L+V LN + L+
Sbjct: 660 ITFSLGIKLLALLLVLPGWLTLWIAIVADMGATLLVTLNGLRLMK 704
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1007 | ||||||
| 255582930 | 962 | heavy metal cation transport atpase, put | 0.890 | 0.932 | 0.613 | 0.0 | |
| 359484975 | 873 | PREDICTED: cadmium/zinc-transporting ATP | 0.826 | 0.953 | 0.645 | 0.0 | |
| 356564834 | 802 | PREDICTED: cadmium/zinc-transporting ATP | 0.704 | 0.884 | 0.729 | 0.0 | |
| 357479567 | 1047 | Zn/Cd P(IB)-type ATPase [Medicago trunca | 0.972 | 0.935 | 0.563 | 0.0 | |
| 297798966 | 944 | predicted protein [Arabidopsis lyrata su | 0.810 | 0.864 | 0.636 | 0.0 | |
| 449516337 | 1156 | PREDICTED: LOW QUALITY PROTEIN: cadmium/ | 0.743 | 0.647 | 0.691 | 0.0 | |
| 380039660 | 969 | HMA2 transporter [Sedum alfredii] | 0.938 | 0.975 | 0.560 | 0.0 | |
| 449457261 | 1231 | PREDICTED: cadmium/zinc-transporting ATP | 0.725 | 0.593 | 0.697 | 0.0 | |
| 15234620 | 951 | Cd2+/Zn2+-exporting ATPase [Arabidopsis | 0.782 | 0.828 | 0.638 | 0.0 | |
| 356550732 | 1076 | PREDICTED: cadmium/zinc-transporting ATP | 0.687 | 0.643 | 0.727 | 0.0 |
| >gi|255582930|ref|XP_002532236.1| heavy metal cation transport atpase, putative [Ricinus communis] gi|223528070|gb|EEF30145.1| heavy metal cation transport atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/990 (61%), Positives = 717/990 (72%), Gaps = 93/990 (9%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K+QKSYFDVLG+CCSSEVPLIENILKSL+GVKE SVIVP+RTVIV+HD LLISQ QIVK
Sbjct: 11 KKHQKSYFDVLGLCCSSEVPLIENILKSLDGVKEYSVIVPTRTVIVVHDNLLISQLQIVK 70
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQAR EANVR G TS+QKKWPSP+A+A GVLL +S+LK+VYHPL W ALGAVAIGIF
Sbjct: 71 ALNQARLEANVRVKGDTSHQKKWPSPFAVASGVLLLLSLLKFVYHPLHWLALGAVAIGIF 130
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI++K +A++RNF+LD NILVLIAV+GTI + +Y+EAG IVFLFTIAEWLESRA HKA A
Sbjct: 131 PILMKAVASLRNFRLDTNILVLIAVVGTIVLKEYVEAGFIVFLFTIAEWLESRAGHKANA 190
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VMSSLMSI PQKAIIA TGEEVDA EVKLNTVLAVKAGEVIPIDGIVVDG CEVDEKTLT
Sbjct: 191 VMSSLMSITPQKAIIAATGEEVDADEVKLNTVLAVKAGEVIPIDGIVVDGNCEVDEKTLT 250
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GES+PV KQK STVWAGTINLNGYI+V+TTA+AEDCVVAKMAKL
Sbjct: 251 GESFPVPKQKDSTVWAGTINLNGYINVQTTALAEDCVVAKMAKL---------------- 294
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
YYTPAVI IS + V+P+AL V N +WF LALVVLVSACPCALILSTPV T+CAL
Sbjct: 295 ----YYTPAVIIISVSLVVVPLALRVHNRNRWFRLALVVLVSACPCALILSTPVATFCAL 350
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSG+LIKGGD L+TLAK++ MAFDKTGTIT+GEFV+ +F L EDI+L+TL+YWVS
Sbjct: 351 TKAATSGVLIKGGDSLETLAKIKVMAFDKTGTITKGEFVVVDFGSLCEDISLDTLVYWVS 410
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQR 486
SIESKSSHPM+AALV+Y +SLSIEP PE+V ++QNFPGEGI+GKI G+EIYIGN+KI R
Sbjct: 411 SIESKSSHPMAAALVDYAKSLSIEPNPENVVEFQNFPGEGIHGKIDGKEIYIGNKKIGLR 470
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AG GTVP+++ G T+GY++SG +P+GIF LSDACRTG AEAV +LKS+G++TAMLT
Sbjct: 471 AGYGTVPTLETEMKGGKTVGYVYSGGTPIGIFSLSDACRTGVAEAVTKLKSMGVKTAMLT 530
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATAD 606
GD+Q+AAM AQEQLG+AL VV +ELLPEDKA+II +FK+EG TAMIGDG+NDAPALATAD
Sbjct: 531 GDSQAAAMHAQEQLGHALEVVKAELLPEDKARIIEEFKKEGTTAMIGDGVNDAPALATAD 590
Query: 607 IGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIAL 666
IGISMGISGSALATETG VILMSNDIRK+P+ I LARKAH KVIEN+ +S++TK+ I+AL
Sbjct: 591 IGISMGISGSALATETGDVILMSNDIRKIPDVISLARKAHRKVIENVILSMSTKSAILAL 650
Query: 667 ALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKHIKKCCNP 726
A GHPLVWAAVLADVGTCL+VI NSMLLL TH H GKC KSSS++++T K
Sbjct: 651 AFAGHPLVWAAVLADVGTCLLVIFNSMLLLRGTHKHGGKCCKSSSATANTSKRD------ 704
Query: 727 SGKHCKSSAANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDNQQLCCSDSKAQNRCEP 786
+S+E H H CCSD K + C
Sbjct: 705 ---------------------NNSSEHHHH-----------------CCSDRKVETSC-- 724
Query: 787 EDYSSHGCDSRSNDSGSRSPNLCGNNQCCAGSDHGAEEDKLCDHERFNKDDHDIEAQNIH 846
+ S C SR S S CG CA S + K C H+ + D+EA N H
Sbjct: 725 NSHESRSCASRCQASDSSVKPSCGEVHKCAHSADSHDGRKHCQHDT-SSHVVDLEANNPH 783
Query: 847 NCSGYHNSNFSKNNTWPNCFGRKGNCGEDHVNHSV-SEEICLEVTN-HEHQHSHHCSEKH 904
S C NC +H +HS+ +EE ++T +H HS+HC + H
Sbjct: 784 KHS---------------CDKVSTNCISNHSDHSIHTEEATQKMTKADDHCHSNHCEKNH 828
Query: 905 EKNHVH------VTDSGSHSCGHHCPEPIPVIKKCYTDHSEGRHNAAYHMPLGTDQVESS 958
H+ + +SG + HH E IKKC H ++ + + D +
Sbjct: 829 VNIHIEDDSSEDIVESGVNHRPHH-QELHHGIKKCCGGHKSNPGCSSVN-DIHQDLSNTG 886
Query: 959 VAKSACMSLGKRENERCCKSYYMKQCCGDH 988
CMSL KRE CCKS YMK+CCG H
Sbjct: 887 ATIMHCMSLEKRETGGCCKS-YMKECCGKH 915
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484975|ref|XP_002266565.2| PREDICTED: cadmium/zinc-transporting ATPase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/884 (64%), Positives = 681/884 (77%), Gaps = 52/884 (5%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K+QKSYFDVLG+CCSSEVPLIE ILK L+GVKE+SVIVPSRT+IV+HD LLISQ QIVK
Sbjct: 4 KKWQKSYFDVLGLCCSSEVPLIEKILKPLDGVKEISVIVPSRTLIVVHDNLLISQIQIVK 63
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQAR EANVR YG +YQKKWPSP+A+ G+LL +S LKYVY P RW ALGAVA GIF
Sbjct: 64 ALNQARLEANVRIYGEVAYQKKWPSPFAIVSGILLLLSFLKYVYQPFRWLALGAVAAGIF 123
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI +G+ AIRNF LDINILVLIAVIGTIA+NDY EAG IVFLFTIAEWLESRASHKATA
Sbjct: 124 PIAWRGIVAIRNFTLDINILVLIAVIGTIALNDYWEAGSIVFLFTIAEWLESRASHKATA 183
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VMSSLMSIAPQKA+IA TGE V+A V ++T++AVK GEVIPIDGIVV+GKCEVDEK+LT
Sbjct: 184 VMSSLMSIAPQKAVIADTGEIVEANSVLVDTIIAVKTGEVIPIDGIVVEGKCEVDEKSLT 243
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GES+PV+KQK STVWAGTINLNGYISV+TTA+AEDCVVAKMAKLVEEAQNSKS+ QRF+D
Sbjct: 244 GESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKSKTQRFID 303
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K +++YTP V+ ISA +A IP AL V + WFHL+LVVLVSACPCALILSTPV T+CAL
Sbjct: 304 KCTKFYTPVVVLISAGLAGIPAALRVHDLSHWFHLSLVVLVSACPCALILSTPVATFCAL 363
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
+KAA SGLLIKGG+YL+ LAK+R MAFDKTGTITRGEFV+ +FQ L +D++ +TLLYWVS
Sbjct: 364 SKAAVSGLLIKGGEYLEILAKIRIMAFDKTGTITRGEFVVKDFQSLRDDVSSDTLLYWVS 423
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQR 486
SIESKSSHPM+AAL +YG S S+EPKPE+VE++QNFPGEGI+GKI G++IY+GNRKIA R
Sbjct: 424 SIESKSSHPMAAALFDYGLSQSVEPKPENVEEFQNFPGEGIHGKIDGKDIYVGNRKIALR 483
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AGC TVP++ G +G TIGY++S A+P GIF LSDACRTG EA+ +LK LGI++AMLT
Sbjct: 484 AGCETVPTI-GEDKEGKTIGYVYSDATPTGIFTLSDACRTGVVEAIKELKLLGIKSAMLT 542
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATAD 606
GD+ ++AM Q+QLG+ L VVH+ELLPEDKA+II FK+EG TAMIGDG+NDAPALATAD
Sbjct: 543 GDSHASAMHTQDQLGHTLEVVHAELLPEDKARIIKDFKEEGPTAMIGDGVNDAPALATAD 602
Query: 607 IGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIAL 666
IGISMGI+GSALATETG V+LM+NDIRK+P+A+RLARK H KV+EN+ +SI TKA I+AL
Sbjct: 603 IGISMGIAGSALATETGHVVLMTNDIRKIPKAVRLARKTHRKVVENVILSITTKAAILAL 662
Query: 667 ALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKHIKKCCNP 726
A+ GHPL+WAAVLADVGTCL+VI NSMLLL TH H GKC
Sbjct: 663 AIAGHPLIWAAVLADVGTCLLVIFNSMLLLRGTHQHGGKC-------------------- 702
Query: 727 SGKHCKSSAANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDNQQLCCSDSKAQNRCEP 786
CKSSAA+ H +HGCK H S N Q CS+S +Q +CEP
Sbjct: 703 ----CKSSAAS----------------HVDKHGCKGGGSHSSHNHQHSCSNSISQKKCEP 742
Query: 787 EDYSSHGCDSR--------SNDSGSRSPNLCGNNQCCAGSDHGAEEDKLCDHERFNKDDH 838
+ SS C SR S+ ++ + + CC G++ G + + CD N H
Sbjct: 743 QKCSSQRCASRCQPDHSGLSSCVNTKCTDSADRHDCCVGNE-GHHDMQHCDQRSGNTATH 801
Query: 839 DIEAQNI--HNCSGYHNSNFSKNNTWPNCFGRKGNCGEDHVNHS 880
E N H+CSG+ + + N R + G D + S
Sbjct: 802 GTELHNKPNHSCSGHSFPSLCVKDEGANLVDRLCDGGGDGFHES 845
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564834|ref|XP_003550652.1| PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/710 (72%), Positives = 616/710 (86%), Gaps = 1/710 (0%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+KSYFDVLG+CCSSEVPLIENIL+ L+G+KEVSVIVPSRTVIV+HD L+ISQ QIVKALN
Sbjct: 2 RKSYFDVLGLCCSSEVPLIENILRPLQGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALN 61
Query: 70 QARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPII 129
+AR EAN+R YG +QK+WPSPY++A GVLL +S+LK+V+HPL++ ALGAVA+ ++P+I
Sbjct: 62 EARLEANIRVYGDEKHQKRWPSPYSIASGVLLLLSLLKFVFHPLKYLALGAVAVAVYPLI 121
Query: 130 LKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMS 189
LK + +IRN +LDINIL+LIAVIGTI+MN Y+EAG IVFLF+IA+WLESRASHKATAVMS
Sbjct: 122 LKAIVSIRNLRLDINILMLIAVIGTISMNHYLEAGTIVFLFSIAQWLESRASHKATAVMS 181
Query: 190 SLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGES 249
SLM+IAPQKA+IA TGE VDA EVK+NTVL VKAGEVIPIDG+V+DG CEVDEK LTGES
Sbjct: 182 SLMNIAPQKAVIAETGEVVDADEVKINTVLEVKAGEVIPIDGVVIDGICEVDEKKLTGES 241
Query: 250 YPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS 309
+PV+KQK STVWAGTINLNGYISV+TTA+AEDCV+AKMAKLVEEAQNSK+ IQR +DKF+
Sbjct: 242 FPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVMAKMAKLVEEAQNSKTNIQRLIDKFA 301
Query: 310 QYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKA 369
Q+YTP V+ ISA VAVIP+AL NHK W +LVVLVSACPCALILSTPV T+CA TKA
Sbjct: 302 QFYTPGVVIISALVAVIPLALKQHNHKLWLQFSLVVLVSACPCALILSTPVATFCAYTKA 361
Query: 370 ATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIE 429
ATSGLLIKGGD+L+TLAK++ MAFDKTGTIT+GEFV++ FQ LS+DI+ NTL YWVSSIE
Sbjct: 362 ATSGLLIKGGDHLETLAKIKVMAFDKTGTITKGEFVVTHFQSLSDDIDFNTLAYWVSSIE 421
Query: 430 SKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGC 489
SKSSHP +AA+V+YGRSLS+EP+PE V +++ FPGEGI GKI G IYIGN++IA RAG
Sbjct: 422 SKSSHPSAAAIVDYGRSLSVEPEPEKVTEFEIFPGEGICGKIEGRVIYIGNKRIAARAGF 481
Query: 490 GTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDN 549
TVP + G +G T GYI+ GA P+G F LSDACR EA+ QLKSLGI+TAMLTGDN
Sbjct: 482 ETVPILQGEVERGKTTGYIYLGAIPIGFFSLSDACRLRVQEAIGQLKSLGIKTAMLTGDN 541
Query: 550 QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGI 609
QSAAMQ Q++LG++L +VH+ELLPEDK KII++FK+EG TAM+GDG+NDAPALA ADIGI
Sbjct: 542 QSAAMQVQDELGHSLELVHAELLPEDKVKIISEFKKEGPTAMVGDGLNDAPALAAADIGI 601
Query: 610 SMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG 669
SMGISGSALA+ETG +ILMSNDI K+PEAI+LARKA KV+ENI SI TKA I+ LA+G
Sbjct: 602 SMGISGSALASETGNIILMSNDIMKIPEAIKLARKASRKVVENIVFSIMTKAAILDLAIG 661
Query: 670 GHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKH 719
GHPLVWAAV+ADVGTCL+VI NSMLLL + H H GKC + SS+ H HK+
Sbjct: 662 GHPLVWAAVVADVGTCLLVIFNSMLLLRKGHNHGGKCCR-SSTKPHNHKN 710
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357479567|ref|XP_003610069.1| Zn/Cd P(IB)-type ATPase [Medicago truncatula] gi|355511124|gb|AES92266.1| Zn/Cd P(IB)-type ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1060 (56%), Positives = 734/1060 (69%), Gaps = 81/1060 (7%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K QKSYFDV+G+CCSSEVPLIENILK L+GVKEVSVIVPSRTVIV+HD LLISQ QIVK
Sbjct: 8 KKLQKSYFDVVGLCCSSEVPLIENILKPLQGVKEVSVIVPSRTVIVVHDTLLISQLQIVK 67
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQAR EAN+R YG +++KKWPS Y++A G+LL +S LK+VY P ++ AL AV GI+
Sbjct: 68 ALNQARLEANIRIYGNENHKKKWPSIYSVASGLLLLLSFLKFVYTPFKYVALAAVVAGIY 127
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI LK + +IRN ++DINILV+IAV GTIAMNDY+EAG IVFLF+I++WLES ASHK+ A
Sbjct: 128 PIFLKAIVSIRNLRIDINILVIIAVAGTIAMNDYLEAGTIVFLFSISDWLESSASHKSNA 187
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM+SLMSIAPQKA+IA TGE+VD EV++NT+LAVKAGE+IPIDGI+VDG CEVDEKTLT
Sbjct: 188 VMTSLMSIAPQKAVIAETGEDVDVDEVRVNTILAVKAGEIIPIDGIIVDGDCEVDEKTLT 247
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GES+PV+KQK STVWAGTINLNGYISV+TTA+AEDCVVAKM KLVE+AQNSK+ QR +D
Sbjct: 248 GESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMTKLVEDAQNSKTSTQRLID 307
Query: 307 KFSQYYTP--------------AVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPC 352
KF+++YTP AVIFIS VAV+P+ L V N K W H ALVVLVSACPC
Sbjct: 308 KFAKFYTPVNFDGLIVLVVTFSAVIFISTLVAVVPVVLKVHNEKYWLHFALVVLVSACPC 367
Query: 353 ALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPL 412
ALILSTPV T+CA TKAATSGLLIKGG L+TLAK++ MAFDKTGTIT+GEF ++ FQ L
Sbjct: 368 ALILSTPVATFCAYTKAATSGLLIKGGHALETLAKIKVMAFDKTGTITKGEFAVTNFQSL 427
Query: 413 SEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIG 472
S+DI+LNTL+YWVS IESKSSHP++ A+V++GRSLSI P PE V +++NFPGEGI GKI
Sbjct: 428 SDDIDLNTLIYWVSCIESKSSHPLAEAIVDHGRSLSIVPNPEKVTEFENFPGEGICGKID 487
Query: 473 GEEIYIGNRKIAQRAGCGT-VPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEA 531
+YIGN+KIA RAG T VP+++G G TIGYI+SG +PVGIF LSD CR+G EA
Sbjct: 488 ERVLYIGNKKIATRAGSETVVPTLEGEAHGGKTIGYIYSGPTPVGIFSLSDTCRSGVQEA 547
Query: 532 VNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAM 591
+ +LK LGI+TAMLTGD QSAAMQAQEQLG+AL +VH+ELLPE K KII +FK++G TAM
Sbjct: 548 IRKLKLLGIKTAMLTGDCQSAAMQAQEQLGHALELVHAELLPEGKVKIITEFKKDGPTAM 607
Query: 592 IGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIE 651
+GDG+NDAPALA+ADIGISMGISGSALA+ETG +ILMSND+RK+PEAI+LARKA KVIE
Sbjct: 608 LGDGLNDAPALASADIGISMGISGSALASETGDIILMSNDLRKIPEAIKLARKARRKVIE 667
Query: 652 NIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSS 711
NI +S+ TK I+ALA+ GHP+VWAAVLADVGTCL+VILNSMLLL H H GK K SS
Sbjct: 668 NIVLSVITKVAILALAIAGHPIVWAAVLADVGTCLLVILNSMLLLPRGHKHGGKSCK-SS 726
Query: 712 SSSHTHKH------------------------IKKCCNPSGKHCKSSAANQTRKHEGKCC 747
+ H HK+ K+CC+ + K A+Q+ + C
Sbjct: 727 NQHHVHKNGCGDTNDGSSHHHDHRHHQHQHHSHKRCCSEKAQPQK--CASQSCSSKNPSC 784
Query: 748 QSSAEFHTHRHGCKSNHFHPSDNQQLC--CSDSKAQNRCEPEDYSS-HGCDSRSNDSGSR 804
S+ + + K+ H +Q C D ++ E + S H + + D G+
Sbjct: 785 TSNPSLIGNVNPLKNMENHDHCHQGSCDKSRDGVQKHNIENKFCSDFHDLNLNAEDIGAD 844
Query: 805 SPNLCGNNQCCAGSDHGAEEDKLCDHERFNKDDHD---------------IEAQNI--HN 847
+ N GN C G H + K C ++ N D HD E Q + H
Sbjct: 845 AVNSHGN---CQG--HKSHGTKHCHYKNINMDTHDHTSLGSHCHLSPCDKKETQQVTKHC 899
Query: 848 CSGYHNSNFSKNNTWPNCFGRKGNCGEDHVNHSVSEEICLE-VTNH-EHQHSHHCSEKHE 905
S + N + T + +K C D H ++EI ++ +T H E H CS E
Sbjct: 900 HSNHGCENLKDHGTIHDIQHQKSGCHSDFKKHE-TDEISIDIITEHVELASMHGCSNLAE 958
Query: 906 KNHVHVTDSGSHSCGHHCPEPIPVIKKCYTDHSEGRHNAAYHMPLGTDQVESSVAKSACM 965
K D CP+ V C + + + +ESS+ AC+
Sbjct: 959 KEKDSCKD---------CPKLPVVCGGCEGPNEREVSPCCKNEGYSKESIESSIMH-ACI 1008
Query: 966 SLGKRENERCCKSYYMKQCCGDHVHFGTKFGGGLSEIVTE 1005
S KRE CCKS YMK+CCG H H G GLSEIVTE
Sbjct: 1009 SFDKREVGGCCKS-YMKECCGRHGHSGAGSFVGLSEIVTE 1047
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798966|ref|XP_002867367.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313203|gb|EFH43626.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/836 (63%), Positives = 649/836 (77%), Gaps = 20/836 (2%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K KSYFDVLGICC+SEVPLIENILKS++GVKE SVIVPSRTVIV+HD L++SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILKSMDGVKEYSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQAR EANVR G T+++ KWPSP+AM G+LL +S KY+Y P RW A+ AV GI+
Sbjct: 64 ALNQARLEANVRVTGETNFRNKWPSPFAMVSGLLLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI+ K +A++ F++DINILV+I V TI M DY EAG++VFLFTIAEWL+SRAS+KA+A
Sbjct: 124 PILAKAVASLARFRIDINILVIITVGATIGMRDYTEAGVVVFLFTIAEWLQSRASYKASA 183
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM SLMS+APQKA+IA TGEEV E+K+NTV+AVKAGE IPIDG+VVDG CEVDEKTLT
Sbjct: 184 VMQSLMSLAPQKAMIAETGEEVQVDELKINTVIAVKAGETIPIDGVVVDGNCEVDEKTLT 243
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GE++PV K + STVWAGTINLNGYI+V+TTA+AEDCVVAKMAKLVEEAQNSK+ QRF+D
Sbjct: 244 GEAFPVPKLRDSTVWAGTINLNGYITVKTTALAEDCVVAKMAKLVEEAQNSKTETQRFID 303
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K S YYTPA+I IS C A IP AL V N K W HLALVVLVSACPC LILSTPV T+CAL
Sbjct: 304 KCSMYYTPAIILISVCFAAIPFALKVHNLKHWIHLALVVLVSACPCGLILSTPVATFCAL 363
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSGLLIKG DYL+TLAK++ +AFDKTGTITRGEF++ +FQ LSEDI+L++LLYWVS
Sbjct: 364 TKAATSGLLIKGADYLETLAKIKVVAFDKTGTITRGEFIVMDFQSLSEDISLHSLLYWVS 423
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQR 486
S ESKSSHPM+AALV+Y +S+S+EPKPE VEDYQNFPGEGIYGKI G+E+YIGN++IA R
Sbjct: 424 SAESKSSHPMAAALVDYAKSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIGNKRIASR 483
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
+GC +VP VD G TIGY++ G + G+F LSDACR+G A+A+ +LK+LGI+TAMLT
Sbjct: 484 SGCSSVPDVDVDTKGGKTIGYVYVGKTLSGVFNLSDACRSGVAQAMKELKALGIKTAMLT 543
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQF-KQEGKTAMIGDGINDAPALATA 605
GDNQ+AAM AQEQLGNA+++V +ELLPE K++II +F ++EG TAM+GDG+NDAPALATA
Sbjct: 544 GDNQAAAMHAQEQLGNAMDIVRAELLPEGKSEIIKEFMREEGSTAMVGDGLNDAPALATA 603
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIA 665
DIGISMG+SGSA+ATETG +ILMSNDIR++P+AI+LAR+A KV+EN+ SI K I+A
Sbjct: 604 DIGISMGVSGSAIATETGNIILMSNDIRRIPQAIKLARRAKRKVVENVVTSITMKGAILA 663
Query: 666 LALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHK------- 718
LA GHPL+WAAVLADVGTCL+VILNSMLLL + H KC + SSSSS K
Sbjct: 664 LAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDNHKTGNKCYRESSSSSIVEKLEGDAAG 723
Query: 719 HIKKCCNP--SGKHCKSS-AANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDNQQLCC 775
++ P S KHCKS +T+ + +SS++ H+H C+ DN +
Sbjct: 724 DMEAGLLPKISDKHCKSGCCGTKTQVKVMQPAKSSSD-HSHSGCCEKKQ---KDNVTVV- 778
Query: 776 SDSKAQNRCEPEDYSSHGCDSRSNDSGSRSPNLCGNNQCCAGSDHGAEEDKLCDHE 831
K + EP D G DS + S+ PN Q C G + HE
Sbjct: 779 ---KKSSCAEPVDL-VQGHDSGCCGNKSQQPNQHEVQQSCHNKPSGLDIGTGSQHE 830
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449516337|ref|XP_004165203.1| PREDICTED: LOW QUALITY PROTEIN: cadmium/zinc-transporting ATPase HMA2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/759 (69%), Positives = 625/759 (82%), Gaps = 10/759 (1%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+KSYFDVLGICCSSE+P+IENILK +EG+KE+ VIV +RTVIVLHD LL+SQ QIVKALN
Sbjct: 15 KKSYFDVLGICCSSEIPVIENILKDIEGIKEIRVIVATRTVIVLHDDLLVSQAQIVKALN 74
Query: 70 QARFEANVRAYGG-TSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPI 128
QARFEANVRAYG ++KKWPSPYA+A G+LL +S+LKYV RW AL AVA GI PI
Sbjct: 75 QARFEANVRAYGDQKDHRKKWPSPYAVASGLLLLLSLLKYVNPIFRWVALAAVAAGILPI 134
Query: 129 ILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVM 188
+LK AA+R+ ++DINIL LIAVIGTI + DY+EA IVFLFTIAEWLESRA+HKA AVM
Sbjct: 135 VLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVM 194
Query: 189 SSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGE 248
SSL+SIAPQKA++A TGE V A EVKL T+LAVKAGE IPIDGIVV+GKCEVDEKTLTGE
Sbjct: 195 SSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGE 254
Query: 249 SYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF 308
S+PV KQK STVWAGTINLNGY++V+TTA+AEDCVVAKMAKLVEEAQN+KSR QRF+DK
Sbjct: 255 SFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKC 314
Query: 309 SQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTK 368
+++YTPAVI IS C+ VIP+AL + N WFHLALVVLVSACPCALILSTPV ++CALTK
Sbjct: 315 AKFYTPAVIIISTCIVVIPLALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTK 374
Query: 369 AATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-INLNTLLYWVSS 427
AATSGLLIKGGDYL+TL K++ MAFDKTGTITRGEF+++EFQ L +D I+L+TLLYWVSS
Sbjct: 375 AATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFMVTEFQVLDKDNISLDTLLYWVSS 434
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRA 487
IESKSSHPM+AALV++GRSLSI+PKPE+V+D+QNFPGEG++G+I G++IYIGNRKIA RA
Sbjct: 435 IESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRA 494
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
C TVP + G T+GYIF G G+F LSD+CRTGA EA+++L+SLGI+TAMLTG
Sbjct: 495 NCATVPEIKDEAKDGRTVGYIFCGTIAAGVFSLSDSCRTGAKEAMDELRSLGIKTAMLTG 554
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADI 607
D+ +AA+QAQ++LG AL VH+ELLP+DK ++IN FK+EG TAMIGDG+NDAPALATADI
Sbjct: 555 DSSAAALQAQKELGKALQAVHAELLPQDKTRLINDFKKEGPTAMIGDGLNDAPALATADI 614
Query: 608 GISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA 667
GISMGISGSA A ETG VILM+NDIRKVP+AIRLAR+A+ KVIEN+ +S+ + I+ LA
Sbjct: 615 GISMGISGSAXAIETGDVILMTNDIRKVPKAIRLARRANNKVIENVILSVVPRIAILGLA 674
Query: 668 LGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKHIKKCCNPS 727
GGHPLVWAAVLADVG C++VILNSMLLL T H+GK S++ + KH KCC+ S
Sbjct: 675 FGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGHKGKKAGKFSATHGSSKH--KCCHVS 732
Query: 728 GK------HCKSSAANQTRKHEGKCCQSSAEFHTHRHGC 760
H N C + HTH HGC
Sbjct: 733 SHSDECSGHTHDHGCNHRSSGSTGCVKLCEHDHTHDHGC 771
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380039660|gb|AFD32368.1| HMA2 transporter [Sedum alfredii] | Back alignment and taxonomy information |
|---|
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1010 (56%), Positives = 694/1010 (68%), Gaps = 65/1010 (6%)
Query: 5 QERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQI 64
Q+ K+QK+YFDVLG+CCSSEV LIENILK+L+GVK++SVIVPSRTVIV+HD LLIS QI
Sbjct: 16 QKSKFQKTYFDVLGLCCSSEVVLIENILKNLDGVKDISVIVPSRTVIVVHDELLISSLQI 75
Query: 65 VKALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIG 124
VKALNQAR EANVR G +Y+ KWPSPYA+ CGVLL +S+ ++++ PLRW +L AVA+G
Sbjct: 76 VKALNQARLEANVRNRGEANYRNKWPSPYAVFCGVLLVVSLFQFLFPPLRWISLAAVAVG 135
Query: 125 IFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKA 184
IFPI + + A++NF LDINIL + AVIGTI + DY+EA IVFLFTIAEWLESRASHKA
Sbjct: 136 IFPIAWRSVIALKNFTLDINILAIFAVIGTIILRDYLEAATIVFLFTIAEWLESRASHKA 195
Query: 185 TAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKT 244
TAVMSSLM++APQKA+IA TGE VDA +VK+NT+LAVKAGEV+PIDGIVV+G+ EVDEKT
Sbjct: 196 TAVMSSLMNMAPQKAVIAETGEVVDADDVKINTILAVKAGEVVPIDGIVVEGESEVDEKT 255
Query: 245 LTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRF 304
LTGESYPV KQK STV AGT+NLNGYISV+TTA AEDCVVAKMAKLVEEAQNSKSR QRF
Sbjct: 256 LTGESYPVPKQKDSTVLAGTMNLNGYISVKTTATAEDCVVAKMAKLVEEAQNSKSRTQRF 315
Query: 305 VDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYC 364
+DK ++YYTP+V+ I+ VAVIP + V N W+HLALVVLVSACPC LILSTPV T+C
Sbjct: 316 IDKCAKYYTPSVLLIAILVAVIPAVMKVQNIDHWYHLALVVLVSACPCGLILSTPVATFC 375
Query: 365 ALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYW 424
AL+KAATSGLLIKGGDYL+TLAK++ MAFDKTGTITRGEFV+S+FQ L D+ L TLLYW
Sbjct: 376 ALSKAATSGLLIKGGDYLETLAKIKTMAFDKTGTITRGEFVVSDFQSLRADLPLQTLLYW 435
Query: 425 VSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIA 484
VSSIESKSSHPM+ ALV+YGRS S+EPKP++V +Y ++PGEGI+GKI G+ +YIGN+++A
Sbjct: 436 VSSIESKSSHPMATALVDYGRSKSVEPKPDEVGEYHSYPGEGIHGKIQGQHVYIGNKRMA 495
Query: 485 QRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAM 544
RA C + P + M+G TIGYIF+G + G+F LSDACR+GAAEAVN+LK++GIRT M
Sbjct: 496 TRANCASGPIPEAGSMEGKTIGYIFTGTTLAGMFSLSDACRSGAAEAVNELKNMGIRTVM 555
Query: 545 LTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALAT 604
LTGDNQ++A AQ QL NAL +VH+ELLPEDKA+II + K G+ AMIGDGINDAPALAT
Sbjct: 556 LTGDNQASANHAQAQLKNALELVHAELLPEDKARIIQELKSNGRVAMIGDGINDAPALAT 615
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGII 664
ADIGISMGI+GSALATETG VILMSNDIRKVPEAI+LAR+A KV++N+ +S+ TK I+
Sbjct: 616 ADIGISMGIAGSALATETGNVILMSNDIRKVPEAIKLARRAQAKVVQNVILSVVTKGAIL 675
Query: 665 ALALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKHIKKCC 724
ALA+ GHPLVWAAVLADVGTCL+VI NSMLLL RG + + +H K C
Sbjct: 676 ALAIAGHPLVWAAVLADVGTCLLVIFNSMLLL------RGTSHHGHNHNHGHDQHGKGMC 729
Query: 725 NPSGKHCKSSAANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDNQQLCCSDSKAQNRC 784
+ H +S HGC S H + C SK
Sbjct: 730 KKADAHDHAS-----------------------HGCGSGHTKCETKKDEC--GSKCGALV 764
Query: 785 EPEDYSSHGCDSRSNDSGSRSPNLCGNNQCCAGSDHGAEEDKLCDHERFNKDDHDIEAQN 844
+ S C S ++ S +CCA +D +DK +
Sbjct: 765 TEQRQSEKCCGSAASKS---------KTECCADADLIYGKDKKDCCGDVDDCCDSNLEDE 815
Query: 845 IHNCSGYHNSNFSKNNTWPNCFGRKGNCGEDHVNHSVSEEICLEVTNHEHQHSH------ 898
C + C E + +++ ++ +H+H+ S
Sbjct: 816 TKVCKAAKCQGPVTSYKHVQCSSSMA-VEESIIVVDEIQDVKIQAKSHDHKASKCCEAKK 874
Query: 899 -HCSEKHEKNHVHVTDSGSHSCGHHCPEPIPVIKKCYTDHSEGRHNAAYHMPLGTDQVES 957
HCS + H H + + C + P +C HS H P D
Sbjct: 875 PHCSTVDKNPHEHTHTNNTTCCKKKSSQEAP--PQCQPSHSHSHG----HKPSEMD---- 924
Query: 958 SVAKSACMSL--GKRENERCCKSYYMKQCCGDHVHFGTKFGGGLSEIVTE 1005
+ C S+ GK E CCKSY K+CC H + F GLSEIV E
Sbjct: 925 --TRHGCKSVGAGKTEIGGCCKSYK-KECCAHDKH--SHFKKGLSEIVVE 969
|
Source: Sedum alfredii Species: Sedum alfredii Genus: Sedum Family: Crassulaceae Order: Saxifragales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457261|ref|XP_004146367.1| PREDICTED: cadmium/zinc-transporting ATPase HMA2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/753 (69%), Positives = 625/753 (83%), Gaps = 22/753 (2%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+KSYFDVLGICCSSE+P+IENILK +EG+KE+ VIV +RTVIVLHD LL+SQ QIVKALN
Sbjct: 15 KKSYFDVLGICCSSEIPVIENILKDIEGIKEIRVIVATRTVIVLHDDLLVSQAQIVKALN 74
Query: 70 QARFEANVRAYGG-TSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPI 128
QARFEANVRAYG ++KKWPSPYA+A G+LL +S+LKYV RW AL AVA GI PI
Sbjct: 75 QARFEANVRAYGDQKDHRKKWPSPYAVASGLLLLLSLLKYVNPIFRWVALAAVAAGILPI 134
Query: 129 ILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVM 188
+LK AA+R+ ++DINIL LIAVIGTI + DY+EA IVFLFTIAEWLESRA+HKA AVM
Sbjct: 135 VLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVM 194
Query: 189 SSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGE 248
SSL+SIAPQKA++A TGE V A EVKL T+LAVKAGE IPIDGIVV+GKCEVDEKTLTGE
Sbjct: 195 SSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGE 254
Query: 249 SYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF 308
S+PV KQK STVWAGTINLNGY++V+TTA+AEDCVVAKMAKLVEEAQN+KSR QRF+DK
Sbjct: 255 SFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKC 314
Query: 309 SQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTK 368
+++YTPAVI IS C+ VIP+AL + N WFHLALVVLVSACPCALILSTPV ++CALTK
Sbjct: 315 AKFYTPAVIIISTCIVVIPLALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTK 374
Query: 369 AATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-INLNTLLYWVSS 427
AATSGLLIKGGDYL+TL K++ MAFDKTGTITRGEF+++EFQ L +D I+L+TLLYWVSS
Sbjct: 375 AATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFMVTEFQVLDKDNISLDTLLYWVSS 434
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRA 487
IESKSSHPM+AALV++GRSLSI+PKPE+V+D+QNFPGEG++G+I G++IYIGNRKIA RA
Sbjct: 435 IESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRA 494
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
C TVP + G T+GYIF G G+F LSD+CRTGA EA+++L+SLGI+TAMLTG
Sbjct: 495 NCATVPEIKDEAKDGRTVGYIFCGTIAAGVFSLSDSCRTGAKEAMDELRSLGIKTAMLTG 554
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADI 607
D+ +AA+QAQ++LG AL VH+ELLP+DK ++IN FK+EG TAMIGDG+NDAPALATADI
Sbjct: 555 DSSAAALQAQKELGKALQAVHAELLPQDKTRLINDFKKEGPTAMIGDGLNDAPALATADI 614
Query: 608 GISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA 667
GISMGISGSALA ETG VILM+NDIRKVP+AIRLAR+A+ KVIEN+ +S+ + I+ LA
Sbjct: 615 GISMGISGSALAIETGDVILMTNDIRKVPKAIRLARRANNKVIENVILSVVPRIAILGLA 674
Query: 668 LGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHKHIKKCCNPS 727
GGHPLVWAAVLADVG C++VILNSMLLL T H+GK S++ + KH KCC+ S
Sbjct: 675 FGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGHKGKKAGKFSATHGSSKH--KCCHVS 732
Query: 728 GKHCKSSAANQTRKHEGKCCQSSAEFHTHRHGC 760
H +C HTH HGC
Sbjct: 733 S-------------HSDEC-----SGHTHDHGC 747
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15234620|ref|NP_194740.1| Cd2+/Zn2+-exporting ATPase [Arabidopsis thaliana] gi|12229675|sp|Q9SZW4.1|HMA2_ARATH RecName: Full=Cadmium/zinc-transporting ATPase HMA2; AltName: Full=Cadmium/zinc-transporting ATPase 3; AltName: Full=Protein HEAVY METAL ATPASE 2 gi|4938487|emb|CAB43846.1| cadmium-transporting ATPase-like protein [Arabidopsis thaliana] gi|7269911|emb|CAB81004.1| cadmium-transporting ATPase-like protein [Arabidopsis thaliana] gi|332660322|gb|AEE85722.1| Cd2+/Zn2+-exporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/818 (63%), Positives = 640/818 (78%), Gaps = 30/818 (3%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K KSYFDVLGICC+SEVPLIENIL S++GVKE SVIVPSRTVIV+HD L++SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQA+ EANVR G T+++ KWPSP+A+ G+LL +S KY+Y P RW A+ AV GI+
Sbjct: 64 ALNQAQLEANVRVTGETNFKNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI+ K +A++ F++DINILV++ V TI M DY EA ++VFLFTIAEWL+SRAS+KA+A
Sbjct: 124 PILAKAVASLARFRIDINILVVVTVGATIGMQDYTEAAVVVFLFTIAEWLQSRASYKASA 183
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM SLMS+APQKA+IA TGEEV+ E+K NTV+AVKAGE IPIDG+VVDG CEVDEKTLT
Sbjct: 184 VMQSLMSLAPQKAVIAETGEEVEVDELKTNTVIAVKAGETIPIDGVVVDGNCEVDEKTLT 243
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GE++PV K K STVWAGTINLNGYI+V TTA+AEDCVVAKMAKLVEEAQNSK+ QRF+D
Sbjct: 244 GEAFPVPKLKDSTVWAGTINLNGYITVNTTALAEDCVVAKMAKLVEEAQNSKTETQRFID 303
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K S+YYTPA+I IS C IP AL V N K W HLALVVLVSACPC LILSTPV T+CAL
Sbjct: 304 KCSKYYTPAIILISICFVAIPFALKVHNLKHWVHLALVVLVSACPCGLILSTPVATFCAL 363
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSGLLIKG DYL+TLAK++ +AFDKTGTITRGEF++ +FQ LSEDI+L +LLYWVS
Sbjct: 364 TKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQSLLYWVS 423
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQR 486
S ESKSSHPM+AA+V+Y RS+S+EPKPE VEDYQNFPGEGIYGKI G+E+YIGN++IA R
Sbjct: 424 STESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIGNKRIASR 483
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AGC +VP +D G TIGY++ G + G+F LSDACR+G A+A+ +LKSLGI+ AMLT
Sbjct: 484 AGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLGIKIAMLT 543
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK-QEGKTAMIGDGINDAPALATA 605
GDN +AAM AQEQLGNA+++V +ELLPEDK++II Q K +EG TAM+GDG+NDAPALATA
Sbjct: 544 GDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLNDAPALATA 603
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIA 665
DIGISMG+SGSALATETG +ILMSNDIR++P+AI+LA++A KV+EN+ +SI K I+A
Sbjct: 604 DIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISITMKGAILA 663
Query: 666 LALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSS---------HT 716
LA GHPL+WAAVLADVGTCL+VILNSMLLL + H KC + SSSSS
Sbjct: 664 LAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIAEKLEGDA 723
Query: 717 HKHIKKCCNP--SGKHCKSS-AANQTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDN--- 770
++ P S KHCK +T++ K ++S++ H+H C++ DN
Sbjct: 724 AGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSD-HSHSGCCETKQ---KDNVTV 779
Query: 771 -QQLCCSDSKAQNRCEPEDYSSHGCDSRSNDSGSRSPN 807
++ CC+ EP D HG DS S+ P+
Sbjct: 780 VKKSCCA--------EPVDL-GHGHDSGCCGDKSQQPH 808
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550732|ref|XP_003543738.1| PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/713 (72%), Positives = 606/713 (84%), Gaps = 21/713 (2%)
Query: 6 ERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIV 65
E+ QKSYFDVLG+CCSSEVPLIENILK LEG+KEVSVIVPSRTVIV+HD L+ISQ QIV
Sbjct: 5 EKAVQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTLVISQLQIV 64
Query: 66 KALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGI 125
KALNQAR EAN+R YG +QK+WPSPY++A GVLL +S+LK+V+HPL++ ALGAVA+G
Sbjct: 65 KALNQARLEANIRVYGDEKHQKRWPSPYSIASGVLLLLSLLKFVFHPLKYLALGAVAVGA 124
Query: 126 FPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKAT 185
+PIILK + +IRN +LDINIL+LIAVIGTI MNDY+EAG IVFLF+IAEWLESRASHKA
Sbjct: 125 YPIILKAIVSIRNLRLDINILMLIAVIGTIVMNDYLEAGTIVFLFSIAEWLESRASHKAN 184
Query: 186 AVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTL 245
AVMSSLM+I PQKA+IA TGE VDA EVK++TVLAVKAGEVIPIDG+V+DG CEVDEKTL
Sbjct: 185 AVMSSLMNITPQKAVIAETGEVVDADEVKIDTVLAVKAGEVIPIDGVVLDGTCEVDEKTL 244
Query: 246 TGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFV 305
TGES+PV+KQK STVWAGTINLNGYISV+TTA+AEDCVVAKMAKL
Sbjct: 245 TGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKL--------------- 289
Query: 306 DKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCA 365
+YTP V+ ISA VAVIP+AL N K W H ALVVLVSACPCALILSTPV T+CA
Sbjct: 290 -----FYTPGVVIISALVAVIPLALKQHNEKHWLHFALVVLVSACPCALILSTPVATFCA 344
Query: 366 LTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWV 425
+KAATSGLLIKGGD+L+TLAK++ MAFDKTGTIT+GEFV++ FQ LS+DI+LNTL YWV
Sbjct: 345 YSKAATSGLLIKGGDHLETLAKIKVMAFDKTGTITKGEFVVTHFQSLSDDIDLNTLAYWV 404
Query: 426 SSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQ 485
SSIESKSSHP++AA+V+YGRSLS+EP+PE V +++NFPGEGI GKI G IYIGN+KIA
Sbjct: 405 SSIESKSSHPLAAAIVDYGRSLSVEPEPEKVTEFENFPGEGICGKIEGRVIYIGNKKIAT 464
Query: 486 RAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAML 545
RAG TVP + G +G T GYI+ GA+P+G F LSD CR G EA+ QLKSLGI+TAML
Sbjct: 465 RAGSETVPILQGEIERGKTTGYIYLGATPLGFFSLSDTCRLGVQEAIGQLKSLGIKTAML 524
Query: 546 TGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATA 605
TGD+QSAAMQAQEQLG++L +VH+ELLPEDK KII++FK+EG TAMIGDG+NDAPALA A
Sbjct: 525 TGDSQSAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGLNDAPALAAA 584
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIA 665
DIGISMGISGSALA+ETG +ILMSNDIRK+PEAI+LARKA KV+ENI +SI TKA I+
Sbjct: 585 DIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVLENIVLSIMTKAAILG 644
Query: 666 LALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSSSSSSHTHK 718
LA+GGHPLVWAAV+ADVGTCL+VI NSMLLL + H H GKC + SS+ H HK
Sbjct: 645 LAIGGHPLVWAAVVADVGTCLLVIFNSMLLLRKGHNHGGKCCR-SSTKPHNHK 696
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1007 | ||||||
| TAIR|locus:2059083 | 1172 | HMA4 "heavy metal atpase 4" [A | 0.687 | 0.590 | 0.687 | 8.9e-271 | |
| TAIR|locus:2126490 | 951 | HMA2 "heavy metal atpase 2" [A | 0.904 | 0.957 | 0.554 | 9.9e-271 | |
| TAIR|locus:2126500 | 542 | HMA3 "heavy metal atpase 3" [A | 0.533 | 0.990 | 0.629 | 1.3e-180 | |
| UNIPROTKB|Q87UL7 | 752 | cadA-1 "Cadmium-translocating | 0.669 | 0.896 | 0.348 | 1.3e-102 | |
| TIGR_CMR|GSU_2147 | 713 | GSU_2147 "cadmium-translocatin | 0.678 | 0.957 | 0.327 | 1.4e-94 | |
| TIGR_CMR|CHY_0860 | 686 | CHY_0860 "cation-transporting | 0.666 | 0.978 | 0.309 | 8.3e-90 | |
| TIGR_CMR|BA_0595 | 788 | BA_0595 "heavy metal-transport | 0.580 | 0.742 | 0.331 | 4.4e-86 | |
| UNIPROTKB|P37617 | 732 | zntA [Escherichia coli K-12 (t | 0.663 | 0.912 | 0.314 | 1e-84 | |
| UNIPROTKB|Q9KT72 | 768 | VC_1033 "Cation transport ATPa | 0.673 | 0.882 | 0.313 | 3.4e-84 | |
| TIGR_CMR|VC_1033 | 768 | VC_1033 "cation transport ATPa | 0.673 | 0.882 | 0.313 | 3.4e-84 |
| TAIR|locus:2059083 HMA4 "heavy metal atpase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2529 (895.3 bits), Expect = 8.9e-271, Sum P(3) = 8.9e-271
Identities = 476/692 (68%), Positives = 582/692 (84%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K QKSYFDVLGICC+SEVP+IENILKSL+GVKE SVIVPSRTVIV+HD+LLIS QI K
Sbjct: 14 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAK 73
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALN+AR EANVR G TS++ KWPSP+A+ G+LL +S LK+VY PLRW A+ AVA GI+
Sbjct: 74 ALNEARLEANVRVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAVAAGIY 133
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI+ K A+I+ ++DINILV+I VI T+AM D++EA +VFLFTI++WLE+RAS+KAT+
Sbjct: 134 PILAKAFASIKRPRIDINILVIITVIATLAMQDFMEAAAVVFLFTISDWLETRASYKATS 193
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM SLMS+APQKAIIA TGEEV+ EVK++TV+AVKAGE IPIDGIVVDG CEVDEKTLT
Sbjct: 194 VMQSLMSLAPQKAIIAETGEEVEVDEVKVDTVVAVKAGETIPIDGIVVDGNCEVDEKTLT 253
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GE++PV KQ+ STVWAGTINLNGYI V+TT++A DCVVAKMAKLVEEAQ+SK++ QR +D
Sbjct: 254 GEAFPVPKQRDSTVWAGTINLNGYICVKTTSLAGDCVVAKMAKLVEEAQSSKTKSQRLID 313
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K SQYYTPA+I +SACVA++P+ + V N K WFHLALVVLVS CPC LILSTPV T+CAL
Sbjct: 314 KCSQYYTPAIILVSACVAIVPVIMKVHNLKHWFHLALVVLVSGCPCGLILSTPVATFCAL 373
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSGLLIK DYL TL+K++ +AFDKTGTITRGEF++ +F+ LS DINL +LLYWVS
Sbjct: 374 TKAATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIVIDFKSLSRDINLRSLLYWVS 433
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQR 486
S+ESKSSHPM+A +V+Y +S+S+EP+PE+VEDYQNFP N+KIA R
Sbjct: 434 SVESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIFIGNKKIASR 493
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AGC TVP ++ G T+GY++ G G F LSDACR+G ++A+ +LKSLGI+TAMLT
Sbjct: 494 AGCSTVPEIEVDTKGGKTVGYVYVGERLAGFFNLSDACRSGVSQAMAELKSLGIKTAMLT 553
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATAD 606
GDNQ+AAM AQEQLGN L+VVH +LLPEDK++II +FK+EG TAM+GDG+NDAPALATAD
Sbjct: 554 GDNQAAAMHAQEQLGNVLDVVHGDLLPEDKSRIIQEFKKEGPTAMVGDGVNDAPALATAD 613
Query: 607 IGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIAL 666
IGISMGISGSALAT+TG +ILMSNDIR++P+A++LAR+A KV+EN+ +SI KAGI+AL
Sbjct: 614 IGISMGISGSALATQTGNIILMSNDIRRIPQAVKLARRARRKVVENVCLSIILKAGILAL 673
Query: 667 ALGGHPLVWAAVLADVGTCLIVILNSMLLLHE 698
A GHPL+WAAVL DVGTCL+VI NSMLLL E
Sbjct: 674 AFAGHPLIWAAVLVDVGTCLLVIFNSMLLLRE 705
|
|
| TAIR|locus:2126490 HMA2 "heavy metal atpase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2549 (902.4 bits), Expect = 9.9e-271, Sum P(2) = 9.9e-271
Identities = 532/959 (55%), Positives = 664/959 (69%)
Query: 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVK 66
+K KSYFDVLGICC+SEVPLIENIL S++GVKE SVIVPSRTVIV+HD L++SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 67 ALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIF 126
ALNQA+ EANVR G T+++ KWPSP+A+ G+LL +S KY+Y P RW A+ AV GI+
Sbjct: 64 ALNQAQLEANVRVTGETNFKNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
PI+ K +A++ F++DINILV++ V TI M DY EA ++VFLFTIAEWL+SRAS+KA+A
Sbjct: 124 PILAKAVASLARFRIDINILVVVTVGATIGMQDYTEAAVVVFLFTIAEWLQSRASYKASA 183
Query: 187 VMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
VM SLMS+APQKA+IA TGEEV+ E+K NTV+AVKAGE IPIDG+VVDG CEVDEKTLT
Sbjct: 184 VMQSLMSLAPQKAVIAETGEEVEVDELKTNTVIAVKAGETIPIDGVVVDGNCEVDEKTLT 243
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GE++PV K K STVWAGTINLNGYI+V TTA+AEDCVVAKMAKLVEEAQNSK+ QRF+D
Sbjct: 244 GEAFPVPKLKDSTVWAGTINLNGYITVNTTALAEDCVVAKMAKLVEEAQNSKTETQRFID 303
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K S+YYTPA+I IS C IP AL V N K W HLALVVLVSACPC LILSTPV T+CAL
Sbjct: 304 KCSKYYTPAIILISICFVAIPFALKVHNLKHWVHLALVVLVSACPCGLILSTPVATFCAL 363
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
TKAATSGLLIKG DYL+TLAK++ +AFDKTGTITRGEF++ +FQ LSEDI+L +LLYWVS
Sbjct: 364 TKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQSLLYWVS 423
Query: 427 SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQR 486
S ESKSSHPM+AA+V+Y RS+S+EPKPE VEDYQNFP N++IA R
Sbjct: 424 STESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIGNKRIASR 483
Query: 487 AGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546
AGC +VP +D G TIGY++ G + G+F LSDACR+G A+A+ +LKSLGI+ AMLT
Sbjct: 484 AGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLGIKIAMLT 543
Query: 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK-QEGKTAMIGDGINDAPALATA 605
GDN +AAM AQEQLGNA+++V +ELLPEDK++II Q K +EG TAM+GDG+NDAPALATA
Sbjct: 544 GDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLNDAPALATA 603
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIA 665
DIGISMG+SGSALATETG +ILMSNDIR++P+AI+LA++A KV+EN+ +SI K I+A
Sbjct: 604 DIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISITMKGAILA 663
Query: 666 LALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHT-----HRGXXXXXXXXXXXXXXXX 720
LA GHPL+WAAVLADVGTCL+VILNSMLLL + H +R
Sbjct: 664 LAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIAEKLEGDA 723
Query: 721 XXXXN----P--SGKHCKSSAAN-QTRKHEGKCCQSSAEFHTHRHGCKSNHFHPSDN--- 770
P S KHCK +T++ K ++S++ H+H C++ DN
Sbjct: 724 AGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSD-HSHSGCCETKQ---KDNVTV 779
Query: 771 -QQLCCSDSKAQNRCEPEDYSSHGCDSRSNDSGSRSPNL--CGNNQCCAGSDHGAEEDKL 827
++ CC+ EP D HG DS S+ P+ Q C G +
Sbjct: 780 VKKSCCA--------EPVDLG-HGHDSGCCGDKSQQPHQHEVQVQQSCHNKPSGLDSG-C 829
Query: 828 CDHERFNKDDHDIEAQNIHNC-SGYHNSNFSKNNTWPNCFGRKGNCGEDH---VNHSVSE 883
C + H+++ Q+ H+ SG K+ +G+ E+ VN S
Sbjct: 830 CGGKSQQPHQHELQ-QSCHDKPSGLDIGTGPKHEGSSTLVNLEGDAKEELKVLVNGFCSS 888
Query: 884 EICLEVTNHEHQHSHHC-SEKHEKNHVHVTDSGSHSCGHHCPEPIPVIKKCYTDHSEGR 941
L +T+ + + HC S + H GS+ C + E C DH R
Sbjct: 889 PADLAITSLKVKSDSHCKSNCSSRERCH---HGSNCCRSYAKE------SCSHDHHHTR 938
|
|
| TAIR|locus:2126500 HMA3 "heavy metal atpase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1753 (622.1 bits), Expect = 1.3e-180, P = 1.3e-180
Identities = 341/542 (62%), Positives = 419/542 (77%)
Query: 1 MAAAQERK---YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDAL 57
MA +E K Q SYFDV+GICCSSEV ++ N+L+ ++GVKE SVIVPSRTVIV+HD
Sbjct: 1 MAEGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTF 60
Query: 58 LISQHQIVKALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFA 117
LIS QIVKALNQAR EA+VR YG TS + +WPSP+A+ GVLL +S KY Y PL W A
Sbjct: 61 LISPLQIVKALNQARLEASVRPYGETSLKSQWPSPFAIVSGVLLVLSFFKYFYSPLEWLA 120
Query: 118 LGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLE 177
+ AV G+FPI+ K +A++ F+LDIN L LIAVI T+ M D+ EA IVFLF++A+WLE
Sbjct: 121 IVAVVAGVFPILAKAVASVTRFRLDINALTLIAVIATLCMQDFTEAATIVFLFSVADWLE 180
Query: 178 SRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237
S A+HKA+ VMSSLMS+AP+KA+IA TG EVD EV +NTV++VKAGE IPIDG+VVDG
Sbjct: 181 SSAAHKASIVMSSLMSLAPRKAVIADTGLEVDVDEVGINTVVSVKAGESIPIDGVVVDGS 240
Query: 238 CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNS 297
C+VDEKTLTGES+PVSKQ+ STV A TINLNGYI V+TTA+A DCVVAKM KLVEEAQ S
Sbjct: 241 CDVDEKTLTGESFPVSKQRESTVMAATINLNGYIKVKTTALARDCVVAKMTKLVEEAQKS 300
Query: 298 KSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILS 357
+++ QRF+DK S+YYTPAV+ +AC AVIP+ L V + WFHLALVVLVS CPC LILS
Sbjct: 301 QTKTQRFIDKCSRYYTPAVVVSAACFAVIPVLLKVQDLSHWFHLALVVLVSGCPCGLILS 360
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN 417
TPV T+CALTKAATSG LIK GD L+TLAK++ +AFDKTGTIT+ EF++S+F+ LS IN
Sbjct: 361 TPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDFRSLSPSIN 420
Query: 418 LNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXX 477
L+ LLYWVSSIE KSSHPM+AAL++Y RS+S+EPKP+ VE++QNFP
Sbjct: 421 LHKLLYWVSSIECKSSHPMAAALIDYARSVSVEPKPDIVENFQNFPGEGVYGRIDGQDIY 480
Query: 478 XXNRKIAQRAGCGT--VPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL 535
N++IAQRAGC T VP ++ +G TIGYI+ GA G F L D CR G A+A+ +L
Sbjct: 481 IGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYGVAQALKEL 540
Query: 536 KS 537
KS
Sbjct: 541 KS 542
|
|
| UNIPROTKB|Q87UL7 cadA-1 "Cadmium-translocating P-type ATPase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 245/704 (34%), Positives = 382/704 (54%)
Query: 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQA 71
S F + + C +E LI+N L L GV+++ + +R + V HD L S I +A++
Sbjct: 58 SNFRIEAMDCPTEQTLIQNKLGKLAGVQKLEFNLINRLLGVWHD--LPSTDPIREAISSL 115
Query: 72 RFEAN------VRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGI 125
+A V A + K W P A++ L ++ W + I
Sbjct: 116 GMQAEPVEEGVVPAASVPAPAKHW-WPLALSGVTALGAEVVHLASLGPTWVVALLALVSI 174
Query: 126 FPIIL----KGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRAS 181
F L KG A++NF L+IN L+ IAV G I + + EA +++FLFT+AE +E+++
Sbjct: 175 FSCGLTTYKKGWIALKNFNLNINALMSIAVTGAILIGQWPEAAMVMFLFTVAELIEAKSL 234
Query: 182 HKATAVMSSLMSIAPQKAIIA---GTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC 238
+A +S LM + P+ A + G+ +E++A V+L ++ +K GE + +DG VV G
Sbjct: 235 DRARNAISGLMQLTPELATVKQADGSWQEIEAKNVELGAIVRIKPGERVGLDGEVVSGNS 294
Query: 239 EVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSK 298
+D+ ++TGES PV K G V+AGTIN G + TA A + +A++ VE AQ S+
Sbjct: 295 TIDQASITGESLPVEKTIGDKVFAGTINQAGSLEYRVTAAANNSTLARIIHAVEAAQGSR 354
Query: 299 SRIQRFVDKFSQYYTPAVIFISACVAVI-PIALGVSNHKQWFHLALVVLVSACPCALILS 357
+ QRFVD FS+ YTP V ++ VA+I P+ G W + ALV+LV ACPCAL++S
Sbjct: 355 APTQRFVDSFSRIYTPVVFVVALGVALIAPLFFG-GQWFDWIYRALVLLVVACPCALVIS 413
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN 417
TPV L AA G+LIKGG YL+ K+ ++A DKTGT+T G+ V +++ PL +
Sbjct: 414 TPVTIVSGLAAAARKGILIKGGVYLEMGEKLDYLALDKTGTLTHGKPVQTDYVPLDPTVA 473
Query: 418 LNTLLYWVSSIESKSSHPMSAALVEYG-RSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXX 476
+ +S+ +S HP+S A+ + SL++ +V ++
Sbjct: 474 ESAPAI-AASLAGRSDHPVSQAIAKAADNSLTLY----EVTAFEALGGRGVKGEVNGQMY 528
Query: 477 XXXNRKIAQRAG-CGTV--PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVN 533
N ++ + G C +D +M+G T+ + + P+ +F ++D + + EA+
Sbjct: 529 HLGNHRLVEELGLCSPALEARLDALEMQGKTVVLLLDASGPIALFAVADTVKETSREAIA 588
Query: 534 QLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQ-FKQEGKTAMI 592
QL LGI+T MLTGDN A +Q+G ++ LLP DK I + + + M+
Sbjct: 589 QLHELGIKTVMLTGDNPHTAKAIADQVG--IDEAQGNLLPADKLSAIEALYARNHRVGMV 646
Query: 593 GDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIEN 652
GDGINDAPALA A+IG +M +G+ A ET V LM +D+RK+P IRL+R+ + +N
Sbjct: 647 GDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPTFIRLSRQTSAVLKQN 706
Query: 653 IAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
I ++IATK I + G +W AV AD+G L+V+ N + LL
Sbjct: 707 IILAIATKVLFIGITFAGLATMWMAVFADMGVSLLVVFNGLRLL 750
|
|
| TIGR_CMR|GSU_2147 GSU_2147 "cadmium-translocating P-type ATPase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 232/709 (32%), Positives = 380/709 (53%)
Query: 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIV-----LHDALLISQHQIV 65
K+YF V GI C E + +L V ++ S + V L + + + +
Sbjct: 14 KAYFHVKGITCLDCAQKFEKAVNALPRVVSATLNTMSGRLTVEGSVDLEEIRRLGEEENY 73
Query: 66 KALNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISI-LKYVYHPLRWFA---LGAV 121
++R + + + G + W A+ G+ LAI+ L+ P F L A+
Sbjct: 74 VISPESRQDVSADEHIG---KPDWEMRRALISGIALAIAYGLERFGGPAIVFIPVYLTAM 130
Query: 122 AIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRAS 181
+G + K ++ ++++++ A+IG IA+ Y E + FL+ I+E LE+
Sbjct: 131 VLGGWGNFRKAARSLPRGNFNMSVMMSGAIIGAIAIGKYEEGASVAFLYAISEMLEAWTM 190
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCE 239
+A + LM IAP+ A++ E + E+ + V+ ++ E I +DGI+V G+
Sbjct: 191 DRARRSIRQLMDIAPKVALVRRDSRETVIPVEEIVIGDVMIIRPAERIAMDGIIVRGESA 250
Query: 240 VDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299
+++ +TGES PV K G+ V+AGT+N +G + V+ T + +D +A++ +VEEAQ ++
Sbjct: 251 INQAAITGESMPVEKGVGAEVFAGTLNTHGSLEVKVTKLVQDTTIARIIHMVEEAQTRRA 310
Query: 300 RIQRFVDKFSQYYTPAVIFISACVAVIP-IALGVSNHKQWFHLALVVLVSACPCALILST 358
Q FVD+F+ YTP V+ ++ + ++P + LG + W + L +LV ACPCAL++ST
Sbjct: 311 PSQAFVDRFAAIYTPVVLALAVGIVIVPPLFLGHA-WVPWIYRGLALLVVACPCALVVST 369
Query: 359 PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL 418
PV A++ AA G+LIKGG YL+ + +AFDKTGT+T+G+ V+++ PL E
Sbjct: 370 PVAIVSAISNAARHGVLIKGGIYLEEAGTLSAIAFDKTGTLTKGKPVVTDIVPLGETAE- 428
Query: 419 NTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXX 478
LL +++E++S HP++A++V+ + P V D+
Sbjct: 429 GELLQMAANLEARSEHPLAASIVKAAKDRGCTITP--VVDFTAVAGQGAQGTISGKMVYI 486
Query: 479 XNRKIAQRAGCGT---VPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL 535
+ ++ VP + + +G T+ + S VGI ++D R+ +A A++ L
Sbjct: 487 GSPRLFSEKNISIDEIVPQAERLESEGKTVMILGSAERIVGIIAVADEVRSASAGAISSL 546
Query: 536 KSLGIRTA-MLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQF-KQEGKTAMIG 593
K GIR A MLTGDN + A Q+G ++ +ELLP+DK I+ K+ GK AM+G
Sbjct: 547 KRAGIRHAVMLTGDNTATAKNIAAQVG--VDEFRAELLPQDKLTAIDGLLKEYGKVAMVG 604
Query: 594 DGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENI 653
DGINDAPALA + +GI+MG +G+ A ET + LMS+D+ K+P I L+RKA + +NI
Sbjct: 605 DGINDAPALALSTVGIAMGSAGTDTALETADIALMSDDLAKLPFTILLSRKALAIIRQNI 664
Query: 654 AVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHETHTH 702
S+ KA I G +W A+LAD+G L+V LNS+ LL H
Sbjct: 665 TFSLCIKAVAILAVFPGWLTLWLAILADMGASLLVTLNSLRLLRVNDIH 713
|
|
| TIGR_CMR|CHY_0860 CHY_0860 "cation-transporting ATPase, E1-E2 family, selenocysteine-containing" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 216/697 (30%), Positives = 374/697 (53%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+ S F + G S ++E +K L GV + + + + VL D + I+K
Sbjct: 3 KNSIFYLTGCSUQSCAAVLEERVKKLPGVIDAELDFAAGKLKVLGD---VDPEVIIKEAE 59
Query: 70 QARFEANVRAYGGTSYQKKWPSPYAMACGVLLAI--SILKYVYHP--LRWFALGAVAIGI 125
+ +F+A + Q + Y + G+L + + + ++ F L A+ G
Sbjct: 60 KEKFKAYLSRSDVPKAQNFFKENYLLLMGILFLLVGTGINFIGQDKVASLFYLAAILAGG 119
Query: 126 FPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKAT 185
I KGL + K+ ++L+L +IG +A+ + EA + LF I+E++E+ KA
Sbjct: 120 RETIEKGLKNLWQRKITSDLLMLTGLIGAMALGELTEAALAAVLFGISEFVENYNLEKAR 179
Query: 186 AVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEK 243
+ L + P++A++ GEE E++ ++ +K GE IP+DG++ G+ EV +
Sbjct: 180 TALKELFAAVPEEALVLKNGEEQLCKVEEIRPGDLVVIKPGEKIPVDGVLKKGRIEVSQA 239
Query: 244 TLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQR 303
+TGES + K G V+AG+INL+G+ +ET + + V+A+MA+L+EEAQ K Q
Sbjct: 240 AITGESRGILKLPGEEVYAGSINLDGFGIIETQKPSGETVIARMAELIEEAQKEKLPAQT 299
Query: 304 FVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTY 363
+D+F+ YTP V+ ++ VA IP L + W + AL LV +CPCAL+++ P+
Sbjct: 300 LLDRFAAVYTPLVLALAFLVAFIPPLLLGGEFRLWIYRALTFLVVSCPCALLIAVPISVI 359
Query: 364 CALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLY 423
+L AA G+++KG L+ LA + FDKTGT+TRGE ++E +S D +
Sbjct: 360 SSLGAAARRGIVVKGSRNLEQLALCDTIVFDKTGTLTRGEMEVTEVIAVSPD-------F 412
Query: 424 W--VSSIESKSSHPMSAALVEYGRSLSIEPKPE-DVEDYQNFPXXXXXXXXXXXXXXXXN 480
W V S+E +++HP++ A++ +++ E + E +V +++ P +
Sbjct: 413 WPAVYSLEKRATHPLAKAII---KAVPAEYQKEIEVLNFRQIPGLGVLGQVEGSNYFIGS 469
Query: 481 RKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540
K + + ++ + KG T + PV + ++D R A EA+ +K+LG+
Sbjct: 470 PKGIKEIPESFIKTLQEIEEKGQTAILVAKENIPVALLAVADVIRDDAGEAIRNIKALGL 529
Query: 541 RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDA 599
+L+GD++ A++ E+L + + E+LP++K +I + ++ G K M+GDGINDA
Sbjct: 530 TPVLLSGDSKKVALRVSEEL--EIGKWYGEVLPQEKLTVIKELQESGRKVIMVGDGINDA 587
Query: 600 PALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIAT 659
PALA AD GI+MG GS LAT T +++L+S + +P I+LAR++ V +NI ++I
Sbjct: 588 PALAAADAGIAMG-EGSGLATTTAKIVLLSGKLNNIPFLIKLARQSRAIVKQNIILAIGL 646
Query: 660 KAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
K + L G +W A+ AD+G L+V LN + +L
Sbjct: 647 KLLALMAILPGWLNLWLAIGADIGVALLVSLNGLRVL 683
|
|
| TIGR_CMR|BA_0595 BA_0595 "heavy metal-transporting ATPase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 203/612 (33%), Positives = 335/612 (54%)
Query: 98 GVLLAISIL----KYVYHPLRWFALGAVAIGIFPIILKGLAAI-RNFKLDINILVLIAVI 152
G+L AI+ L + + PL F L + IG I+ + + I R D N L+ IA +
Sbjct: 186 GILTAIAALAGLPQMITIPL--FVLAYLLIG-GDIVWRAVRNITRGQVFDENFLMAIATL 242
Query: 153 GTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAI--IAGTGEEVDA 210
G A+ Y EA ++ + + E +S A +++ ++SLM I P A I ++V
Sbjct: 243 GAFAIQQYPEAVAVMLFYQVGELFQSIAVNRSRKSITSLMDIRPDYANVKIGNETKQVSP 302
Query: 211 GEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGY 270
+V++ + VK GE +P+DG VV+G VD LTGES P + G+ V +G +N NG
Sbjct: 303 EDVQIGDYIIVKPGEKVPLDGKVVEGTSMVDTSALTGESVPREVEVGNDVLSGFVNQNGV 362
Query: 271 ISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIP-IA 329
+++E T + V+K+ LV+ A + K+ + F+ KF++YYTP V+ +A +A IP +
Sbjct: 363 LTIEVTKEFGESTVSKILDLVQNASSKKAPTENFITKFARYYTPVVVITAAIMAFIPPLI 422
Query: 330 LGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVR 389
L + W + ALV LV +CPCAL++S P+ + + A+ SG+L+KG +YL+ L V+
Sbjct: 423 LEGATFSDWIYRALVFLVISCPCALVVSIPLGFFGGIGGASKSGVLVKGSNYLEALNDVK 482
Query: 390 FMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSI 449
++ FDKTGT+T+G F +++ +P SE I LL + + E S+HP++ ++ R SI
Sbjct: 483 YIVFDKTGTLTKGVFKVTKMEP-SEGITNEELLEYAAFAEVYSNHPIAQSIRNAYRK-SI 540
Query: 450 EPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSVDGPKMKGNTIGYIF 509
+ K ++DY N K+ ++ + P+ G T+ ++
Sbjct: 541 DEKI--IDDYNEISGHGTVVKVQGKEIFAGNAKLMRKENI----TFKQPETVG-TLVHVA 593
Query: 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIR-TAMLTGDNQSAAMQAQEQLGNALNVVH 568
G +SD + + +A+ +LK LGI+ T MLTGD + ++LG L+ VH
Sbjct: 594 VDGKYAGYIVISDEVKEDSKQAIQKLKELGIKKTVMLTGDAKLVGEAVGKELG--LDEVH 651
Query: 569 SELLPEDKAKIINQFK--QEGK--TAMIGDGINDAPALATADIGISMGISGSALATETGQ 624
+ELLP+ K + I + + GK A +GDGIND P LA AD+GI+MG GS A E
Sbjct: 652 AELLPQQKVEEIEKIDAAKHGKEKVAFVGDGINDTPVLARADVGIAMGGLGSDAAIEAAD 711
Query: 625 VILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGT 684
+++M+++ K+ A+ +A++ V +NI ++ K ++ L G +W AV +DVG
Sbjct: 712 IVIMTDEPSKIATAVNIAKRTRRIVWQNIIFALGVKGLVLLLGAFGIATMWEAVFSDVGV 771
Query: 685 CLIVILNSMLLL 696
L+ +LN+M +L
Sbjct: 772 TLLAVLNAMRVL 783
|
|
| UNIPROTKB|P37617 zntA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 217/689 (31%), Positives = 356/689 (51%)
Query: 16 VLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEA 75
V G+ C++ +EN ++ L GV +V V+ + ++V DA + Q+ AL +A +
Sbjct: 54 VSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV--DADNDIRAQVESALQKAGYSL 111
Query: 76 NVR--AYGGTSYQKKWPSPYAMACGVLLAISI-LKYVYHPLRWFA-LGAVAIGIFPIILK 131
A + + K P V++AIS L+ HP A + +G++PI +
Sbjct: 112 RDEQAAEEPQASRLKENLPLITLI-VMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQ 170
Query: 132 GLAAIRNFK-LDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSS 190
L I++ I L+ +A IG + + EA +++ LF I E LE A+ +A +S+
Sbjct: 171 ALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSA 230
Query: 191 LMSIAPQKA--IIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGE 248
LM++ P+ A + G EEV ++ V+ V AG +P DG ++ DE LTGE
Sbjct: 231 LMALKPETATRLRKGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGE 290
Query: 249 SYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF 308
S PV + G V AG +++ +++E + + ++ KL+EEA+ ++ I+RF+D+F
Sbjct: 291 SIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRF 350
Query: 309 SQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTK 368
S+ YTPA++ ++ V ++P L ++ ++W + L +L+ CPCAL++STP L
Sbjct: 351 SRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAA 410
Query: 369 AATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSI 428
AA G LIKGG L+ L +V +AFDKTGT+T G+ ++ P + I+ + LL +++
Sbjct: 411 AARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPAT-GISESELLTLAAAV 469
Query: 429 ESKSSHPMSAALVEYGRSLSIE-PKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRA 487
E ++HP++ A+V + + P E K A
Sbjct: 470 EQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEAQVNGERVLICAAG--KHPADA 527
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
G + ++ G T+ + +G+ L D R AA A+++L +LG++ +LTG
Sbjct: 528 FTGLINELESA---GQTVVLVVRNDDVLGVIALQDTLRADAATAISELNALGVKGVILTG 584
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADI 607
DN AA +LG + LLPEDK K + + Q AM+GDGINDAPA+ A I
Sbjct: 585 DNPRAAAAIAGELGLEFK---AGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAAAI 641
Query: 608 GISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA 667
GI+MG SG+ +A ET L N +R + + I LAR H + +NI +++ K +
Sbjct: 642 GIAMG-SGTDVALETADAALTHNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTT 700
Query: 668 LGGHPLVWAAVLADVGTCLIVILNSMLLL 696
L G +W AVLAD G ++V N++ LL
Sbjct: 701 LLGMTGLWLAVLADTGATVLVTANALRLL 729
|
|
| UNIPROTKB|Q9KT72 VC_1033 "Cation transport ATPase, E1-E2 family" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 219/698 (31%), Positives = 362/698 (51%)
Query: 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKAL 68
YQ+S++ + G+ C S IE +K L V +V V+ ++ ++V + + I +A+
Sbjct: 73 YQQSWY-IAGMDCPSCAQKIEKAVKQLGDVTQVQVMFATQKLVVGFNQPSTAP-LIEQAV 130
Query: 69 NQARFEANVRAYGG-TSYQKK---WPSPYAMACGV--LLAISILKYVYHPLRWFALGAVA 122
+ F N A T Q K W S A G+ L+AI L RW
Sbjct: 131 RDSGFSLNPAASSAATPSQSKPPLWQSENARIIGIAALMAIGALVNSSEMSRWIYTLTCL 190
Query: 123 IGIFPIILKGLAAIRNFK-LDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRAS 181
+G+FPI+ + ++ I L+ +A IG + + + +EA +++ LF I E LE+ A+
Sbjct: 191 LGLFPILQQAWRLAKSGSPFSIETLMSVAAIGALYLGETLEAAMVLLLFLIGERLEAYAA 250
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEEVD--AGEVKLNTVLAVKAGEVIPIDGIVVDGKCE 239
+A + +LM++ P+ AI GE V A +++ V+ V G +P DG ++
Sbjct: 251 SRARTGVQALMALVPETAIRIEHGERVTVPAAQLQPGDVIEVAPGGRLPADGRLL-AAAS 309
Query: 240 VDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299
+D LTGES PV G V AG + ++ + +E T+ + + ++ ++EEA++ K+
Sbjct: 310 LDNSALTGESLPVELTAGERVSAGCVIVDKVVQIEITSKQGENAIDRILHMIEEAESRKA 369
Query: 300 RIQRFVDKFSQYYTPAVIFISACVAVIP-IALGVSNHKQWFHLALVVLVSACPCALILST 358
++RF+DKFS++YTP ++ ++ V V+P +A G ++ + W + L +L+ ACPCAL++ST
Sbjct: 370 PLERFLDKFSRWYTPLMMLVALAVIVVPPLAFG-ADWQTWIYRGLALLLIACPCALVIST 428
Query: 359 PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL 418
P L AA G LIKGG L+ L K+ +AFDKTGT+T G+ +++ PL + +
Sbjct: 429 PAAITSGLAAAARRGALIKGGAALEQLGKIETIAFDKTGTLTEGKPQVTDLIPL-QGWDS 487
Query: 419 NTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXX 478
TLL ++IE S HP++ +LV ++ + P+ E
Sbjct: 488 ATLLARAAAIEMGSHHPLATSLVAKAQAEQLTI-PQAQERTALVGRGISGQIDGVQYRLL 546
Query: 479 XNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSL 538
++ + V+ + + T+ + + + VG+ D R+ A +AV L L
Sbjct: 547 APNRVETKLPDVVKQHVEMLEAESKTVVVMLASDAVVGVIAWQDTLRSDARQAVAALHQL 606
Query: 539 GIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGIND 598
GI MLTGDN+ +A +QL + LLP+DK I Q Q + AM+GDGIND
Sbjct: 607 GINALMLTGDNERSAAAMSQQLNMDFR---AGLLPQDKVGYIQQLAQHQRVAMVGDGIND 663
Query: 599 APALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658
APA+ A IGI+MG G+ +A ET L N + ++P I L+R + +N+ +++
Sbjct: 664 APAMKEASIGIAMG-GGTDVALETADAALTHNRLIELPGMIELSRATLAIIRQNVVLALG 722
Query: 659 TKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
KA + +L G +W AVLAD G +V LN++ LL
Sbjct: 723 LKAVFLVTSLLGITGLWMAVLADSGATALVTLNALRLL 760
|
|
| TIGR_CMR|VC_1033 VC_1033 "cation transport ATPase, E1-E2 family" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 219/698 (31%), Positives = 362/698 (51%)
Query: 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKAL 68
YQ+S++ + G+ C S IE +K L V +V V+ ++ ++V + + I +A+
Sbjct: 73 YQQSWY-IAGMDCPSCAQKIEKAVKQLGDVTQVQVMFATQKLVVGFNQPSTAP-LIEQAV 130
Query: 69 NQARFEANVRAYGG-TSYQKK---WPSPYAMACGV--LLAISILKYVYHPLRWFALGAVA 122
+ F N A T Q K W S A G+ L+AI L RW
Sbjct: 131 RDSGFSLNPAASSAATPSQSKPPLWQSENARIIGIAALMAIGALVNSSEMSRWIYTLTCL 190
Query: 123 IGIFPIILKGLAAIRNFK-LDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRAS 181
+G+FPI+ + ++ I L+ +A IG + + + +EA +++ LF I E LE+ A+
Sbjct: 191 LGLFPILQQAWRLAKSGSPFSIETLMSVAAIGALYLGETLEAAMVLLLFLIGERLEAYAA 250
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEEVD--AGEVKLNTVLAVKAGEVIPIDGIVVDGKCE 239
+A + +LM++ P+ AI GE V A +++ V+ V G +P DG ++
Sbjct: 251 SRARTGVQALMALVPETAIRIEHGERVTVPAAQLQPGDVIEVAPGGRLPADGRLL-AAAS 309
Query: 240 VDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299
+D LTGES PV G V AG + ++ + +E T+ + + ++ ++EEA++ K+
Sbjct: 310 LDNSALTGESLPVELTAGERVSAGCVIVDKVVQIEITSKQGENAIDRILHMIEEAESRKA 369
Query: 300 RIQRFVDKFSQYYTPAVIFISACVAVIP-IALGVSNHKQWFHLALVVLVSACPCALILST 358
++RF+DKFS++YTP ++ ++ V V+P +A G ++ + W + L +L+ ACPCAL++ST
Sbjct: 370 PLERFLDKFSRWYTPLMMLVALAVIVVPPLAFG-ADWQTWIYRGLALLLIACPCALVIST 428
Query: 359 PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL 418
P L AA G LIKGG L+ L K+ +AFDKTGT+T G+ +++ PL + +
Sbjct: 429 PAAITSGLAAAARRGALIKGGAALEQLGKIETIAFDKTGTLTEGKPQVTDLIPL-QGWDS 487
Query: 419 NTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXX 478
TLL ++IE S HP++ +LV ++ + P+ E
Sbjct: 488 ATLLARAAAIEMGSHHPLATSLVAKAQAEQLTI-PQAQERTALVGRGISGQIDGVQYRLL 546
Query: 479 XNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSL 538
++ + V+ + + T+ + + + VG+ D R+ A +AV L L
Sbjct: 547 APNRVETKLPDVVKQHVEMLEAESKTVVVMLASDAVVGVIAWQDTLRSDARQAVAALHQL 606
Query: 539 GIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGIND 598
GI MLTGDN+ +A +QL + LLP+DK I Q Q + AM+GDGIND
Sbjct: 607 GINALMLTGDNERSAAAMSQQLNMDFR---AGLLPQDKVGYIQQLAQHQRVAMVGDGIND 663
Query: 599 APALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658
APA+ A IGI+MG G+ +A ET L N + ++P I L+R + +N+ +++
Sbjct: 664 APAMKEASIGIAMG-GGTDVALETADAALTHNRLIELPGMIELSRATLAIIRQNVVLALG 722
Query: 659 TKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
KA + +L G +W AVLAD G +V LN++ LL
Sbjct: 723 LKAVFLVTSLLGITGLWMAVLADSGATALVTLNALRLL 760
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|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SZW4 | HMA2_ARATH | 3, ., 6, ., 3, ., 5 | 0.6381 | 0.7825 | 0.8286 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| Al_scaffold_0007_1097 | annotation not avaliable (944 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1007 | |||
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.0 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 0.0 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-140 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-123 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-83 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-78 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-60 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 2e-53 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-47 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-46 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-46 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-41 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-38 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-27 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 8e-19 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 7e-18 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-16 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-15 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-12 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-11 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-10 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 5e-08 | |
| COG2608 | 71 | COG2608, CopZ, Copper chaperone [Inorganic ion tra | 2e-07 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 3e-07 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 6e-06 | |
| TIGR01491 | 201 | TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfa | 9e-06 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-05 | |
| pfam00403 | 62 | pfam00403, HMA, Heavy-metal-associated domain | 1e-05 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-05 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-05 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 4e-05 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 0.002 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.002 | |
| TIGR00003 | 66 | TIGR00003, TIGR00003, copper ion binding protein | 0.003 | |
| cd00371 | 63 | cd00371, HMA, Heavy-metal-associated domain (HMA) | 0.003 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 639 bits (1651), Expect = 0.0
Identities = 229/558 (41%), Positives = 351/558 (62%), Gaps = 27/558 (4%)
Query: 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAII- 201
+++L+ +A +G +A+ +Y+E +++ LF+I E LE AS +A + +LM +AP A +
Sbjct: 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL 60
Query: 202 -AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTV 260
G+ EEV E+K+ V+ VK GE +P+DG+V+ G VDE LTGES PV K G V
Sbjct: 61 RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEV 120
Query: 261 WAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFIS 320
+AG INL+G +++ T + D +AK+ LVEEAQ+ K++ QRF+D+F++YYTP V+ I+
Sbjct: 121 FAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIA 180
Query: 321 ACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGD 380
+ ++P L W + ALV+LV A PCAL++S P A++ AA G+LIKGG
Sbjct: 181 LAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGA 238
Query: 381 YLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAAL 440
L+ LAK++ +AFDKTGT+T G + + P +L ++ E SSHP++ A+
Sbjct: 239 ALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAE-------VLRLAAAAEQASSHPLARAI 291
Query: 441 VEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKM 500
V+Y R K E+VE + PGEG+ + G E+ IGN + + A P+
Sbjct: 292 VDYAR------KRENVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVG------ARPES 339
Query: 501 KGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI-RTAMLTGDNQSAAMQAQEQ 559
G TI ++ + +G LSD R AAEA+ +LK+LGI + MLTGD ++ A + +
Sbjct: 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE 399
Query: 560 LGNALNVVHSELLPEDKAKIINQFKQE-GKTAMIGDGINDAPALATADIGISMGISGSAL 618
LG ++ VH+ELLPEDK +I+ + +++ G AM+GDGINDAPALA AD+GI+MG SGS +
Sbjct: 400 LG--IDEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457
Query: 619 ATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAV 678
A ET V+L+++D+ ++P+AIRLAR+ V +N+ +++ +I LAL G +W AV
Sbjct: 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAV 517
Query: 679 LADVGTCLIVILNSMLLL 696
L G+ ++VILN++ LL
Sbjct: 518 LGHEGSTVLVILNALRLL 535
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 636 bits (1644), Expect = 0.0
Identities = 254/713 (35%), Positives = 393/713 (55%), Gaps = 40/713 (5%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQ-IVKALNQAR 72
V G+ C++ IE L L GV+E V + + V++D + IV A+ +A
Sbjct: 6 LSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAG 64
Query: 73 FEANVRAYG-----GTSYQKKWPSPYAMACGVLLAISILKYVYHPL---------RWFAL 118
+ A + A + + + G+L +L + L A
Sbjct: 65 YSARLTAALADPAEAEARLLRELLRRLIIAGLLTLPLLLLSLGLLLGAFLLPWVSFLLAT 124
Query: 119 GAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYI--------EAGIIVFLF 170
+ G +P A+R +L+++ LV +A IG A + Y EA +++FLF
Sbjct: 125 PVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFPVYFEEAAMLIFLF 184
Query: 171 TIAEWLESRASHKATAVMSSLMSIAPQKAII---AGTGEEVDAGEVKLNTVLAVKAGEVI 227
+ +LE+RA +A + +L+ +AP+ A + G EEV EV++ ++ V+ GE I
Sbjct: 185 LLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERI 244
Query: 228 PIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKM 287
P+DG+VV G VDE LTGES PV K+ G V+AGT+NL+G +++ T V D +A++
Sbjct: 245 PVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARI 304
Query: 288 AKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLV 347
+LVEEAQ+SK+ IQR D+ + Y+ P V+ I+A + G + + + AL VLV
Sbjct: 305 IRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLV 364
Query: 348 SACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407
ACPCAL L+TP + +AA G+LIKGG+ L+ LAKV + FDKTGT+T G+ ++
Sbjct: 365 IACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVT 424
Query: 408 EFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGI 467
+ L D + LL +++E S HP++ A+V+ E DVED++ PG G+
Sbjct: 425 DVVALDGDEDE--LLALAAALEQHSEHPLAKAIVKAAA----ERGLPDVEDFEEIPGRGV 478
Query: 468 YGKIGGEEIYIGNRKIAQRAG-CGTVPSVDGPKMK--GNTIGYIFSGASPVGIFCLSDAC 524
++ GE + +GN ++ G + S ++ G T+ ++ VG+ L+D
Sbjct: 479 EAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADEL 538
Query: 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK 584
R A EA+ LK+LGI+ MLTGDN+ A ++LG ++ V +ELLPEDKA+I+ + +
Sbjct: 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG--IDEVRAELLPEDKAEIVRELQ 596
Query: 585 QEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLAR 643
EG K AM+GDGINDAPALA AD+GI+MG SG+ +A E V+LM +D+ VPEAI L+R
Sbjct: 597 AEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSR 655
Query: 644 KAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
+ +N+ + A I LA GG W A LA G+ ++V+LN++ LL
Sbjct: 656 ATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSSVLVVLNALRLL 708
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 616 bits (1592), Expect = 0.0
Identities = 230/564 (40%), Positives = 353/564 (62%), Gaps = 19/564 (3%)
Query: 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIA 202
+++L+ +A I AM +E +++FLF + E LE RA +A+ +S+L+++AP A +
Sbjct: 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL 60
Query: 203 ---GTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGST 259
G+ EEV E+++ ++ V+ GE IP+DG+V+ G+ EVDE LTGES PV K++G
Sbjct: 61 QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDE 120
Query: 260 VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFI 319
V+AGTIN +G +++ T + ED +A++ +LVEEAQ+SK+ IQR D+ + YY PAV+ I
Sbjct: 121 VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAI 180
Query: 320 SACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGG 379
+ V+ +ALG + AL VLV ACPCAL L+TPV A+ AA G+LIKGG
Sbjct: 181 ALLTFVVWLALG---ALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGG 237
Query: 380 DYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSE-DINLNTLLYWVSSIESKSSHPMSA 438
D L+ LAKV+ + FDKTGT+T G+ + + +PL + I+ LL +++E SSHP++
Sbjct: 238 DALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDASISEEELLALAAALEQSSSHPLAR 297
Query: 439 ALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKI-GGEEIYIGNRK---IAQRAGCGTVPS 494
A+V Y + +E ED + PG+G+ + GGEE+ IGN + +A +
Sbjct: 298 AIVRYAKKRGLELPK--QEDVEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDL 355
Query: 495 VDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLK-SLGIRTAMLTGDNQSAA 553
++ + +G T+ ++ +G+ L D R A EA+ LK + GI+ MLTGDN+SAA
Sbjct: 356 LNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA 415
Query: 554 MQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMG 612
+LG ++ VH+ELLPEDK I+ + ++EG AM+GDGINDAPALA AD+GI+MG
Sbjct: 416 EAVAAELG--IDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG 473
Query: 613 ISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGH- 671
+GS +A E ++L+++D+ +P AI L+RK + +N+A ++ I LA GG
Sbjct: 474 -AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLL 532
Query: 672 PLVWAAVLADVGTCLIVILNSMLL 695
PL AVL G+ ++V+LNS+ L
Sbjct: 533 PLWLLAVLLHEGSTVLVVLNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-140
Identities = 195/537 (36%), Positives = 292/537 (54%), Gaps = 35/537 (6%)
Query: 159 DYIEAGI-IVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIA---GTGEEVDAGEVK 214
+ +A ++ + WLE A +A+ +S L + P A + G EEV ++
Sbjct: 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQ 111
Query: 215 LNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVE 274
++ V GE IP+DG V++G+ EVDE +TGES PV K+ G V AGT+N G + V
Sbjct: 112 PGDIVRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVR 171
Query: 275 TTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSN 334
TA ED +A++ +LV +AQ SK+ IQR DK + Y+ P VI I+ VI + LG
Sbjct: 172 ATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILG--- 228
Query: 335 HKQWFHLALV----VLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRF 390
F AL VL+ ACPCAL L+TP V A AA +G+LIK GD L+ A +
Sbjct: 229 --ADFVFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDT 286
Query: 391 MAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIE 450
+ FDKTGT+T+G+ +++ E + LL +++E+ S HP++ A+V Y ++ I
Sbjct: 287 VVFDKTGTLTQGKPTVTDVHVFGESDR-DELLALAAALEAGSEHPLAKAIVSYAKAKGI- 344
Query: 451 PKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFS 510
V D++ PG G+ G + G I +GN K+ G T V+ G T + +
Sbjct: 345 -TLSQVSDFKAIPGIGVEGTVEGHTIQLGNEKLLGENGLKTDGEVE---EGGGTTSVLVA 400
Query: 511 -GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS 569
G+ L+D + A E + LK GI MLTGDN+ A ++LG + V +
Sbjct: 401 VNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG--IENVRA 458
Query: 570 ELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
E+LP+DKA +I + +++G AM+GDGINDAPALA AD+GI++G +G+ +A E V+L+
Sbjct: 459 EVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLL 517
Query: 629 SNDIRKVPEAIRLARKAHWKVIEN---------IAVSIATKAGIIALALGGHPLVWA 676
ND+ V AI L+RK ++ +N IA+ IA AG++ A A
Sbjct: 518 RNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIA--AGVLYPAGILLSPAVA 572
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 392 bits (1009), Expect = e-123
Identities = 230/700 (32%), Positives = 369/700 (52%), Gaps = 40/700 (5%)
Query: 16 VLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE- 74
V G+ C S +EN ++ L GV +V V+ + ++V DA + Q+ A+ +A F
Sbjct: 59 VSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVV--DADNDIRAQVESAVQKAGFSL 116
Query: 75 ANVRAYGGTSYQKKWPSPYAM-ACGVLLAIS-ILKYVYHPL-RWFALGAVAIGIFPIILK 131
+ +A + + V++AIS L+ HP + + +G++PI K
Sbjct: 117 RDEQAAAAAPESRLKSENLPLITLAVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARK 176
Query: 132 GLAAIRN---FKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVM 188
L IR+ F I L+ +A IG + + EA +++ LF I E LE A+ +A +
Sbjct: 177 ALRLIRSGSPFA--IETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGYAASRARRGV 234
Query: 189 SSLMSIAPQKA--IIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLT 246
S+LM++ P+ A + G EEV +++ V+ V AG +P DG ++ DE LT
Sbjct: 235 SALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALT 294
Query: 247 GESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306
GES PV + G V AG +++ +++E + + ++ L+EEA+ ++ I+RF+D
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
+FS+ YTPA++ ++ V ++P L + ++W + L +L+ CPCAL++STP L
Sbjct: 355 RFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGL 414
Query: 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS 426
AA G LIKGG L+ L +V +AFDKTGT+T G+ +++ P + I+ + LL +
Sbjct: 415 AAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG-ISESELLALAA 473
Query: 427 SIESKSSHPMSAALVEYG--RSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIA 484
++E S+HP++ A+V R L+I PE E + G GI G++ GE + I
Sbjct: 474 AVEQGSTHPLAQAIVREAQVRGLAI---PE-AESQRALAGSGIEGQVNGERVLI------ 523
Query: 485 QRAGCGTVPSVDGPKMK--------GNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLK 536
G +P + G T+ + +G+ L D R A +A+++LK
Sbjct: 524 --CAPGKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELK 581
Query: 537 SLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGI 596
+LGI+ MLTGDN AA +LG + LLPEDK K + + Q AM+GDGI
Sbjct: 582 ALGIKGVMLTGDNPRAAAAIAGELGIDF---RAGLLPEDKVKAVTELNQHAPLAMVGDGI 638
Query: 597 NDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVS 656
NDAPA+ A IGI+MG SG+ +A ET L N +R + + I L+R H + +NI ++
Sbjct: 639 NDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIA 697
Query: 657 IATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696
+ KA + L G +W AVLAD G +V N++ LL
Sbjct: 698 LGLKAIFLVTTLLGITGLWLAVLADSGATALVTANALRLL 737
|
Length = 741 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 2e-83
Identities = 133/543 (24%), Positives = 233/543 (42%), Gaps = 45/543 (8%)
Query: 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKA-IIAGTGEEVDAGEVKLNTVLAVKA 223
+V +F + + + +S + + A ++ +E+ A ++ V+ VK+
Sbjct: 4 FLVLVFVLLVVKQKLKAEDILRSLSD-RLVNTRPATVLRNGWKEIPAKDLVPGDVVLVKS 62
Query: 224 GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQ----------KGSTVWAGTINLNGYISV 273
GE +P DG+++ G C VDE LTGES PV K G V+AGT G + V
Sbjct: 63 GETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGTLIV 122
Query: 274 ETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS-QYYTPAVIFISACVAVIPIALGV 332
T V ++A +V+ +++ +Q D+ + ++ ++ V + G
Sbjct: 123 VVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGW 182
Query: 333 SNHKQWFHL--ALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRF 390
+ + L AL+VLV P AL + V + A G+L++ + L+ L KV +
Sbjct: 183 DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDY 242
Query: 391 MAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIE 450
+ DKTGT+T+ + + + N+ S PM AL++ +
Sbjct: 243 LCSDKTGTLTKNKMTLQGVYIDGGKED-NSSSLVACDNNYLSGDPMEKALLKSAELVGKA 301
Query: 451 PKP-EDVEDYQNFPGEGIYGKIG---------GEEIYIGN-RKIAQRAGCGTVPSVDGP- 498
K ++ + FP + ++ G I +R C
Sbjct: 302 DKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILER--CNNYEEKYLEL 359
Query: 499 KMKGNT-----IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA 553
+G + +G+ D R A E + +LK+ GI+ M+TGDN A
Sbjct: 360 ARQGLRVLAFASKELEDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTA 419
Query: 554 MQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMG 612
++LG V + + PE K +I+ +++G AM GDG+NDAPAL AD+GI+MG
Sbjct: 420 KAIAKELG---IDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG 476
Query: 613 ISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHP 672
A ++L+ +D+ + +A++ RK + NI +IA +I LAL
Sbjct: 477 ------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV 530
Query: 673 LVW 675
++
Sbjct: 531 IIL 533
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (698), Expect = 4e-78
Identities = 181/676 (26%), Positives = 334/676 (49%), Gaps = 64/676 (9%)
Query: 18 GICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF---- 73
G+ C+S V ++N L+S+ GV + V + RT +V+ A S +V+A+ +A +
Sbjct: 107 GMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSA---SPQDLVQAVEKAGYGAEA 163
Query: 74 ---EANVRAYGGTSYQK-----KWPSPYAMACGVLLAI-------SILKYVYHPLRWFAL 118
+A R + Q +W + A+A G+ + + ++ L W +
Sbjct: 164 IEDDAKRRERQQETAQATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL-WLVI 222
Query: 119 GAVAIGIFPIILKG-------LAAIRNFKLDINILVLI----AVIGTIAMND-------- 159
G + + + ++ G ++ N ++ LV + A + ++++N
Sbjct: 223 GLITLAV--MVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPME 280
Query: 160 ----YIEA-GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKA-IIAGTGE-EVDAGE 212
Y EA +I+ L + LE+RA +++ + L+ + P A ++ GE V +
Sbjct: 281 ARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLAD 340
Query: 213 VKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYIS 272
V+ +L + G+ +P+DG + G+ +DE LTGE P K +G +V AGT+ +G +
Sbjct: 341 VQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVL 400
Query: 273 VETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGV 332
+AV ++++ ++V +AQ+SK I + DK S + P V+ I+ A I G
Sbjct: 401 FRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP 460
Query: 333 SNHKQW-FHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFM 391
+ + +A VL+ ACPCAL L+TP+ + +AA G+L++ D LQ + + +
Sbjct: 461 APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTL 520
Query: 392 AFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEP 451
FDKTGT+T G+ + + ++ L +++E SSHP++ A+++ +++
Sbjct: 521 VFDKTGTLTEGKPQVVAVK-TFNGVDEAQALRLAAALEQGSSHPLARAILDKAGDMTL-- 577
Query: 452 KPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYI 508
V ++ G G+ G+ G + +GN+ + T + +G T +
Sbjct: 578 --PQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLL 635
Query: 509 FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH 568
+ + D R+ + A+ +L G R MLTGDN + A ++ G ++ V
Sbjct: 636 AVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG--IDEVI 693
Query: 569 SELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVIL 627
+ +LP+ KA+ I + + +G + AM+GDGINDAPALA AD+GI+MG GS +A ET + L
Sbjct: 694 AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITL 752
Query: 628 MSNDIRKVPEAIRLAR 643
M + + V +A+ ++R
Sbjct: 753 MRHSLMGVADALAISR 768
|
Length = 834 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 5e-60
Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 4/223 (1%)
Query: 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAII---AGTGEEVDAGEVKLNTVLAV 221
II+ L I LE+ ++A + +L + P A G EE+ A E+ + ++ +
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 222 KAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAED 281
K G+ +P DG +++G EVDE LTGES PV K +G TV+AGT+ L+G + V TA ED
Sbjct: 61 KPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 282 CVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHL 341
+ K+A+LVEEA+++K+ +QR +DK ++ P V+ ++ V +I G + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGG-DFLEALLR 179
Query: 342 ALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384
AL VLV+ACP AL L+ P+ + A G+L+K L+T
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 2e-53
Identities = 137/684 (20%), Positives = 259/684 (37%), Gaps = 134/684 (19%)
Query: 127 PIILKGLAAIRNFKLDINIL--VLIAVIGTI--AMNDYIEAGIIVFLFTIAE-WLESRAS 181
++ K L ++ + + ++ +L A +G A D I ++V + + E RA
Sbjct: 69 SLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRA- 127
Query: 182 HKATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC- 238
+ +L ++ KA + G E+ A E+ ++ ++AG+V+P D +++
Sbjct: 128 ---EKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184
Query: 239 EVDEKTLTGESYPVSKQ--------------KGSTVWAGTINLNGYISVETTAVAEDCVV 284
EVDE LTGES PV KQ + + +++GT ++G A +
Sbjct: 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEF 244
Query: 285 AKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV 344
K+A+L+ + K+ +QR ++K ++ + + A V V+ + G + + F AL
Sbjct: 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALA 304
Query: 345 VLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEF 404
+ V+A P L + + A +++ + ++TL V + DKTGT+T+ +
Sbjct: 305 LAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKM 364
Query: 405 VMSEFQPLSEDINLNTLLYWVSSI--------------------ESKSSHPMSAALVE-- 442
+ + +++ S ++ P ALVE
Sbjct: 365 TVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFA 424
Query: 443 --YGRSLSIEPKPEDVEDYQNFP------------------------------------- 463
G SL + + P
Sbjct: 425 EKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI 484
Query: 464 -GEGIYGKIGGEEIYIGNRKIAQRA----GCGTVPSVDGPKMKGNTIGYIFSGASPVGIF 518
+ G + +++A K + + I S +G+
Sbjct: 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD--DEVDEIESDLVFLGLT 542
Query: 519 CLSDACRTGAAEAVNQLKSLGIRTAMLTGDN--------QSAAMQAQEQLGNAL------ 564
+ D R EA+ +L+ GI+ M+TGD+ + ++A+ + +
Sbjct: 543 GIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELD 602
Query: 565 NVVHSELL-------------PEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGIS 610
+ EL PE KA+I+ ++ G AM GDG+NDAPAL AD+GI+
Sbjct: 603 ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIA 662
Query: 611 MGISGSALATETGQVILMSNDIRKVPEAIRLARK------------AHWKVIENIAVSIA 658
MG G+ A E ++L+ ++ + A+ R+ V E + + I
Sbjct: 663 MGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY 722
Query: 659 TKAGIIALALGGHPLVWAAVLADV 682
+ + L L L+W +L D
Sbjct: 723 SLFNLFFLPLTPLQLLWINLLTDS 746
|
Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 2e-47
Identities = 161/574 (28%), Positives = 250/574 (43%), Gaps = 107/574 (18%)
Query: 120 AVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESR 179
+ IFP + G R F L I I++ V LF A + E+
Sbjct: 45 TTFLTIFPDLFGGTGGSRLFNLAITIILWFTV-----------------LF--ANFAEAV 85
Query: 180 ASHKATAVMSSLMSIAPQKAIIA------GTGEEVDAGEVKLNTVLAVKAGEVIPIDGIV 233
A + A SL + IA G+ E V A E+K ++ V+AGE+IP DG V
Sbjct: 86 AEGRGKAQADSLRKT--KTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEV 143
Query: 234 VDGKCEVDEKTLTGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKL 290
++G VDE +TGES PV ++ G S+V GT L+ ++ + TA + + +M L
Sbjct: 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIAL 203
Query: 291 VEEAQNSKSRIQRFVDKFSQYYTP------------AVIFISACVAVIPIA--LGVSNHK 336
VE A+ K TP +IF+ A + P A G
Sbjct: 204 VEGAERQK--------------TPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGA-- 247
Query: 337 QWFHLALVVLVSACPCALILST-----PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFM 391
++ VLV A LI +T + + + ++ G ++ V +
Sbjct: 248 ----ASVTVLV-ALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTL 302
Query: 392 AFDKTGTITRGEFVMSEFQPLSEDINLNTL--LYWVSSI-----ESKSSHPMSAALVEYG 444
DKTGTIT G SEF P+ ++ L ++S+ E +S +VE
Sbjct: 303 LLDKTGTITLGNRQASEFIPV-PGVSEEELADAAQLASLADETPEGRS-------IVELA 354
Query: 445 RSLSIEPKPEDVEDYQN---FPGEGIYGKI---GGEEIYIGN----RKIAQRAGCGTVPS 494
+ L IE + +D++ + F + + GG EI G R+ + G G +P
Sbjct: 355 KKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERG-GHIPE 413
Query: 495 -----VDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDN 549
VD G T + +G+ L D + G E +L+ +GI+T M+TGDN
Sbjct: 414 DLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDN 473
Query: 550 Q-SAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADI 607
+AA A E ++ +E PEDK +I Q + EG+ AM GDG NDAPALA AD+
Sbjct: 474 PLTAAAIAAEA---GVDDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADV 530
Query: 608 GISMGISGSALATETGQVILMSNDIRKVPEAIRL 641
G++M SG+ A E ++ + ++ K+ E + +
Sbjct: 531 GVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEI 563
|
Length = 681 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-46
Identities = 137/489 (28%), Positives = 230/489 (47%), Gaps = 36/489 (7%)
Query: 177 ESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDG 236
E R +A A+ + + ++ G+ E +DA ++K ++ V GE IP DG V+ G
Sbjct: 87 EGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG 146
Query: 237 KCEVDEKTLTGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293
VDE +TGES PV K+ G V GT + ++ VE T+ + KM LVE
Sbjct: 147 LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEG 206
Query: 294 AQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCA 353
A K+ + + F+ T +IF+ + + P+A ++ F+L++ +L++ C
Sbjct: 207 ATRKKTPNE--IALFTLLMTLTIIFLVVILTMYPLAKFLN-----FNLSIAMLIALAVC- 258
Query: 354 LILST-----PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSE 408
LI +T + + + +L K G ++T V + DKTGTIT G +
Sbjct: 259 LIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA 318
Query: 409 FQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGE--- 465
F P+ + L+ P ++V+ I+ P++V +Y F E
Sbjct: 319 FIPVKS-SSFERLVKAAYESSIADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRM 376
Query: 466 -GIYGKIGGEEIYIG--NRKIAQ-RAGCGTVPS-----VDGPKMKGNTIGYIFSGASPVG 516
G+ K E+Y G N + + + G +P V G KG T + +G
Sbjct: 377 SGV--KFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILG 434
Query: 517 IFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDK 576
+ L D + G E +L+ +GI T M TGDN+ A ++ G ++ +E PEDK
Sbjct: 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--VDRFVAECKPEDK 492
Query: 577 AKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKV 635
+I + + +G AM GDG NDAPALA A++G++M SG+ A E +I + ++ K+
Sbjct: 493 INVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKL 551
Query: 636 PEAIRLARK 644
E + + ++
Sbjct: 552 MEVVLIGKQ 560
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-46
Identities = 154/559 (27%), Positives = 246/559 (44%), Gaps = 69/559 (12%)
Query: 134 AAIRN---FKLDINILVLIAVIGTIAMNDY------------IEAGIIVFLFTIAEWLES 178
A RN F + + L+ + TIA + I GI+ A + E+
Sbjct: 28 AQWRNPVMFIVWVGSLLTTCI--TIAPASFGMPGNNLALFNAIITGILFITVLFANFAEA 85
Query: 179 RASHKATAVMSSLMSIAPQKAIIA------GTGEEVDAGEVKLNTVLAVKAGEVIPIDGI 232
A + A SL +K A G ++V A ++K ++ V+AG+VIP DG
Sbjct: 86 VAEGRGKAQADSLKGT--KKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGE 143
Query: 233 VVDGKCEVDEKTLTGESYPVSKQKGS---TVWAGTINLNGYISVETTAVAEDCVVAKMAK 289
V++G VDE +TGES PV K+ G +V GT L+ ++ VE TA + + +M
Sbjct: 144 VIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIA 203
Query: 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSA 349
LVE AQ K+ + + T ++F+ + P A N +++ VLV+
Sbjct: 204 LVEGAQRRKTPNEIALTILLIALT--LVFLLVTATLWPFAAYGGN-----AISVTVLVAL 256
Query: 350 CPCALILST-----PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEF 404
C LI +T + + + ++ G ++ V + DKTGTIT G
Sbjct: 257 LVC-LIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNR 315
Query: 405 VMSEFQPLS-EDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFP 463
+ SEF P D ++S+ P ++V + L I ED +
Sbjct: 316 LASEFIPAQGVDEKTLADAAQLASL--ADDTPEGKSIVILAKQLGIR---EDDVQSLHAT 370
Query: 464 GEGIYGKIGGEEIYIGNRKIAQ-----------RAGCGTVP-----SVDGPKMKGNTIGY 507
+ I + N ++ + A G +P +VD +G T
Sbjct: 371 FVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLV 430
Query: 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQ-SAAMQAQEQLGNALNV 566
+ G+ L D + G E QL+ +GI+T M+TGDN+ +AA A E ++
Sbjct: 431 VCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA---GVDD 487
Query: 567 VHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQV 625
+E PEDK +I Q + EGK AM GDG NDAPALA AD+G++M SG+ A E +
Sbjct: 488 FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANM 546
Query: 626 ILMSNDIRKVPEAIRLARK 644
+ + +D K+ E + + ++
Sbjct: 547 VDLDSDPTKLIEVVHIGKQ 565
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 2e-41
Identities = 166/563 (29%), Positives = 235/563 (41%), Gaps = 135/563 (23%)
Query: 148 LIAVIGTIAMNDYIEAGIIVFLFTIAEWL--------------ESRASHKATAVMSSLMS 193
++ I TIA + G F I WL E R KA A SL
Sbjct: 44 ILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRG--KAQA--DSLRG 99
Query: 194 IAPQKAIIA------GTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTG 247
+K A G EEV A E++ ++ V+AGE+IP DG V++G VDE +TG
Sbjct: 100 A--KKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVDESAITG 157
Query: 248 ESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRF 304
ES PV ++ G S+V GT L+ +I + TA + + +M LVE A+ K
Sbjct: 158 ESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQK------ 211
Query: 305 VDKFSQYYTP------------AVIFISACVAVIPIA--LGVSNHKQWFHLALVVLVSAC 350
TP +IF+ + P A G L++ VLV+
Sbjct: 212 --------TPNEIALTILLAGLTIIFLLVVATLPPFAAYSGG-------ALSITVLVALL 256
Query: 351 PCALILSTPVVTYCALTKA---------------ATSGLLIKG-GDYLQTLAKVRFMAFD 394
C LI P T L A ATSG ++ GD V + D
Sbjct: 257 VC-LI---PT-TIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGD-------VDTLLLD 304
Query: 395 KTGTITRGEFVMSEFQPLSEDINLNTLLY--WVSSI-----ESKSSHPMSAALVEYGRS- 446
KTGTIT G SEF P+ + L +SS+ E +S +V +
Sbjct: 305 KTGTITLGNRQASEFLPV-PGVTEEELADAAQLSSLADETPEGRS-------IVVLAKQR 356
Query: 447 LSIEPKPEDVEDYQ--NFPGE----GIYGKIGGEEIYIG-----NRKIAQRAGCGTVPS- 494
++ + F + G+ + G EI G R + G P+
Sbjct: 357 FNLRERDLQSLHATFVPFSAQTRMSGV--DLDGREIRKGAVDAIRRYVESNGG--HFPAE 412
Query: 495 ----VDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQ 550
VD KG T + +G+ L D + G E +L+ +GI+T M+TGDN
Sbjct: 413 LDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNP 472
Query: 551 -SAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIG 608
+AA A E ++ +E PEDK +I Q + EG+ AM GDG NDAPALA AD+G
Sbjct: 473 LTAAAIAAEA---GVDDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 529
Query: 609 ISMGISGSALATETGQVI-LMSN 630
++M SG+ A E G ++ L SN
Sbjct: 530 VAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 3e-38
Identities = 132/571 (23%), Positives = 233/571 (40%), Gaps = 99/571 (17%)
Query: 149 IAVIGTIAMNDYIEAGIIVFLF----TIAEWLESRASHKATAVMSSLMSIAPQ-KAIIAG 203
A I IA+ ++++ II+ L TI E++A + A+ SL AP+ + + G
Sbjct: 44 AAAIIAIALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSL---APKARVLRDG 100
Query: 204 TGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC-EVDEKTLTGESYPVSKQKGSTVWA 262
+E+ A E+ V+ +K G+++P D + +G +VD+ LTGES PV+K+ G ++
Sbjct: 101 KWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYS 160
Query: 263 GTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISAC 322
G+ G TA + K A LV+ + +Q+ + K + ++ I
Sbjct: 161 GSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLF---LIVLIGVL 217
Query: 323 VAVIPIALGVSNHKQW---FHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGG 379
V + + L + + ALV+LV P A+ P V ++T A + L K
Sbjct: 218 VLIELVVLFFGRGESFREGLQFALVLLVGGIPIAM----PAVL--SVTMAVGAAELAKKK 271
Query: 380 DYLQTLAKVRFMA------FDKTGTITRGEFVMSEFQPLSEDINLN-TLLYWVSSIESKS 432
+ L + +A DKTGT+T + + E P + + LLY + +
Sbjct: 272 AIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREED 331
Query: 433 SHPMSAALVEYGRSLSIEPKPEDVEDYQNF-------------PGEGIYGKI--GGEEIY 477
+ A++ + L V ++ F P G K+ G ++
Sbjct: 332 QDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391
Query: 478 IG------------NRKIAQRAGCG----TVPSVDGPKMKGNTIGYIFSGASPVGIFCLS 521
+ K+ + A G V D + F +G+ L
Sbjct: 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEG------RWHF-----LGLLPLF 440
Query: 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL--------- 572
D R E + + + LG+ M+TGD+ + A + +LG N+ +++L
Sbjct: 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL 500
Query: 573 ------------------PEDKAKIINQFKQEGKT-AMIGDGINDAPALATADIGISMGI 613
PE K +I+ ++ G M GDG+NDAPAL AD+GI++
Sbjct: 501 PSGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG 560
Query: 614 SGSALATETGQVILMSNDIRKVPEAIRLARK 644
+ A A ++L + + +AI +RK
Sbjct: 561 ATDA-ARSAADIVLTEPGLSVIVDAILESRK 590
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 2e-27
Identities = 122/564 (21%), Positives = 217/564 (38%), Gaps = 119/564 (21%)
Query: 196 PQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDG-KCEVDEKTLTGESYPVSK 254
I G +++ ++ + ++++ G+V+P DG+ + G E+DE ++TGES P+ K
Sbjct: 168 KIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKK 227
Query: 255 --QKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF---- 308
+ + +GT+ G + TAV + K+ + +A + +Q + +
Sbjct: 228 GPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLI 287
Query: 309 ------SQYYTPAVIFISACVAVIPIALGVSNHK-----QWFHLALVVLVSACPCALILS 357
S V+ + +I + F +A+ ++V A P L L+
Sbjct: 288 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLA 347
Query: 358 TPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS---------- 407
+ ++ K L++ +T+ + DKTGT+T + VMS
Sbjct: 348 VTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLT--QNVMSVVQGYIGEQR 405
Query: 408 ----EFQP---------LSEDINLNTLLYWVSSIESKSSH---PMSAALVEYGRSLSIEP 451
+ L E I+LN+ V K + AL+++G L +
Sbjct: 406 FNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDY 465
Query: 452 ---KPEDVEDYQNFP--------------GEGIY--GKIGGEEIYIGN-RKIAQRAGCGT 491
+ E+ + + +P G Y + G EI + RK G T
Sbjct: 466 QEVRAEE-KVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEAT 524
Query: 492 VPSVDGPKMKGN-----------TIGYIF---------------SGASPVGIFCLSDACR 525
S D + TI + G + +G+ + D R
Sbjct: 525 PISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLR 584
Query: 526 TGAAEAVNQLKSLGIRTAMLTGDN--------QSAAMQAQEQLGNA----LNVVHSEL-- 571
G EAV + + GI M+TGDN ++ + L ++V+ E+
Sbjct: 585 PGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDP 644
Query: 572 -----------LPEDKAKIINQFKQEGKT-AMIGDGINDAPALATADIGISMGISGSALA 619
P DK ++ K G+ A+ GDG NDAPAL AD+G SMGISG+ +A
Sbjct: 645 ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVA 704
Query: 620 TETGQVILMSNDIRKVPEAIRLAR 643
E +IL+ ++ + A++ R
Sbjct: 705 KEASDIILLDDNFASIVRAVKWGR 728
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 8e-19
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA-----------MQAQEQLGNAL 564
G+ ++D R G EAV L + G+R M+TGD+Q A +Q G L
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL 580
Query: 565 NVVHSELL--------------PEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGI 609
+ + + L PE K KI+ ++ G AM GDG+NDAPAL ADIG+
Sbjct: 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 610 SMGISGSALATETGQVILMSNDIRKVPEAI 639
+MG +G+ +A E +IL +D + AI
Sbjct: 641 AMGQTGTDVAKEAADMILTDDDFATILSAI 670
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 7e-18
Identities = 48/225 (21%), Positives = 79/225 (35%), Gaps = 52/225 (23%)
Query: 392 AFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEP 451
FD GT+T GE V+ E + AL+E +L +
Sbjct: 5 VFDLDGTLTDGEPVVPEAE----------------------------ALLEAAAALGVAI 36
Query: 452 KPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSG 511
E+ E + ++ + + + +
Sbjct: 37 VIAAGENLTKEGREELVRRLLLRALAGEELLEELLRA-------GATVVAVLDLVVL--- 86
Query: 512 ASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSEL 571
G+ L+D GA EA+ +LK GI+ A+LTGDN+ A LG +V ++L
Sbjct: 87 ----GLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADL 142
Query: 572 -------LPEDK--AKIINQFK-QEGKTAMIGDGINDAPALATAD 606
P+ K + + + + M+GDG+ND PA A
Sbjct: 143 YGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 83.9 bits (207), Expect = 3e-16
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 54/313 (17%)
Query: 145 ILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKA--IIA 202
++++IA + AM+D+IE G+I + + + +KA M SL ++A A I
Sbjct: 66 MVLIIAAAISFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRN 125
Query: 203 GTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGESYPVSK------Q 255
G + +D+ ++ + +K G+ IP D +++ K + DE LTGES PV K
Sbjct: 126 GKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFG 185
Query: 256 KGSTVWAGT-INLNGYISVETTAVAEDCVVA------------------KMAKLVEEAQN 296
K G INL S T A+ +A + + E+
Sbjct: 186 KEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDP 245
Query: 297 SKSRIQ-RFVDKFSQYYTPAVI----------------FISACVAVIPIALGVSNHKQWF 339
+K R +++ K ++ T A + I C+A+I + ++ HK F
Sbjct: 246 NKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F 303
Query: 340 HL-------ALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMA 392
+ A+ + +S P +LI + + ++++ D L+ L V +
Sbjct: 304 DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDIC 363
Query: 393 FDKTGTITRGEFV 405
DKTGTIT+G+ +
Sbjct: 364 SDKTGTITQGKMI 376
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 8e-15
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA--------------------- 553
+G+ + D R A+A+ + ++ GIR M+TGDN+ A
Sbjct: 529 IGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSF 588
Query: 554 -------MQAQEQLGNALN-VVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALAT 604
M +Q + V+ S + P K++++ +++G+ AM GDG+NDAPAL
Sbjct: 589 TGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK 648
Query: 605 ADIGISMGISGSALATETGQVIL 627
ADIGI+MG SG+ +A E ++L
Sbjct: 649 ADIGIAMG-SGTEVAKEASDMVL 670
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-12
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 25/125 (20%)
Query: 528 AAEAVNQLKSLGIRTAMLTGDNQSAA--------MQAQ-------------EQLGNAL-- 564
A A+ LK+ G+ +LTGD++ A + A ++L N
Sbjct: 555 TAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAER 614
Query: 565 NVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETG 623
+ + L P K +I+ K+EG +GDGINDAPAL ADIGIS+ +A E
Sbjct: 615 TTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAA 673
Query: 624 QVILM 628
+IL+
Sbjct: 674 DIILL 678
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 7e-12
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---------- 565
G D + EA+ L GI +LTGDN+ + +++G N
Sbjct: 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEE 567
Query: 566 -------------VVHSELLPEDKAKIINQFKQEGKT-AMIGDGINDAPALATADIGISM 611
+ + L P K++II K+ G T +GDGINDAPAL AD+GIS+
Sbjct: 568 LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV 627
Query: 612 GISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662
+ + +A E +IL+ + + E + R +++ + ++ ++ G
Sbjct: 628 D-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFG 677
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-11
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 28/239 (11%)
Query: 183 KATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CE 239
K++ +M S ++ PQ+A++ GE+ ++A +V + ++ VK G+ IP D ++ + C+
Sbjct: 127 KSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCK 186
Query: 240 VDEKTLTGESYPVSKQKGST----------VWAGTINLNGYISVETTAVAEDCVVAKMAK 289
VD +LTGES P ++ T + T + G + V+ ++A
Sbjct: 187 VDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS 246
Query: 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVL--- 346
L +N K+ I ++ F T +F+ ++ + LG W A++ L
Sbjct: 247 LASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY----TWLE-AVIFLIGI 301
Query: 347 -VSACPCALILSTPVVTYC-ALT--KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITR 401
V+ P L L+T VT C LT + A L+K + ++TL + DKTGT+T+
Sbjct: 302 IVANVPEGL-LAT--VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 357
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 2e-11
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------------- 561
+G+ + D R +A AV + GI MLTGD A +++G
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEI 697
Query: 562 ----------------------NALNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGIND 598
AL +V + P+ K K+I + AM GDG+ND
Sbjct: 698 MDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVND 757
Query: 599 APALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARK 644
+P+L A++GI+MGI+GS +A + ++L ++ + AI R+
Sbjct: 758 SPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRR 803
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 5e-11
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 528 AAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG-----------------NALNV---- 566
AA A+ L+ G+ +LTGDN + ++G AL
Sbjct: 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEE 614
Query: 567 --VHSELLPEDKAKIINQFKQEGKT-AMIGDGINDAPALATADIGISMGISGSALATETG 623
V ++L P K++++ + G T +GDGINDAPAL AD+GIS+ SG+ +A E+
Sbjct: 615 RTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESA 673
Query: 624 QVILMSNDI 632
+IL+ +
Sbjct: 674 DIILLEKSL 682
|
Length = 903 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 3e-10
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 56/196 (28%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQ-------------SAAMQAQEQLG 561
VG+ + D R +AV + +S GI+ M+TGD+ S + E +
Sbjct: 560 VGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIA 619
Query: 562 NALNVVHSELLPED-KAKIIN-----------------------------QFK------- 584
LN+ S++ P D KA +++ Q K
Sbjct: 620 ARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679
Query: 585 --QEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLA 642
Q A+ GDG+ND+PAL ADIG++MGI+GS ++ + +IL+ ++ + +
Sbjct: 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739
Query: 643 RKAHWKVIENIAVSIA 658
R + +N+ SIA
Sbjct: 740 R----LIFDNLKKSIA 751
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 5e-08
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-K 588
E + +L + + + +GD + + +Q E +G + V + PE KAKII + K+ K
Sbjct: 37 ETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEK 95
Query: 589 TAMIGDGINDAPALATADIGI 609
M+G+G ND AL AD+GI
Sbjct: 96 VVMVGNGANDILALREADLGI 116
|
Length = 152 |
| >gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-07
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
K+ V G+ C V +E L+ ++GV V V + T V D+ + I++A+
Sbjct: 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE 61
Query: 70 QARFEANVRA 79
A ++
Sbjct: 62 DAGYKVEEIK 71
|
Length = 71 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 30/146 (20%), Positives = 46/146 (31%), Gaps = 41/146 (28%)
Query: 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG---NALNVVHSE----------- 570
GA E V LK+ G + +++G E+LG N + +
Sbjct: 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGP 138
Query: 571 -LLPEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGISMGISGSALATETGQ 624
E KAK + + E +T GD ND P L A + I+
Sbjct: 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA-------------- 184
Query: 625 VILMSNDIRKVPEAIRLARKAHWKVI 650
+ P+ LA W +
Sbjct: 185 -------VNPKPKLRALADVRIWPID 203
|
Length = 212 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 6e-06
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 54/310 (17%)
Query: 143 INILVLIAVI---------GTIAMNDYIEAGIIVFLFTIAE-----WLESRASHKATAVM 188
+ IL+L A + G + ++E +I L +A W E A KA +
Sbjct: 10 VRILLLAACVSFVLAWFEEGEETVTAFVEPFVI-LLILVANAIVGVWQERNA-EKA---I 64
Query: 189 SSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC-EVDEKTL 245
+L + A + G + A ++ ++ + G+ +P D V+ K VD+ L
Sbjct: 65 EALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSIL 124
Query: 246 TGESYPVSKQ-------------KGSTVWAGTINLNGYIS--VETTAVAEDCVVAKMAKL 290
TGES V+K K + +++GT+ + G V T ++ + + K+
Sbjct: 125 TGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTE--IGKIRDE 182
Query: 291 VEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPI------ALGVSNHK---QWFHL 341
+ A+ + +Q+ +D+F + + + I V VI I ALG + +F +
Sbjct: 183 MRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKI 242
Query: 342 ALVVLVSACPCALILSTPVVTYC-AL--TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGT 398
A+ + V+A P L V+T C AL K A +++ ++TL + DKTGT
Sbjct: 243 AVALAVAAIPEGL---PAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGT 299
Query: 399 ITRGEFVMSE 408
+T + + +
Sbjct: 300 LTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233437 TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 9e-06
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 20/113 (17%)
Query: 525 RTGAAEAVNQLKSLGIRTAMLTG------DNQSAAMQAQEQLGNALNV---------VHS 569
R A E V LK G++TA+++G + + N L
Sbjct: 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIV 141
Query: 570 ELLPEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGISMGISGSA 617
+ ++K + + + K+E +T +GD ND P ADI IS+G G A
Sbjct: 142 RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHA 194
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. Length = 201 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-05
Identities = 60/295 (20%), Positives = 126/295 (42%), Gaps = 29/295 (9%)
Query: 136 IRNFKLDINILVLI--AVIGTIAMN--DYIEAGIIVFLFTIAEWLESRASHKATAVMSSL 191
+ F + IL+LI AVI N D + + + + +++ S K+ ++ L
Sbjct: 55 LSQFVKNPLILLLIASAVISVFMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL 114
Query: 192 MSIAPQKAII-AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDG-KCEVDEKTLTGES 249
+ P+ +I G E V A + ++ + G+ +P D +V+ +DE LTGE+
Sbjct: 115 --VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGET 172
Query: 250 YPVSK--------------QKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
PVSK ++ + + GT+ G+ + + K+++ +
Sbjct: 173 TPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIE 232
Query: 296 NSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW---FHLALVVLVSACPC 352
K+ +Q+ +D + + +S V + +G K W F +++ + V+A P
Sbjct: 233 KPKTPLQKSMDLLGKQLS----LVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPE 288
Query: 353 ALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407
L + V + + + +++ ++TL V + DKTGT+T+ ++
Sbjct: 289 GLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVT 343
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-05
Identities = 67/339 (19%), Positives = 132/339 (38%), Gaps = 38/339 (11%)
Query: 136 IRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAE----WLESRASHKATA----V 187
IR F ++ + + + +D II + + ESRA A A V
Sbjct: 64 IRAFNNPFIYILAMLMGVSYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV 123
Query: 188 MSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLT 246
++ + G+ +EV + ++ + AG++IP D V+ + +++ LT
Sbjct: 124 KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALT 183
Query: 247 GESYPVSK-------------QKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293
GES PV K ++ + + GT L+G+ A +A E
Sbjct: 184 GESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE 243
Query: 294 AQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW--FHLALVVLVSACP 351
+ ++ + V S+ + F+ V V+ + G+ F AL V V P
Sbjct: 244 -RRGQTAFDKGVKSVSKLL---IRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTP 299
Query: 352 CALILSTPVVTYCALTKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407
L P++ L K A + +++K +Q + + DKTGT+T+ + +
Sbjct: 300 EML----PMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELE 355
Query: 408 EFQPLSEDINLNTL-LYWV-SSIESKSSHPMSAALVEYG 444
+ S + + L + W+ S ++ + + A++
Sbjct: 356 KHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKL 394
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-05
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V G+ C+ +E L L GV VSV + + V V D + ++ KA+ +A +
Sbjct: 2 LRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAGY 61
Query: 74 E 74
E
Sbjct: 62 E 62
|
Length = 62 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-05
Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 55/309 (17%)
Query: 160 YIEAGIIVFLFTIAEWLESRASHKATAVMSSL--MSIAPQKAII--AGTGEEVDAGEVKL 215
Y + IVF+ + + L K M L M PQ I+ G + + E+
Sbjct: 193 YYYSLCIVFMSSTSISLSVYQIRK---QMQRLRDMVHKPQSVIVIRNGKWVTIASDELVP 249
Query: 216 NTVLAVKA--GEVIPIDGIVVDGKCEVDEKTLTGESYPVSK------------------Q 255
++++ + +P D +++ G C V+E LTGES PV K
Sbjct: 250 GDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETS 309
Query: 256 KGSTVWAGT--INLNGYISVETTAVAEDCVVAKMA------KLVEEAQNSKSRIQRFVDK 307
K ++ GT + + Y +T +A +V + +LV K R+ +F
Sbjct: 310 KKHVLFGGTKILQIRPYPG-DTGCLA---IVVRTGFSTSKGQLVRSILYPKPRVFKF--- 362
Query: 308 FSQYYTPAVIFIS--ACVAVIPIAL----GVSNHKQWFHL---ALVVLVSACPCALILST 358
Y + FI A +A+I + + + + +L ++ P AL
Sbjct: 363 ----YKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418
Query: 359 PVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL 418
+ +L + G+ + K+ FDKTGT+T + Q LS +
Sbjct: 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF 478
Query: 419 NTLLYWVSS 427
++ SS
Sbjct: 479 LKIVTEDSS 487
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 2e-05
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 573 PEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGIS-GSALATETGQVILMSN 630
P+ K ++ ++ M GDG ND AL AD+GIS+ + S A T +
Sbjct: 787 PDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSK----LA 842
Query: 631 DIRKVPEAIRLARKA 645
I VP IR R A
Sbjct: 843 SISCVPNVIREGRCA 857
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELLPEDKAKII 580
GA E V LK G + A+++G A +++LG N L V +L + I+
Sbjct: 89 GAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIV 148
Query: 581 N-QFKQEG-------------KTAMIGDGINDAPALATADIGISMG 612
+ +K + T +GDG ND + A +GI+
Sbjct: 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG---------NALNVVHSELLPEDKA 577
G E + LKS G + ++T + + LG +V + PE
Sbjct: 93 GVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLL 152
Query: 578 KIINQFKQEGKTA-MIGDGINDAPALATAD---IGISMGI-SGSALATETGQVILMSNDI 632
++ + + + A M+GD +ND A A +G++ G S LA V++ + +
Sbjct: 153 LLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSL 210
Query: 633 RKVPEAI 639
++ +
Sbjct: 211 AELLALL 217
|
Length = 220 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG-NALNVVHSEL-- 571
+ + R ++ + L +++G + + LG + +NVV +EL
Sbjct: 17 LLLLEALAEDRRLGLLGLSDAEELLELVVIVSGSPEPLVRPVAKALGIDDVNVVGTELEN 76
Query: 572 -----------LPEDKAKIINQFKQE---GKTAMIGDGINDAPAL 602
E KA + + Q+ +GD I+D PAL
Sbjct: 77 VLVDGRLTGKLDGEGKAAALKRLAQKIGRYPVVAVGDSISDLPAL 121
|
Length = 122 |
| >gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein | Back alignment and domain information |
|---|
Score = 37.1 bits (86), Expect = 0.003
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQ 70
K F V G+ C+ V IE + +EGV +V V + V+V DA +S +I +A+
Sbjct: 1 KQTFQVKGMSCNHCVDKIEKFVGEIEGVSKVKVQLEKEKVVVEFDAPNVSATEICEAILD 60
Query: 71 ARFEA 75
A +E
Sbjct: 61 AGYEV 65
|
This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases [Transport and binding proteins, Cations and iron carrying compounds]. Length = 66 |
| >gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.003
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V G+ C+ V IE L+ L GV+ V V + + V +D +S ++++A+ A +
Sbjct: 2 LSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDP-EVSPEELLEAIEDAGY 60
Query: 74 EA 75
+A
Sbjct: 61 KA 62
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1007 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.95 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.61 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 99.04 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.02 | |
| COG2608 | 71 | CopZ Copper chaperone [Inorganic ion transport and | 98.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.87 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.8 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.66 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.64 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.64 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.63 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.61 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.58 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.58 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.51 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.5 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.48 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.45 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.41 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.41 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.4 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.39 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.35 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.29 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.28 | |
| PLN02887 | 580 | hydrolase family protein | 98.25 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.18 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.18 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.09 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.09 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.07 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.06 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.05 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.04 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.02 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.87 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.85 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.84 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.78 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.78 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.75 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.7 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.63 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.61 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.58 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.55 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.54 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.48 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.38 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.37 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.28 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.23 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.23 | |
| TIGR00003 | 68 | copper ion binding protein. This model describes a | 97.21 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.18 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.15 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.14 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.09 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.03 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.99 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.99 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.91 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.89 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.79 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.77 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.75 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.73 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.67 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.63 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.63 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.54 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.53 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.52 | |
| PLN02957 | 238 | copper, zinc superoxide dismutase | 96.49 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.45 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.43 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.42 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.38 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.35 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.32 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.22 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.22 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.16 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.15 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.12 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.09 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.08 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.9 | |
| PLN02940 | 382 | riboflavin kinase | 95.86 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.66 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.66 | |
| KOG4656 | 247 | consensus Copper chaperone for superoxide dismutas | 95.62 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.61 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.6 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.59 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.55 | |
| PLN02811 | 220 | hydrolase | 95.49 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.19 | |
| KOG1603 | 73 | consensus Copper chaperone [Inorganic ion transpor | 95.16 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.12 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.1 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.09 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.83 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.8 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.76 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.46 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.25 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.2 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.12 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.1 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.85 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.75 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.69 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.69 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 93.6 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.44 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.39 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 92.85 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.59 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.55 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.92 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 91.74 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.19 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 90.95 | |
| PLN03017 | 366 | trehalose-phosphatase | 90.72 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.53 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 90.03 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.02 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.89 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.48 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 89.46 | |
| PRK14054 | 172 | methionine sulfoxide reductase A; Provisional | 88.84 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 88.71 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 87.91 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 87.74 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 87.65 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 87.09 | |
| PRK00058 | 213 | methionine sulfoxide reductase A; Provisional | 86.84 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 86.48 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 85.99 | |
| TIGR02052 | 92 | MerP mercuric transport protein periplasmic compon | 85.66 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 84.82 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 83.44 | |
| PRK13014 | 186 | methionine sulfoxide reductase A; Provisional | 82.97 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 82.89 | |
| PRK05528 | 156 | methionine sulfoxide reductase A; Provisional | 81.68 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 81.62 | |
| COG0225 | 174 | MsrA Peptide methionine sulfoxide reductase [Postt | 81.34 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 80.32 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-123 Score=1115.57 Aligned_cols=679 Identities=37% Similarity=0.593 Sum_probs=613.9
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCccc-HHHHHHHhhhcccccccccccc--cccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLIS-QHQIVKALNQARFEANVRAYGG--TSYQ 86 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s-~~~I~~aL~~aGy~as~~~~g~--~~~~ 86 (1007)
.+..+.|+||+|++|+++|| .|++++||.++++|+.++++.+.||+...+ .+++.+.++..||.+....... ....
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~ 80 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARLTAALADPAEAE 80 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccccccccchhhhh
Confidence 35689999999999999999 999999999999999999999999987666 7899999999999876511110 0000
Q ss_pred c---CCCchHHHHHHHHHHHHH----HHHhh----hhH-HHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHH
Q 001837 87 K---KWPSPYAMACGVLLAISI----LKYVY----HPL-RWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGT 154 (1007)
Q Consensus 87 ~---~~~~~~~~~~gill~isl----~~~~~----~~l-~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~ 154 (1007)
. .+......+.+++.+..+ ..++. .++ .++++++++++++|||+.+|+.++++.++||+|+.++++++
T Consensus 81 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A 160 (713)
T COG2217 81 ARLLRELLRRLIIAGLLTLPLLLLSLGLLLGAFLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGA 160 (713)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 0 001111222222221111 11111 112 23456778899999999999999999999999999999999
Q ss_pred HhhhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEec-CC--EEeeCCCcccCcEEEEeC
Q 001837 155 IAMNDY--------IEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAG-TG--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 155 ~~~~~y--------~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~r-dg--~~V~~~dLv~GDIV~L~~ 223 (1007)
++++.| .+++++++++++++++|.+++.|+.+.++.|+++.|.++++++ || ++||+++|++||+|+|+|
T Consensus 161 ~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~Vrp 240 (713)
T COG2217 161 YAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRP 240 (713)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECC
Confidence 999988 8889999999999999999999999999999999999996665 55 899999999999999999
Q ss_pred CCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHH
Q 001837 224 GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQR 303 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~ 303 (1007)
||+||+||+|++|+..||||+|||||.|+.|.+|+.|++||+|.+|.++++|+++|.+|.+++|.+++++++.+|+|+|+
T Consensus 241 GE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqr 320 (713)
T COG2217 241 GERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQR 320 (713)
T ss_pred CCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhh
Q 001837 304 FVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQ 383 (1007)
Q Consensus 304 ~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE 383 (1007)
++||++.||+|++++++++.|++|++++..++..|+++++++|+++|||+|.+++|+++..++.+++++|||+|++.++|
T Consensus 321 laDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE 400 (713)
T COG2217 321 LADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALE 400 (713)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHH
Confidence 99999999999999999999997777765688899999999999999999999999999999999999999999999999
Q ss_pred hccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceecc
Q 001837 384 TLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFP 463 (1007)
Q Consensus 384 ~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~ 463 (1007)
+++++|+++||||||||+|+++|.++...+. +.+++|.+++++|..|.||+++||+++++..+. ..+..+++++
T Consensus 401 ~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~----~~~~~~~~i~ 474 (713)
T COG2217 401 RLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DEDELLALAAALEQHSEHPLAKAIVKAAAERGL----PDVEDFEEIP 474 (713)
T ss_pred hhccCCEEEEeCCCCCcCCceEEEEEecCCC--CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCC----CCccceeeec
Confidence 9999999999999999999999999998765 778999999999999999999999999988772 2345599999
Q ss_pred CCceEEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCC
Q 001837 464 GEGIYGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540 (1007)
Q Consensus 464 g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI 540 (1007)
|.|+.+.++|+.+.+|+++|+.+.+.... ...+.+..+|.++++++.|++++|+|.+.|++||+++++|++||++|+
T Consensus 475 G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi 554 (713)
T COG2217 475 GRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGI 554 (713)
T ss_pred cCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCC
Confidence 99999999999999999999987775432 224455668999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHH
Q 001837 541 RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALA 619 (1007)
Q Consensus 541 kv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A 619 (1007)
+++|+||||+.+|.+||+++||+ +|+|+++||||+++|+.||++| +|+|||||+||+|||++|||||||| +|+|+|
T Consensus 555 ~~~mLTGDn~~~A~~iA~~lGId--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 555 KVVMLTGDNRRTAEAIAKELGID--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred eEEEEcCCCHHHHHHHHHHcChH--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHH
Confidence 99999999999999999999998 9999999999999999999998 9999999999999999999999999 699999
Q ss_pred HhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 001837 620 TETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHE 698 (1007)
Q Consensus 620 ~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~~ 698 (1007)
+++||++|+++|+..++++|+++|+++++|+||++|+++||+++|+++++|+.+||+|.+.|.+++++|++||+||++.
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999975
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-120 Score=1066.93 Aligned_cols=696 Identities=41% Similarity=0.662 Sum_probs=645.6
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccccccccccccccc---
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGTSYQ--- 86 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~~~~--- 86 (1007)
.+++|.|.||+|.+|+..||+.+.+++||++++++..++++.|.|||..+++.++.+.++..++.+..+.+......
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l 225 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPYGDTTFKNSL 225 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeeccccchhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999888775543332
Q ss_pred ------cCCCchHHHHHHHHHHHHHHHHhhhhHHH---------------------HHHHhhhhchHHHHHHHHHHHHcC
Q 001837 87 ------KKWPSPYAMACGVLLAISILKYVYHPLRW---------------------FALGAVAIGIFPIILKGLAAIRNF 139 (1007)
Q Consensus 87 ------~~~~~~~~~~~gill~isl~~~~~~~l~~---------------------l~l~~~~~~~~p~~~~a~~~l~~~ 139 (1007)
.+|+++++..+++.+..+|+.++++++.| +.+++.+++++|||..||++++++
T Consensus 226 ~~~~ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g 305 (951)
T KOG0207|consen 226 KHKEEIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRG 305 (951)
T ss_pred hhhhHHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcC
Confidence 67888887776666655555544444333 113445678899999999999999
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC
Q 001837 140 KLDINILVLIAVIGTIAMNDYIEAGIIVF---------------LFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT 204 (1007)
Q Consensus 140 ~l~i~~Li~ia~~~~~~~~~y~~a~~Il~---------------l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd 204 (1007)
..|||+|+.++...+|+++.+.+...+++ ++++++|+|.+++.|+...+..|+++.|.++.++.+
T Consensus 306 ~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~ 385 (951)
T KOG0207|consen 306 SANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIED 385 (951)
T ss_pred CCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeec
Confidence 99999999999999999987776665555 889999999999999999999999999999999988
Q ss_pred C---EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecc
Q 001837 205 G---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAED 281 (1007)
Q Consensus 205 g---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~ 281 (1007)
| ++|+++.|++||+|.|.||++||+||+|++|+++||||++|||++||.|++|+.|.+||++.+|.+.++++++|.|
T Consensus 386 g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~d 465 (951)
T KOG0207|consen 386 GSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGD 465 (951)
T ss_pred CCcceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEecccc
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC----------CchhHHHHHHhhhhhhhcc
Q 001837 282 CVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGV----------SNHKQWFHLALVVLVSACP 351 (1007)
Q Consensus 282 T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~----------~~~~~~~~~al~vLv~a~P 351 (1007)
|.+++|.+++++++..++|+|+++|+++.||+|+++++++.++++|.+++. ..+..+|++++++++++||
T Consensus 466 ttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACP 545 (951)
T KOG0207|consen 466 TTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACP 545 (951)
T ss_pred chHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECc
Confidence 999999999999999999999999999999999999999999999998876 4567789999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhc
Q 001837 352 CALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESK 431 (1007)
Q Consensus 352 ~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~ 431 (1007)
|+|++++|++++.+....+++|+|+|+.++||.+.++++|+||||||||+|++.|.++..+.+..+..++|+++++.|..
T Consensus 546 CaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~ 625 (951)
T KOG0207|consen 546 CALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESG 625 (951)
T ss_pred hhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999988878899999999999999
Q ss_pred CCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc--eEEEECCEEEEEecHHHHHHhCCCCCCC----cCCcCCCCCeE
Q 001837 432 SSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG--IYGKIGGEEIYIGNRKIAQRAGCGTVPS----VDGPKMKGNTI 505 (1007)
Q Consensus 432 s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G--i~~~i~g~~i~ig~~~~~~~~~~~~~~~----~~~~~~~g~~~ 505 (1007)
+.||+++||++|+++.....++..+.+++.+||+| +...+++..+.+||++|+.+.+....+. .++.+..|+++
T Consensus 626 SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tv 705 (951)
T KOG0207|consen 626 SEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTV 705 (951)
T ss_pred CcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceE
Confidence 99999999999999988777778888999999999 6688999999999999999998875433 34456789999
Q ss_pred EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh
Q 001837 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ 585 (1007)
Q Consensus 506 i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~ 585 (1007)
.+++.|++++|++.++|++|||+..+|..||++|++++|+||||..+|+++|+++||+ .|||++.|+||.++|+.||+
T Consensus 706 v~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~ 783 (951)
T KOG0207|consen 706 VYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVLPEQKAEKIKEIQK 783 (951)
T ss_pred EEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccCchhhHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred CC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 586 EG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGII 664 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i 664 (1007)
+| .|+|||||+||+|||.+|||||+|| .|+++|.++|||||+.+|+..++.+|+++|+++++|++|+.|++.||+++|
T Consensus 784 ~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 784 NGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI 862 (951)
T ss_pred cCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 96 9999999999999999999999999 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh------HHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCcccc
Q 001837 665 ALALGGH------PLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIK 708 (1007)
Q Consensus 665 ~la~~g~------~~~~~ail~~~~s~l~vvlNSlrll~~~~~~~~~~~r 708 (1007)
+++++++ ++||+|.+.+.++++.+++||++|++++++...+.||
T Consensus 863 pIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~ 912 (951)
T KOG0207|consen 863 PIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYR 912 (951)
T ss_pred hhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhcccccccccee
Confidence 8887654 3799999999999999999999999998887776666
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-108 Score=1009.13 Aligned_cols=682 Identities=32% Similarity=0.530 Sum_probs=606.1
Q ss_pred eeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccccccc-cc
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGTSY-QK 87 (1007)
Q Consensus 9 ~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~~~-~~ 87 (1007)
..+..+.++||+|++|++.+|+.+.+.+||..+++++.++++.+.|++.. . +++.+.+++.||.+........+. ..
T Consensus 52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~ 129 (741)
T PRK11033 52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-R-AQVESAVQKAGFSLRDEQAAAAAPESR 129 (741)
T ss_pred CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc-h-HHHHHHHHhcccccccccchhhhHHHH
Confidence 34678999999999999999999999999999999999999999998763 3 777788888899865432111111 01
Q ss_pred CCC-chHHHHHHHHHHHHHH-HHhhhhHHHH-HHHhhhhchHHHHHHHHHHHHcCc-ccHHHHHHHHHHHHHhhhhHHHH
Q 001837 88 KWP-SPYAMACGVLLAISIL-KYVYHPLRWF-ALGAVAIGIFPIILKGLAAIRNFK-LDINILVLIAVIGTIAMNDYIEA 163 (1007)
Q Consensus 88 ~~~-~~~~~~~gill~isl~-~~~~~~l~~l-~l~~~~~~~~p~~~~a~~~l~~~~-l~i~~Li~ia~~~~~~~~~y~~a 163 (1007)
.|. ....++++.++++++. ..+.+++.|+ ++++++++++||+++||+.++++. ++|++|+.++++++++++.|.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~~~~a 209 (741)
T PRK11033 130 LKSENLPLITLAVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIGATAEA 209 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHcchHHH
Confidence 111 1111112222222221 1111222333 334567889999999999999988 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 164 ~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++++++++++|+|.++++|+++.+++|+++.|.+++++|+| ++|++++|+|||+|+|++||+||+||+|++|++.||
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vd 289 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFD 289 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEee
Confidence 999999999999999999999999999999999999999999 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHH
Q 001837 242 EKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISA 321 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~ 321 (1007)
||+|||||.|+.|++|+.||+||++.+|.++++|+++|.+|.++||.+++++++.+++|+|+.+++++++|+|+++++++
T Consensus 290 es~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~ 369 (741)
T PRK11033 290 ESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVAL 369 (741)
T ss_pred cccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCcccccc
Q 001837 322 CVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITR 401 (1007)
Q Consensus 322 l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~ 401 (1007)
+++++|+++...++..|+++++++|+++|||+|.+++|+++..++.+++|+||++|++.++|+|+++|+||||||||||+
T Consensus 370 ~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~ 449 (741)
T PRK11033 370 LVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTE 449 (741)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcC
Confidence 99998866655678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECCEEEEEecH
Q 001837 402 GEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNR 481 (1007)
Q Consensus 402 g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~ 481 (1007)
|+|+|.++.+.+. ++.++++.+++++|..+.||+++||++++++.++.. ...++++..+|.|+.+.++|..+.+|++
T Consensus 450 g~~~v~~~~~~~~-~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~ 526 (741)
T PRK11033 450 GKPQVTDIHPATG-ISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAI--PEAESQRALAGSGIEGQVNGERVLICAP 526 (741)
T ss_pred CceEEEEEEecCC-CCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC--CCCcceEEEeeEEEEEEECCEEEEEecc
Confidence 9999999987543 567889999999999999999999999998877653 2456788889999999999999999999
Q ss_pred HHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Q 001837 482 KIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG 561 (1007)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG 561 (1007)
+++.+.........+.+..+|.++++++.|++++|++.|+|++||+++++|++|+++|++++|+|||+..+|.++|+++|
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 527 GKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred hhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 98754211111123445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHH
Q 001837 562 NALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 562 I~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
|. ++++++|+||..+|+.||+.+.|+|||||+||+|||++|||||+|| +++++++++||++++++++..|+.++++
T Consensus 607 i~---~~~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~ 682 (741)
T PRK11033 607 ID---FRAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIEL 682 (741)
T ss_pred CC---eecCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 96 7889999999999999997779999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 001837 642 ARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHET 699 (1007)
Q Consensus 642 gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~~~ 699 (1007)
||+++++|+||+.|+++||+++++++++|+.+||+++++|.++++++++||+|++|++
T Consensus 683 sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~Nslrl~~~~ 740 (741)
T PRK11033 683 SRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTANALRLLRKR 740 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999999999999999999999765
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-100 Score=956.85 Aligned_cols=678 Identities=26% Similarity=0.427 Sum_probs=590.4
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccccc-c--ccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGT-S--YQK 87 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~-~--~~~ 87 (1007)
+..+.++||+|.+|++.+++.+.+.+||..+.+++.+++..+.+. .+.+++.+.+++.||.+.+...+.. . ...
T Consensus 100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~---~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~ 176 (834)
T PRK10671 100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS---ASPQDLVQAVEKAGYGAEAIEDDAKRRERQQE 176 (834)
T ss_pred eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc---CCHHHHHHHHHhcCCCccccccccchhhhhhh
Confidence 567899999999999999999999999999999999999888732 3567788888888987654322110 0 000
Q ss_pred ---CC--CchHHHHHH-HH----HHHHHHH-Hh-hhh---HHHH-----HHHhhhhchHHHHHHHHHHHHcCcccHHHHH
Q 001837 88 ---KW--PSPYAMACG-VL----LAISILK-YV-YHP---LRWF-----ALGAVAIGIFPIILKGLAAIRNFKLDINILV 147 (1007)
Q Consensus 88 ---~~--~~~~~~~~g-il----l~isl~~-~~-~~~---l~~l-----~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li 147 (1007)
.+ ...+.+..+ ++ ++++++. ++ +.+ ..|+ ++++++++++||+++||+.+++++++||+|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~ 256 (834)
T PRK10671 177 TAQATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLV 256 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHH
Confidence 00 011111111 11 1112211 01 111 1232 2456778899999999999999999999999
Q ss_pred HHHHHHHHhhhh----------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEe
Q 001837 148 LIAVIGTIAMND----------------YIE-AGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEV 208 (1007)
Q Consensus 148 ~ia~~~~~~~~~----------------y~~-a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V 208 (1007)
+++++.+|+++. |++ ++++++++.+++|+|.+.+.|+.+.+++|+++.|.+++++|+| ++|
T Consensus 257 ~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 257 ALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEE
Confidence 999999987642 555 5778899999999999999999999999999999999999887 789
Q ss_pred eCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhH
Q 001837 209 DAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMA 288 (1007)
Q Consensus 209 ~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~ 288 (1007)
++++|+|||+|+|++||+||+||+|++|++.||||+|||||.|+.|++|+.||+||+|.+|.+.++|+++|.+|.+++|.
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~ 416 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRII 416 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCC-chhHHHHHHhhhhhhhccccchhhHHHHHHHHHH
Q 001837 289 KLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVS-NHKQWFHLALVVLVSACPCALILSTPVVTYCALT 367 (1007)
Q Consensus 289 ~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~-~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~ 367 (1007)
+++++++..++++|+.+++++++|+|++++++++.+++|++.+.. .+...+.+++++|+++|||+|++++|+++..++.
T Consensus 417 ~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~ 496 (834)
T PRK10671 417 RMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVG 496 (834)
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999988887765422 1344577899999999999999999999999999
Q ss_pred HHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhC
Q 001837 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSL 447 (1007)
Q Consensus 368 ~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~ 447 (1007)
+++++||++|+++++|+|+++|++|||||||||+|+|+|.++...+. .+..+++.+++++|..+.||+++||+++++..
T Consensus 497 ~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~-~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~ 575 (834)
T PRK10671 497 RAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG-VDEAQALRLAAALEQGSSHPLARAILDKAGDM 575 (834)
T ss_pred HHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999876543 56778899999999999999999999988643
Q ss_pred CCCCCCCCcccceeccCCceEEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcc
Q 001837 448 SIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDAC 524 (1007)
Q Consensus 448 ~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~l 524 (1007)
. ...+.+++.++|.|+.+.++|..+.+|+++++.+.+.... +..+.+...|.++++++.|+.++|++.+.|++
T Consensus 576 ~----~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~ 651 (834)
T PRK10671 576 T----LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPL 651 (834)
T ss_pred C----CCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcc
Confidence 2 2346788899999999999999999999999876554321 11234456788999999999999999999999
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHh
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk 603 (1007)
||+++++|++|++.|++++|+|||+..+|..+++++||+ .+|+++.|++|.++|+.|+..| .|+|+|||.||++||+
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~ 729 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALA 729 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999998 8999999999999999
Q ss_pred hCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hh-hHHHHH
Q 001837 604 TADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL------GG-HPLVWA 676 (1007)
Q Consensus 604 ~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~------~g-~~~~~~ 676 (1007)
+|||||+|| ++++.++++||++++++++..|+.++++||+++++|+||+.|+++||++++++++ +| +++||+
T Consensus 730 ~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~ 808 (834)
T PRK10671 730 QADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVV 808 (834)
T ss_pred hCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHH
Confidence 999999999 8999999999999999999999999999999999999999999999999999987 45 568899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccc
Q 001837 677 AVLADVGTCLIVILNSMLLLHET 699 (1007)
Q Consensus 677 ail~~~~s~l~vvlNSlrll~~~ 699 (1007)
|.+.|.+++++|++||+||+|++
T Consensus 809 a~~~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 809 AGAAMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HHHHhcccceeehhhhHHhcCCC
Confidence 99999999999999999997544
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-92 Score=867.44 Aligned_cols=579 Identities=22% Similarity=0.343 Sum_probs=484.2
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHH
Q 001837 73 FEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVI 152 (1007)
Q Consensus 73 y~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~ 152 (1007)
.+.+...+|+|....+.+..|. .|+..|++|+.|+++++.+
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~~---------~~~~~~~~~~~~lL~~aa~------------------------------ 47 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPLL---------KFLGFFWNPLSWVMEAAAI------------------------------ 47 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHHH---------HHHHHHhchHHHHHHHHHH------------------------------
Confidence 3445567788887654444332 2566777777765544333
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCccccc
Q 001837 153 GTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPID 230 (1007)
Q Consensus 153 ~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaD 230 (1007)
+++++++|.++++++++++++..++.++++++++.+++|.++.|.+++|+||| ++|+++||+|||+|.|++||+||||
T Consensus 48 ~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 48 IAIALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred HHHhhcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 23455778899999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred EEEEece-eeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHH
Q 001837 231 GIVVDGK-CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS 309 (1007)
Q Consensus 231 giVl~G~-~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~ 309 (1007)
|+|++|+ +.||||+|||||.|+.|.+|+.+|+||.|.+|.++++|++||.+|.+|+|.+++++++.+++++|+.+++++
T Consensus 128 g~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~ 207 (755)
T TIGR01647 128 CRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIG 207 (755)
T ss_pred EEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 9999998 999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCcc
Q 001837 310 QYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVR 389 (1007)
Q Consensus 310 ~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd 389 (1007)
++++++++++++++++++++....++..++.+++++++++|||+||+++|++++.++++|+++|+++|+++++|+||.+|
T Consensus 208 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 208 LFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 99999988888888877766344677888999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhh-hhcCCChHHHHHHHHhhhCCCCCCCCCcccceec--cCCc
Q 001837 390 FMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSI-ESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNF--PGEG 466 (1007)
Q Consensus 390 ~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asl-e~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~--~g~G 466 (1007)
+||||||||||+|+|+|.+++..++.++.++++.+++.. +..++||++.||++++.+.+.........+...+ .+++
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~ 367 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKR 367 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCe
Confidence 999999999999999999998765446677777777654 4678999999999988754311101111111112 3556
Q ss_pred eEEEE----CCEE--EEEecHHHHHHhCCCC-------CCCcCCcCCCCCeEEEEEE-----CCEEEEEEEecCcccccH
Q 001837 467 IYGKI----GGEE--IYIGNRKIAQRAGCGT-------VPSVDGPKMKGNTIGYIFS-----GASPVGIFCLSDACRTGA 528 (1007)
Q Consensus 467 i~~~i----~g~~--i~ig~~~~~~~~~~~~-------~~~~~~~~~~g~~~i~v~~-----d~~~lGli~l~D~lR~~a 528 (1007)
+.+.+ +|+. +..|+++++.+..... ....+++..+|.++++++. +++|+|+++|+||+||++
T Consensus 368 ~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a 447 (755)
T TIGR01647 368 TEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDT 447 (755)
T ss_pred EEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhH
Confidence 66655 2444 3469998874432110 1123456678999999886 348999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------eEEeccCHhHHHHHH
Q 001837 529 AEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------VVHSELLPEDKAKII 580 (1007)
Q Consensus 529 ~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------~V~ar~sPeqK~~iV 580 (1007)
+++|++|+++||+++|+|||++.||.++|+++||... .||||++|+||.++|
T Consensus 448 ~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV 527 (755)
T TIGR01647 448 KETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIV 527 (755)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHH
Confidence 9999999999999999999999999999999999741 299999999999999
Q ss_pred HHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 581 NQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIAT 659 (1007)
Q Consensus 581 ~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ 659 (1007)
+.||+.| +|+|+|||+||+|||++|||||||| +|+++|+++||+||++++|..|+.++++||++|+++++|+.|.++.
T Consensus 528 ~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~ 606 (755)
T TIGR01647 528 EILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAE 606 (755)
T ss_pred HHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999 8999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-----hh-----HHHHHHHHHHHHHHHHHHHhh
Q 001837 660 KAGIIALALG-----GH-----PLVWAAVLADVGTCLIVILNS 692 (1007)
Q Consensus 660 ni~~i~la~~-----g~-----~~~~~ail~~~~s~l~vvlNS 692 (1007)
|+..+++.++ ++ +.+|++++.|. +++.+.+..
T Consensus 607 n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~-~~~~l~~~~ 648 (755)
T TIGR01647 607 TIRIVFFFGLLILILNFYFPPIMVVIIAILNDG-TIMTIAYDN 648 (755)
T ss_pred cHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhH-hHhhccCCC
Confidence 9864432222 21 23466666553 344444444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=830.57 Aligned_cols=531 Identities=36% Similarity=0.581 Sum_probs=494.7
Q ss_pred chHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhhh-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 124 GIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMN-----------------DYIEAGIIVFLFTIAEWLESRASHKATA 186 (1007)
Q Consensus 124 ~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~-----------------~y~~a~~Il~l~~i~~~le~~~~~k~~~ 186 (1007)
+++||+++||+.+++++++||+|++++++++++++ +|.++.++++++++++|+|.++++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999998863 2344567788999999999999999999
Q ss_pred HHHHhhccCCcceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeec
Q 001837 187 VMSSLMSIAPQKAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAG 263 (1007)
Q Consensus 187 ~l~~L~~~~p~~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aG 263 (1007)
.+++|+++.|.+++++|+ | ++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd~V~aG 160 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAG 160 (562)
T ss_pred HHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCCEEEee
Confidence 999999999999998875 4 7899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHh
Q 001837 264 TINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLAL 343 (1007)
Q Consensus 264 T~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al 343 (1007)
|++.+|.++++|+++|.+|.+++|.+++++++.+++++++.+++++++|+|++++++++++++|+ .++.+++
T Consensus 161 t~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~--------~~~~~~~ 232 (562)
T TIGR01511 161 TVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL--------FALEFAV 232 (562)
T ss_pred eEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888877653 3688999
Q ss_pred hhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHH
Q 001837 344 VVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLY 423 (1007)
Q Consensus 344 ~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~ 423 (1007)
++|+++|||+|++++|+++..++.+++++||++|++.++|+|+++|+||||||||||+|+|+|.++.+.++ .+.++++.
T Consensus 233 svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-~~~~~~l~ 311 (562)
T TIGR01511 233 TVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD-RDRTELLA 311 (562)
T ss_pred HHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653 56788999
Q ss_pred HHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECCEEEEEecHHHHHHhCCCCCCCcCCcCCCCC
Q 001837 424 WVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGN 503 (1007)
Q Consensus 424 ~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~~~~~~~~~~g~ 503 (1007)
+++++|..+.||+++||++++++.++.. ..+.++++++|.|+.+.++|+++.+|+++++.+.+.. ......+|.
T Consensus 312 ~aa~~e~~s~HPia~Ai~~~~~~~~~~~--~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~----~~~~~~~g~ 385 (562)
T TIGR01511 312 LAAALEAGSEHPLAKAIVSYAKEKGITL--VEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIK----IDGKAEQGS 385 (562)
T ss_pred HHHHHhccCCChHHHHHHHHHHhcCCCc--CCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCC----CChhhhCCC
Confidence 9999999999999999999998877643 3467888999999999999999999999998776544 123446788
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHH
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQF 583 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~L 583 (1007)
++++++.|++++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++||+ +|+++.|++|.++++.+
T Consensus 386 ~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l 462 (562)
T TIGR01511 386 TSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEVLPDDKAALIKEL 462 (562)
T ss_pred EEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred hhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 584 KQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 584 q~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
++.+ .|+|||||.||++|+++|||||+|| .+++.+++.||++++++++..|+.+++++|+++++++||+.|+++||++
T Consensus 463 ~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~ 541 (562)
T TIGR01511 463 QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVI 541 (562)
T ss_pred HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 8999999999999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHH
Q 001837 663 IIALALGGHPL 673 (1007)
Q Consensus 663 ~i~la~~g~~~ 673 (1007)
+++++++|+.+
T Consensus 542 ~i~la~~~~~~ 552 (562)
T TIGR01511 542 AIPIAAGVLYP 552 (562)
T ss_pred HHHHHHhhhhc
Confidence 99999876643
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=818.78 Aligned_cols=532 Identities=42% Similarity=0.708 Sum_probs=502.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEE
Q 001837 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLA 220 (1007)
Q Consensus 143 i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~ 220 (1007)
+|+|++++++.++++++|+++.+++++++++.+++.++++|+.+.+++|.++.|.+++|+|+| ++|++++|+|||+|.
T Consensus 1 ~~~l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~ 80 (536)
T TIGR01512 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVV 80 (536)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEE
Confidence 478899999999999999999999999999999999999999999999999999999999998 799999999999999
Q ss_pred EeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchH
Q 001837 221 VKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSR 300 (1007)
Q Consensus 221 L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~ 300 (1007)
|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|++.+++.+++.++++
T Consensus 81 v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 81 VKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred EcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchh
Q 001837 301 IQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGD 380 (1007)
Q Consensus 301 lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~ 380 (1007)
+++.++++++++++++++++++++++++++.. +..++.+++++++++|||+|++++|+++..++.+++++||++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~ 238 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGA 238 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcH
Confidence 99999999999999999999888887766542 2347888999999999999999999999999999999999999999
Q ss_pred hhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccce
Q 001837 381 YLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQ 460 (1007)
Q Consensus 381 ~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~ 460 (1007)
++|+++++|++|||||||||+|+|+|.++.+ .+++.+++++|..+.||+++||++++++.+ ..++++
T Consensus 239 ~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~ 305 (536)
T TIGR01512 239 ALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------AEVLRLAAAAEQASSHPLARAIVDYARKRE------NVESVE 305 (536)
T ss_pred HHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------HHHHHHHHHHhccCCCcHHHHHHHHHHhcC------CCcceE
Confidence 9999999999999999999999999999875 368888899999999999999999998764 355678
Q ss_pred eccCCceEEEECCEEEEEecHHHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCC
Q 001837 461 NFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540 (1007)
Q Consensus 461 ~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI 540 (1007)
+.++.|+.+.++|.++.+|+++++.+.+.. .+..+|.+++++++|+.++|.+.++|++||+++++|++|+++|+
T Consensus 306 ~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi 379 (536)
T TIGR01512 306 EVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGI 379 (536)
T ss_pred EecCCeEEEEECCeEEEEcCHHHHhhcCCc------chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCC
Confidence 889999999999999999999998655432 34456788999999999999999999999999999999999999
Q ss_pred -eEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHH
Q 001837 541 -RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSAL 618 (1007)
Q Consensus 541 -kv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~ 618 (1007)
+++|+|||+..++..+++++|++ .+|+++.|++|..+++.+++.+ .|+|||||.||++|+++||+||++|..+++.
T Consensus 380 ~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 380 EKVVMLTGDRRAVAERVARELGID--EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred CcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 99999999999999999999998 9999999999999999999988 8999999999999999999999999668899
Q ss_pred HHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 001837 619 ATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697 (1007)
Q Consensus 619 A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~ 697 (1007)
+++.||++++++++..|.+++.+||++++++++|+.|+++||+++++++++|+++||.|.+.+.++++++++||+|+++
T Consensus 458 ~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~ss~~v~~ns~r~~~ 536 (536)
T TIGR01512 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVILNALRLLR 536 (536)
T ss_pred HHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcChHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999863
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-88 Score=812.29 Aligned_cols=544 Identities=42% Similarity=0.678 Sum_probs=505.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC---EEeeCCCcccCcEE
Q 001837 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG---EEVDAGEVKLNTVL 219 (1007)
Q Consensus 143 i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg---~~V~~~dLv~GDIV 219 (1007)
||+|+.++++.+++++.|.++.+++++++++.+++.++++|+++.+++|.+..|..++++|+| ++|++++|+|||+|
T Consensus 1 ~d~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv 80 (556)
T TIGR01525 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIV 80 (556)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEE
Confidence 578999999999999999999999999999999999999999999999999999999999984 68999999999999
Q ss_pred EEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccch
Q 001837 220 AVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299 (1007)
Q Consensus 220 ~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks 299 (1007)
+|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|+|.+++.+++.+++
T Consensus 81 ~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 81 IVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred EECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccch
Q 001837 300 RIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGG 379 (1007)
Q Consensus 300 ~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~ 379 (1007)
++++.++++++++++++++++++++++|++.... ..+.+++++++++|||+|++++|+++..++.+++++|+++|++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~---~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~ 237 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL---GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGG 237 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCc
Confidence 9999999999999999999999998887765532 6788999999999999999999999999999999999999999
Q ss_pred hhhhhccCccEEEecCccccccCceEEEEeecCCCCC-CHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcc-
Q 001837 380 DYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI-NLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVE- 457 (1007)
Q Consensus 380 ~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~-~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~- 457 (1007)
+++|+|+++|++|||||||||+|+|+|.++...++.. +.++++.++++++..+.||+++||++++++.+++... .
T Consensus 238 ~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~---~~ 314 (556)
T TIGR01525 238 DALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK---QE 314 (556)
T ss_pred hHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCccc---cc
Confidence 9999999999999999999999999999998664322 2677888899999999999999999999987765422 3
Q ss_pred cceeccCCceEEEECC-EEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHH
Q 001837 458 DYQNFPGEGIYGKIGG-EEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVN 533 (1007)
Q Consensus 458 ~~~~~~g~Gi~~~i~g-~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~ 533 (1007)
+++++++.|+.+.++| .++.+|++++++....... ...+.+..+|.++++++.|++++|.+.++|++||+++++|+
T Consensus 315 ~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~ 394 (556)
T TIGR01525 315 DVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIA 394 (556)
T ss_pred CeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHH
Confidence 6677899999999999 8999999998733222210 11233456789999999999999999999999999999999
Q ss_pred HHHHCC-CeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 534 QLKSLG-IRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 534 ~Lr~aG-Ikv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
+|+++| ++++|+|||+..++..+++++|+. .+|+++.|++|.++++.+++.| .|+|||||.||++|+++|||||++
T Consensus 395 ~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 472 (556)
T TIGR01525 395 ALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM 472 (556)
T ss_pred HHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe
Confidence 999999 999999999999999999999998 9999999999999999999887 899999999999999999999999
Q ss_pred CCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHH
Q 001837 612 GISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVW-AAVLADVGTCLIVIL 690 (1007)
Q Consensus 612 g~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~-~ail~~~~s~l~vvl 690 (1007)
| .+++.+++.||+++.++++..|++++++||++++++++|+.|+++||+++++++++|+.+|| .+.+.|.++++++++
T Consensus 473 g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~~ss~~v~l 551 (556)
T TIGR01525 473 G-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHEGSTVLVVL 551 (556)
T ss_pred C-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhchHHHHHH
Confidence 9 78999999999999999999999999999999999999999999999999999999999997 999999999999999
Q ss_pred hhhhh
Q 001837 691 NSMLL 695 (1007)
Q Consensus 691 NSlrl 695 (1007)
||+|+
T Consensus 552 ns~r~ 556 (556)
T TIGR01525 552 NSLRL 556 (556)
T ss_pred HhhcC
Confidence 99985
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-88 Score=841.55 Aligned_cols=576 Identities=21% Similarity=0.280 Sum_probs=472.7
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHH
Q 001837 74 EANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIG 153 (1007)
Q Consensus 74 ~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~ 153 (1007)
..+...+|+|....+.+.+++.. ++..|.+|+.|+++++.++
T Consensus 74 ~~r~~~~G~N~l~~~~~~s~~~~--------~~~~~~~p~~~lL~~aa~l------------------------------ 115 (902)
T PRK10517 74 ESAREQHGENELPAQKPLPWWVH--------LWVCYRNPFNILLTILGAI------------------------------ 115 (902)
T ss_pred HHHHHhcCCCCCCCCCCCCHHHH--------HHHHHHhHHHHHHHHHHHH------------------------------
Confidence 34566789998877766665532 4566677777655443322
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC------C--EEeeCCCcccCcEEEEeCCC
Q 001837 154 TIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT------G--EEVDAGEVKLNTVLAVKAGE 225 (1007)
Q Consensus 154 ~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd------g--~~V~~~dLv~GDIV~L~~Ge 225 (1007)
++++++|.++++|+++++++.+++.++++|+++.+++|.++.+.+++|+|+ | ++|+++||||||+|.|++||
T Consensus 116 s~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd 195 (902)
T PRK10517 116 SYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD 195 (902)
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC
Confidence 334578889999999999999999999999999999999999999999998 5 68999999999999999999
Q ss_pred cccccEEEEece-eeeecccCCCCCeeeEecCCC-------------eeeeceEEeeeeEEEEEEEEecceEEehhHHHH
Q 001837 226 VIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS-------------TVWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291 (1007)
Q Consensus 226 ~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv 291 (1007)
+|||||+|++|+ +.||||+|||||.|+.|.+++ .||+||.|.+|.++++|++||.+|.+|+|.+++
T Consensus 196 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v 275 (902)
T PRK10517 196 MIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275 (902)
T ss_pred EEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHh
Confidence 999999999996 799999999999999998764 799999999999999999999999999999999
Q ss_pred HHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHH
Q 001837 292 EEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAAT 371 (1007)
Q Consensus 292 ~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak 371 (1007)
.+++.+++|+|+.++++++++.+++++++.++++++++.. .++...+.+++++++++|||+||++++++++.++.+|++
T Consensus 276 ~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak 354 (902)
T PRK10517 276 SEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-GDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSK 354 (902)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHh
Confidence 9988899999999999999999888888877776655443 467778889999999999999999999999999999999
Q ss_pred cCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHh---hhhcCCChHHHHHHHHhhhCC
Q 001837 372 SGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS---IESKSSHPMSAALVEYGRSLS 448 (1007)
Q Consensus 372 ~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~as---le~~s~hPi~~AIv~~a~~~~ 448 (1007)
+|+++|+++++|+||++|+||||||||||+|+|+|..+..... .+.++++.+++. .+...+||++.|+++++...+
T Consensus 355 ~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~ 433 (902)
T PRK10517 355 QKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-KTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEES 433 (902)
T ss_pred CCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC-CCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999998754322 344566665543 223468999999999986543
Q ss_pred CCCCCCCcccceecc----CCceEEEE---CC--EEEEEecHHHHHHhCCC------CCC-----------CcCCcCCCC
Q 001837 449 IEPKPEDVEDYQNFP----GEGIYGKI---GG--EEIYIGNRKIAQRAGCG------TVP-----------SVDGPKMKG 502 (1007)
Q Consensus 449 i~~~~~~~~~~~~~~----g~Gi~~~i---~g--~~i~ig~~~~~~~~~~~------~~~-----------~~~~~~~~g 502 (1007)
............++| .+++...+ ++ ..+..|.++.+...... ..+ ..+++..+|
T Consensus 434 ~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 513 (902)
T PRK10517 434 ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQG 513 (902)
T ss_pred hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcC
Confidence 111111222222333 23344333 22 23445777654321100 000 023355678
Q ss_pred CeEEEEEE----------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-
Q 001837 503 NTIGYIFS----------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN- 565 (1007)
Q Consensus 503 ~~~i~v~~----------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~- 565 (1007)
.+++.++. |++|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||..+
T Consensus 514 ~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~ 593 (902)
T PRK10517 514 LRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE 593 (902)
T ss_pred CEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC
Confidence 88888763 6799999999999999999999999999999999999999999999999999632
Q ss_pred ----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 566 ----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 566 ----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
.||||++|+||.++|+.||+.| +|+|+|||+||+|||++|||||||| +|+++|+++
T Consensus 594 v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkea 672 (902)
T PRK10517 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREA 672 (902)
T ss_pred ceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHh
Confidence 7999999999999999999999 8999999999999999999999999 999999999
Q ss_pred cCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----h------hHHHHHHHHHHHHHHHHHHHh
Q 001837 623 GQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG-----G------HPLVWAAVLADVGTCLIVILN 691 (1007)
Q Consensus 623 ADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~-----g------~~~~~~ail~~~~s~l~vvlN 691 (1007)
||+||+++||..|+.++++||++|+|+++++.|.+..|+..++..++ . .+.+|+++++| ++++.+...
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d 751 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFD 751 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCC
Confidence 99999999999999999999999999999999999999864332222 1 23578888888 555555543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-87 Score=839.58 Aligned_cols=587 Identities=20% Similarity=0.285 Sum_probs=472.1
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+.+.+...+|+|....+.+.+++. .|+..|.+|+.|+++++.+++++- ..|....++
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~~--------~~l~~f~~~~~~iL~~aa~ls~~~---~~~~~~~~~------------ 106 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHALV--------QLLQAFNNPFIYVLMVLAAISFFT---DYWLPLRRG------------ 106 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHHH--------HHHHHHHhHHHHHHHHHHHHHHHH---HHHhhccCC------------
Confidence 334556778999887666555543 245666777777666554443211 000000000
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC------C--EEeeCCCcccCcEEEEeC
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT------G--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd------g--~~V~~~dLv~GDIV~L~~ 223 (1007)
-.++|.++++|+++++++.+++.++++++++.+++|.++.+..++|+|+ | ++|++++|+|||+|.|++
T Consensus 107 ----~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 107 ----EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred ----ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 0135788888999999999999999999999999999999999999998 3 789999999999999999
Q ss_pred CCcccccEEEEece-eeeecccCCCCCeeeEecC-----------------------CCeeeeceEEeeeeEEEEEEEEe
Q 001837 224 GEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQK-----------------------GSTVWAGTINLNGYISVETTAVA 279 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~-----------------------g~~V~aGT~v~~G~~~~~V~~tG 279 (1007)
||+|||||+|++|. +.||||+|||||.|+.|.+ +|.||+||.|.+|.++++|++||
T Consensus 183 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG 262 (903)
T PRK15122 183 GDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262 (903)
T ss_pred CCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEec
Confidence 99999999999997 6999999999999999975 37899999999999999999999
Q ss_pred cceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHH
Q 001837 280 EDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTP 359 (1007)
Q Consensus 280 ~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~ 359 (1007)
.+|.+|+|.+++.+ +..++++++.++++.+++..+.++++.+++++.++.. .++..++.+++++++++|||+||++++
T Consensus 263 ~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-~~~~~~l~~aisl~V~~~Pe~Lp~~vt 340 (903)
T PRK15122 263 SRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-GDWLEALLFALAVAVGLTPEMLPMIVS 340 (903)
T ss_pred cccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CCHHHHHHHHHHHHHHHccchHHHHHH
Confidence 99999999999887 6667899999999999887776666655555443333 467778899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHh---hhhcCCChH
Q 001837 360 VVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS---IESKSSHPM 436 (1007)
Q Consensus 360 la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~as---le~~s~hPi 436 (1007)
++++.++.+|+++|+++|++.++|+||++|+||||||||||+|+|+|.+++..++ .+.++++.+++. .+..++||+
T Consensus 341 ~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~~~~~~l~~a~l~s~~~~~~~~p~ 419 (903)
T PRK15122 341 SNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-RKDERVLQLAWLNSFHQSGMKNLM 419 (903)
T ss_pred HHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-CChHHHHHHHHHhCCCCCCCCChH
Confidence 9999999999999999999999999999999999999999999999999876543 334556665432 234468999
Q ss_pred HHHHHHHhhhCCCCCCCCCcccceeccCCceEEEE-------CCEEEEE--ecHHHHHHhCC-------C-CCC------
Q 001837 437 SAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKI-------GGEEIYI--GNRKIAQRAGC-------G-TVP------ 493 (1007)
Q Consensus 437 ~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i-------~g~~i~i--g~~~~~~~~~~-------~-~~~------ 493 (1007)
+.||++++...+............++|+.+..... +++.+.+ |+++.+..... . .+.
T Consensus 420 e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 420 DQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred HHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 99999999876643212233455666776654332 4554444 88775422110 0 000
Q ss_pred ---CcCCcCCCCCeEEEEEE------------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHH
Q 001837 494 ---SVDGPKMKGNTIGYIFS------------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSA 552 (1007)
Q Consensus 494 ---~~~~~~~~g~~~i~v~~------------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t 552 (1007)
..+++..+|.++++++. |++|+|+++|+||+||+++++|++|+++||+++|+|||++.|
T Consensus 500 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 579 (903)
T PRK15122 500 LLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579 (903)
T ss_pred HHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 12345567888887763 568999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcc-----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee
Q 001837 553 AMQAQEQLGNALN-----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 553 A~~vA~~lGI~~~-----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG 608 (1007)
|.++|+++||..+ .||||++|+||.++|+.||+.| +|+|+|||+||+|||++||||
T Consensus 580 A~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG 659 (903)
T PRK15122 580 TAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG 659 (903)
T ss_pred HHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE
Confidence 9999999999621 6999999999999999999999 899999999999999999999
Q ss_pred EEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh------hHHHHHH
Q 001837 609 ISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL-----GG------HPLVWAA 677 (1007)
Q Consensus 609 IAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~-----~g------~~~~~~a 677 (1007)
|||| +|+++|+++||+||+++||..|+.++++||++|+|+++++.|.+..|+..+++.+ ++ .+.+|.+
T Consensus 660 IAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~n 738 (903)
T PRK15122 660 ISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQN 738 (903)
T ss_pred EEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 9999 8999999999999999999999999999999999999999999999875332222 11 1356777
Q ss_pred HHHHHHHHHHHHH
Q 001837 678 VLADVGTCLIVIL 690 (1007)
Q Consensus 678 il~~~~s~l~vvl 690 (1007)
+++|. +++.+..
T Consensus 739 li~D~-~~lal~~ 750 (903)
T PRK15122 739 LMYDI-SQLSLPW 750 (903)
T ss_pred HHHHH-HHHhhcC
Confidence 77773 5555444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=837.97 Aligned_cols=576 Identities=19% Similarity=0.258 Sum_probs=471.1
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+...+...+|+|....+.+.+++.. ++..|.+|+.|+++++.++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~~~--------~~~~~~~p~~~iL~~~a~l---------------------------- 81 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNLRL--------LIRAFNNPFIYILAMLMGV---------------------------- 81 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHHHH--------HHHHHhhHHHHHHHHHHHH----------------------------
Confidence 3344566788888776655544432 4555667777665444333
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEec------CC--EEeeCCCcccCcEEEEeC
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAG------TG--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~r------dg--~~V~~~dLv~GDIV~L~~ 223 (1007)
++++++|+++++|+++++++.+++.++++|+++.+++|.++.+..++|+| || ++|+++||+|||+|.|++
T Consensus 82 --s~~~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~ 159 (867)
T TIGR01524 82 --SYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAA 159 (867)
T ss_pred --HHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECC
Confidence 23346788899999999999999999999999999999999999999999 78 799999999999999999
Q ss_pred CCcccccEEEEece-eeeecccCCCCCeeeEecCCC-------------eeeeceEEeeeeEEEEEEEEecceEEehhHH
Q 001837 224 GEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS-------------TVWAGTINLNGYISVETTAVAEDCVVAKMAK 289 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~ 289 (1007)
||+|||||+|++|+ +.||||+|||||.|+.|.+++ .+|+||.|.+|.++++|++||.+|.+|+|.+
T Consensus 160 Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 160 GDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred CCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 99999999999997 799999999999999998864 6999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHH
Q 001837 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKA 369 (1007)
Q Consensus 290 lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~l 369 (1007)
++.+ +.+++|+|+.++++++++.++++++++++++++++.. .++..++.++++++++++||+||++++++++.++.+|
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 9988 6778999999999999999988888877776655443 4677788999999999999999999999999999999
Q ss_pred HHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHH---hhhhcCCChHHHHHHHHhhh
Q 001837 370 ATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS---SIESKSSHPMSAALVEYGRS 446 (1007)
Q Consensus 370 ak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~a---sle~~s~hPi~~AIv~~a~~ 446 (1007)
+++|+++|++.++|+||++|+||||||||||+|+|+|.++....+ .+.++++.+++ ..+..++||++.|+++++..
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~ 396 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-ETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDE 396 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-CCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999875432 34556666554 22334579999999999865
Q ss_pred CCCCCCCCCcccceecc----CCceEEEECC-----EEEEEecHHHHHHhCCCC--------C---------CCcCCcCC
Q 001837 447 LSIEPKPEDVEDYQNFP----GEGIYGKIGG-----EEIYIGNRKIAQRAGCGT--------V---------PSVDGPKM 500 (1007)
Q Consensus 447 ~~i~~~~~~~~~~~~~~----g~Gi~~~i~g-----~~i~ig~~~~~~~~~~~~--------~---------~~~~~~~~ 500 (1007)
...............+| .+++...+++ ..+..|.++.+....... + ...+++..
T Consensus 397 ~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~ 476 (867)
T TIGR01524 397 SAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNR 476 (867)
T ss_pred hchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHh
Confidence 42111111222233333 3555554432 235567776653211100 0 01234556
Q ss_pred CCCeEEEEEE----------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc
Q 001837 501 KGNTIGYIFS----------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL 564 (1007)
Q Consensus 501 ~g~~~i~v~~----------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~ 564 (1007)
+|.+++.++. +++|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus 477 ~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~ 556 (867)
T TIGR01524 477 QGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556 (867)
T ss_pred cCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 7888888775 358999999999999999999999999999999999999999999999999973
Q ss_pred c-----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 565 N-----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 565 ~-----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
+ .||||++|+||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+++|+
T Consensus 557 ~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk 635 (867)
T TIGR01524 557 NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAK 635 (867)
T ss_pred CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHH
Confidence 2 7999999999999999999999 8999999999999999999999999 8999999
Q ss_pred hhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHH
Q 001837 621 ETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG-----------HPLVWAAVLADVGTCLIVI 689 (1007)
Q Consensus 621 ~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g-----------~~~~~~ail~~~~s~l~vv 689 (1007)
++||+||++++|..|+.++++||++++|+++|+.|.+..|+..++..+++ ++.+|+++++| ++++.+.
T Consensus 636 ~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~ 714 (867)
T TIGR01524 636 EASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLP 714 (867)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhc
Confidence 99999999999999999999999999999999999998887643322221 13467887777 5665554
Q ss_pred H
Q 001837 690 L 690 (1007)
Q Consensus 690 l 690 (1007)
.
T Consensus 715 ~ 715 (867)
T TIGR01524 715 W 715 (867)
T ss_pred C
Confidence 4
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-85 Score=787.96 Aligned_cols=487 Identities=28% Similarity=0.404 Sum_probs=415.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-ceE-EecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 166 IVFLFTIAEWLESRASHKATAVMSSLMSIAPQ-KAI-IAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 166 Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~-V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++..+++.|+|.++++|+++.+++|+++.|. +++ |.||| ++|++++|+|||+|+|++||+|||||+|++|.+.||
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~~VD 151 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLATVD 151 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcceEEe
Confidence 34445679999999999999999999999886 675 67888 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCC---CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHH
Q 001837 242 EKTLTGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIF 318 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g---~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ 318 (1007)
||+|||||.|+.|++| +.||+||.|.+|.+.++|+++|.+|++|||.+++++++.+++|+|.....+...++ +++
T Consensus 152 ESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~--ii~ 229 (673)
T PRK14010 152 ESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT--IIF 229 (673)
T ss_pred cchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh--HHH
Confidence 9999999999999999 88999999999999999999999999999999999999999999976655543322 222
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccc
Q 001837 319 ISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGT 398 (1007)
Q Consensus 319 ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGT 398 (1007)
++++++++++. .+.++...+.+++++++.++||+|+..+|++...++.+|+++|+++|+++++|+||++|+||||||||
T Consensus 230 l~~~~~~~~~~-~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGT 308 (673)
T PRK14010 230 LVVILTMYPLA-KFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGT 308 (673)
T ss_pred HHHHHHHHHHH-hhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCc
Confidence 22222221111 11233445667778888889999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceecc----CCceEEEECCE
Q 001837 399 ITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFP----GEGIYGKIGGE 474 (1007)
Q Consensus 399 LT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~----g~Gi~~~i~g~ 474 (1007)
||+|++.+.++.+.++ .+.++++.++...+..+.||+++||++++++.+++.. ....++..+. +.|+ .++++
T Consensus 309 LT~Gn~~~~~~~~~~~-~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~~~-~~~~~~~pF~~~~k~~gv--~~~g~ 384 (673)
T PRK14010 309 ITYGNRMADAFIPVKS-SSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLP-QEVGEYIPFTAETRMSGV--KFTTR 384 (673)
T ss_pred CCCCCeEEEEEEeCCC-ccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCCch-hhhcceeccccccceeEE--EECCE
Confidence 9999988888776533 4556788887788888999999999999987765421 1112222222 3344 36788
Q ss_pred EEEEecHHHHHHh----CCCCCC----CcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEc
Q 001837 475 EIYIGNRKIAQRA----GCGTVP----SVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546 (1007)
Q Consensus 475 ~i~ig~~~~~~~~----~~~~~~----~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlT 546 (1007)
.+..|+++++... +..... ..+++..+|.+++++..|++++|++.|+||+|||++++|++||++||+++|+|
T Consensus 385 ~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT 464 (673)
T PRK14010 385 EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT 464 (673)
T ss_pred EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC
Confidence 8999999886321 111101 12345667889999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCE
Q 001837 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQV 625 (1007)
Q Consensus 547 GD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADi 625 (1007)
||++.||.++|+++||+ .+|||++||||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+++|+++||+
T Consensus 465 GDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 465 GDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred CCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 99999999999999999 8999999999999999999999 8999999999999999999999999 999999999999
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 626 ILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 626 VLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
||+++||..|++++++||++|.|+++.+.|+++.|+.
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 9999999999999999999999999999999999885
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-85 Score=828.03 Aligned_cols=603 Identities=20% Similarity=0.275 Sum_probs=463.1
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHH
Q 001837 73 FEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVI 152 (1007)
Q Consensus 73 y~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~ 152 (1007)
...+...+|+|....+.+.+++.. ++..|.+|+.|+++++.+++++-- .+. .+. .
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~~~--------~~~~f~~~~~~~l~~~ails~~~~------~~~---~~~--------~ 120 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFLQI--------VWAALSDQTLILLSVAAVVSLVLG------LPE---PGE--------G 120 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHH--------HHHHHhCHHHHHHHHHHHHHHHHh------hcc---ccc--------c
Confidence 334566789998877666665432 455566777666554444332100 000 000 0
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 153 GTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSI-APQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 153 ~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~-~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
-.-....|++++++++++++...+..++++++++.+++|.+. .+.+++|+||| ++|+++||+|||+|.|++||+|||
T Consensus 121 ~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 121 KADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred cCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecc
Confidence 000012567777766666666666677777777777777653 46789999999 799999999999999999999999
Q ss_pred cEEEEec-eeeeecccCCCCCeeeEecCCCe--eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHH
Q 001837 230 DGIVVDG-KCEVDEKTLTGESYPVSKQKGST--VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306 (1007)
Q Consensus 230 DgiVl~G-~~~VDES~LTGES~Pv~K~~g~~--V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~ 306 (1007)
||+|++| ++.||||+|||||.|+.|.+++. ||+||.|.+|.+.++|++||.+|.+|||.+++.+++ +++|+++.++
T Consensus 201 D~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~ 279 (941)
T TIGR01517 201 DGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLS 279 (941)
T ss_pred cEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHH
Confidence 9999999 79999999999999999988765 999999999999999999999999999999988765 5679999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHH---hc---C---------CchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHH
Q 001837 307 KFSQYYTPAVIFISACVAVIPIA---LG---V---------SNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAAT 371 (1007)
Q Consensus 307 ~i~~~~~~i~l~ia~l~~l~~~~---~~---~---------~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak 371 (1007)
++++++.++++++++++++++++ +. . .++...+.+++++++++|||+|++++|++++.++.+|++
T Consensus 280 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 280 ELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 99999999888877777665532 11 0 134456788999999999999999999999999999999
Q ss_pred cCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCC-----------HHHHHHHHHhhh-----------
Q 001837 372 SGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN-----------LNTLLYWVSSIE----------- 429 (1007)
Q Consensus 372 ~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~-----------~~~lL~~~asle----------- 429 (1007)
+|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.++ ..+++..+..+.
T Consensus 360 ~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~ 439 (941)
T TIGR01517 360 DNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGG 439 (941)
T ss_pred CCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCC
Confidence 9999999999999999999999999999999999999875432111 112232222211
Q ss_pred --hcCCChHHHHHHHHhhhCCCCCCC-----CC--ccccee-ccCCceEEEECCE---EEEEecHHHHHHh--------C
Q 001837 430 --SKSSHPMSAALVEYGRSLSIEPKP-----ED--VEDYQN-FPGEGIYGKIGGE---EIYIGNRKIAQRA--------G 488 (1007)
Q Consensus 430 --~~s~hPi~~AIv~~a~~~~i~~~~-----~~--~~~~~~-~~g~Gi~~~i~g~---~i~ig~~~~~~~~--------~ 488 (1007)
...++|++.||++++.+.+.+... .. ...|.. ..+.++....++. .+.-|.++.+... +
T Consensus 440 ~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g 519 (941)
T TIGR01517 440 KRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNG 519 (941)
T ss_pred ccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCC
Confidence 124689999999999876543210 00 111111 1233444444332 2334666543211 1
Q ss_pred CCC-C--------CCcCCcCCCCCeEEEEE----------------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEE
Q 001837 489 CGT-V--------PSVDGPKMKGNTIGYIF----------------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTA 543 (1007)
Q Consensus 489 ~~~-~--------~~~~~~~~~g~~~i~v~----------------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~ 543 (1007)
... . ...+++..+|.+++.++ .|++|+|+++|+||+|++++++|++|+++||+++
T Consensus 520 ~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~ 599 (941)
T TIGR01517 520 EATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVR 599 (941)
T ss_pred CcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEE
Confidence 100 0 11234566788877765 3569999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhCCCcc-------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCcc
Q 001837 544 MLTGDNQSAAMQAQEQLGNALN-------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGIN 597 (1007)
Q Consensus 544 mlTGD~~~tA~~vA~~lGI~~~-------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~N 597 (1007)
|+|||++.||.++|+++||..+ .||||++|+||.++|+.||+.| +|+|||||+|
T Consensus 600 miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 600 MVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred EECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999999742 6999999999999999999999 8999999999
Q ss_pred CHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------
Q 001837 598 DAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGH------ 671 (1007)
Q Consensus 598 Da~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~------ 671 (1007)
|+|||++||||||||.+|+++|+++||+||++++|+.|+.++++||++++++++|+.|++++|+..++++++|.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999988999999999999999999999999999999999999999999999998776666542
Q ss_pred -----HHHHHHHHHHHHHHHHHHHh--hhhhcccccC
Q 001837 672 -----PLVWAAVLADVGTCLIVILN--SMLLLHETHT 701 (1007)
Q Consensus 672 -----~~~~~ail~~~~s~l~vvlN--Slrll~~~~~ 701 (1007)
+.+|++++++.++++.+... .-.+++++|+
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~ 796 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPI 796 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCC
Confidence 35788888888777777643 3334444444
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-85 Score=820.08 Aligned_cols=589 Identities=21% Similarity=0.293 Sum_probs=472.4
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHHHh-hhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHH
Q 001837 75 ANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYV-YHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIG 153 (1007)
Q Consensus 75 as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~-~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~ 153 (1007)
.+...+|+|....+.+.+++.. ++..| .+|+.++++++.++
T Consensus 32 ~r~~~~G~N~i~~~~~~s~~~~--------~l~~~~~~~~~~~L~~aa~l------------------------------ 73 (884)
T TIGR01522 32 HRRAFHGWNEFDVEEDESLWKK--------FLSQFVKNPLILLLIASAVI------------------------------ 73 (884)
T ss_pred HHHHhcCCCcCCCCCCCCHHHH--------HHHHHhhChHHHHHHHHHHH------------------------------
Confidence 4456789998876665555432 44555 56776655444333
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccE
Q 001837 154 TIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDG 231 (1007)
Q Consensus 154 ~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDg 231 (1007)
+++++.|.+++++++++++...+..++++++++.+++|.++.|.+++|+||| ++|+++||+|||+|.|++||+|||||
T Consensus 74 s~~~g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg 153 (884)
T TIGR01522 74 SVFMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADL 153 (884)
T ss_pred HHHHcchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeE
Confidence 2344667777777666666677777788888999999999999999999999 79999999999999999999999999
Q ss_pred EEEece-eeeecccCCCCCeeeEecCC--------------CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhc
Q 001837 232 IVVDGK-CEVDEKTLTGESYPVSKQKG--------------STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQN 296 (1007)
Q Consensus 232 iVl~G~-~~VDES~LTGES~Pv~K~~g--------------~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~ 296 (1007)
+|++|+ +.||||+|||||.|+.|.++ +.+|+||.|.+|.+.++|++||.+|.+|+|.+++++++.
T Consensus 154 ~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 233 (884)
T TIGR01522 154 RIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233 (884)
T ss_pred EEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCC
Confidence 999995 99999999999999999876 489999999999999999999999999999999999888
Q ss_pred cchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcc
Q 001837 297 SKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLI 376 (1007)
Q Consensus 297 ~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilv 376 (1007)
+++|+|+.++++++++++++++++++++++.|+.+ .++..++.+++++++++|||+||+++|++++.++++|+++|+++
T Consensus 234 ~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilv 312 (884)
T TIGR01522 234 PKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIV 312 (884)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 99999999999999998877766666666655543 46777889999999999999999999999999999999999999
Q ss_pred cchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC---------------------------CHHHHHHHHHhhh
Q 001837 377 KGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI---------------------------NLNTLLYWVSSIE 429 (1007)
Q Consensus 377 k~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~---------------------------~~~~lL~~~asle 429 (1007)
|++.++|+||++|+||||||||||+|+|+|.+++..++.. ...+++..++...
T Consensus 313 k~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 392 (884)
T TIGR01522 313 RKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN 392 (884)
T ss_pred cchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhC
Confidence 9999999999999999999999999999999987543211 0123343332221
Q ss_pred h---------cCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc------eEEEE--CCEE--EEEecHHHHHHh---
Q 001837 430 S---------KSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG------IYGKI--GGEE--IYIGNRKIAQRA--- 487 (1007)
Q Consensus 430 ~---------~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G------i~~~i--~g~~--i~ig~~~~~~~~--- 487 (1007)
. ..++|++.||++++...+++...........+|+.. +.... ++.. +..|.++.....
T Consensus 393 ~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 393 NAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred CCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhh
Confidence 1 125699999999998776542111233344555432 21122 3332 234666543221
Q ss_pred -----CCCC-C---------CCcCCcCCCCCeEEEEEEC-----CEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcC
Q 001837 488 -----GCGT-V---------PSVDGPKMKGNTIGYIFSG-----ASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547 (1007)
Q Consensus 488 -----~~~~-~---------~~~~~~~~~g~~~i~v~~d-----~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG 547 (1007)
+... + ...+++..+|.+++.++.+ ++|+|+++|+||+||+++++|++|+++|++++|+||
T Consensus 473 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 473 YQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred hhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 1100 0 0123456789999988864 489999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCcc-------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHH
Q 001837 548 DNQSAAMQAQEQLGNALN-------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPA 601 (1007)
Q Consensus 548 D~~~tA~~vA~~lGI~~~-------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~A 601 (1007)
|++.||.++|+++||... .||||++|+||.++|+.||+.| .|+|||||+||+||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pA 632 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPA 632 (884)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHH
Confidence 999999999999999732 5999999999999999999999 99999999999999
Q ss_pred HhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hh------
Q 001837 602 LATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----GH------ 671 (1007)
Q Consensus 602 Lk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g~------ 671 (1007)
|++|||||+||.+|+++++++||++|++++|..|+.++++||++++++++|+.|.++.|+..+++.++ +.
T Consensus 633 l~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~ 712 (884)
T TIGR01522 633 LKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNA 712 (884)
T ss_pred HHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH
Confidence 99999999999779999999999999999999999999999999999999999999999876644432 22
Q ss_pred -HHHHHHHHHHHHHHHHHHHh--hhhhcccccCC
Q 001837 672 -PLVWAAVLADVGTCLIVILN--SMLLLHETHTH 702 (1007)
Q Consensus 672 -~~~~~ail~~~~s~l~vvlN--Slrll~~~~~~ 702 (1007)
+.+|++++++.++++.+... +-.+++++|+.
T Consensus 713 ~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~ 746 (884)
T TIGR01522 713 MQILWINILMDGPPAQSLGVEPVDKDVMRKPPRP 746 (884)
T ss_pred HHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCC
Confidence 45788888888877666552 33344444443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=774.15 Aligned_cols=490 Identities=27% Similarity=0.365 Sum_probs=420.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-ceEEecCC---EEeeCCCcccCcEEEEeCCCcccccEEEEece
Q 001837 162 EAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQ-KAIIAGTG---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237 (1007)
Q Consensus 162 ~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~V~rdg---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~ 237 (1007)
.++++++.++++.|+|.++++|+++.+++|+++.|. +++|+|+| ++|++++|++||+|+|++||+|||||+|++|.
T Consensus 68 i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~ 147 (679)
T PRK01122 68 ITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc
Confidence 334455666889999999999999999999999886 68888875 68999999999999999999999999999999
Q ss_pred eeeecccCCCCCeeeEecCCCe---eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhH
Q 001837 238 CEVDEKTLTGESYPVSKQKGST---VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTP 314 (1007)
Q Consensus 238 ~~VDES~LTGES~Pv~K~~g~~---V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~ 314 (1007)
+.||||+|||||.|+.|++|+. ||+||.|.+|.+.++|+++|.+|+++||.+++++++.+++|+|..++.+..+++.
T Consensus 148 a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~ 227 (679)
T PRK01122 148 ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTI 227 (679)
T ss_pred EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhH
Confidence 9999999999999999999988 9999999999999999999999999999999999999999999988888877766
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEec
Q 001837 315 AVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFD 394 (1007)
Q Consensus 315 i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fD 394 (1007)
+++++.++++.+.|+.+ . ...+.+++++++++|||+|+..+|+....++.+|+++|+++|+++++|+||++|+||||
T Consensus 228 i~l~~~~~~~~~~~~~g-~--~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~D 304 (679)
T PRK01122 228 IFLLVVATLPPFAAYSG-G--ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLD 304 (679)
T ss_pred HHHHHHHHHHHHHHHhC-c--hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEe
Confidence 55554444433333332 1 23678889999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhh-CCCCCCCC--CcccceeccC-CceEEE
Q 001837 395 KTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRS-LSIEPKPE--DVEDYQNFPG-EGIYGK 470 (1007)
Q Consensus 395 KTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~-~~i~~~~~--~~~~~~~~~g-~Gi~~~ 470 (1007)
||||||+|+|.+.++++.+. .+.++++..++..+..+.||.++||++++++ .+...... ...++..+.. .++.+.
T Consensus 305 KTGTLT~g~~~v~~~~~~~~-~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv 383 (679)
T PRK01122 305 KTGTITLGNRQASEFLPVPG-VTEEELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGV 383 (679)
T ss_pred CCCCCcCCcEEEEEEEeCCC-CCHHHHHHHHHHhcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEE
Confidence 99999999999999987543 5667788888888888999999999999876 34322110 0112222222 244443
Q ss_pred -ECCEEEEEecHHHHH----HhCCCCC----CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCe
Q 001837 471 -IGGEEIYIGNRKIAQ----RAGCGTV----PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIR 541 (1007)
Q Consensus 471 -i~g~~i~ig~~~~~~----~~~~~~~----~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk 541 (1007)
++|+.+..|+++.+. +.+.... ...+++..+|.++++++.|++++|++.|+|++|||++++|++||++||+
T Consensus 384 ~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~ 463 (679)
T PRK01122 384 DLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIK 463 (679)
T ss_pred EECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCe
Confidence 678899999987542 2222210 1123456789999999999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 542 TAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 542 v~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
++|+|||++.||.++|+++||+ .+|||++||||.++|+.||+.| .|+|+|||+||+|||++|||||||| +|+++|+
T Consensus 464 vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAk 540 (679)
T PRK01122 464 TVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAK 540 (679)
T ss_pred EEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHH
Confidence 9999999999999999999999 9999999999999999999999 8999999999999999999999999 9999999
Q ss_pred hhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 621 ETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658 (1007)
Q Consensus 621 ~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~ 658 (1007)
++||+||+++||..|++++++||++.-+-..-..|+++
T Consensus 541 eAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 541 EAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 99999999999999999999999998555444566665
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-85 Score=760.22 Aligned_cols=555 Identities=23% Similarity=0.349 Sum_probs=445.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcc
Q 001837 150 AVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVI 227 (1007)
Q Consensus 150 a~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~V 227 (1007)
+++++|.+.+|.++++|.+++.++.....++++++++.+++|+++.|..+.|+|+| +.+++.+|||||||.|+-||+|
T Consensus 68 sA~ISfvl~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 68 SAAISFVLADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred HHHHHHHHHhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCcc
Confidence 33445667778888888888888888888889999999999999999999999999 8999999999999999999999
Q ss_pred cccEEEEece-eeeecccCCCCCeeeEecC--------------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHH
Q 001837 228 PIDGIVVDGK-CEVDEKTLTGESYPVSKQK--------------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVE 292 (1007)
Q Consensus 228 PaDgiVl~G~-~~VDES~LTGES~Pv~K~~--------------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~ 292 (1007)
|||.+|++-. +.||||+|||||.|+.|.. .+++|+||.|..|.++++|+.||.+|.+|++.+.+.
T Consensus 148 PADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~ 227 (972)
T KOG0202|consen 148 PADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQ 227 (972)
T ss_pred ccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHh
Confidence 9999999874 9999999999999999932 478999999999999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHH--HHHh-----c--CCchhHHHHHHhhhhhhhccccchhhHHHHHH
Q 001837 293 EAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVI--PIAL-----G--VSNHKQWFHLALVVLVSACPCALILSTPVVTY 363 (1007)
Q Consensus 293 ~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~--~~~~-----~--~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~ 363 (1007)
+.+.+++|+|+.++.+...++-++.++.+.+.++ .|+. + +.....+|..++++.++++|++||+.+++.++
T Consensus 228 ~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 228 ATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 9999999999999999999885544444443333 3333 1 23456678899999999999999999999999
Q ss_pred HHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------C--------------
Q 001837 364 CALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------I-------------- 416 (1007)
Q Consensus 364 ~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~-------------- 416 (1007)
.+.+||++++++||.+.++|+||.+++||.|||||||+|+|.+..++..+.. +
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 9999999999999999999999999999999999999999999998754321 0
Q ss_pred ----CHH---HHHHHH-----Hhhhh-------cCCChHHHHHHHHhhhCCCCCCCCCcc-----------------cce
Q 001837 417 ----NLN---TLLYWV-----SSIES-------KSSHPMSAALVEYGRSLSIEPKPEDVE-----------------DYQ 460 (1007)
Q Consensus 417 ----~~~---~lL~~~-----asle~-------~s~hPi~~AIv~~a~~~~i~~~~~~~~-----------------~~~ 460 (1007)
..+ +++... +.+++ ..+.|.+.||..++++.++........ ...
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 011 122211 12221 147899999999999888764221111 001
Q ss_pred eccCC------ceEEE--EC--CEEEE-EecHHH-HHHhCC-------CC-----------CCCcCCcCCCCCeEEEE--
Q 001837 461 NFPGE------GIYGK--IG--GEEIY-IGNRKI-AQRAGC-------GT-----------VPSVDGPKMKGNTIGYI-- 508 (1007)
Q Consensus 461 ~~~g~------Gi~~~--i~--g~~i~-ig~~~~-~~~~~~-------~~-----------~~~~~~~~~~g~~~i~v-- 508 (1007)
+++.. ++... .+ +..+. -|..+- +++... .. .....++..+|.+++.+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 22211 11111 01 11222 232221 111100 00 00112233444444444
Q ss_pred ----------------------EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-
Q 001837 509 ----------------------FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN- 565 (1007)
Q Consensus 509 ----------------------~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~- 565 (1007)
+.|++|+|++++.||||++++++|+.|+++||+|+|+|||++.||.+||+++|+..+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 458899999999999999999999999999999999999999999999999998643
Q ss_pred ----------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCc
Q 001837 566 ----------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGS 616 (1007)
Q Consensus 566 ----------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs 616 (1007)
.+|+|++|++|.+||+.||++| .|||+|||+||+||||.||||||||.+|+
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 7999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhh-------HHHHHHHHHHHHHH
Q 001837 617 ALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA----LGGH-------PLVWAAVLADVGTC 685 (1007)
Q Consensus 617 ~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la----~~g~-------~~~~~ail~~~~s~ 685 (1007)
++||++||+||.||||++|..+|++||++|.|+++++.|.+..|+..+.+. ++|+ +.+|+++++|-+++
T Consensus 708 dVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA 787 (972)
T KOG0202|consen 708 DVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPA 787 (972)
T ss_pred HhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCch
Confidence 999999999999999999999999999999999999999999999744333 3443 47999999999988
Q ss_pred HHHHHh--hhhhcccccCCCC
Q 001837 686 LIVILN--SMLLLHETHTHRG 704 (1007)
Q Consensus 686 l~vvlN--Slrll~~~~~~~~ 704 (1007)
-.+-+| ..=+.+++|++..
T Consensus 788 ~aLG~ep~D~DiM~kpPR~~~ 808 (972)
T KOG0202|consen 788 TALGFEPVDPDIMKKPPRDSK 808 (972)
T ss_pred hhcCCCCCChhHHhCCCCCCC
Confidence 888887 5556666666654
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-82 Score=797.55 Aligned_cols=590 Identities=21% Similarity=0.289 Sum_probs=463.6
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+...+...+|+|....+.+.+++.. ++..|.+|+.++++++.++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~~~--------~l~q~~~~~~~iL~~aail---------------------------- 74 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAKAM--------LLHQVCNAMCMVLIIAAAI---------------------------- 74 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHHHH--------HHHHHhCHHHHHHHHHHHH----------------------------
Confidence 3345567789998876665555442 4566667776655444333
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
++++++|.++++|+++++++..+..++++++++.+++|+++.+.+++|+||| ++|+++||||||||.|++||+|||
T Consensus 75 --s~~~~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPA 152 (1053)
T TIGR01523 75 --SFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPA 152 (1053)
T ss_pred --HHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeec
Confidence 3344778899999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred cEEEEece-eeeecccCCCCCeeeEecC---------------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHH
Q 001837 230 DGIVVDGK-CEVDEKTLTGESYPVSKQK---------------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293 (1007)
Q Consensus 230 DgiVl~G~-~~VDES~LTGES~Pv~K~~---------------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~ 293 (1007)
|++|+++. +.||||+|||||.||.|.+ .|++|+||.|.+|.+.++|++||.+|.+|+|.+++.+
T Consensus 153 D~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~ 232 (1053)
T TIGR01523 153 DLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQG 232 (1053)
T ss_pred cEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhh
Confidence 99999984 9999999999999999964 2678999999999999999999999999999998865
Q ss_pred hhc-----------------------------------cchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHH
Q 001837 294 AQN-----------------------------------SKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW 338 (1007)
Q Consensus 294 a~~-----------------------------------~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~ 338 (1007)
... .+||+|+.++++++++..+.++++++++++.++ ......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~ 309 (1053)
T TIGR01523 233 DGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEV 309 (1053)
T ss_pred hhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHH
Confidence 431 248999999999999888777777766654332 112345
Q ss_pred HHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCC-----
Q 001837 339 FHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLS----- 413 (1007)
Q Consensus 339 ~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~----- 413 (1007)
+.++++++++++|++||+.++++++.++++|+++++++|++.++|+||.+++||+|||||||+|+|+|.+++..+
T Consensus 310 ~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~ 389 (1053)
T TIGR01523 310 AIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTIS 389 (1053)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEE
Confidence 677899999999999999999999999999999999999999999999999999999999999999999886421
Q ss_pred -----CCC---------------------------------------C---------HHHHHHHHHhh-----h------
Q 001837 414 -----EDI---------------------------------------N---------LNTLLYWVSSI-----E------ 429 (1007)
Q Consensus 414 -----~~~---------------------------------------~---------~~~lL~~~asl-----e------ 429 (1007)
..+ + ..+++..++.. .
T Consensus 390 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~ 469 (1053)
T TIGR01523 390 IDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD 469 (1053)
T ss_pred ecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCC
Confidence 000 0 01233222211 1
Q ss_pred --hcCCChHHHHHHHHhhhCCCCCC-------C--------------------CCcccceeccCC----ceEEEE--C-C
Q 001837 430 --SKSSHPMSAALVEYGRSLSIEPK-------P--------------------EDVEDYQNFPGE----GIYGKI--G-G 473 (1007)
Q Consensus 430 --~~s~hPi~~AIv~~a~~~~i~~~-------~--------------------~~~~~~~~~~g~----Gi~~~i--~-g 473 (1007)
...++|++.|++.++...+++.. . ........+|.. -+...+ + +
T Consensus 470 ~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~ 549 (1053)
T TIGR01523 470 CWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHG 549 (1053)
T ss_pred ceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCC
Confidence 12369999999999987776310 0 001112223322 122222 1 2
Q ss_pred E---EEEEecHHHHHHhCC--------CC--C---------CCcCCcCCCCCeEEEEE----------------------
Q 001837 474 E---EIYIGNRKIAQRAGC--------GT--V---------PSVDGPKMKGNTIGYIF---------------------- 509 (1007)
Q Consensus 474 ~---~i~ig~~~~~~~~~~--------~~--~---------~~~~~~~~~g~~~i~v~---------------------- 509 (1007)
. .+..|.++.+....- .. + ...+++..+|.+++.++
T Consensus 550 ~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~ 629 (1053)
T TIGR01523 550 ETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRA 629 (1053)
T ss_pred CEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchh
Confidence 2 234577765422110 00 0 11234556677765543
Q ss_pred ---ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---------------------
Q 001837 510 ---SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--------------------- 565 (1007)
Q Consensus 510 ---~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--------------------- 565 (1007)
.|++|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..+
T Consensus 630 ~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~ 709 (1053)
T TIGR01523 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709 (1053)
T ss_pred hhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh
Confidence 46789999999999999999999999999999999999999999999999999632
Q ss_pred --------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecC
Q 001837 566 --------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSN 630 (1007)
Q Consensus 566 --------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~ 630 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+|||++||||||||.+|+++|+++||++|+++
T Consensus 710 ~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd 789 (1053)
T TIGR01523 710 ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDD 789 (1053)
T ss_pred hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecC
Confidence 4999999999999999999999 8999999999999999999999999889999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h----h--------hHHHHHHHHHHHHHHHHHHHh--h
Q 001837 631 DIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL----G----G--------HPLVWAAVLADVGTCLIVILN--S 692 (1007)
Q Consensus 631 ~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~----~----g--------~~~~~~ail~~~~s~l~vvlN--S 692 (1007)
+|..|+.++++||++|+++++.+.|.++.|+..+++.+ + | ++.+|++++++.++++.+.+. .
T Consensus 790 ~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~ 869 (1053)
T TIGR01523 790 NFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAA 869 (1053)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999999999999986433322 2 1 234788888888887776653 3
Q ss_pred hhhcccccCC
Q 001837 693 MLLLHETHTH 702 (1007)
Q Consensus 693 lrll~~~~~~ 702 (1007)
--+++++|+.
T Consensus 870 ~~~m~~~Pr~ 879 (1053)
T TIGR01523 870 PDLMDRLPHD 879 (1053)
T ss_pred hhHHhcCCCC
Confidence 3344444443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-83 Score=802.66 Aligned_cols=530 Identities=25% Similarity=0.374 Sum_probs=437.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-e
Q 001837 162 EAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-C 238 (1007)
Q Consensus 162 ~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~ 238 (1007)
++.+|++++.++..+...+++|+.+.+++|++..+..+.|+||| ++|+++||||||||+|++||+||||++|++++ +
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 34456666677777778888889999999999999999999999 89999999999999999999999999999998 5
Q ss_pred eeecccCCCCCeeeEec--------------CCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHH
Q 001837 239 EVDEKTLTGESYPVSKQ--------------KGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRF 304 (1007)
Q Consensus 239 ~VDES~LTGES~Pv~K~--------------~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~ 304 (1007)
.||||+|||||.|+.|. ..|++|+||.|.+|.+.++|++||.+|.+|++.+++.......+|+++.
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 3588999999999999999999999999999999999877889999999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhh
Q 001837 305 VDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384 (1007)
Q Consensus 305 ~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~ 384 (1007)
++++..++..+.++++++++++.++.+..++...+.++++++++++|++||+.++++++.++.+|+++++++|+++++|+
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~ 344 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIET 344 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhh
Confidence 99999999999999999998888666544477889999999999999999999999999999999999999999999999
Q ss_pred ccCccEEEecCccccccCceEEEEeecCC--CCCC---------HHHHHHHHHhh---hh------cCCChHHHHHHHHh
Q 001837 385 LAKVRFMAFDKTGTITRGEFVMSEFQPLS--EDIN---------LNTLLYWVSSI---ES------KSSHPMSAALVEYG 444 (1007)
Q Consensus 385 Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~--~~~~---------~~~lL~~~asl---e~------~s~hPi~~AIv~~a 444 (1007)
||++|+||+|||||||+|+|+|.+++..+ .+.+ ...++..++.. .. ..++|++.||++++
T Consensus 345 LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a 424 (917)
T COG0474 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFA 424 (917)
T ss_pred ccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHH
Confidence 99999999999999999999999999873 2222 01123322211 11 26799999999999
Q ss_pred hhCCC--CCCCCCc--ccceeccCCc----eEEEEC---C--EEEEEecHHHHHH-hCC----CCC---------CCcCC
Q 001837 445 RSLSI--EPKPEDV--EDYQNFPGEG----IYGKIG---G--EEIYIGNRKIAQR-AGC----GTV---------PSVDG 497 (1007)
Q Consensus 445 ~~~~i--~~~~~~~--~~~~~~~g~G----i~~~i~---g--~~i~ig~~~~~~~-~~~----~~~---------~~~~~ 497 (1007)
.+.+. +...... ....++|... +...++ + ..+.-|.++.+.. ... ... ...++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (917)
T COG0474 425 EKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKE 504 (917)
T ss_pred HhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHH
Confidence 98876 3211111 1244445432 222221 2 2344577766422 110 000 00111
Q ss_pred cCCCCCeE-----------------EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 498 PKMKGNTI-----------------GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 498 ~~~~g~~~-----------------i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
++.+|+++ ..++.|+.|+|+++|+||||++++++|+.|+++||++||+|||++.||++||+++
T Consensus 505 la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 505 LASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred HHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc
Confidence 22222211 3467889999999999999999999999999999999999999999999999999
Q ss_pred CCCcc---------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 561 GNALN---------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 561 GI~~~---------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
|+..+ .||||++|+||.+||+.||+.| .|+|+|||+||+||||+||||||||
T Consensus 585 Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg 664 (917)
T COG0474 585 GIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMG 664 (917)
T ss_pred CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEec
Confidence 97532 5899999999999999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------hHHHHHHHHH
Q 001837 613 ISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG------------HPLVWAAVLA 680 (1007)
Q Consensus 613 ~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g------------~~~~~~ail~ 680 (1007)
.+|+++|+++||+++++++|..+..++++||++|.|+++.+.|.+..|+..+++.+++ ++.+|++++.
T Consensus 665 ~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~ 744 (917)
T COG0474 665 GEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLT 744 (917)
T ss_pred ccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999843333221 2467888888
Q ss_pred HHHHHHHHHHh
Q 001837 681 DVGTCLIVILN 691 (1007)
Q Consensus 681 ~~~s~l~vvlN 691 (1007)
+.++++.+.+.
T Consensus 745 d~~pa~~L~~~ 755 (917)
T COG0474 745 DSLPALALGVE 755 (917)
T ss_pred hhhhhheeecC
Confidence 87777766555
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=745.47 Aligned_cols=490 Identities=27% Similarity=0.365 Sum_probs=422.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc-eEEec-CC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 166 IVFLFTIAEWLESRASHKATAVMSSLMSIAPQK-AIIAG-TG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 166 Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~-~~V~r-dg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++..+++.++|.++++|+++.+++|+++.|.. ++|+| +| ++|++++|+|||+|+|++||+||+||+|++|.+.||
T Consensus 73 l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~~VD 152 (675)
T TIGR01497 73 LFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVASVD 152 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccEEEE
Confidence 444567899999999999999999999988874 77765 77 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCCCe---eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHH
Q 001837 242 EKTLTGESYPVSKQKGST---VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIF 318 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g~~---V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ 318 (1007)
||+|||||.||.|++|+. ||+||.|.+|.+.++|+++|.+|+++||.+++++++.+++|+|..++.+..++..++++
T Consensus 153 ESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li 232 (675)
T TIGR01497 153 ESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL 232 (675)
T ss_pred cccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 99999999999999999999999999999999999999999998888877665544333
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccc
Q 001837 319 ISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGT 398 (1007)
Q Consensus 319 ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGT 398 (1007)
+.++ ++++..+.....++..++++++++|||+|+...+.....++.+|+++|+++|+++++|+||++|+||||||||
T Consensus 233 ~~~~---~~~~~~~~~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGT 309 (675)
T TIGR01497 233 VTAT---LWPFAAYGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGT 309 (675)
T ss_pred HHHH---HHHHHHhcChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCc
Confidence 3222 2221111222335677899999999999998888888899999999999999999999999999999999999
Q ss_pred cccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCC--CcccceeccCC-ceEEE--ECC
Q 001837 399 ITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPE--DVEDYQNFPGE-GIYGK--IGG 473 (1007)
Q Consensus 399 LT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~--~~~~~~~~~g~-Gi~~~--i~g 473 (1007)
||+|+|++.++++.+ ..+.++++.+++..+..+.||.++||++++++.+++.... ...++..+++. ++.+. .+|
T Consensus 310 LT~g~~~v~~~~~~~-~~~~~~ll~~aa~~~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g 388 (675)
T TIGR01497 310 ITLGNRLASEFIPAQ-GVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG 388 (675)
T ss_pred ccCCCeEEEEEEecC-CCcHHHHHHHHHHhcCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCC
Confidence 999999999998654 3567788888888899999999999999998877643211 12344555555 45554 378
Q ss_pred EEEEEecHHHHH----HhCCCCC----CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEE
Q 001837 474 EEIYIGNRKIAQ----RAGCGTV----PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAML 545 (1007)
Q Consensus 474 ~~i~ig~~~~~~----~~~~~~~----~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~ml 545 (1007)
+.+..|+++++. ..+.... ...+++..+|.++++++.|++++|++.++|++||+++++|++||++|++++|+
T Consensus 389 ~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~mi 468 (675)
T TIGR01497 389 RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMI 468 (675)
T ss_pred eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEE
Confidence 899999986643 2222211 11234567899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC
Q 001837 546 TGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQ 624 (1007)
Q Consensus 546 TGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD 624 (1007)
|||+..+|.++|+++||+ .+|+|++|+||.++|+.+|+.| .|+|+|||+||+|||++|||||||| +|+++++++||
T Consensus 469 TGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaad 545 (675)
T TIGR01497 469 TGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 545 (675)
T ss_pred cCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 999999999999999999 9999999999999999999998 8999999999999999999999999 89999999999
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 625 VILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 625 iVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
++++++||..|++++++||+++-+......|+++-++.
T Consensus 546 ivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 546 MVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999998888888888775553
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-81 Score=789.47 Aligned_cols=620 Identities=18% Similarity=0.250 Sum_probs=481.1
Q ss_pred CCcccHHHHHHHhhh--------cccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHH
Q 001837 56 ALLISQHQIVKALNQ--------ARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFP 127 (1007)
Q Consensus 56 ~~~~s~~~I~~aL~~--------aGy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p 127 (1007)
....+.+++.+.++. ...+.+...+|+|....+.+.+++. .|+..|++|+.|+++++++++..-
T Consensus 17 ~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~--------~~l~~~~~~~~~iL~~aa~l~~~~ 88 (997)
T TIGR01106 17 DHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWV--------KFCRQLFGGFSMLLWIGAILCFLA 88 (997)
T ss_pred chhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHH--------HHHHHHhcchHHHHHHHHHHHHHH
Confidence 334466776666643 2334456778999887665555543 256777788877665544432211
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--
Q 001837 128 IILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG-- 205 (1007)
Q Consensus 128 ~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg-- 205 (1007)
+. +.. ..+.. ...++|+++++++++++++.++..++++|+.+.+++|.++.|.+++|+|||
T Consensus 89 ~~---~~~-~~~~~-------------~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~ 151 (997)
T TIGR01106 89 YG---IQA-STEEE-------------PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK 151 (997)
T ss_pred HH---Hhh-ccCCC-------------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE
Confidence 00 000 00000 011356777788888888999999999999999999999999999999999
Q ss_pred EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCCCCCeeeEecCCC----------eeeeceEEeeeeEEEE
Q 001837 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS----------TVWAGTINLNGYISVE 274 (1007)
Q Consensus 206 ~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~----------~V~aGT~v~~G~~~~~ 274 (1007)
++|+++||+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.+++ ++|+||.+++|.+.++
T Consensus 152 ~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~ 231 (997)
T TIGR01106 152 MSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGI 231 (997)
T ss_pred EEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEE
Confidence 79999999999999999999999999999996 899999999999999998763 7999999999999999
Q ss_pred EEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccc
Q 001837 275 TTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCAL 354 (1007)
Q Consensus 275 V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL 354 (1007)
|++||.+|.+|++.+++.+++.+++|+++.+++++++++++++++++++++++++.+ .++...+.+++++++++||++|
T Consensus 232 V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 232 VVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-YTWLEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred EEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999999888889999999999999999988888887777665544 4666778889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------CC----
Q 001837 355 ILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------IN---- 417 (1007)
Q Consensus 355 ~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~~---- 417 (1007)
+++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. .+
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSA 390 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccH
Confidence 9999999999999999999999999999999999999999999999999999998742210 11
Q ss_pred -HHHHHHHHHhhh----------------hcCCChHHHHHHHHhhhCCCCCCC--CCcccceeccCC---c-eEEEE---
Q 001837 418 -LNTLLYWVSSIE----------------SKSSHPMSAALVEYGRSLSIEPKP--EDVEDYQNFPGE---G-IYGKI--- 471 (1007)
Q Consensus 418 -~~~lL~~~asle----------------~~s~hPi~~AIv~~a~~~~i~~~~--~~~~~~~~~~g~---G-i~~~i--- 471 (1007)
.+.++..++... ...++|++.|+++++...+.+... ........+|.. . ....+
T Consensus 391 ~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~ 470 (997)
T TIGR01106 391 TWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENE 470 (997)
T ss_pred HHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEecc
Confidence 113444333321 124689999999998754332100 011112222221 1 11111
Q ss_pred C--C-E--EEEEecHHHHHHhC-------CCC-C---------CCcCCcCCCCCeEEEE---------------------
Q 001837 472 G--G-E--EIYIGNRKIAQRAG-------CGT-V---------PSVDGPKMKGNTIGYI--------------------- 508 (1007)
Q Consensus 472 ~--g-~--~i~ig~~~~~~~~~-------~~~-~---------~~~~~~~~~g~~~i~v--------------------- 508 (1007)
+ + . .+..|+++.+.... ... + ...+++..+|.+++.+
T Consensus 471 ~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~ 550 (997)
T TIGR01106 471 DPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDV 550 (997)
T ss_pred CCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhh
Confidence 1 1 1 24567776542211 000 0 0122344556665533
Q ss_pred ---EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------------
Q 001837 509 ---FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------------- 565 (1007)
Q Consensus 509 ---~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------------- 565 (1007)
+.|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+..+
T Consensus 551 ~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~ 630 (997)
T TIGR01106 551 NFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVN 630 (997)
T ss_pred hccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccc
Confidence 457789999999999999999999999999999999999999999999999999421
Q ss_pred -------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCC
Q 001837 566 -------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGI 613 (1007)
Q Consensus 566 -------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~ 613 (1007)
.||||++|+||.+||+.||+.| +|+|+|||+||+|||++||||||||.
T Consensus 631 ~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~ 710 (997)
T TIGR01106 631 PRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI 710 (997)
T ss_pred cccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCC
Confidence 2999999999999999999999 89999999999999999999999998
Q ss_pred CCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h-------hHHHHHHHHHHH
Q 001837 614 SGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----G-------HPLVWAAVLADV 682 (1007)
Q Consensus 614 ~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g-------~~~~~~ail~~~ 682 (1007)
+|+++|+++||+||++|+|..|+++|++||++|.|+++++.|.++.|+..+++.++ + ++.+|++++++.
T Consensus 711 ~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~ 790 (997)
T TIGR01106 711 AGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDM 790 (997)
T ss_pred cccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999865433332 2 245788989998
Q ss_pred HHHHHHHHh--hhhhcccccC
Q 001837 683 GTCLIVILN--SMLLLHETHT 701 (1007)
Q Consensus 683 ~s~l~vvlN--Slrll~~~~~ 701 (1007)
++++.+... +-.+++++|+
T Consensus 791 lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 791 VPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHhcCCCCcccccCCCc
Confidence 888877763 3444444444
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-82 Score=731.62 Aligned_cols=515 Identities=21% Similarity=0.320 Sum_probs=414.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCC
Q 001837 170 FTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLT 246 (1007)
Q Consensus 170 ~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LT 246 (1007)
.+++.|-+.++-++.++. ....+..|+|+| ++|++.||++|||+.|+.||+|||||++++|+ +.||||++|
T Consensus 199 tA~nDy~qe~QF~~L~~~------k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlT 272 (1034)
T KOG0204|consen 199 TAVNDYRQELQFRKLQKE------KRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLT 272 (1034)
T ss_pred eecchhHHhhhhhhhhhh------hhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEeccccc
Confidence 356677666665554422 234577899999 79999999999999999999999999999995 999999999
Q ss_pred CCCeeeEecC--CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHH
Q 001837 247 GESYPVSKQK--GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVA 324 (1007)
Q Consensus 247 GES~Pv~K~~--g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~ 324 (1007)
|||.+++|.+ +.++++||++.+|.+++.||.+|.+|.+|+++.++.+....++|+|-++++++..+..+.++++++++
T Consensus 273 GESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~ 352 (1034)
T KOG0204|consen 273 GESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTF 352 (1034)
T ss_pred CCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965 78999999999999999999999999999999999998889999999999999999888888887777
Q ss_pred HHHHHhcC--------C-----------chhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhc
Q 001837 325 VIPIALGV--------S-----------NHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTL 385 (1007)
Q Consensus 325 l~~~~~~~--------~-----------~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~L 385 (1007)
++....++ . .+-.+|..++.++++|+|++||+++++++++++++|.+.+.|+|.+++.|++
T Consensus 353 ~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETM 432 (1034)
T KOG0204|consen 353 IVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETM 432 (1034)
T ss_pred HHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhc
Confidence 66443221 0 0122356678999999999999999999999999999999999999999999
Q ss_pred cCccEEEecCccccccCceEEEEeecCCCCCCH---------HHHHHH-HHh-----------------hhhcCCChHHH
Q 001837 386 AKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL---------NTLLYW-VSS-----------------IESKSSHPMSA 438 (1007)
Q Consensus 386 g~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~---------~~lL~~-~as-----------------le~~s~hPi~~ 438 (1007)
|..++||.|||||||.|+|+|++.+..++.+.. ..+..+ +.+ .....++|.|.
T Consensus 433 GsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~ 512 (1034)
T KOG0204|consen 433 GSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTEC 512 (1034)
T ss_pred CCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHH
Confidence 999999999999999999999997765433220 111111 111 22456899999
Q ss_pred HHHHHhhhCCCCCCCCCcc--cceeccC------CceEEEE-CCE--EEEEecHHHHHHhCCCC---------C------
Q 001837 439 ALVEYGRSLSIEPKPEDVE--DYQNFPG------EGIYGKI-GGE--EIYIGNRKIAQRAGCGT---------V------ 492 (1007)
Q Consensus 439 AIv~~a~~~~i~~~~~~~~--~~~~~~g------~Gi~~~i-~g~--~i~ig~~~~~~~~~~~~---------~------ 492 (1007)
||+.++..+|.+.+..+.+ -+..++. .|+..+. ++. ...-|..+......... .
T Consensus 513 AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~ 592 (1034)
T KOG0204|consen 513 ALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK 592 (1034)
T ss_pred HHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHH
Confidence 9999999888764222211 1111221 1222221 222 12223333321110000 0
Q ss_pred ---CCcCCcCCCCCeEEE---------------------EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCC
Q 001837 493 ---PSVDGPKMKGNTIGY---------------------IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD 548 (1007)
Q Consensus 493 ---~~~~~~~~~g~~~i~---------------------v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD 548 (1007)
..++.++.++.+.+. ...+++++|+++++||+|||++++|+.|+++||+|.|+|||
T Consensus 593 ~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGD 672 (1034)
T KOG0204|consen 593 SFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGD 672 (1034)
T ss_pred HHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCC
Confidence 002223333333332 33567899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCcc---------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHH
Q 001837 549 NQSAAMQAQEQLGNALN---------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAP 600 (1007)
Q Consensus 549 ~~~tA~~vA~~lGI~~~---------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ 600 (1007)
|..||++||.+|||..+ .|+||.+|.||..+|+.|++.| +||.+|||+||+|
T Consensus 673 NI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaP 752 (1034)
T KOG0204|consen 673 NINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAP 752 (1034)
T ss_pred cHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCch
Confidence 99999999999999754 7999999999999999999999 9999999999999
Q ss_pred HHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Q 001837 601 ALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG---------- 670 (1007)
Q Consensus 601 ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g---------- 670 (1007)
||++||||+|||++|+++|||+|||||+||||++|+.+++|||..|.+|+|+++|.++.|++++++++.+
T Consensus 753 ALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLt 832 (1034)
T KOG0204|consen 753 ALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLT 832 (1034)
T ss_pred hhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888777764
Q ss_pred -hHHHHHHHHHHHHHHHHHHH
Q 001837 671 -HPLVWAAVLADVGTCLIVIL 690 (1007)
Q Consensus 671 -~~~~~~ail~~~~s~l~vvl 690 (1007)
.+.+|.+++||.+.+|.+.-
T Consensus 833 AVQlLWVNLIMDTLgALALAT 853 (1034)
T KOG0204|consen 833 AVQLLWVNLIMDTLGALALAT 853 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 36899999999998887765
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=763.65 Aligned_cols=543 Identities=21% Similarity=0.298 Sum_probs=440.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe
Q 001837 158 NDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD 235 (1007)
Q Consensus 158 ~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~ 235 (1007)
.+|+++++|+++++++..+..++++|+++.+++|.++.+.+++|+||| ++|+++||||||+|.|++||+|||||+|++
T Consensus 34 ~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~ 113 (917)
T TIGR01116 34 TAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS 113 (917)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE
Confidence 478899999999999999999999999999999999999999999999 789999999999999999999999999999
Q ss_pred ce-eeeecccCCCCCeeeEecCC-------------CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHH
Q 001837 236 GK-CEVDEKTLTGESYPVSKQKG-------------STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRI 301 (1007)
Q Consensus 236 G~-~~VDES~LTGES~Pv~K~~g-------------~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~l 301 (1007)
|+ +.||||+|||||.|+.|.++ +++|+||.|.+|.+.++|++||.+|.+|+|.+++..++.+++|+
T Consensus 114 ~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~l 193 (917)
T TIGR01116 114 LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPL 193 (917)
T ss_pred ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCH
Confidence 95 99999999999999999875 88999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC-----Cc----hhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHc
Q 001837 302 QRFVDKFSQYYTPAVIFISACVAVIPIALGV-----SN----HKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATS 372 (1007)
Q Consensus 302 q~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~-----~~----~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~ 372 (1007)
|+.+++++.++++++++++++++++++.... .+ +..++..+++++++++|++|+++++++++.++++|+++
T Consensus 194 q~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~ 273 (917)
T TIGR01116 194 QKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKK 273 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHC
Confidence 9999999999988877777776665432211 11 12234567889999999999999999999999999999
Q ss_pred CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------CC-------------------HHH
Q 001837 373 GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------IN-------------------LNT 420 (1007)
Q Consensus 373 gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~~-------------------~~~ 420 (1007)
++++|+++++|+||++|+||||||||||+|+|+|.+++..++. +. ...
T Consensus 274 ~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (917)
T TIGR01116 274 NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEE 353 (917)
T ss_pred CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHH
Confidence 9999999999999999999999999999999999998754310 00 112
Q ss_pred HHHHHHhhhh-------------cCCChHHHHHHHHhhhCCCCCCCC------------------CcccceeccC----C
Q 001837 421 LLYWVSSIES-------------KSSHPMSAALVEYGRSLSIEPKPE------------------DVEDYQNFPG----E 465 (1007)
Q Consensus 421 lL~~~asle~-------------~s~hPi~~AIv~~a~~~~i~~~~~------------------~~~~~~~~~g----~ 465 (1007)
++..++.... ..++|++.|+++++.+.+++.... .......+|. +
T Consensus 354 l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK 433 (917)
T TIGR01116 354 LATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRK 433 (917)
T ss_pred HHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhC
Confidence 2222221110 136999999999998877543110 0011122222 1
Q ss_pred ceEEEEC--C-E-EEEEecHHHHHHhCCC-------CC-----------CCcCCcCC-CCCeEEEEE-------------
Q 001837 466 GIYGKIG--G-E-EIYIGNRKIAQRAGCG-------TV-----------PSVDGPKM-KGNTIGYIF------------- 509 (1007)
Q Consensus 466 Gi~~~i~--g-~-~i~ig~~~~~~~~~~~-------~~-----------~~~~~~~~-~g~~~i~v~------------- 509 (1007)
.+...+. + . .+.-|+++.+....-. .. ...+++.. +|.+++.++
T Consensus 434 ~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~ 513 (917)
T TIGR01116 434 SMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLL 513 (917)
T ss_pred eEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccccc
Confidence 2222221 2 2 2334777665332110 00 01234455 676666543
Q ss_pred ----------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------
Q 001837 510 ----------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------- 565 (1007)
Q Consensus 510 ----------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------- 565 (1007)
.|++|+|+++++||+|++++++|++||++||+++|+|||+..||.++|+++|+..+
T Consensus 514 ~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l 593 (917)
T TIGR01116 514 SDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF 593 (917)
T ss_pred ccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH
Confidence 46789999999999999999999999999999999999999999999999999641
Q ss_pred ---------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEec
Q 001837 566 ---------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMS 629 (1007)
Q Consensus 566 ---------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~ 629 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+|||++|||||+|| +|+++++++||+++.+
T Consensus 594 ~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~d 672 (917)
T TIGR01116 594 DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLAD 672 (917)
T ss_pred hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEcc
Confidence 5999999999999999999998 8999999999999999999999999 8999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h-------hHHHHHHHHHHHHHHHHHHHh--hhhhc
Q 001837 630 NDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----G-------HPLVWAAVLADVGTCLIVILN--SMLLL 696 (1007)
Q Consensus 630 ~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g-------~~~~~~ail~~~~s~l~vvlN--Slrll 696 (1007)
|+|..|++++++||++|.|+++++.|.++.|+..+++.++ + ++.+|++++++.++++.+.+. +-.++
T Consensus 673 d~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m 752 (917)
T TIGR01116 673 DNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIM 752 (917)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHh
Confidence 9999999999999999999999999999999964433332 3 246788888888887776653 33444
Q ss_pred ccccC
Q 001837 697 HETHT 701 (1007)
Q Consensus 697 ~~~~~ 701 (1007)
+++|+
T Consensus 753 ~~pP~ 757 (917)
T TIGR01116 753 WKPPR 757 (917)
T ss_pred cCCCC
Confidence 44443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-77 Score=758.19 Aligned_cols=578 Identities=19% Similarity=0.227 Sum_probs=443.2
Q ss_pred hhcccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHH
Q 001837 69 NQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVL 148 (1007)
Q Consensus 69 ~~aGy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ 148 (1007)
.+.....+...+|+|....+.+ +++- .+++.+.+|+.++.++++++
T Consensus 141 s~~e~~~r~~~yG~N~i~~~~~-s~~~--------ll~~~~~~p~~i~~i~~~~l------------------------- 186 (1054)
T TIGR01657 141 TTGDIAQRKAKYGKNEIEIPVP-SFLE--------LLKEEVLHPFYVFQVFSVIL------------------------- 186 (1054)
T ss_pred CHHHHHHHHHhcCCCeeecCCC-CHHH--------HHHHHHhchHHHHHHHHHHH-------------------------
Confidence 3344445566788887765443 3322 14555566665544332222
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEe--CC
Q 001837 149 IAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVK--AG 224 (1007)
Q Consensus 149 ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~--~G 224 (1007)
+++.++|.++++++++++++.++..++++|+.+.++++.. .+..++|+||| ++|+++||+|||+|.|+ +|
T Consensus 187 -----~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g 260 (1054)
T TIGR01657 187 -----WLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEE 260 (1054)
T ss_pred -----HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCC
Confidence 2233456778888888889999999999999998888655 57789999999 78999999999999999 99
Q ss_pred CcccccEEEEeceeeeecccCCCCCeeeEecC------------------CCeeeeceEEee-------eeEEEEEEEEe
Q 001837 225 EVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK------------------GSTVWAGTINLN-------GYISVETTAVA 279 (1007)
Q Consensus 225 e~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~------------------g~~V~aGT~v~~-------G~~~~~V~~tG 279 (1007)
++||||++|++|++.||||+|||||.|+.|.+ ++++|+||.|++ |.+.++|++||
T Consensus 261 ~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG 340 (1054)
T TIGR01657 261 KTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTG 340 (1054)
T ss_pred CEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCC
Confidence 99999999999999999999999999999975 236999999995 78999999999
Q ss_pred cceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHH
Q 001837 280 EDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTP 359 (1007)
Q Consensus 280 ~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~ 359 (1007)
.+|..|++.+++..++..++++++.+.++..++..+.++.++++++. .+....++...+.+++.++++++|++||++++
T Consensus 341 ~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~t 419 (1054)
T TIGR01657 341 FSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDGRPLGKIILRSLDIITIVVPPALPAELS 419 (1054)
T ss_pred ccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 99999999999988888888998888887766544433332222222 12222466777899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC------------CHHHHHHHHHh
Q 001837 360 VVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI------------NLNTLLYWVSS 427 (1007)
Q Consensus 360 la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~------------~~~~lL~~~as 427 (1007)
++++.++.+|+++|+++|++.++|.+|++|++|||||||||+|+|+|.+++..+... ....++..++.
T Consensus 420 i~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 499 (1054)
T TIGR01657 420 IGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALAT 499 (1054)
T ss_pred HHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999998654211 11222333332
Q ss_pred hh-------hcCCChHHHHHHHHhhhCCCC-CC----------------CCCcccceeccCC----ceE--EEEC--CE-
Q 001837 428 IE-------SKSSHPMSAALVEYGRSLSIE-PK----------------PEDVEDYQNFPGE----GIY--GKIG--GE- 474 (1007)
Q Consensus 428 le-------~~s~hPi~~AIv~~a~~~~i~-~~----------------~~~~~~~~~~~g~----Gi~--~~i~--g~- 474 (1007)
.. ...++|++.|+++++....-. .. .........+|.. .+. .+.. ++
T Consensus 500 C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~ 579 (1054)
T TIGR01657 500 CHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSP 579 (1054)
T ss_pred CCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeE
Confidence 22 245899999999986422100 00 0011111122221 111 2222 22
Q ss_pred -EEEEecHHHHHHhCCC-CCC-----CcCCcCCCCCeEEEEE---------------------ECCEEEEEEEecCcccc
Q 001837 475 -EIYIGNRKIAQRAGCG-TVP-----SVDGPKMKGNTIGYIF---------------------SGASPVGIFCLSDACRT 526 (1007)
Q Consensus 475 -~i~ig~~~~~~~~~~~-~~~-----~~~~~~~~g~~~i~v~---------------------~d~~~lGli~l~D~lR~ 526 (1007)
.+..|+++.+...... ..+ ..+++..+|.+++.++ .|++|+|+++|+||+||
T Consensus 580 ~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~ 659 (1054)
T TIGR01657 580 DAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKP 659 (1054)
T ss_pred EEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCc
Confidence 4566888877553221 111 2455677888887765 36789999999999999
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-----------------------------------------
Q 001837 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------------------- 565 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------------------- 565 (1007)
+++++|++|+++||+++|+|||++.||.+||+++||..+
T Consensus 660 ~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1054)
T TIGR01657 660 DTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPL 739 (1054)
T ss_pred cHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcc
Confidence 999999999999999999999999999999999999410
Q ss_pred ----------------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhh
Q 001837 566 ----------------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 566 ----------------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ 604 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+||||+
T Consensus 740 ~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~ 819 (1054)
T TIGR01657 740 GQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQ 819 (1054)
T ss_pred cccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHh
Confidence 4999999999999999999999 99999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhh-----hHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA----LGG-----HPLVW 675 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la----~~g-----~~~~~ 675 (1007)
||||||||. +++ ..+||+++.+++|+.|+.+|++||+++.++++.+.|.+.|+++.+... +.| ++.+|
T Consensus 820 AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~ 896 (1054)
T TIGR01657 820 ADVGISLSE--AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLT 896 (1054)
T ss_pred cCcceeecc--ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHHH
Confidence 999999973 344 488999999999999999999999999999999999999998643222 222 24678
Q ss_pred HHHHHHHHHHHHHHH
Q 001837 676 AAVLADVGTCLIVIL 690 (1007)
Q Consensus 676 ~ail~~~~s~l~vvl 690 (1007)
+.++++.+.++.+..
T Consensus 897 i~li~~~~~~l~l~~ 911 (1054)
T TIGR01657 897 IDLLLIFPVALLMSR 911 (1054)
T ss_pred HHHHHHHHHHHHHHc
Confidence 887777665555544
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-76 Score=704.74 Aligned_cols=483 Identities=29% Similarity=0.420 Sum_probs=430.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCcceEEecCC-EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecc
Q 001837 167 VFLFTIAEWLESRASHKATAVMSSLMS--IAPQKAIIAGTG-EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEK 243 (1007)
Q Consensus 167 l~l~~i~~~le~~~~~k~~~~l~~L~~--~~p~~~~V~rdg-~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES 243 (1007)
+++.+++.+++.++++++.+.+++|.+ ..|.+++++|+| ++|++++|+|||+|+|++||+|||||+|++|++.||||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~~vdes 82 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNGWKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSCFVDES 82 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECCeEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccEEEEcc
Confidence 456678889999999999999999998 889999999988 88999999999999999999999999999999999999
Q ss_pred cCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHH-HhHhHHHHHHHHH
Q 001837 244 TLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS-QYYTPAVIFISAC 322 (1007)
Q Consensus 244 ~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~-~~~~~i~l~ia~l 322 (1007)
+|||||.|+.|.+|+.+++||.+.+|.+.++|+++|.+|..+++..++..+...++++++..+++. .++++++++++++
T Consensus 83 ~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 83 NLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred cccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888999999999999 7999988888888
Q ss_pred HHHHHHHhcCC--chhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccc
Q 001837 323 VAVIPIALGVS--NHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTIT 400 (1007)
Q Consensus 323 ~~l~~~~~~~~--~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT 400 (1007)
++++|++.... ++..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT 242 (499)
T TIGR01494 163 VFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLT 242 (499)
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccc
Confidence 88776655433 3677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECC--EEEEE
Q 001837 401 RGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGG--EEIYI 478 (1007)
Q Consensus 401 ~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g--~~i~i 478 (1007)
+|+|+|.++.+.+. ++.++||++.||+++++...+ ...+|...+ +|+...+++ ..+.+
T Consensus 243 ~~~~~v~~~~~~~~--------------~~~s~hp~~~ai~~~~~~~~~-----~~~~f~~~~-~~~~~~~~~~~~~~~~ 302 (499)
T TIGR01494 243 KNEMSFKKVSVLGG--------------EYLSGHPDERALVKSAKWKIL-----NVFEFSSVR-KRMSVIVRGPDGTYVK 302 (499)
T ss_pred cCceEEEEEEecCC--------------CcCCCChHHHHHHHHhhhcCc-----ceeccCCCC-ceEEEEEecCCcEEEe
Confidence 99999999986532 467899999999999975432 223444445 577777654 67889
Q ss_pred ecHHHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Q 001837 479 GNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE 558 (1007)
Q Consensus 479 g~~~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~ 558 (1007)
|+++++.+.........+.+..+|.++++++.+.+++|++.++|++|++++++|++|+++|++++|+|||++.+|..+|+
T Consensus 303 G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 303 GAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred CCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 99988754321101112234567889999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 559 QLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 559 ~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
++|| +++++|+||.++|+.+|+.| .|+|+|||+||+|||++|||||+|| |+++||++|+++++..++.
T Consensus 383 ~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~ 451 (499)
T TIGR01494 383 ELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVD 451 (499)
T ss_pred HcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHH
Confidence 9997 89999999999999999999 8999999999999999999999996 6899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 001837 638 AIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVG 683 (1007)
Q Consensus 638 lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~ 683 (1007)
++.+||++++++++|+.|+++||++++++++++++ .+.+++..
T Consensus 452 ~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---~~~~~~~~ 494 (499)
T TIGR01494 452 ALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---LNLVPPGL 494 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcch
Confidence 99999999999999999999999999999887653 44444433
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-70 Score=631.11 Aligned_cols=515 Identities=21% Similarity=0.331 Sum_probs=408.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCCCCC
Q 001837 173 AEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGES 249 (1007)
Q Consensus 173 ~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LTGES 249 (1007)
......++..|..+.++++.++.|..+.|+||| ..+.++|||+||+|.++-|++||||.+|+++. ++||+|+|||||
T Consensus 139 tg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGes 218 (1019)
T KOG0203|consen 139 TGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGES 218 (1019)
T ss_pred EecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecceeEecccccccc
Confidence 344555677888899999999999999999999 78999999999999999999999999999997 999999999999
Q ss_pred eeeEecC----------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHH
Q 001837 250 YPVSKQK----------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFI 319 (1007)
Q Consensus 250 ~Pv~K~~----------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~i 319 (1007)
.|..+.+ .|+-|.+|..++|.++++|++||.+|.+|+|+.+...-...++|+++.++++..+++...+++
T Consensus 219 EP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~ 298 (1019)
T KOG0203|consen 219 EPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFL 298 (1019)
T ss_pred CCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHH
Confidence 9999865 478899999999999999999999999999999988888899999999999999999888888
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCcccc
Q 001837 320 SACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTI 399 (1007)
Q Consensus 320 a~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTL 399 (1007)
++.+|.+....+ ..+..++.+.+.++++.+|.+|+..+++.+....++|+++++++|+++++|+||...+||.||||||
T Consensus 299 ~i~fF~~~~~~g-y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTl 377 (1019)
T KOG0203|consen 299 GISFFILALILG-YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 377 (1019)
T ss_pred HHHHHHHHHhhc-chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeE
Confidence 888887766665 4666677779999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEeecCCCCC------------------CHHHHHHHHHhhh----------------hcCCChHHHHHHHHhh
Q 001837 400 TRGEFVMSEFQPLSEDI------------------NLNTLLYWVSSIE----------------SKSSHPMSAALVEYGR 445 (1007)
Q Consensus 400 T~g~~~v~~i~~~~~~~------------------~~~~lL~~~asle----------------~~s~hPi~~AIv~~a~ 445 (1007)
|+|.|+|..+|....-. ...++++.+.... .-.+++.+.||++|+.
T Consensus 378 TqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e 457 (1019)
T KOG0203|consen 378 TQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE 457 (1019)
T ss_pred EecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH
Confidence 99999999988643211 0122222222110 1247899999999885
Q ss_pred hCCCCC--CCCCcccceeccCCc-----eEEE-----ECCEEEE--EecHHHHHHh------------------------
Q 001837 446 SLSIEP--KPEDVEDYQNFPGEG-----IYGK-----IGGEEIY--IGNRKIAQRA------------------------ 487 (1007)
Q Consensus 446 ~~~i~~--~~~~~~~~~~~~g~G-----i~~~-----i~g~~i~--ig~~~~~~~~------------------------ 487 (1007)
-..-.. -........++|.+. +.-. .+.+.+. -|.++...+.
T Consensus 458 ~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~a 537 (1019)
T KOG0203|consen 458 LILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEA 537 (1019)
T ss_pred HhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHH
Confidence 321110 000000111111111 0000 0011111 1222221110
Q ss_pred -------CCC-------CCCCcCCcCCCCCeE-----EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCC
Q 001837 488 -------GCG-------TVPSVDGPKMKGNTI-----GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD 548 (1007)
Q Consensus 488 -------~~~-------~~~~~~~~~~~g~~~-----i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD 548 (1007)
|.+ ..++. ....+..+ .+--.++.|+|++++.||||..+++++..||.+|||++|+|||
T Consensus 538 y~~lg~~GerVlgF~~~~l~~~--~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgd 615 (1019)
T KOG0203|consen 538 YLELGGLGERVLGFCDLELPDE--KFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 615 (1019)
T ss_pred HHHhhhcchHHHHHHHHhcchh--cCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecC
Confidence 000 00100 00011110 1112467899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCcc---------------------------------------------------eEEeccCHhHHH
Q 001837 549 NQSAAMQAQEQLGNALN---------------------------------------------------VVHSELLPEDKA 577 (1007)
Q Consensus 549 ~~~tA~~vA~~lGI~~~---------------------------------------------------~V~ar~sPeqK~ 577 (1007)
++.||.++|++.||..+ .||||.+|+||+
T Consensus 616 hpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKL 695 (1019)
T KOG0203|consen 616 HPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKL 695 (1019)
T ss_pred ccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceE
Confidence 99999999999997542 699999999999
Q ss_pred HHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001837 578 KIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVS 656 (1007)
Q Consensus 578 ~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~a 656 (1007)
.||+..|++| .|+.+|||+||+||||.||||||||++|+++++++||+||+||||.+|+..+++||-+|.|+||.|+|.
T Consensus 696 iIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYT 775 (1019)
T KOG0203|consen 696 IIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYT 775 (1019)
T ss_pred EeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHH
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----HHHHHHhhhHHH-------HHHHHHHHHHHHHHHH
Q 001837 657 IATKAG----IIALALGGHPLV-------WAAVLADVGTCLIVIL 690 (1007)
Q Consensus 657 l~~ni~----~i~la~~g~~~~-------~~ail~~~~s~l~vvl 690 (1007)
++.|+- ++++.++|+|+| .+.+..|+.+++.+..
T Consensus 776 LTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 776 LTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred HHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 999985 556666787653 3444455555555443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-68 Score=597.54 Aligned_cols=588 Identities=21% Similarity=0.312 Sum_probs=455.7
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+.+-+...+|+|+..++..+.+. -|+.+|+.|+.|+.-.+.+..+ .|+++--
T Consensus 41 E~~eRlk~fG~NkleEkken~~l---------KFl~Fm~~PlswVMEaAAimA~---------~Lang~~---------- 92 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKFL---------KFLGFMWNPLSWVMEAAAIMAI---------GLANGGG---------- 92 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHHH---------HHHHHHhchHHHHHHHHHHHHH---------HHhcCCC----------
Confidence 33445566788877765555543 3677889999998765544321 1222110
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
---+|.+.+.|+.+++++..+...+++.+-.....|+.....++.|+||| .++++.+|||||||.++.|++|||
T Consensus 93 ----~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPa 168 (942)
T KOG0205|consen 93 ----RPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPA 168 (942)
T ss_pred ----CCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecC
Confidence 00267888888888888888888888888889999999888999999999 799999999999999999999999
Q ss_pred cEEEEece-eeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHH
Q 001837 230 DGIVVDGK-CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF 308 (1007)
Q Consensus 230 DgiVl~G~-~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i 308 (1007)
|++|++|+ +.||+|+|||||.||.|.+|+.+|+||.+.+|++.++|++||..|++||-+.++.. ......+|+-++.+
T Consensus 169 DaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 169 DARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGI 247 (942)
T ss_pred ccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhh
Confidence 99999998 99999999999999999999999999999999999999999999999999999987 67788999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCc
Q 001837 309 SQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKV 388 (1007)
Q Consensus 309 ~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~v 388 (1007)
.++....+.+..++..++.+..............+.+++..+|.++|..+++.++.+..+|+++|.++|...++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 98876554444333333333333222222234445555556999999999999999999999999999999999999999
Q ss_pred cEEEecCccccccCceEEEE--eecCCCCCCHHHHHHHHHhh-hhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCC
Q 001837 389 RFMAFDKTGTITRGEFVMSE--FQPLSEDINLNTLLYWVSSI-ESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGE 465 (1007)
Q Consensus 389 d~I~fDKTGTLT~g~~~v~~--i~~~~~~~~~~~lL~~~asl-e~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~ 465 (1007)
|++|.|||||||.|+++|.+ +..+.+..+.++++-.++.. .....+.+++|++....... .....+.+....|.+
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPK--eara~ikevhF~PFn 405 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPK--EARAGIKEVHFLPFN 405 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHH--HHhhCceEEeeccCC
Confidence 99999999999999999988 54455667777776555433 34567899999999875421 001112222233333
Q ss_pred ce----EEEE---CCEE--EEEecHHHHHHhCCCC--C-----CCcCCcCCCCCeEEEEEEC-------------CEEEE
Q 001837 466 GI----YGKI---GGEE--IYIGNRKIAQRAGCGT--V-----PSVDGPKMKGNTIGYIFSG-------------ASPVG 516 (1007)
Q Consensus 466 Gi----~~~i---~g~~--i~ig~~~~~~~~~~~~--~-----~~~~~~~~~g~~~i~v~~d-------------~~~lG 516 (1007)
-+ ..++ +|+. ..-|.+.+.-...-.. + ..++++..+|.+-+.+++. -+|+|
T Consensus 406 PV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~g 485 (942)
T KOG0205|consen 406 PVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVG 485 (942)
T ss_pred ccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccc
Confidence 22 2222 3433 3457776642221111 1 1245666677766666532 27899
Q ss_pred EEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------eEE
Q 001837 517 IFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------VVH 568 (1007)
Q Consensus 517 li~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------~V~ 568 (1007)
+.-+-||||.+..++|.+....|++|.|+|||....+...++++|+-.+ .=|
T Consensus 486 llp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgf 565 (942)
T KOG0205|consen 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGF 565 (942)
T ss_pred ccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCc
Confidence 9999999999999999999999999999999999999999999997543 348
Q ss_pred eccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHH
Q 001837 569 SELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHW 647 (1007)
Q Consensus 569 ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~ 647 (1007)
|.+.|++|.++|+.||++| .++|+|||+||+|||+.||+||++. .++++|+.++|+||+++.++.+..++..+|.+|+
T Consensus 566 AgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfq 644 (942)
T KOG0205|consen 566 AGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (942)
T ss_pred cccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999 8999999999999999999999997 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001837 648 KVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696 (1007)
Q Consensus 648 ~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll 696 (1007)
+++.+..|++...+-++ +.++-+.+.|-.-+......++.++|.-..+
T Consensus 645 rmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd~t~m 692 (942)
T KOG0205|consen 645 RMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILNDGTIM 692 (942)
T ss_pred HHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcCCceE
Confidence 99999998887776544 3333344555554544455566777755544
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-64 Score=645.18 Aligned_cols=551 Identities=17% Similarity=0.215 Sum_probs=408.4
Q ss_pred HHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 103 ISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASH 182 (1007)
Q Consensus 103 isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~ 182 (1007)
..+++.|..+..+++++..++...|.+.. . -....++..++++++..+.+++|++.++
T Consensus 19 ~~l~~qf~~~~N~yfl~i~ilq~ip~~s~-----------~-----------~~~t~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 19 KNLFEQFKRFANLYFLVVALLQQVPILSP-----------T-----------YRGTSIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHcCCCcCC-----------C-----------CccHhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34566666677776666666655542210 0 0011223334455677889999999999
Q ss_pred HHHHHHHHhhccCCcceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEe-----ceeeeecccCCCCCeeeEe
Q 001837 183 KATAVMSSLMSIAPQKAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-----GKCEVDEKTLTGESYPVSK 254 (1007)
Q Consensus 183 k~~~~l~~L~~~~p~~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-----G~~~VDES~LTGES~Pv~K 254 (1007)
++++.++ +..++|+|+ | ++|+++||+|||+|.|++||+||||++|++ |.+.||||.|||||.|+.|
T Consensus 77 ~~d~~~n------~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k 150 (1057)
T TIGR01652 77 RRDKEVN------NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLR 150 (1057)
T ss_pred HhHHHHh------CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEe
Confidence 9887653 467888886 5 789999999999999999999999999997 6799999999999999998
Q ss_pred cC------------------------------------------------CCeeeeceEEee-eeEEEEEEEEecceEEe
Q 001837 255 QK------------------------------------------------GSTVWAGTINLN-GYISVETTAVAEDCVVA 285 (1007)
Q Consensus 255 ~~------------------------------------------------g~~V~aGT~v~~-G~~~~~V~~tG~~T~~g 285 (1007)
.+ .|++|+||.+.+ |.++++|++||.+|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~ 230 (1057)
T TIGR01652 151 QALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLM 230 (1057)
T ss_pred ecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhh
Confidence 53 156789999998 99999999999999765
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCC----ch---------------hHHHHHHhhhh
Q 001837 286 KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVS----NH---------------KQWFHLALVVL 346 (1007)
Q Consensus 286 ki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~----~~---------------~~~~~~al~vL 346 (1007)
+ +....+.+++++++.++++..++..+.++++++.+++..++... .+ ...+.+++.++
T Consensus 231 ~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 R---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred h---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 5 34445667899999999999988877777777666654332210 11 11355778888
Q ss_pred hhhccccchhhHHHHHHHHH------HHHHHc----CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC
Q 001837 347 VSACPCALILSTPVVTYCAL------TKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI 416 (1007)
Q Consensus 347 v~a~P~aL~l~i~la~~~a~------~~lak~----gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~ 416 (1007)
..++|.+|++++.++..... .+|.++ ++++|+.+.+|+||+|++||+|||||||+|+|++.++...+..+
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 89999999999999999888 677764 59999999999999999999999999999999999986422100
Q ss_pred C---------------------------------------------------HHHHHHHHHhh-----h----------h
Q 001837 417 N---------------------------------------------------LNTLLYWVSSI-----E----------S 430 (1007)
Q Consensus 417 ~---------------------------------------------------~~~lL~~~asl-----e----------~ 430 (1007)
. ..+++..++.. + +
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 0 01122222111 1 1
Q ss_pred cCCChHHHHHHHHhhhCCCCCCCCC-------------cccce---eccC----CceEEEE---CCE--EEEEecHHHHH
Q 001837 431 KSSHPMSAALVEYGRSLSIEPKPED-------------VEDYQ---NFPG----EGIYGKI---GGE--EIYIGNRKIAQ 485 (1007)
Q Consensus 431 ~s~hPi~~AIv~~a~~~~i~~~~~~-------------~~~~~---~~~g----~Gi~~~i---~g~--~i~ig~~~~~~ 485 (1007)
.+++|+|.|++++++..|+...... ...++ .+|. +.+...+ +++ .+.-|.++.+.
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 2579999999999988876421100 01111 1111 1122222 222 22346654432
Q ss_pred Hh-CCC-------CCCCcCCcCCCCCeEEEE--------------------------------------EECCEEEEEEE
Q 001837 486 RA-GCG-------TVPSVDGPKMKGNTIGYI--------------------------------------FSGASPVGIFC 519 (1007)
Q Consensus 486 ~~-~~~-------~~~~~~~~~~~g~~~i~v--------------------------------------~~d~~~lGli~ 519 (1007)
.. ... ....++++..+|.+++.+ +.|++|+|+++
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~g 627 (1057)
T TIGR01652 548 KRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATA 627 (1057)
T ss_pred HHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEE
Confidence 21 100 011134455667666544 35889999999
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------------
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---------------------------------- 565 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---------------------------------- 565 (1007)
++|+||++++++|++|+++||++||+|||+++||.+||+++|+..+
T Consensus 628 ieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~ 707 (1057)
T TIGR01652 628 IEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFN 707 (1057)
T ss_pred EhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999997420
Q ss_pred --------------------------------------eEEeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhC
Q 001837 566 --------------------------------------VVHSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATA 605 (1007)
Q Consensus 566 --------------------------------------~V~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~A 605 (1007)
.||||++|+||.+||+.+|+. | .|+|+|||+||+|||++|
T Consensus 708 ~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~A 787 (1057)
T TIGR01652 708 NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEA 787 (1057)
T ss_pred hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhc
Confidence 389999999999999999998 8 899999999999999999
Q ss_pred CeeEEeCCCCcH--HHHhhcCEEEecCCcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Q 001837 606 DIGISMGISGSA--LATETGQVILMSNDIRKVPEAI-RLARKAHWKVIENIAVSIATKAGIIALALGG------------ 670 (1007)
Q Consensus 606 DVGIAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI-~~gR~~~~~i~~ni~~al~~ni~~i~la~~g------------ 670 (1007)
||||++ .|.+ .|+.+||++|. +|+.|.+++ .+||+.|+++.+.+.|.++.|++++++.++.
T Consensus 788 dVGIgi--~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~ 863 (1057)
T TIGR01652 788 DVGVGI--SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLY 863 (1057)
T ss_pred CeeeEe--cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 999987 4555 68999999995 699999988 7799999999999999999998754443321
Q ss_pred --hHHHHHHHHHHHHHHHHH
Q 001837 671 --HPLVWAAVLADVGTCLIV 688 (1007)
Q Consensus 671 --~~~~~~ail~~~~s~l~v 688 (1007)
++.+|.+++++.++++++
T Consensus 864 ~~~~l~~~n~~~t~lp~~~l 883 (1057)
T TIGR01652 864 EGWYMVLYNVFFTALPVISL 883 (1057)
T ss_pred HHHHHHHHHHHHHhHHHHHH
Confidence 124566677777776666
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-64 Score=589.71 Aligned_cols=532 Identities=21% Similarity=0.266 Sum_probs=408.4
Q ss_pred HHHHHHcCcccHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEe
Q 001837 132 GLAAIRNFKLDINILVLIA-VIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEV 208 (1007)
Q Consensus 132 a~~~l~~~~l~i~~Li~ia-~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V 208 (1007)
-++.+-+-.++...+..+. +++|+.-++|+++..|+++..++..+..+..++....++++... +..++|+|+| ++|
T Consensus 185 i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~~ti 263 (1140)
T KOG0208|consen 185 ISQILVKEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFWETV 263 (1140)
T ss_pred HHHHHHHhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEEEEE
Confidence 3444555556666555444 44555556677778888888999999999999999999887763 4788999999 899
Q ss_pred eCCCcccCcEEEEeC-CCcccccEEEEeceeeeecccCCCCCeeeEecC-------------------CCeeeeceEEee
Q 001837 209 DAGEVKLNTVLAVKA-GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK-------------------GSTVWAGTINLN 268 (1007)
Q Consensus 209 ~~~dLv~GDIV~L~~-Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~-------------------g~~V~aGT~v~~ 268 (1007)
+++|||||||+++.+ +-..|||++|++|++.||||+|||||.|+.|.+ .+++|.||.+++
T Consensus 264 ~S~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq 343 (1140)
T KOG0208|consen 264 DSSELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQ 343 (1140)
T ss_pred eccccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEE
Confidence 999999999999999 999999999999999999999999999999965 368999999997
Q ss_pred ------eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 001837 269 ------GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLA 342 (1007)
Q Consensus 269 ------G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~a 342 (1007)
+.+.+.|+|||.+|.-|++.+.+..++.....+.+...+|...+..+.++..+..++. +.....+....+.++
T Consensus 344 ~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~~~~~iiirs 422 (1140)
T KOG0208|consen 344 ARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGVPLKTIIIRS 422 (1140)
T ss_pred eecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCCCHHHHhhhh
Confidence 6699999999999999999999998777666666666666655544433333333333 223335778889999
Q ss_pred hhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCH----
Q 001837 343 LVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL---- 418 (1007)
Q Consensus 343 l~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~---- 418 (1007)
+.++.+.+|+|||.++++...++.+||.|+||++.+|..+...|++|++|||||||||++.+.+-.+.+....-+.
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~ 502 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPEL 502 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998875432110
Q ss_pred -----------------------HHHHHHHHhhh-------hcCCChHHHHHHHHhhhCC---------------CCCCC
Q 001837 419 -----------------------NTLLYWVSSIE-------SKSSHPMSAALVEYGRSLS---------------IEPKP 453 (1007)
Q Consensus 419 -----------------------~~lL~~~asle-------~~s~hPi~~AIv~~a~~~~---------------i~~~~ 453 (1007)
..+.+..+... ...++|++..+.+.....- +.+..
T Consensus 503 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v 582 (1140)
T KOG0208|consen 503 KVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTV 582 (1140)
T ss_pred hhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCE
Confidence 01111122111 1245677665554321100 00000
Q ss_pred CCccc--cee--ccCC---ce---------------EEEECC----EEEEEecHHHHHHhCC-CCCCC-----cCCcCCC
Q 001837 454 EDVED--YQN--FPGE---GI---------------YGKIGG----EEIYIGNRKIAQRAGC-GTVPS-----VDGPKMK 501 (1007)
Q Consensus 454 ~~~~~--~~~--~~g~---Gi---------------~~~i~g----~~i~ig~~~~~~~~~~-~~~~~-----~~~~~~~ 501 (1007)
..+.. +.. ..+. ++ .....+ ..+.-|+++.+.+... +..|. ++.+..+
T Consensus 583 ~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~ 662 (1140)
T KOG0208|consen 583 VRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQ 662 (1140)
T ss_pred eCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhC
Confidence 00000 000 0011 11 111111 2344588888755432 22332 4567778
Q ss_pred CCeEEEEE---------------------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 502 GNTIGYIF---------------------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 502 g~~~i~v~---------------------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
|.+++.++ .|++|+|+|.|++++|+.++.+|++|++++||++|+||||..||..|||++
T Consensus 663 GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 663 GFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred CeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 88887765 578999999999999999999999999999999999999999999999999
Q ss_pred CCCcc---------------------------------------------------------------------------
Q 001837 561 GNALN--------------------------------------------------------------------------- 565 (1007)
Q Consensus 561 GI~~~--------------------------------------------------------------------------- 565 (1007)
||..+
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l 822 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPEL 822 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHH
Confidence 98753
Q ss_pred --------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHH
Q 001837 566 --------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 566 --------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~ 636 (1007)
.|||||+|+||.++|+.||+.| .|+|+|||+||+.|||+||||||++.+ .|.-+|.+.---.+++.++
T Consensus 823 ~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 823 VPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHh
Confidence 6999999999999999999999 999999999999999999999999632 3445577766556999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 637 EAIRLARKAHWKVIENIAVSIATKAGIIALAL 668 (1007)
Q Consensus 637 ~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~ 668 (1007)
.+|++||..+-+-..-+.|...|.++.....+
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~ 931 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVV 931 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998888887544433
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-61 Score=531.89 Aligned_cols=473 Identities=29% Similarity=0.396 Sum_probs=389.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCc-ceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccC
Q 001837 170 FTIAEWLESRASHKATAVMSSLMSIAPQ-KAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTL 245 (1007)
Q Consensus 170 ~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~L 245 (1007)
.++..+-|..++.|....-.+|+..... .++++++ | +.|++.+|+.||+|+|++||+||.||.|++|.+.||||.+
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAI 155 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAI 155 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhc
Confidence 3566777777777777777777664433 4555554 5 8999999999999999999999999999999999999999
Q ss_pred CCCCeeeEecCC---CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHH
Q 001837 246 TGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISAC 322 (1007)
Q Consensus 246 TGES~Pv~K~~g---~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l 322 (1007)
||||.||.|++| +.|-.||.|++..++++++....+|++.||..+++.++++|+|.+-.+.-+..-++.++++..+.
T Consensus 156 TGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~T 235 (681)
T COG2216 156 TGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVAT 235 (681)
T ss_pred cCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 88999999999999999999999999999999999999999999988877766655544433322
Q ss_pred HHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccC
Q 001837 323 VAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRG 402 (1007)
Q Consensus 323 ~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g 402 (1007)
++-+..+.+ .....+...+++++..+|-.++-.++-.-..++.|+.+.+++-++++++|..|.+|+++.|||||+|-|
T Consensus 236 l~p~a~y~~--g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~G 313 (681)
T COG2216 236 LYPFAIYSG--GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLG 313 (681)
T ss_pred hhhHHHHcC--CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeec
Confidence 222222221 111224566788899999998888888888899999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcc-cceeccC------CceEEEECCEE
Q 001837 403 EFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVE-DYQNFPG------EGIYGKIGGEE 475 (1007)
Q Consensus 403 ~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~-~~~~~~g------~Gi~~~i~g~~ 475 (1007)
+-.-.++.+.+. .+.+++...+....-.-+.|..++|++.+++.++........ ..+.+|. .|+.. -++++
T Consensus 314 nR~A~~f~p~~g-v~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~-~~~~~ 391 (681)
T COG2216 314 NRQASEFIPVPG-VSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL-PGGRE 391 (681)
T ss_pred chhhhheecCCC-CCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC-CCCce
Confidence 999999998764 677777666554444567899999999999988664333222 1222222 12211 13467
Q ss_pred EEEecHHHHHH----hCCCCCC----CcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcC
Q 001837 476 IYIGNRKIAQR----AGCGTVP----SVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547 (1007)
Q Consensus 476 i~ig~~~~~~~----~~~~~~~----~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG 547 (1007)
++-|..+-+.+ .+-...+ ..++.+..|.+++.+..|++++|+|.++|-++|+.+|-+.+||++|||++|+||
T Consensus 392 irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TG 471 (681)
T COG2216 392 IRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITG 471 (681)
T ss_pred eecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 88888654422 2222111 134566789999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEE
Q 001837 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626 (1007)
Q Consensus 548 D~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiV 626 (1007)
||+.||..||++.|++ ...|+.+||+|.++|+.-|.+| .|+|+|||+||+|||++||||+||. +|+++|+|++.+|
T Consensus 472 DN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMV 548 (681)
T COG2216 472 DNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMV 548 (681)
T ss_pred CCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhccc
Confidence 9999999999999999 9999999999999999999999 8999999999999999999999997 9999999999999
Q ss_pred EecCCcchHHHHHHHHHHHHHHH
Q 001837 627 LMSNDIRKVPEAIRLARKAHWKV 649 (1007)
Q Consensus 627 Ll~~~l~~I~~lI~~gR~~~~~i 649 (1007)
=+|+|+..+.+.+..|++..-+-
T Consensus 549 DLDS~PTKlievV~IGKqlLiTR 571 (681)
T COG2216 549 DLDSNPTKLIEVVEIGKQLLITR 571 (681)
T ss_pred ccCCCccceehHhhhhhhheeec
Confidence 99999999999999999876443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-58 Score=584.33 Aligned_cols=495 Identities=16% Similarity=0.188 Sum_probs=366.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe--
Q 001837 160 YIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-- 235 (1007)
Q Consensus 160 y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-- 235 (1007)
+...++++++.++++++|++.++|+++.++ +..++|+++| +++++++|+|||+|.|++||+||||++|++
T Consensus 140 ~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss 213 (1178)
T PLN03190 140 ILPLAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTS 213 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEecc
Confidence 345566777888999999999999998764 4678888888 789999999999999999999999999997
Q ss_pred ---ceeeeecccCCCCCeeeEecCC---------------------------------------------CeeeeceEEe
Q 001837 236 ---GKCEVDEKTLTGESYPVSKQKG---------------------------------------------STVWAGTINL 267 (1007)
Q Consensus 236 ---G~~~VDES~LTGES~Pv~K~~g---------------------------------------------~~V~aGT~v~ 267 (1007)
|.+.|||+.|||||.|+.|.++ +++++|+.+.
T Consensus 214 ~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lr 293 (1178)
T PLN03190 214 DPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELK 293 (1178)
T ss_pred CCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceec
Confidence 8899999999999999999542 3455555555
Q ss_pred e-eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhc--CCc----------
Q 001837 268 N-GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALG--VSN---------- 334 (1007)
Q Consensus 268 ~-G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~--~~~---------- 334 (1007)
+ ..++++|++||.+|. ++.....++.+.+++++.++++..+++.+.++++++++++..++. ..+
T Consensus 294 nT~~i~GvVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~ 370 (1178)
T PLN03190 294 NTAWAIGVAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRR 370 (1178)
T ss_pred CCceEEEEEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Confidence 5 359999999999995 444444456788999999999999888877777766665532210 000
Q ss_pred ------------h----hH-H--HHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcC----------Ccccchhhhhhc
Q 001837 335 ------------H----KQ-W--FHLALVVLVSACPCALILSTPVVTYCALTKAATSG----------LLIKGGDYLQTL 385 (1007)
Q Consensus 335 ------------~----~~-~--~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~g----------ilvk~~~~lE~L 385 (1007)
. .. . +..++.++...+|.+|++++.++.......+.++. +.+|+.+..|+|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeL 450 (1178)
T PLN03190 371 KDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDL 450 (1178)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhh
Confidence 0 01 1 22234555588999999999999977666666543 779999999999
Q ss_pred cCccEEEecCccccccCceEEEEeecCCCCC-------------------------------------------C-----
Q 001837 386 AKVRFMAFDKTGTITRGEFVMSEFQPLSEDI-------------------------------------------N----- 417 (1007)
Q Consensus 386 g~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~-------------------------------------------~----- 417 (1007)
|+|++|++|||||||+|+|++.++...+..+ +
T Consensus 451 GqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (1178)
T PLN03190 451 GQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAK 530 (1178)
T ss_pred ccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhH
Confidence 9999999999999999999999875421000 0
Q ss_pred -HHHHHHHHHhh-------------------hhcCCChHHHHHHHHhhhCCCCCCCC-----------Ccccce---ecc
Q 001837 418 -LNTLLYWVSSI-------------------ESKSSHPMSAALVEYGRSLSIEPKPE-----------DVEDYQ---NFP 463 (1007)
Q Consensus 418 -~~~lL~~~asl-------------------e~~s~hPi~~AIv~~a~~~~i~~~~~-----------~~~~~~---~~~ 463 (1007)
..+++..++.+ ++.+++|.|.||+.+|...|+..... ....++ .++
T Consensus 531 ~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~p 610 (1178)
T PLN03190 531 HVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHE 610 (1178)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEec
Confidence 01122222211 13345899999999999988631100 011111 111
Q ss_pred C----CceEEEE---CCEE--EEEecHHHHHHhCCCC---------CCCcCCcCCCCCeEEE------------------
Q 001837 464 G----EGIYGKI---GGEE--IYIGNRKIAQRAGCGT---------VPSVDGPKMKGNTIGY------------------ 507 (1007)
Q Consensus 464 g----~Gi~~~i---~g~~--i~ig~~~~~~~~~~~~---------~~~~~~~~~~g~~~i~------------------ 507 (1007)
. +.+...+ ++.. +.-|.++.+....-.. ...+++++.+|.+++.
T Consensus 611 F~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~ 690 (1178)
T PLN03190 611 FDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF 690 (1178)
T ss_pred ccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHH
Confidence 1 1122222 1221 2235444331110000 0112233344444332
Q ss_pred --------------------EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---
Q 001837 508 --------------------IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--- 564 (1007)
Q Consensus 508 --------------------v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--- 564 (1007)
++.|++++|+++++|++|++++++|++|+++||++||+|||+..||.+||+++||..
T Consensus 691 ~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~ 770 (1178)
T PLN03190 691 EAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKM 770 (1178)
T ss_pred HHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCC
Confidence 457899999999999999999999999999999999999999999999999776520
Q ss_pred ----------------------------------------------c-------------------------------eE
Q 001837 565 ----------------------------------------------N-------------------------------VV 567 (1007)
Q Consensus 565 ----------------------------------------------~-------------------------------~V 567 (1007)
+ .|
T Consensus 771 ~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI 850 (1178)
T PLN03190 771 TQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVL 850 (1178)
T ss_pred eeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEE
Confidence 0 37
Q ss_pred EeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEEeCCCCcH--HHHhhcCEEEecCCcchHHHHHH-HH
Q 001837 568 HSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATADIGISMGISGSA--LATETGQVILMSNDIRKVPEAIR-LA 642 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI~-~g 642 (1007)
|||++|+||++||+.+|+. + .|+|+|||+||++||++|||||++ +|.+ .|..+||+++ ..|+-|.+|+. .|
T Consensus 851 ~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI--sG~EG~qA~~aSDfaI--~~Fr~L~rLLlvHG 926 (1178)
T PLN03190 851 CCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMASDFAM--GQFRFLVPLLLVHG 926 (1178)
T ss_pred EecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee--cCchhHHHHHhhccch--hhhHHHHHHHHHhC
Confidence 9999999999999999997 4 799999999999999999999976 5665 8999999999 78999999887 59
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 643 RKAHWKVIENIAVSIATKAGIIALA 667 (1007)
Q Consensus 643 R~~~~~i~~ni~~al~~ni~~i~la 667 (1007)
|..|+++.+-+.|.+.-|+++.+..
T Consensus 927 r~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 927 HWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-53 Score=485.28 Aligned_cols=471 Identities=19% Similarity=0.235 Sum_probs=343.7
Q ss_pred HcCcccHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCc
Q 001837 137 RNFKLDINILVLIAVIGTIAMNDYIEA-GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEV 213 (1007)
Q Consensus 137 ~~~~l~i~~Li~ia~~~~~~~~~y~~a-~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dL 213 (1007)
+.......+...++..+.|.+.+|++. .+-+|+++.-+.--.+++.++...+++ |...|..+.|.|++ +.+.++||
T Consensus 193 kE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeL 271 (1160)
T KOG0209|consen 193 KEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEEL 271 (1160)
T ss_pred HHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceecccccc
Confidence 333334444445556666666665554 445555555555556667777777766 44578888999988 88999999
Q ss_pred ccCcEEEEeC---CCcccccEEEEeceeeeecccCCCCCeeeEecC-----------------CCeeeeceEEee-----
Q 001837 214 KLNTVLAVKA---GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK-----------------GSTVWAGTINLN----- 268 (1007)
Q Consensus 214 v~GDIV~L~~---Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~-----------------g~~V~aGT~v~~----- 268 (1007)
.|||+|.|.. ...||||.+|++|++.|||++|||||.|..|.+ ...+|+||++++
T Consensus 272 lPgDvVSI~r~~ed~~vPCDllLL~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~ 351 (1160)
T KOG0209|consen 272 LPGDVVSIGRGAEDSHVPCDLLLLRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPK 351 (1160)
T ss_pred CCCceEEeccCcccCcCCceEEEEecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCc
Confidence 9999999998 678999999999999999999999999999964 357899999985
Q ss_pred --------eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCch----h
Q 001837 269 --------GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNH----K 336 (1007)
Q Consensus 269 --------G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~----~ 336 (1007)
|-+.+.|++||.+|..|++.+.+....++-+...+ -+.+|..++++++++.+...|.-+..+. .
T Consensus 352 ~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~----Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrY 427 (1160)
T KOG0209|consen 352 KASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR----ETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRY 427 (1160)
T ss_pred cccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH----HHHHHHHHHHHHHHHhhheEEEecccCcchhhh
Confidence 66889999999999999999887765444443222 2234444455555555555555553332 2
Q ss_pred HHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC
Q 001837 337 QWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI 416 (1007)
Q Consensus 337 ~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~ 416 (1007)
..+.-.+.+|...+|.-||+-+++++-.++..|+|.||+|..|-.+.-.|++|+.|||||||||+..|.|.++.....+.
T Consensus 428 KL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~ 507 (1160)
T KOG0209|consen 428 KLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE 507 (1160)
T ss_pred heeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc
Confidence 33555677888889999999999999999999999999999999999999999999999999999999999987643321
Q ss_pred C--------HHHHHHHHHh------hh-hcCCChHHHHHHHHhhhCCCCCC-----CCCcccceeccC---------Cce
Q 001837 417 N--------LNTLLYWVSS------IE-SKSSHPMSAALVEYGRSLSIEPK-----PEDVEDYQNFPG---------EGI 467 (1007)
Q Consensus 417 ~--------~~~lL~~~as------le-~~s~hPi~~AIv~~a~~~~i~~~-----~~~~~~~~~~~g---------~Gi 467 (1007)
. +.+.+..+++ +| ...++|+++|.++...+.--..+ .......+.+.. ..+
T Consensus 508 ~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsv 587 (1160)
T KOG0209|consen 508 GALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSV 587 (1160)
T ss_pred ccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHh
Confidence 0 1222222222 23 45789999999998743211110 000001111100 001
Q ss_pred EEEECC----EEE---EEecHHHHHHhC----CCCCCCcCCcCCCCCeEEEE---------------------EECCEEE
Q 001837 468 YGKIGG----EEI---YIGNRKIAQRAG----CGTVPSVDGPKMKGNTIGYI---------------------FSGASPV 515 (1007)
Q Consensus 468 ~~~i~g----~~i---~ig~~~~~~~~~----~~~~~~~~~~~~~g~~~i~v---------------------~~d~~~l 515 (1007)
.+...+ ..+ .-|.++..+..- .++.....++.++|.+++.+ +.|++|.
T Consensus 588 va~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFa 667 (1160)
T KOG0209|consen 588 VASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFA 667 (1160)
T ss_pred hhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceee
Confidence 111111 111 125555432211 11112234456667666554 4688999
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------------
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------ 565 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------ 565 (1007)
|++.|.-|+|+|++++|++|.+.+.+++|+||||+.||.+||+++||...
T Consensus 668 GFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~ 747 (1160)
T KOG0209|consen 668 GFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLK 747 (1160)
T ss_pred eeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCC
Confidence 99999999999999999999999999999999999999999999998532
Q ss_pred -------------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCe
Q 001837 566 -------------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 566 -------------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADV 607 (1007)
.||||+.|.||..||..||+.| .++|+|||+||+.||++|||
T Consensus 748 p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhV 827 (1160)
T KOG0209|consen 748 PGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHV 827 (1160)
T ss_pred CCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhccc
Confidence 5899999999999999999999 89999999999999999999
Q ss_pred eEEeC
Q 001837 608 GISMG 612 (1007)
Q Consensus 608 GIAmg 612 (1007)
|||+-
T Consensus 828 GVALL 832 (1160)
T KOG0209|consen 828 GVALL 832 (1160)
T ss_pred ceehh
Confidence 99985
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=459.20 Aligned_cols=492 Identities=17% Similarity=0.246 Sum_probs=366.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC-EEeeCCCcccCcEEEEeCCCcccccEEEEe-
Q 001837 158 NDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG-EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD- 235 (1007)
Q Consensus 158 ~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg-~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~- 235 (1007)
..|...++++++.++.+.+++..+++.++..++ ...-+..|+| ...|+++|++||+|++..+++||||.++++
T Consensus 130 ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns-----e~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrT 204 (1051)
T KOG0210|consen 130 TYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS-----EKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRT 204 (1051)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEc
Confidence 345667778888899999999999988877654 1234556788 566999999999999999999999999994
Q ss_pred ----ceeeeecccCCCCCeeeEecC-----------------------------------------------CCeeeece
Q 001837 236 ----GKCEVDEKTLTGESYPVSKQK-----------------------------------------------GSTVWAGT 264 (1007)
Q Consensus 236 ----G~~~VDES~LTGES~Pv~K~~-----------------------------------------------g~~V~aGT 264 (1007)
|++.|-+-.|+||+....|-| .|++|++|
T Consensus 205 sd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanT 284 (1051)
T KOG0210|consen 205 SDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANT 284 (1051)
T ss_pred cCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeee
Confidence 679999999999997766621 37899999
Q ss_pred EEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhh
Q 001837 265 INLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV 344 (1007)
Q Consensus 265 ~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~ 344 (1007)
+|.+|.+.+.|++||.+|.. .-+...++.+-..++..++-+.+++...+++++++....-- + ..+|..++.+++.
T Consensus 285 VvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-~-~~~wyi~~~Rfll 359 (1051)
T KOG0210|consen 285 VVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-F-GSDWYIYIIRFLL 359 (1051)
T ss_pred eEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-C-CCchHHHHHHHHH
Confidence 99999999999999999842 11222334445567777888888888777777765433211 1 2467788899999
Q ss_pred hhhhhccccchhhHHHHHHHHHHHHHHc----CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCH--
Q 001837 345 VLVSACPCALILSTPVVTYCALTKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL-- 418 (1007)
Q Consensus 345 vLv~a~P~aL~l~i~la~~~a~~~lak~----gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~-- 418 (1007)
++...+|.+|-+-+.++...-.....+. |.++|+...-|.||+|.++.+|||||||+|+|++.++....-.++.
T Consensus 360 LFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~ 439 (1051)
T KOG0210|consen 360 LFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAET 439 (1051)
T ss_pred HHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhH
Confidence 9999999999999999988777666653 7899999999999999999999999999999999988642211111
Q ss_pred ----------------------------------HHHHHHHHh-------------hhhcCCChHHHHHHHHhhhCCCCC
Q 001837 419 ----------------------------------NTLLYWVSS-------------IESKSSHPMSAALVEYGRSLSIEP 451 (1007)
Q Consensus 419 ----------------------------------~~lL~~~as-------------le~~s~hPi~~AIv~~a~~~~i~~ 451 (1007)
.++...++. +.++..+|.+.||+++-+..|+..
T Consensus 440 ~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L 519 (1051)
T KOG0210|consen 440 MDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKL 519 (1051)
T ss_pred HHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEE
Confidence 011111111 123456788888888877666542
Q ss_pred CCCC------------cccce---ecc------CCceEEEEC--CE-EEEEecHHHHHHhCCCC----CCCcCCcCCCCC
Q 001837 452 KPED------------VEDYQ---NFP------GEGIYGKIG--GE-EIYIGNRKIAQRAGCGT----VPSVDGPKMKGN 503 (1007)
Q Consensus 452 ~~~~------------~~~~~---~~~------g~Gi~~~i~--g~-~i~ig~~~~~~~~~~~~----~~~~~~~~~~g~ 503 (1007)
..++ ...|+ .+| ..||..+.+ ++ ...+...+..++.-... .++-.+++++|.
T Consensus 520 ~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGL 599 (1051)
T KOG0210|consen 520 AKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGL 599 (1051)
T ss_pred eecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcc
Confidence 1111 11222 222 235554433 22 23333332221110000 112233445555
Q ss_pred eEEEE---------------------------------------EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEE
Q 001837 504 TIGYI---------------------------------------FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAM 544 (1007)
Q Consensus 504 ~~i~v---------------------------------------~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~m 544 (1007)
+.+.+ ++|++++|+.+++|+++++++.+++.||+||||+||
T Consensus 600 RtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWM 679 (1051)
T KOG0210|consen 600 RTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWM 679 (1051)
T ss_pred eEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEE
Confidence 55544 467899999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCcc----------------------------------------------------------e
Q 001837 545 LTGDNQSAAMQAQEQLGNALN----------------------------------------------------------V 566 (1007)
Q Consensus 545 lTGD~~~tA~~vA~~lGI~~~----------------------------------------------------------~ 566 (1007)
+|||..+||..+|+..++... .
T Consensus 680 LTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aV 759 (1051)
T KOG0210|consen 680 LTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAV 759 (1051)
T ss_pred EcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcE
Confidence 999999999999999987532 6
Q ss_pred EEeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHH-HH
Q 001837 567 VHSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL-AR 643 (1007)
Q Consensus 567 V~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~-gR 643 (1007)
|.+|++|.||+++++.||+. | .|+.+|||-||+.|+++||+||++-......|.-+||+.+ ..|..+.+++.+ ||
T Consensus 760 v~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI--tqF~Hv~rLLl~HGR 837 (1051)
T KOG0210|consen 760 VCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI--TQFSHVSRLLLWHGR 837 (1051)
T ss_pred EEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccH--HHHHHHHHHhhcccc
Confidence 89999999999999999998 6 8999999999999999999999874455567888999999 689999998876 99
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001837 644 KAHWKVIENIAVSIATKA 661 (1007)
Q Consensus 644 ~~~~~i~~ni~~al~~ni 661 (1007)
..|++-.+--+|.+--.+
T Consensus 838 ~SYkrsa~laqfViHRGL 855 (1051)
T KOG0210|consen 838 NSYKRSAKLAQFVIHRGL 855 (1051)
T ss_pred chHHHHHHHHHHHHhhhH
Confidence 999988776666544443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=439.70 Aligned_cols=492 Identities=18% Similarity=0.205 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC---EEeeCCCcccCcEEEEeCCCcccccEEEEe-----
Q 001837 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD----- 235 (1007)
Q Consensus 164 ~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~----- 235 (1007)
.+++.+.++.+.+|++.+++.++.+++ .++.|.+++ +...+.+|++||+|.+..++.+|||.+|++
T Consensus 88 ~~vl~~t~iKd~~eD~rR~~~D~~iN~------~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~ 161 (1151)
T KOG0206|consen 88 LFVLGITAIKDAIEDYRRHKQDKEVNN------RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDED 161 (1151)
T ss_pred eeeehHHHHHHHHhhhhhhhccHHhhc------ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCC
Confidence 456677789999999999999998865 456666643 789999999999999999999999999995
Q ss_pred ceeeeecccCCCCCeeeEecC-----------------------------------------------CCeeeeceEEee
Q 001837 236 GKCEVDEKTLTGESYPVSKQK-----------------------------------------------GSTVWAGTINLN 268 (1007)
Q Consensus 236 G~~~VDES~LTGES~Pv~K~~-----------------------------------------------g~~V~aGT~v~~ 268 (1007)
|.|+|+++.|+||+....|+. .+.++.|+++.+
T Consensus 162 ~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrN 241 (1151)
T KOG0206|consen 162 GICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRN 241 (1151)
T ss_pred ceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceecc
Confidence 459999999999999888732 235677888877
Q ss_pred -eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC-------------Cc
Q 001837 269 -GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGV-------------SN 334 (1007)
Q Consensus 269 -G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~-------------~~ 334 (1007)
-.+.+.|+.+|.+|. ++.....++.+++++++.++++...+.+++++++++..+...+... .+
T Consensus 242 T~~v~G~vv~tG~dtK---~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 318 (1151)
T KOG0206|consen 242 TEWVYGVVVFTGHDTK---LMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS 318 (1151)
T ss_pred CcEEEEEEEEcCCcch---HHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCc
Confidence 448899999999994 4555556888899999999999988888877777776654322211 00
Q ss_pred -----hhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHH----------HcCCcccchhhhhhccCccEEEecCcccc
Q 001837 335 -----HKQWFHLALVVLVSACPCALILSTPVVTYCALTKAA----------TSGLLIKGGDYLQTLAKVRFMAFDKTGTI 399 (1007)
Q Consensus 335 -----~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~la----------k~gilvk~~~~lE~Lg~vd~I~fDKTGTL 399 (1007)
....+..++.++...+|.+|++++.+.......... .....+|..+..|.||+|++|+.||||||
T Consensus 319 ~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTL 398 (1151)
T KOG0206|consen 319 EAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTL 398 (1151)
T ss_pred hHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcc
Confidence 011245677788888999999999998877654332 24678999999999999999999999999
Q ss_pred ccCceEEEEeecCCCCCC----------------------------------------------HHHHHHHHH-------
Q 001837 400 TRGEFVMSEFQPLSEDIN----------------------------------------------LNTLLYWVS------- 426 (1007)
Q Consensus 400 T~g~~~v~~i~~~~~~~~----------------------------------------------~~~lL~~~a------- 426 (1007)
|+|.|++.++.+.+.++. ..+.+..++
T Consensus 399 T~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~ 478 (1151)
T KOG0206|consen 399 TQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIP 478 (1151)
T ss_pred ccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeee
Confidence 999999988754321110 011112221
Q ss_pred -------hhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc-------------------eEEEE---CCEEEE
Q 001837 427 -------SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG-------------------IYGKI---GGEEIY 477 (1007)
Q Consensus 427 -------sle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G-------------------i~~~i---~g~~i~ 477 (1007)
.+.+.+..|.+.|+++.|+..|+............ ...| +...+ +|+.+.
T Consensus 479 e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti-~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~L 557 (1151)
T KOG0206|consen 479 EKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTI-RELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILL 557 (1151)
T ss_pred ccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEE-eccccceeEEEEEEeccccccceeEEEEEcCCCcEEE
Confidence 12455678999999999999987642221111111 1222 11111 122111
Q ss_pred E--ecHH-HHHHhCCC---C----CCCcCCcCCCCCeEE--------------------------------------EEE
Q 001837 478 I--GNRK-IAQRAGCG---T----VPSVDGPKMKGNTIG--------------------------------------YIF 509 (1007)
Q Consensus 478 i--g~~~-~~~~~~~~---~----~~~~~~~~~~g~~~i--------------------------------------~v~ 509 (1007)
. |... +++++... . ...+++++.+|.+.+ .++
T Consensus 558 ycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iE 637 (1151)
T KOG0206|consen 558 YCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIE 637 (1151)
T ss_pred EEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 1 2211 11111100 0 011222333333322 256
Q ss_pred ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-------------------------
Q 001837 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL------------------------- 564 (1007)
Q Consensus 510 ~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~------------------------- 564 (1007)
+|+.++|..++||+++++++++|+.|++||||+||||||..+||.+|+-.|++..
T Consensus 638 k~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~ 717 (1151)
T KOG0206|consen 638 KDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAAL 717 (1151)
T ss_pred hcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHH
Confidence 8999999999999999999999999999999999999999999999998887531
Q ss_pred ----------------------c-------------------------------eEEeccCHhHHHHHHHHHhhC-C-eE
Q 001837 565 ----------------------N-------------------------------VVHSELLPEDKAKIINQFKQE-G-KT 589 (1007)
Q Consensus 565 ----------------------~-------------------------------~V~ar~sPeqK~~iV~~Lq~~-G-~V 589 (1007)
+ ++.+|++|.||+.+|+..++. + .+
T Consensus 718 ~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~T 797 (1151)
T KOG0206|consen 718 KETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVT 797 (1151)
T ss_pred HHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceE
Confidence 1 689999999999999999865 5 89
Q ss_pred EEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 590 AMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR-LARKAHWKVIENIAVSIATKAGIIALA 667 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~-~gR~~~~~i~~ni~~al~~ni~~i~la 667 (1007)
++||||+||++|+++|||||+++..+...|..+||+.+ ..|+-+.+++. .||+.|.++.+.+.|.++.|+.+....
T Consensus 798 LAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 798 LAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred EEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987666678999999998 56777777654 499999999999999999998755443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=307.52 Aligned_cols=220 Identities=27% Similarity=0.461 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc-eEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe-ceeee
Q 001837 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQK-AIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-GKCEV 240 (1007)
Q Consensus 165 ~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~-~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-G~~~V 240 (1007)
+++++++++.+++.++++|+++.++++.+..+.+ +.|.|+| +.|+++||+|||+|.|++||+|||||+|++ |.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888999999999999999999999988887 8899999 899999999999999999999999999999 99999
Q ss_pred ecccCCCCCeeeEec-----CCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHH
Q 001837 241 DEKTLTGESYPVSKQ-----KGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPA 315 (1007)
Q Consensus 241 DES~LTGES~Pv~K~-----~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i 315 (1007)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|.++++.+.+.+.+.+++++++.++++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhh
Q 001837 316 VIFISACVAVIPIA-LGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384 (1007)
Q Consensus 316 ~l~ia~l~~l~~~~-~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~ 384 (1007)
++++++++++++++ ....++...+..+++++++++|++|++++|++...++.++.++|+++|+++++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 98888887766554 2345677788999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=262.35 Aligned_cols=207 Identities=34% Similarity=0.556 Sum_probs=172.6
Q ss_pred ccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCce
Q 001837 388 VRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGI 467 (1007)
Q Consensus 388 vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi 467 (1007)
|++||||||||||++++.+ .. +....++.++...+..+.||++.+++.++....... . ...+...++.|+
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 70 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWSK--S-LESFSEFIGRGI 70 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHHS--C-CEEEEEETTTEE
T ss_pred CeEEEEecCCCcccCeEEE---Ee----ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccchh--h-hhhheeeeeccc
Confidence 6899999999999999999 11 567888899999999999999999999887632211 1 677888999999
Q ss_pred EEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEE
Q 001837 468 YGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAM 544 (1007)
Q Consensus 468 ~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~m 544 (1007)
.+.+++. +. |+.+++.+...... .........+.+.++++.++.++|.+.+.|++||+++++|++|+++|++++|
T Consensus 71 ~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i 148 (215)
T PF00702_consen 71 SGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAI 148 (215)
T ss_dssp EEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEE
T ss_pred ccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceee
Confidence 9998877 44 88887654433210 0001112334556677779999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCcceEEecc--CHhHH--HHHHHHHhhCC-eEEEEcCCccCHHHHhhCC
Q 001837 545 LTGDNQSAAMQAQEQLGNALNVVHSEL--LPEDK--AKIINQFKQEG-KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 545 lTGD~~~tA~~vA~~lGI~~~~V~ar~--sPeqK--~~iV~~Lq~~G-~VamVGDG~NDa~ALk~AD 606 (1007)
+|||+..+|.++++++||....||+++ +|++| .++|+.||..+ .|+|||||+||++||++||
T Consensus 149 ~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 149 LTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred eeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999866699999 99999 99999999664 9999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-15 Score=140.95 Aligned_cols=126 Identities=25% Similarity=0.366 Sum_probs=110.2
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eE
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~V 589 (1007)
-+.+.+.|+---.+=++++++|++|.++ +++++.|||...+....|+-+||+.+.+|+...|+.|..+|+.|++.+ +|
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEE
Confidence 3567788888888899999999999999 999999999999999999999999999999999999999999999987 99
Q ss_pred EEEcCCccCHHHHhhCCeeEEe-CC-CCcHHHHhhcCEEEecCCcchHHHHH
Q 001837 590 AMIGDGINDAPALATADIGISM-GI-SGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADVGIAm-g~-~gs~~A~~aADiVLl~~~l~~I~~lI 639 (1007)
+|||||.||.+||++||+||.. +. ...+-+.++||+++ .++..+.++.
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi--k~i~e~ldl~ 146 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL--KEIAEILDLL 146 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh--hhHHHHHHHh
Confidence 9999999999999999999874 32 22345678999998 5555555543
|
|
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.1e-10 Score=94.25 Aligned_cols=62 Identities=34% Similarity=0.484 Sum_probs=59.5
Q ss_pred EEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 13 YFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 13 ~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
+|+|+||+|++|+++|+++|.+++||.++.+|+.++++.|.|++..+++++|.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence 47899999999999999999999999999999999999999999888899999999999985
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=115.89 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=95.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe--------c-------cCHhHHHHHHHHHhhCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS--------E-------LLPEDKAKIINQFKQEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a--------r-------~sPeqK~~iV~~Lq~~G 587 (1007)
+++|++.+.|+.+++.| +++++||-....+..+++++|++ .+|+ + ..|+.|..+++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999998 5554 1 35789999999998888
Q ss_pred -eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHH
Q 001837 588 -KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~g 642 (1007)
.+.|+|||.||.+|++.|++||++. +.+..++.||=.-.-.+.+.+..++.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 8999999999999999999999994 5555555554433335677788777765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.6e-09 Score=92.39 Aligned_cols=69 Identities=25% Similarity=0.400 Sum_probs=64.3
Q ss_pred eeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 9 ~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+++..|.|+||+|.+|+..|+++|+.++||.++.+++..+++.|.||+...+.++|.++++++||.+..
T Consensus 1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEE 69 (71)
T ss_pred CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeee
Confidence 356789999999999999999999999999999999999999999999778999999999999997643
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.8e-09 Score=117.34 Aligned_cols=114 Identities=26% Similarity=0.350 Sum_probs=98.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|++ .+++. +..+.|.++++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 57899999999999999999999999988899999999997 44431 234689999988876
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+ | .+.++|||.||.+|++.|++||+| ++.+..++.||.++...++..+..++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 5 5 599999999999999999999999 677888999999998888888877664
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.4e-09 Score=110.43 Aligned_cols=112 Identities=22% Similarity=0.374 Sum_probs=95.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
+++|++.+.|+.|++.|+++.++|+.....+..+.+.+|+. .+|+. ..+..|..+++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 58999999999999999999999999999999999999997 55541 123347888776654
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHH
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
+ | .+.||||+.+|.+|+++|+++|+++ +.+..++.||.+|.+++|..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 4 4 4999999999999999999999994 677888999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.2e-08 Score=98.23 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=88.0
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh-CC--
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ-EG-- 587 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G-- 587 (1007)
+++.++.+.+.|.. +|++|++.|+++.|+|++....+..+.+++|+. .+|... ..|...++.+.+ .|
T Consensus 22 ~~~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~ 91 (154)
T TIGR01670 22 NGEEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALA 91 (154)
T ss_pred CCcEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCC
Confidence 34455555444432 899999999999999999999999999999998 767654 345666665543 33
Q ss_pred --eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 588 --KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 588 --~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
.++|+||+.||.+|++.|++++++. .+.+..+..+|+++.++.
T Consensus 92 ~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 92 PENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 6999999999999999999999997 667788899999997554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.6e-08 Score=102.69 Aligned_cols=104 Identities=27% Similarity=0.335 Sum_probs=84.5
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------eEEecc-CHhHHHHHHHHHhhC
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--------------VVHSEL-LPEDKAKIINQFKQE 586 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--------------~V~ar~-sPeqK~~iV~~Lq~~ 586 (1007)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++.. .+.... ..+.|...++.+.+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999843 222223 347899999777764
Q ss_pred -C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEE
Q 001837 587 -G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVIL 627 (1007)
Q Consensus 587 -G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVL 627 (1007)
| .+.++|||.||.|||+.|+.+|++. ........|+..+
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 5 3999999999999999999999995 3443444454443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-07 Score=95.99 Aligned_cols=99 Identities=18% Similarity=0.298 Sum_probs=81.3
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCH--hHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCC
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLP--EDKAKIINQFKQEG-KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sP--eqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~AD 606 (1007)
..|+.|++.|+++.++|+.+...+..+.+.+|+. .+|....| +.-..+++.++-.. .++|+||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 4799999999999999999999999999999998 77776643 33333333333222 6999999999999999999
Q ss_pred eeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 607 IGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 607 VGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
++++|+ ++.+..+..|++|+..++
T Consensus 119 ~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 119 LAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred CeEECc-CchHHHHHhCCEEcCCCC
Confidence 999998 778888999999886444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=99.84 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=102.2
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.++.-.|++++. =...+.+.+.++|++|++.|+++++.||-+...+..+++++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 345556777763 1234889999999999999999999999999999999999997632
Q ss_pred ----------------------------------------------------eE----EeccC--HhHHHHHHHHHhhC-
Q 001837 566 ----------------------------------------------------VV----HSELL--PEDKAKIINQFKQE- 586 (1007)
Q Consensus 566 ----------------------------------------------------~V----~ar~s--PeqK~~iV~~Lq~~- 586 (1007)
.+ +..+. .-.|...++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 00 11222 23688888877664
Q ss_pred C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHH
Q 001837 587 G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 587 G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||+|..+++-..+.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 4 4999999999999999999999999 8899999999999876666666544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.7e-07 Score=96.25 Aligned_cols=109 Identities=18% Similarity=0.283 Sum_probs=86.8
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh-CC----eEEEEcCCccCHHHHhh
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ-EG----KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G----~VamVGDG~NDa~ALk~ 604 (1007)
.+|+.|++.|+++.++||.....+..+++++|+. .+|... +.|...++.+.+ .| .|+||||+.||.+|++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQGQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecCC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 6899999999999999999999999999999998 777643 457666665543 34 59999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecC----CcchHHHHHHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSN----DIRKVPEAIRLAR 643 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~----~l~~I~~lI~~gR 643 (1007)
|+++++++ ++.+..+..||+++-.+ .+..+.+.+...|
T Consensus 131 aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 131 VGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred CCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 99999987 66778888899998432 2445555554333
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-07 Score=101.01 Aligned_cols=132 Identities=20% Similarity=0.231 Sum_probs=100.1
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---c----------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---N---------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~---------------- 565 (1007)
.+++-.|++++.- ...+.+.++++|++|++.|+++++.||.....+..+.+++|+.. .
T Consensus 5 li~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~ 81 (270)
T PRK10513 5 LIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGE 81 (270)
T ss_pred EEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCC
Confidence 4555667777642 34588899999999999999999999999999999999999742 0
Q ss_pred --------------------------------eEEec---------------------------------------cCHh
Q 001837 566 --------------------------------VVHSE---------------------------------------LLPE 574 (1007)
Q Consensus 566 --------------------------------~V~ar---------------------------------------~sPe 574 (1007)
.+|.. ..|+
T Consensus 82 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (270)
T PRK10513 82 TVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPE 161 (270)
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHH
Confidence 01100 0011
Q ss_pred ----------------------------------HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCC
Q 001837 575 ----------------------------------DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISG 615 (1007)
Q Consensus 575 ----------------------------------qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~g 615 (1007)
.|..-++.|.+. | .|+++|||.||.+||+.|++|+||+ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA 240 (270)
T PRK10513 162 ILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NA 240 (270)
T ss_pred HHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-Cc
Confidence 122233333332 4 4999999999999999999999999 89
Q ss_pred cHHHHhhcCEEEecCCcchHHHHHH
Q 001837 616 SALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 616 s~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.+..++.||+|..+++=..+..+|+
T Consensus 241 ~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 241 IPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred cHHHHHhcCeeccCCCcchHHHHHH
Confidence 9999999999998888888887775
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-07 Score=97.92 Aligned_cols=112 Identities=23% Similarity=0.284 Sum_probs=89.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-------------c--cCHhHHHHHHHHHhhCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-------------E--LLPEDKAKIINQFKQEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-------------r--~sPeqK~~iV~~Lq~~G 587 (1007)
++.|++.++++.|++. +++.++|+.....+..+.+++|+. .+|+ . ..|+.|..+++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3579999999999999 999999999999999999999986 3322 1 24788999999988777
Q ss_pred -eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCE-EEecCCcchHHHHHH
Q 001837 588 -KTAMIGDGINDAPALATADIGISMGISGSALATETGQV-ILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADi-VLl~~~l~~I~~lI~ 640 (1007)
.++|||||.||.+|.++|++|+.++ .........++. ++ +++..|...+.
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8999999999999999999999986 333333445555 43 56666665543
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.4e-07 Score=98.34 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=101.7
Q ss_pred EEEEEECCEEEEEEEecCc-ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------
Q 001837 505 IGYIFSGASPVGIFCLSDA-CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------ 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~-lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------ 565 (1007)
.++.-.|++++- .|. +.+.+.++|++|++.|+++++.||.....+..+++++|+...
T Consensus 5 li~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (230)
T PRK01158 5 AIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRI 80 (230)
T ss_pred EEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEE
Confidence 445556777762 333 788999999999999999999999999999999999987532
Q ss_pred -----------------------eE------------------------------------------EeccCHh--HHHH
Q 001837 566 -----------------------VV------------------------------------------HSELLPE--DKAK 578 (1007)
Q Consensus 566 -----------------------~V------------------------------------------~ar~sPe--qK~~ 578 (1007)
.. +..+.|. .|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~ 160 (230)
T PRK01158 81 FLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGT 160 (230)
T ss_pred EEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHH
Confidence 00 0011121 1555
Q ss_pred HHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 579 IINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 579 iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
-++.|.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.||+|..+++-..+.++++
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 56655543 4 4999999999999999999999999 889999999999998888888887775
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.1e-07 Score=99.86 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=99.5
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.+++-.|++++. -...+.+.++++|++|++.|+++++.||-....+..+.+++|+...
T Consensus 4 li~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~ 80 (272)
T PRK15126 4 LAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHR 80 (272)
T ss_pred EEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEe
Confidence 345556777763 1335889999999999999999999999999999999999987532
Q ss_pred ----------------------------eEE-------------------------------------------------
Q 001837 566 ----------------------------VVH------------------------------------------------- 568 (1007)
Q Consensus 566 ----------------------------~V~------------------------------------------------- 568 (1007)
.++
T Consensus 81 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~ 160 (272)
T PRK15126 81 QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQI 160 (272)
T ss_pred ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHH
Confidence 000
Q ss_pred -------------------eccCHh--HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 569 -------------------SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 569 -------------------ar~sPe--qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
..++|. .|..-|+.|.+. | .|+++|||.||.+||+.|+.||||+ ++.+.+++.
T Consensus 161 ~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~ 239 (272)
T PRK15126 161 QLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAE 239 (272)
T ss_pred HHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHh
Confidence 001111 255555555443 4 4999999999999999999999999 899999999
Q ss_pred cCE--EEecCCcchHHHHHH
Q 001837 623 GQV--ILMSNDIRKVPEAIR 640 (1007)
Q Consensus 623 ADi--VLl~~~l~~I~~lI~ 640 (1007)
||. |..+++-..+..+|+
T Consensus 240 A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 240 LPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred CCCCeecCCCcchHHHHHHH
Confidence 985 665677777777764
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.1e-07 Score=98.68 Aligned_cols=132 Identities=23% Similarity=0.318 Sum_probs=104.2
Q ss_pred EEEEEECCEEEEEEEecCc-ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------
Q 001837 505 IGYIFSGASPVGIFCLSDA-CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------ 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~-lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------ 565 (1007)
.+++..|++++ -.+. +.+.++++|+++++.|+++++.||.....+..+.+++++...
T Consensus 5 li~~DlDGTLl----~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 5 LLAFDLDGTLL----DSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred EEEEcCCCCcc----CCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 33444455543 3333 899999999999999999999999999999999999998742
Q ss_pred -----------------------eEE------------------------------------------------------
Q 001837 566 -----------------------VVH------------------------------------------------------ 568 (1007)
Q Consensus 566 -----------------------~V~------------------------------------------------------ 568 (1007)
.++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVE 160 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHH
Confidence 000
Q ss_pred --------------------eccCH--hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHh
Q 001837 569 --------------------SELLP--EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATE 621 (1007)
Q Consensus 569 --------------------ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~ 621 (1007)
-.+.| ..|...++.|.+. | .|+++||+.||.+||+.|+.||||| ++.+.+++
T Consensus 161 ~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~ 239 (264)
T COG0561 161 ALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKE 239 (264)
T ss_pred HHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHh
Confidence 00111 2477777777764 5 3999999999999999999999999 77999999
Q ss_pred hcCEEEecCCcchHHHHHHH
Q 001837 622 TGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 622 aADiVLl~~~l~~I~~lI~~ 641 (1007)
.||++..+++-..|..+++.
T Consensus 240 ~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 240 LADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred hCCcccCCccchHHHHHHHH
Confidence 99988888888888888764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.8e-07 Score=97.49 Aligned_cols=132 Identities=21% Similarity=0.219 Sum_probs=97.5
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.+++-.|++++-- ...+.+.++++|++|+++|+++++.||.....+..+.+++|+...
T Consensus 4 li~~DlDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~ 80 (266)
T PRK10976 4 VVASDLDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFS 80 (266)
T ss_pred EEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehh
Confidence 4455567777631 234888999999999999999999999999999999999987532
Q ss_pred -----------------------------eEEe-c-----------------------------------c-CHh-----
Q 001837 566 -----------------------------VVHS-E-----------------------------------L-LPE----- 574 (1007)
Q Consensus 566 -----------------------------~V~a-r-----------------------------------~-sPe----- 574 (1007)
.+|. + . .++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~ 160 (266)
T PRK10976 81 HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPL 160 (266)
T ss_pred hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHH
Confidence 0000 0 0 011
Q ss_pred -----------------------------HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 575 -----------------------------DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 575 -----------------------------qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
.|..-++.|.+. | .|+++||+.||.+||+.|+.||||+ ++.+..+
T Consensus 161 ~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK 239 (266)
T PRK10976 161 EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLK 239 (266)
T ss_pred HHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHH
Confidence 133344444333 4 4999999999999999999999999 8899999
Q ss_pred hhcC--EEEecCCcchHHHHHH
Q 001837 621 ETGQ--VILMSNDIRKVPEAIR 640 (1007)
Q Consensus 621 ~aAD--iVLl~~~l~~I~~lI~ 640 (1007)
+.|| .|..+++=..+..+|+
T Consensus 240 ~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 240 DLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HhCCCCeecccCchHHHHHHHH
Confidence 9987 6766667667777664
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.9e-07 Score=93.53 Aligned_cols=99 Identities=30% Similarity=0.420 Sum_probs=79.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
+++|++.+.|+.|++.|+++.++|+-....+..+++.+|+. .+|+. ..|..|..+++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 57999999999999999999999999999999999999987 44431 234567777777654
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQ 624 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD 624 (1007)
. | .++|+||+.+|.+|+++|+++++++ .+......++|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 3 4 4999999999999999999999997 44444444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.3e-06 Score=93.02 Aligned_cols=52 Identities=23% Similarity=0.441 Sum_probs=46.9
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|+++||+.||.+|++.|++|++|| ++.+..++.||+|+.+++=..+.++|+
T Consensus 217 e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 217 NVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 4999999999999999999999999 677777999999998888888888775
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.2e-07 Score=93.49 Aligned_cols=90 Identities=27% Similarity=0.410 Sum_probs=78.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccC-------------------HhHHHHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL-------------------PEDKAKIINQF 583 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~s-------------------PeqK~~iV~~L 583 (1007)
.+-|++++.+..|++.|.+|.++||--..-+..||.+|||+...+||+.. -..|..+|+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 35789999999999999999999999999999999999999766777642 35799999999
Q ss_pred hhC-C--eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 584 KQE-G--KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 584 q~~-G--~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
++. . .++|||||.||.+|+..||.=|+.|
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 985 2 6999999999999999988777664
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.9e-06 Score=92.23 Aligned_cols=114 Identities=22% Similarity=0.314 Sum_probs=87.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-------------------cCHhHHHHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-------------------LLPEDKAKIINQF 583 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-------------------~sPeqK~~iV~~L 583 (1007)
.++|++.++++.|++.|+++.++||.....+..+.+.+|+....+|+. ..+..|...++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 378999999999999999999999999999999999999974334431 0123588888877
Q ss_pred hhC-C--eEEEEcCCccCHHHHhh--CCeeEEeCCCC-cHHHHhhcCEEEecCCcchHHHH
Q 001837 584 KQE-G--KTAMIGDGINDAPALAT--ADIGISMGISG-SALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 584 q~~-G--~VamVGDG~NDa~ALk~--ADVGIAmg~~g-s~~A~~aADiVLl~~~l~~I~~l 638 (1007)
.+. | .++|+||+.||..|.++ ++++++.|... .+.....+|+++ +++..+..+
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 765 4 69999999999999777 57777765221 233345689988 567666554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.5e-06 Score=92.85 Aligned_cols=116 Identities=22% Similarity=0.324 Sum_probs=93.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------------------
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------- 565 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------- 565 (1007)
.+.+.+.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999985421
Q ss_pred ------------------------------------eE-------EeccCH--hHHHHHHHHHhhC-C----eEEEEcCC
Q 001837 566 ------------------------------------VV-------HSELLP--EDKAKIINQFKQE-G----KTAMIGDG 595 (1007)
Q Consensus 566 ------------------------------------~V-------~ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG 595 (1007)
.+ +..+.| -.|...|+.+.+. | .|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 011122 3577777777654 4 59999999
Q ss_pred ccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcch----HHHHH
Q 001837 596 INDAPALATADIGISMGISGSALATETGQVILMSNDIRK----VPEAI 639 (1007)
Q Consensus 596 ~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~----I~~lI 639 (1007)
.||.+|++.|++|++|+ ++.+..++.||.|..+++-.. +..++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999 788899999999987777777 55544
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.5e-06 Score=91.57 Aligned_cols=117 Identities=25% Similarity=0.300 Sum_probs=95.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------------------
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------ 565 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------ 565 (1007)
..+.+.++++|++|+++|+++++.||.....+..+.+++++...
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45778999999999999999999999999999999999997621
Q ss_pred -------------------------------------------------e-------------------------E----
Q 001837 566 -------------------------------------------------V-------------------------V---- 567 (1007)
Q Consensus 566 -------------------------------------------------~-------------------------V---- 567 (1007)
. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0 1
Q ss_pred ---EeccCH--hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 568 ---HSELLP--EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 568 ---~ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
+-.++| -.|..-|+.|.+. | .++++||+.||.+||+.|+.|++|+ ++++..+..||.++...+=..|..
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 112223 4588888888764 3 5999999999999999999999999 888999999999987766566665
Q ss_pred HH
Q 001837 638 AI 639 (1007)
Q Consensus 638 lI 639 (1007)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 43
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.9e-06 Score=83.20 Aligned_cols=114 Identities=18% Similarity=0.330 Sum_probs=94.4
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhh
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-G----KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ 604 (1007)
-.|+.|.++||++.++||.+...++.=|+++||. .+|=.. ++|....+.|.++ + .|+++||..||.|+|++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeech--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 4799999999999999999999999999999998 777654 5899988887765 4 59999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecCC----cchHHHHHHHHHHHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSND----IRKVPEAIRLARKAHWK 648 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~~----l~~I~~lI~~gR~~~~~ 648 (1007)
..+++++. .+....++.||+|+.... ++.+.++|..++..+..
T Consensus 118 vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 118 VGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred cCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 99999986 777888899999986543 55556666666555443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.2e-06 Score=91.62 Aligned_cols=127 Identities=21% Similarity=0.308 Sum_probs=95.2
Q ss_pred EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------
Q 001837 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---------------------- 565 (1007)
Q Consensus 508 v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---------------------- 565 (1007)
.-.|++++-- ...+.+++.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 4 ~DlDGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i 80 (256)
T TIGR00099 4 IDLDGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPL 80 (256)
T ss_pred EeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCC
Confidence 3456666531 234788999999999999999999999999999999999987522
Q ss_pred -------------------------eEE----------------------------------------------------
Q 001837 566 -------------------------VVH---------------------------------------------------- 568 (1007)
Q Consensus 566 -------------------------~V~---------------------------------------------------- 568 (1007)
.+|
T Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (256)
T TIGR00099 81 DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEA 160 (256)
T ss_pred CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHH
Confidence 000
Q ss_pred -------------------eccCHh--HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 569 -------------------SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 569 -------------------ar~sPe--qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
-.+.|. .|..-|+.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.
T Consensus 161 ~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~ 239 (256)
T TIGR00099 161 LNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKAL 239 (256)
T ss_pred hhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHh
Confidence 001111 255555555443 3 4999999999999999999999998 778888999
Q ss_pred cCEEEecCCcchHHHH
Q 001837 623 GQVILMSNDIRKVPEA 638 (1007)
Q Consensus 623 ADiVLl~~~l~~I~~l 638 (1007)
||+++.+++-..|..+
T Consensus 240 a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 240 ADYVTDSNNEDGVALA 255 (256)
T ss_pred CCEEecCCCCcchhhh
Confidence 9999987776666554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.5e-06 Score=99.77 Aligned_cols=52 Identities=35% Similarity=0.500 Sum_probs=47.9
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|+++|||.||.+||+.|+.||||| ++.+..++.||+|..+++=..|..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4999999999999999999999999 899999999999998888888887775
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.7e-06 Score=88.37 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=74.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-c----------CH------------hHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-L----------LP------------EDKAK 578 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-~----------sP------------eqK~~ 578 (1007)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. ..+++. + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 468999999999999999999999999999999999888543 234431 1 13 24899
Q ss_pred HHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 579 IINQFKQEG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 579 iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
+++.++... .+.|||||.||..|++.||+.++-+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 999998765 8999999999999999999988753
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.3e-06 Score=87.60 Aligned_cols=78 Identities=27% Similarity=0.406 Sum_probs=65.1
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEE-------------eccCHh-H--HHHHHHHH------
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH-------------SELLPE-D--KAKIINQF------ 583 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~-------------ar~sPe-q--K~~iV~~L------ 583 (1007)
+++.+.|+.++++|++++|+||+....+..+++.+|++...++ ++.+|. + |..+++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 6777999999999999999999999999999999999853222 333333 3 99999999
Q ss_pred hhCC-eEEEEcCCccCHHHHh
Q 001837 584 KQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 584 q~~G-~VamVGDG~NDa~ALk 603 (1007)
+... .+.++|||.||.||||
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 2233 8999999999999986
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.8e-05 Score=85.01 Aligned_cols=118 Identities=21% Similarity=0.322 Sum_probs=92.4
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc------CHhHHHHHHHHHhhCC-eEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL------LPEDKAKIINQFKQEG-KTA 590 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~------sPeqK~~iV~~Lq~~G-~Va 590 (1007)
...+-|+++++++.|+++|++..++|+++...+..+.+.+|+..- .+++ .- .|+....+++.+.... .++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 346789999999999999999999999999999999999999733 2333 22 3455555555555443 599
Q ss_pred EEcCCccCHHHHhhCC---eeEEeCCC-CcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 591 MIGDGINDAPALATAD---IGISMGIS-GSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 591 mVGDG~NDa~ALk~AD---VGIAmg~~-gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||||..+|..|-++|+ ||+..|.. ........+|+++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 77888742 4556777799998 77888776654
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.1e-06 Score=84.18 Aligned_cols=80 Identities=33% Similarity=0.428 Sum_probs=68.4
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-------------------ccCHhHHHHHHHHHh
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-------------------ELLPEDKAKIINQFK 584 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-------------------r~sPeqK~~iV~~Lq 584 (1007)
++|++.+.++.+++.|++++++||.....+..+++.+|+. .+|+ ...+..|..+++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 5899999999999999999999999999999999999987 3332 133578999999876
Q ss_pred hC-C----eEEEEcCCccCHHHHhhC
Q 001837 585 QE-G----KTAMIGDGINDAPALATA 605 (1007)
Q Consensus 585 ~~-G----~VamVGDG~NDa~ALk~A 605 (1007)
+. | .+.|+|||.||.+|++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 3 599999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.1e-05 Score=84.06 Aligned_cols=119 Identities=21% Similarity=0.256 Sum_probs=86.7
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----cCH--hHHHHHHHHHhhCC-eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----LLP--EDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----~sP--eqK~~iV~~Lq~~G-~Vam 591 (1007)
..+.|++.++++.|++.|+++.++|+........+.+.+|+... .+++. ..| +--..+++.++... .++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 45789999999999999999999999999999999999998621 23321 223 22233444444333 6999
Q ss_pred EcCCccCHHHHhhCCe-eEEeC--CC-CcHHHHhhcCEEEecCCcchHHHHHHHH
Q 001837 592 IGDGINDAPALATADI-GISMG--IS-GSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAmg--~~-gs~~A~~aADiVLl~~~l~~I~~lI~~g 642 (1007)
+||+.+|..+.++|++ +|.+. .. ..+.....+|+++ +++..+..++.++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999998 55543 11 2234455788887 7899888877643
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.2e-06 Score=84.00 Aligned_cols=89 Identities=21% Similarity=0.279 Sum_probs=73.9
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----------cCH------------hHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----------LLP------------EDK 576 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----------~sP------------eqK 576 (1007)
-+++|++.+.++.|++.|+++.++|+........+.+..|+..- .+++. ..| ..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998632 23321 111 249
Q ss_pred HHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEE
Q 001837 577 AKIINQFKQE-G-KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 577 ~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
..+++.+++. . .+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999886 5 89999999999999999988654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=86.45 Aligned_cols=88 Identities=22% Similarity=0.209 Sum_probs=73.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec---cC----------H----------hHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE---LL----------P----------EDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar---~s----------P----------eqK~~i 579 (1007)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +....+++. .+ | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 57999999999999999999999999999999999998 654345533 11 1 248899
Q ss_pred HHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 580 INQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 580 V~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
++.++... .+.|||||.||.+|.++||+.++-
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 99888765 899999999999999999997763
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00011 Score=87.68 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=85.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-----ccCHhHHHHHHHHHhhCCeEEEEcCCcc
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-----ELLPEDKAKIINQFKQEGKTAMIGDGIN 597 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-----r~sPeqK~~iV~~Lq~~G~VamVGDG~N 597 (1007)
|++|++.+.++++++.|++++++|+-....+..+++.+|+.. .+.+ +..|+.|...++.....+.+.|+||..+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~~~~yvGDS~~ 150 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGERGFDYAGNSAA 150 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCccCeeEecCCHH
Confidence 478999999999999999999999999999999999999732 4443 3467778776553332234788999999
Q ss_pred CHHHHhhCCeeEEeCCCCcH---HHHhhcCEEE-ecCCcchHHHHHHHHH
Q 001837 598 DAPALATADIGISMGISGSA---LATETGQVIL-MSNDIRKVPEAIRLAR 643 (1007)
Q Consensus 598 Da~ALk~ADVGIAmg~~gs~---~A~~aADiVL-l~~~l~~I~~lI~~gR 643 (1007)
|.|+++.|+-.++++ .+.. .|++....++ ....-..+...+++.|
T Consensus 151 Dlp~~~~A~~av~Vn-~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~l~R 199 (479)
T PRK08238 151 DLPVWAAARRAIVVG-ASPGVARAARALGPVERVFPPRPARLRTWLKALR 199 (479)
T ss_pred HHHHHHhCCCeEEEC-CCHHHHHHHHHcCCcceecCCCchHHHHHHHHhC
Confidence 999999999999997 4433 3333344333 2233334444555544
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=83.41 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=76.1
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec------------------cCHhHHHHHHHH
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE------------------LLPEDKAKIINQ 582 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar------------------~sPeqK~~iV~~ 582 (1007)
...++|++.+.|+.+++.|++++++|+.....+..+++.+|++ .+|+. ..++.|...++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 4468999999999999999999999999999999999999997 44432 224678888877
Q ss_pred Hhh-CC----eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 583 FKQ-EG----KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 583 Lq~-~G----~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
+.+ .+ .+.++||+.+|.|+++.|+.++.+.
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 654 34 5899999999999999999999885
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.1e-05 Score=79.12 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=82.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cC--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LL--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+.+|+.. +.+++. .. |+-=..+++.++-.. .++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 678999999999999999999999999999999999999862 233321 12 222233333333222 59999
Q ss_pred cCCccCHHHHhhCCee---EEeCC-CCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 593 GDGINDAPALATADIG---ISMGI-SGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG---IAmg~-~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||+.+|..+.+++++. +.-|. +..+.....+|+++ +++..|..+++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~~ 204 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALCR 204 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHhh
Confidence 9999999999999974 33331 22234566799987 66776665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.85 E-value=9.8e-05 Score=81.80 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=47.9
Q ss_pred CCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 502 GNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
....++.-.||+++.- ...+-+.++++|++|++.|+++++.||-....+..+++++|++
T Consensus 6 ~~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3456667778888631 2235577999999999999999999999999999999999874
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00021 Score=87.77 Aligned_cols=70 Identities=29% Similarity=0.474 Sum_probs=65.5
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRA 79 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~ 79 (1007)
.+.+++|.||+|.+|++.+|+.|+..+||.++.+...+....+.|||..++.+.+.+.+++.|+.+.+.+
T Consensus 69 ~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~ 138 (951)
T KOG0207|consen 69 SKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIE 138 (951)
T ss_pred ceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehh
Confidence 3678999999999999999999999999999999999999999999999999999999999999887543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=80.03 Aligned_cols=57 Identities=16% Similarity=0.111 Sum_probs=46.7
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
..++.-.|++++.- .+.+.+.++++|++|++.|++++++||.....+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 34556667777641 3456778999999999999999999999999999999999875
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0001 Score=70.78 Aligned_cols=91 Identities=23% Similarity=0.373 Sum_probs=69.8
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC--cceEEe-----------------------ccCHh
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--LNVVHS-----------------------ELLPE 574 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~--~~~V~a-----------------------r~sPe 574 (1007)
...++++++.+.+++|++.|++++++||.....+..+.++.|+. ...+++ +-.|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 44588999999999999999999999999999999999999973 223332 33444
Q ss_pred HHHHHHHHHhhCC-eEEEEcCCccCHHHHhhC-CeeEE
Q 001837 575 DKAKIINQFKQEG-KTAMIGDGINDAPALATA-DIGIS 610 (1007)
Q Consensus 575 qK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~A-DVGIA 610 (1007)
.+..+.+.+.... .++|+||+.+|..|++.+ .-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5555555554433 799999999999999984 44443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=77.46 Aligned_cols=115 Identities=19% Similarity=0.223 Sum_probs=81.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc------CHhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL------LPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~------sPeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..- .+++ .. .|+--.++++.+.... .++||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 3679999999999999999999999999999999999999731 2222 11 2333334444443222 69999
Q ss_pred cCCccCHHHHhhCCe---eEEeCCCCc-HHHHhhcCEEEecCCcchHHHHH
Q 001837 593 GDGINDAPALATADI---GISMGISGS-ALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV---GIAmg~~gs-~~A~~aADiVLl~~~l~~I~~lI 639 (1007)
||..+|..|-++|++ |+.-|.... +.....+|+++ +++..+..++
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 999999999999997 343331111 23345688887 6788777755
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00022 Score=78.22 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=41.8
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCc---HHHHhh--c-CEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGS---ALATET--G-QVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs---~~A~~a--A-DiVLl~~~l~~I~~lI~ 640 (1007)
.|+++||+.||.+||+.|++||+|+ ++. +..++. | ++|..+++-..+.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 4999999999999999999999999 554 356665 4 47776777777777765
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00047 Score=81.17 Aligned_cols=207 Identities=16% Similarity=0.182 Sum_probs=139.2
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------- 565 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------- 565 (1007)
+..|.|++.+..+.+++....|+.|-++-||.+-.|-.++...+-.|+++||..-
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 3478999999999999999999999999999999999999999999999998531
Q ss_pred ----------------------------------------------------------------------------eEEe
Q 001837 566 ----------------------------------------------------------------------------VVHS 569 (1007)
Q Consensus 566 ----------------------------------------------------------------------------~V~a 569 (1007)
-.|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 3588
Q ss_pred ccCHhHHHHHHHHHhhCC-eEEEEcCCccCHH--HHhhCCeeEEeCCC------------CcH--HHHh-----------
Q 001837 570 ELLPEDKAKIINQFKQEG-KTAMIGDGINDAP--ALATADIGISMGIS------------GSA--LATE----------- 621 (1007)
Q Consensus 570 r~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~--ALk~ADVGIAmg~~------------gs~--~A~~----------- 621 (1007)
.++|+.--++|+.+|+.| +|+.+|.-.|-.- .+-+|||+|++-.- ++. .|+.
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 899999999999999999 7888898877533 45679999987411 111 1111
Q ss_pred -----hcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHhh
Q 001837 622 -----TGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGII----ALALGGHPLVWAAVLADVGTCLIVILNS 692 (1007)
Q Consensus 622 -----aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i----~la~~g~~~~~~ail~~~~s~l~vvlNS 692 (1007)
+.|+-+-...+-++.++|.-+|..+.-+++.+.|.+...+... +-.++-.|+++...-+-.++++.+-+-+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~ 1133 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLF 1133 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHH
Confidence 1222222223445678888899999999999888766554433 2233333333322222223444444444
Q ss_pred hhhcccccCCCCcccccCCCCCccc
Q 001837 693 MLLLHETHTHRGKCIKSSSSSSHTH 717 (1007)
Q Consensus 693 lrll~~~~~~~~~~~r~~~~~~~~~ 717 (1007)
+--+-.++++.+...|++-.|.|..
T Consensus 1134 i~tL~gk~~hkSii~maagKNlqeI 1158 (1354)
T KOG4383|consen 1134 IGTLFGKFEHKSIIIMAAGKNLQEI 1158 (1354)
T ss_pred HHHHhcCCCccceEEeeccCChhhc
Confidence 4433344555555555553344433
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00027 Score=78.45 Aligned_cols=117 Identities=20% Similarity=0.367 Sum_probs=82.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-eccCHhHHH--HHHH-HHhhCC----eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SELLPEDKA--KIIN-QFKQEG----KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar~sPeqK~--~iV~-~Lq~~G----~Vam 591 (1007)
.++.|++.++|+.|++.|+++.|+|+.....+..+.+++|+.. +.++ +...+..|. .+++ .+++.| .++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4678999999999999999999999999999999999999862 1232 222232332 2332 333333 5999
Q ss_pred EcCCccCHHHHhhCCe-eEEe--CC-CCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 592 IGDGINDAPALATADI-GISM--GI-SGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAm--g~-~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
|||+.||..+.++|++ .|.+ |. ...+.....+|.++ +++..|..++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3443 31 12223445789888 67887776544
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00035 Score=75.72 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC----EEEecCCcchHHHHHH
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQ----VILMSNDIRKVPEAIR 640 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD----iVLl~~~l~~I~~lI~ 640 (1007)
.|...++.|.++ | .|+++||+.||.+||+.+++||+|+ ++.+..++.|| +|.-.++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 466677776554 4 4999999999999999999999999 77888888899 6655555566766664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00032 Score=75.12 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=78.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
-++.|++.++|+.|++.|+++.++|+........+.+++|+..- .++.. ..|... -+.+.+++.| .++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 46789999999999999999999999999999999999998621 22221 123222 3444455555 599
Q ss_pred EEcCCccCHHHHhhCCeeE-EeCCCCc---HHHHhhcCEEEecCCcchHH
Q 001837 591 MIGDGINDAPALATADIGI-SMGISGS---ALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVGI-Amg~~gs---~~A~~aADiVLl~~~l~~I~ 636 (1007)
||||..+|..|.++|++.. .+. .+. +.-...+|+++ .+|..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVP-APEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEec-CCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999753 332 221 12233577776 5566554
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0003 Score=74.45 Aligned_cols=112 Identities=20% Similarity=0.288 Sum_probs=79.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.++++.|++.|+++.++|+-+...+..+.+.+|+.. +.+++. ..|. ...+.+.+++.| .++|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~-p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPH-PDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCC-hHHHHHHHHHcCCChhHeEE
Confidence 578999999999999999999999999999999999999852 133332 1221 123334444444 5999
Q ss_pred EcCCccCHHHHhhCCee-EEe--CCCC-cHHHHhhcCEEEecCCcchHHH
Q 001837 592 IGDGINDAPALATADIG-ISM--GISG-SALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG-IAm--g~~g-s~~A~~aADiVLl~~~l~~I~~ 637 (1007)
|||..+|..|.++|++- |.+ |... .......+|+++ +++..+..
T Consensus 164 igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 99999999999999974 333 3111 123345688887 66766654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00076 Score=75.01 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=81.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEE-eccCHhHHHHHH-HHHhhCC----eEEEEcC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVH-SELLPEDKAKII-NQFKQEG----KTAMIGD 594 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~-ar~sPeqK~~iV-~~Lq~~G----~VamVGD 594 (1007)
++.|++.++++.|++.|+++.++|+.+...+..+-+.+|+... .+. +...+ .|...+ ..+++.| .++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5689999999999999999999999999999999999998632 121 22111 133333 3334333 5999999
Q ss_pred CccCHHHHhhCCee---EEeCCCCcH--HHHhhcCEEEecCCcchHHHHH
Q 001837 595 GINDAPALATADIG---ISMGISGSA--LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 595 G~NDa~ALk~ADVG---IAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI 639 (1007)
+.+|..|-++|++- +.-| .... .....+|+++ +++..|..++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999873 3233 1122 3344689988 7788887765
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00073 Score=69.94 Aligned_cols=108 Identities=16% Similarity=0.056 Sum_probs=75.1
Q ss_pred CCeEEEEEECCEEEEEEEecC----cccccHHHHHHHHHHCCCeEEEEcCCCHH--------HHHHHHHHhCCCcceEEe
Q 001837 502 GNTIGYIFSGASPVGIFCLSD----ACRTGAAEAVNQLKSLGIRTAMLTGDNQS--------AAMQAQEQLGNALNVVHS 569 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D----~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~--------tA~~vA~~lGI~~~~V~a 569 (1007)
+++.+.+.+|+++.|-..+.+ ++.|++++++++|++.|+++.++|+.... ......+..|+. .+|.
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~ 80 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYL 80 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEE
Confidence 567888899999877744443 36899999999999999999999987641 233445567876 5442
Q ss_pred c----------cCH--hHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee-EEe
Q 001837 570 E----------LLP--EDKAKIINQFKQEG-KTAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 570 r----------~sP--eqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
. ..| +-=..+++.+...- .+.||||..+|..|-++|++- |.+
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 1 122 22233444443222 699999999999999999973 444
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00097 Score=72.02 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=80.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc----C--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL----L--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~----s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.+.+++|++.|+++.++|+.+...+..+-+.+|+... .+++ .. . |+-=..+++.+.-.. .++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999988888899998631 2322 11 2 222233344443322 69999
Q ss_pred cCCccCHHHHhhCCee---EEeCCCCc--HHHHhhcCEEEecCCcchHHHHHH
Q 001837 593 GDGINDAPALATADIG---ISMGISGS--ALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG---IAmg~~gs--~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||+.+|..|-++|++- +.-|.... ......+|+++ +++..|.+.+.
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 9999999999999864 33332111 12334689988 67777765543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0024 Score=70.68 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=83.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEecc-----------C--H----hHHHHHHHH-
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSEL-----------L--P----EDKAKIINQ- 582 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar~-----------s--P----eqK~~iV~~- 582 (1007)
++|||+.+.++.|++.|+++.++||-....+..+.+++|+... .|+|+. . | ..|.+.+..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~ 200 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALR 200 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHH
Confidence 5799999999999999999999999999999999999998422 332221 1 2 335554432
Q ss_pred ----Hh---hCCeEEEEcCCccCHHHHhhC---C--eeEEeCCCCcH----HHHhhcCEEEecCCcchHHHHHH
Q 001837 583 ----FK---QEGKTAMIGDGINDAPALATA---D--IGISMGISGSA----LATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 583 ----Lq---~~G~VamVGDG~NDa~ALk~A---D--VGIAmg~~gs~----~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
++ ....|.|+|||.||+.|..-. . +-|++-....+ .-+++=||||.+|.-..++..|.
T Consensus 201 ~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~il 274 (277)
T TIGR01544 201 NTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSIL 274 (277)
T ss_pred HHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHHH
Confidence 22 112699999999999996544 1 23333222222 34568899999998777777653
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0018 Score=69.06 Aligned_cols=115 Identities=26% Similarity=0.336 Sum_probs=80.9
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC----cceEEec-----cCH--hHHHHHHHHHhhC-C-e
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA----LNVVHSE-----LLP--EDKAKIINQFKQE-G-K 588 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~----~~~V~ar-----~sP--eqK~~iV~~Lq~~-G-~ 588 (1007)
.++.||+.+.+++|++.|+++.++|+-....+..+.+.+|+. .+.+++. -.| +-=...++.+.-. . .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 378999999999999999999999999999999999999986 2334332 123 2222233333322 2 5
Q ss_pred EEEEcCCccCHHHHhhCCeeE--EeCCCCc--H--HHHhhcCEEEecCCcchHHHHH
Q 001837 589 TAMIGDGINDAPALATADIGI--SMGISGS--A--LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVGI--Amg~~gs--~--~A~~aADiVLl~~~l~~I~~lI 639 (1007)
++||||+.+|..|-++|++.. ++. .+. . .....+|.++ +++..+..++
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i--~~~~~l~~~~ 219 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVL--DSVADLPALL 219 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceee--cCHHHHHHhh
Confidence 999999999999999999975 332 222 1 2234577777 6676665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=71.29 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=82.0
Q ss_pred ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------
Q 001837 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------ 565 (1007)
Q Consensus 510 ~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------ 565 (1007)
-|++++.--.=..+..|.+.++|+++++.|+.+++.||-....+..+.+++++..+
T Consensus 8 lDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~ 87 (249)
T TIGR01485 8 LDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWA 87 (249)
T ss_pred CCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHH
Confidence 45666521001456789999999999999999999999999999999988886432
Q ss_pred -----------------------------------e----------------------------EEe-----ccCH--hH
Q 001837 566 -----------------------------------V----------------------------VHS-----ELLP--ED 575 (1007)
Q Consensus 566 -----------------------------------~----------------------------V~a-----r~sP--eq 575 (1007)
. +++ .+.| -.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~ 167 (249)
T TIGR01485 88 EYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSG 167 (249)
T ss_pred HHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCC
Confidence 0 010 1122 25
Q ss_pred HHHHHHHHhhC-C----eEEEEcCCccCHHHHhh-CCeeEEeCCCCcHHHHhh
Q 001837 576 KAKIINQFKQE-G----KTAMIGDGINDAPALAT-ADIGISMGISGSALATET 622 (1007)
Q Consensus 576 K~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~-ADVGIAmg~~gs~~A~~a 622 (1007)
|...|+.|.+. | .|+++||+.||.+|++. ++.||+|+ ++.+..++.
T Consensus 168 K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~ 219 (249)
T TIGR01485 168 KGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQW 219 (249)
T ss_pred hHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHH
Confidence 77777777654 4 59999999999999998 67999998 666655543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00003 copper ion binding protein | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0018 Score=52.58 Aligned_cols=65 Identities=32% Similarity=0.399 Sum_probs=55.3
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
++..+.|.|+.|..|++.++..+...+++..+.+++..+++.+.|++.......+...+...||.
T Consensus 2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 66 (68)
T TIGR00003 2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE 66 (68)
T ss_pred cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45679999999999999999999999999999999999999999987655666676666666653
|
This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=72.86 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=91.1
Q ss_pred CeEEEEEECCEEEEEEEe--cCcccccHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------
Q 001837 503 NTIGYIFSGASPVGIFCL--SDACRTGAAEAVNQLKS-LGIRTAMLTGDNQSAAMQAQEQLGNALN-------------- 565 (1007)
Q Consensus 503 ~~~i~v~~d~~~lGli~l--~D~lR~~a~eaI~~Lr~-aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------- 565 (1007)
...+++..|++++-...= .-.+-++++++|++|++ .|+.++++||.....+..+.+.+++..-
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 456777788888742110 11455789999999998 7999999999999998887776653200
Q ss_pred ---------------------------------------------------------------------eEEeccCH--h
Q 001837 566 ---------------------------------------------------------------------VVHSELLP--E 574 (1007)
Q Consensus 566 ---------------------------------------------------------------------~V~ar~sP--e 574 (1007)
..+.++.| .
T Consensus 94 ~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~ 173 (266)
T PRK10187 94 HIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGT 173 (266)
T ss_pred eeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCC
Confidence 01112223 2
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhC----CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATA----DIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~A----DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|...|+.+.+. | .|+++||+.||.+|++.+ +.||+|| ++. ..|++.| ++...+..++.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeC--CCHHHHHHHHH
Confidence 566666665543 3 589999999999999999 9999998 332 4477777 56776666554
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0016 Score=71.17 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=64.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-----cCHhHHHHHHHHHhhCC-----eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-----LLPEDKAKIINQFKQEG-----KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-----~sPeqK~~iV~~Lq~~G-----~V 589 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+++|+.. +.|++. -.|. ...+.+.+++.| .+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIELGVYDVAAC 177 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHcCCCCchhe
Confidence 467999999999999999999999999999999999888762 223321 1232 223344444443 48
Q ss_pred EEEcCCccCHHHHhhCCe
Q 001837 590 AMIGDGINDAPALATADI 607 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADV 607 (1007)
+||||..+|..|-++|++
T Consensus 178 l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred EEECCcHHHHHHHHHCCC
Confidence 999999999999999996
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0024 Score=69.83 Aligned_cols=110 Identities=16% Similarity=0.166 Sum_probs=76.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEecc----C--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHSEL----L--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~ar~----s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..- .+.+.- . |+-=..+.+.+.-.. .++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 4688999999999999999999999999999999999998721 222222 2 223233334333332 59999
Q ss_pred cCCccCHHHHhhCCee-EEe--CCCCcHHHHhhcCEEEecCCcch
Q 001837 593 GDGINDAPALATADIG-ISM--GISGSALATETGQVILMSNDIRK 634 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAm--g~~gs~~A~~aADiVLl~~~l~~ 634 (1007)
||..+|..|-++|++- |.+ |..........+|+++ +++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 9999999999999963 333 3111122234688887 56665
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0043 Score=64.43 Aligned_cols=115 Identities=22% Similarity=0.322 Sum_probs=71.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCcceEEec----------cC--HhH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNALNVVHSE----------LL--PED 575 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~~~V~ar----------~s--Peq 575 (1007)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+..+.++.. .. |+-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 3679999999999999999999998763 11223344567643344421 12 232
Q ss_pred HHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee-EEeCCCCcH---HHHhhc--CEEEecCCcchHHHHHH
Q 001837 576 KAKIINQFKQEG-KTAMIGDGINDAPALATADIG-ISMGISGSA---LATETG--QVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 576 K~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG-IAmg~~gs~---~A~~aA--DiVLl~~~l~~I~~lI~ 640 (1007)
-..+++.+.-.. .++||||..+|..+-++|++- |.+. .|.. .....+ |+++ +++..+..++.
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 233344343322 699999999999999999973 3332 2221 112235 7776 66777766553
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0013 Score=71.55 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=66.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHHHHhCCC--c--ceEEeccCH--hHHHHHHHHHhhCCeEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD----NQSAAMQAQEQLGNA--L--NVVHSELLP--EDKAKIINQFKQEGKTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD----~~~tA~~vA~~lGI~--~--~~V~ar~sP--eqK~~iV~~Lq~~G~VamV 592 (1007)
.+.+++++.++.|++.|+++.++|+- ...++..+.+.+|+. . ..++..-++ .+|.. .+++.|.++|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~i~I~I 190 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKNIRIFY 190 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcCCeEEE
Confidence 36788999999999999999999994 577999999999993 2 244544332 34544 45566789999
Q ss_pred cCCccCHHHHhhCCe-eEEe
Q 001837 593 GDGINDAPALATADI-GISM 611 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV-GIAm 611 (1007)
||..+|..|-++|++ +|.+
T Consensus 191 GDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 191 GDSDNDITAAREAGARGIRI 210 (237)
T ss_pred cCCHHHHHHHHHcCCcEEEE
Confidence 999999999999987 4443
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0014 Score=71.37 Aligned_cols=84 Identities=13% Similarity=0.087 Sum_probs=63.4
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHHHHhCCCc--ceEEeccC-HhHHHHHHHHHhhCCeEEEEcCCc
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGD----NQSAAMQAQEQLGNAL--NVVHSELL-PEDKAKIINQFKQEGKTAMIGDGI 596 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD----~~~tA~~vA~~lGI~~--~~V~ar~s-PeqK~~iV~~Lq~~G~VamVGDG~ 596 (1007)
+.+++++.++++++.|+++.++|+- ...++..+.+.+|+.. ..++..-. +.-|......+++.|.++|+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~i~i~vGDs~ 194 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCCCeEEEeCCH
Confidence 3445999999999999999999997 7789999999999974 23444222 111111224556677889999999
Q ss_pred cCHHHHhhCCe
Q 001837 597 NDAPALATADI 607 (1007)
Q Consensus 597 NDa~ALk~ADV 607 (1007)
||..|-++|++
T Consensus 195 ~DI~aAk~AGi 205 (237)
T TIGR01672 195 NDITAAKEAGA 205 (237)
T ss_pred HHHHHHHHCCC
Confidence 99999999986
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.004 Score=68.79 Aligned_cols=112 Identities=16% Similarity=0.212 Sum_probs=78.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+.+|+.. +.+++. -.|. -.-+...+++.| .++|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~-Pe~~~~a~~~l~~~p~~~l~ 187 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPD-PEMFMYAAERLGFIPERCIV 187 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCC-HHHHHHHHHHhCCChHHeEE
Confidence 468999999999999999999999999999999999999863 223221 1232 112233344444 5999
Q ss_pred EcCCccCHHHHhhCCee-EEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 592 IGDGINDAPALATADIG-ISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG-IAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
|||..+|..|-++|++- |++...........+|+++ +++..+..
T Consensus 188 IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 188 FGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred EcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 99999999999999973 3442122233334578876 56665543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0035 Score=69.33 Aligned_cols=115 Identities=15% Similarity=0.171 Sum_probs=79.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-c----CHhHHHHHHHHHhhCC-----eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-L----LPEDKAKIINQFKQEG-----KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-~----sPeqK~~iV~~Lq~~G-----~V 589 (1007)
.+.|++.++|+.|++.|+++.++|+.....+..+-+.+|+.. +.+++. - .|. ..-+.+.+++.| .+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~-p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY-PWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC-hHHHHHHHHHcCCCCCcce
Confidence 467999999999999999999999999998888877766531 233322 1 231 122344444443 48
Q ss_pred EEEcCCccCHHHHhhCCe---eEEeCCCC------------------------cHHHHhhcCEEEecCCcchHHHHHH
Q 001837 590 AMIGDGINDAPALATADI---GISMGISG------------------------SALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADV---GIAmg~~g------------------------s~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+||||..+|..|-++|++ |+.-|... .......+|+++ +++..+..++.
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 999999999999999996 44444210 122334578888 77888877663
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0065 Score=71.55 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=45.7
Q ss_pred HHHHHHHHhhC----C----eEEEEcCCccCHHHHhhCC-eeEEeCCCCcHHHHhh--------cCEEEe-cCCcchHHH
Q 001837 576 KAKIINQFKQE----G----KTAMIGDGINDAPALATAD-IGISMGISGSALATET--------GQVILM-SNDIRKVPE 637 (1007)
Q Consensus 576 K~~iV~~Lq~~----G----~VamVGDG~NDa~ALk~AD-VGIAmg~~gs~~A~~a--------ADiVLl-~~~l~~I~~ 637 (1007)
|...|+.|.+. | .|+++||+.||.+||+.++ .||+|+ ++.+..++. ++++.. +.+-..|.+
T Consensus 176 Kg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred HHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 77777777554 4 5899999999999999999 699999 677666653 255544 234455655
Q ss_pred HHH
Q 001837 638 AIR 640 (1007)
Q Consensus 638 lI~ 640 (1007)
+|.
T Consensus 255 al~ 257 (413)
T PLN02382 255 AIG 257 (413)
T ss_pred HHH
Confidence 553
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.004 Score=74.42 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=82.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-c-cCHhHHHHH-HHHHhhCC--eEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-E-LLPEDKAKI-INQFKQEG--KTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-r-~sPeqK~~i-V~~Lq~~G--~VamVGDG 595 (1007)
++.||+.+.+++|++.|+++.++|+-....+..+.+.+|+.. +.+++ . ..+..|..+ ...+++.+ .++||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 578999999999999999999999999999999999999862 12222 1 111112223 33344444 69999999
Q ss_pred ccCHHHHhhCCe-eEEeCC-CCcHHHHhhcCEEEecCCcchHHHHHHH
Q 001837 596 INDAPALATADI-GISMGI-SGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 596 ~NDa~ALk~ADV-GIAmg~-~gs~~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
.+|..|-+.|++ .|.+.. .........+|+++ +++..+..++..
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 999999999997 344431 12222234588887 678877776643
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0054 Score=65.60 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=74.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-eEEec-----cCHhHHHHHHHHHhhCC----eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-VVHSE-----LLPEDKAKIINQFKQEG----KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-~V~ar-----~sPeqK~~iV~~Lq~~G----~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+.....+...-+..|+... .+.+. ..|. -.-+...+++.| .++||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~-p~~~~~~~~~~g~~p~~~l~i 161 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPE-PDAYLLGAQLLGLAPQECVVV 161 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCC-cHHHHHHHHHcCCCcccEEEE
Confidence 4789999999999999999999999887777777777887422 22221 1232 122333444444 59999
Q ss_pred cCCccCHHHHhhCCee-EEeCCCCcHHHHhhcCEEEecCCcchH
Q 001837 593 GDGINDAPALATADIG-ISMGISGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAmg~~gs~~A~~aADiVLl~~~l~~I 635 (1007)
||..+|..|-++|++- |++...........+|+++ +++..+
T Consensus 162 gDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 162 EDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred ecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe--cchhhe
Confidence 9999999999999983 5554222223344678776 455544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0091 Score=58.49 Aligned_cols=102 Identities=16% Similarity=0.226 Sum_probs=70.7
Q ss_pred EEEEECCEEEEEEEe-----cCcccccHHHHHHHHHHCCCeEEEEcCCC--------HHHHHHHHHHhCCCcceEEec--
Q 001837 506 GYIFSGASPVGIFCL-----SDACRTGAAEAVNQLKSLGIRTAMLTGDN--------QSAAMQAQEQLGNALNVVHSE-- 570 (1007)
Q Consensus 506 i~v~~d~~~lGli~l-----~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~--------~~tA~~vA~~lGI~~~~V~ar-- 570 (1007)
+.+..|+++..-... +-.+.|++.+++++|++.|+++.++|+.. ......+.+.+|+....++..
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 82 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPH 82 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 345566666632111 23678999999999999999999999988 777888999999863333221
Q ss_pred -cCH--hHHHHHHHHHh-hCC-eEEEEcC-CccCHHHHhhCCe
Q 001837 571 -LLP--EDKAKIINQFK-QEG-KTAMIGD-GINDAPALATADI 607 (1007)
Q Consensus 571 -~sP--eqK~~iV~~Lq-~~G-~VamVGD-G~NDa~ALk~ADV 607 (1007)
..| +-=..+++.++ -.. .++|||| -.+|..+.+++++
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 233 22223444442 222 6999999 5999999999886
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0098 Score=62.62 Aligned_cols=116 Identities=21% Similarity=0.351 Sum_probs=91.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------------------
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------- 565 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------- 565 (1007)
.+-|++.++++.|++. ...+++|--...-++++|..+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999876 55666777778889999999998532
Q ss_pred -----eEEeccCHhHHHHHHHHHh---------------hC-C---eEEEEcCCccCHHHHhhCC----eeEEeCCCCcH
Q 001837 566 -----VVHSELLPEDKAKIINQFK---------------QE-G---KTAMIGDGINDAPALATAD----IGISMGISGSA 617 (1007)
Q Consensus 566 -----~V~ar~sPeqK~~iV~~Lq---------------~~-G---~VamVGDG~NDa~ALk~AD----VGIAmg~~gs~ 617 (1007)
.+|+|+.|.+-.+|+...| +. + ..+.|||.+.|..||+.+. +.||+ +|.+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF--NGNe 239 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF--NGNE 239 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--cCCc
Confidence 5788988876555544444 33 2 3689999999999999984 55666 8899
Q ss_pred HHHhhcCEEEecCCcchHHHHHHH
Q 001837 618 LATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 618 ~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
-|..-||+.+.+++...+..+|.+
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999999999988888765
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.009 Score=66.41 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=45.2
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.++...|++++- -.+..-+.++++|++|++.||.+++.||-.......+.+++|+.
T Consensus 3 LIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 3 LVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 445556666653 23446677999999999999999999999999999999999864
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0042 Score=65.32 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=63.5
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEE------eccCHhHHHHHHHHHhhCC-eEEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVH------SELLPEDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~------ar~sPeqK~~iV~~Lq~~G-~Vam 591 (1007)
.+++.+++.++++.|++.|+++.++||-....+..+.+.+|+..- .++ ..-.|+--..+++.+.-.. .++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 345677789999999999999999999999999999999998621 111 1223444344555544333 6999
Q ss_pred EcCCccCHHHHhhC
Q 001837 592 IGDGINDAPALATA 605 (1007)
Q Consensus 592 VGDG~NDa~ALk~A 605 (1007)
|||+.+|+.|-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999987765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=68.64 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=78.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCH--hHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sP--eqK~~iV~~Lq~~G-~VamV 592 (1007)
.+.||+.++++.|++.|+++.++|+-....+..+-+.+||.. +.+++. -.| +-=...++.+.-.. .++||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999863 123221 123 22233344443333 69999
Q ss_pred cCCccCHHHHhhCCee-EEeCCCCcH-HHHhhcCEEEecCCcchHH
Q 001837 593 GDGINDAPALATADIG-ISMGISGSA-LATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAmg~~gs~-~A~~aADiVLl~~~l~~I~ 636 (1007)
||..+|+.|-++|++- |++. .+.. .....+|+++ +++..|.
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 9999999999999973 4443 2222 2223588877 6666653
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0072 Score=64.35 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=66.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|++++++|+-+...+....+.+|+.. +.++. +..|... .+...+++.| .++|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~~ 172 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPK-IFYAALKRLGVKPEEAVM 172 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHH-HHHHHHHHcCCChhhEEE
Confidence 578999999999999999999999998888888889999862 12222 2234222 2334444444 5999
Q ss_pred EcCCc-cCHHHHhhCCe-eEEeC
Q 001837 592 IGDGI-NDAPALATADI-GISMG 612 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADV-GIAmg 612 (1007)
|||.. +|..+-++|++ .|.+.
T Consensus 173 igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 173 VGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred ECCChHHHHHHHHHCCCEEEEEC
Confidence 99998 99999999987 45444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.009 Score=64.55 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=42.5
Q ss_pred EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 508 v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
+-.|++++- .+..-++++++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 4 ~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 4 TDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 334555543 3556668999999999999999999999999999999999963
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.012 Score=62.81 Aligned_cols=90 Identities=19% Similarity=0.110 Sum_probs=70.6
Q ss_pred cccccHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-------------cCHhHHHHHHHHHhhC
Q 001837 523 ACRTGAAEAVN-QLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-------------LLPEDKAKIINQFKQE 586 (1007)
Q Consensus 523 ~lR~~a~eaI~-~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-------------~sPeqK~~iV~~Lq~~ 586 (1007)
.++|++.++|+ .+++.|++++++|+-....+..+|+..++.. ..+..+ +.-++|+.-++..-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCC
Confidence 46899999996 7899999999999999999999999865421 112111 3457899877755322
Q ss_pred C--eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 587 G--KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 587 G--~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
. ..-+=||..||.|+|+.||-.+++.
T Consensus 174 ~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 2 4568899999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.015 Score=62.08 Aligned_cols=90 Identities=17% Similarity=0.067 Sum_probs=71.2
Q ss_pred cccccHHHHH-HHHHHCCCeEEEEcCCCHHHHHHHHHHhCC--CcceEEec-------------cCHhHHHHHHHHHhh-
Q 001837 523 ACRTGAAEAV-NQLKSLGIRTAMLTGDNQSAAMQAQEQLGN--ALNVVHSE-------------LLPEDKAKIINQFKQ- 585 (1007)
Q Consensus 523 ~lR~~a~eaI-~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI--~~~~V~ar-------------~sPeqK~~iV~~Lq~- 585 (1007)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+ ....+..+ +.-++|+.-++..-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence 4589999999 578899999999999999999999999995 11222111 345889988775532
Q ss_pred CC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 586 EG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
.. ..-+=||..||.|+|+.|+-.++++
T Consensus 175 ~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 175 PLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 22 4568899999999999999999985
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.014 Score=60.40 Aligned_cols=128 Identities=16% Similarity=0.186 Sum_probs=76.9
Q ss_pred EEEEEECCEEEE---EEEe--cCcccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCc
Q 001837 505 IGYIFSGASPVG---IFCL--SDACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNAL 564 (1007)
Q Consensus 505 ~i~v~~d~~~lG---li~l--~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~ 564 (1007)
.+++-+|++++. ++.= .-.+.|++.++|++|+++|+++.++|.-+. .....+..+.|+..
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 455666776651 1000 113578999999999999999999997663 11223444555543
Q ss_pred ceEEe----------------ccCHhHHHHHHHHHhhCC----eEEEEcCCccCHHHHhhCCee--EEeCCCCcH---HH
Q 001837 565 NVVHS----------------ELLPEDKAKIINQFKQEG----KTAMIGDGINDAPALATADIG--ISMGISGSA---LA 619 (1007)
Q Consensus 565 ~~V~a----------------r~sPeqK~~iV~~Lq~~G----~VamVGDG~NDa~ALk~ADVG--IAmg~~gs~---~A 619 (1007)
+.++. ...|. -..+...+++.| .++||||...|..|-++|++. |.+. .|.. ..
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~-p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~ 160 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPK-PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEA 160 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCC-HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccc
Confidence 34432 11232 122333444444 599999999999999999984 3433 3322 11
Q ss_pred HhhcCEEEecCCcchHH
Q 001837 620 TETGQVILMSNDIRKVP 636 (1007)
Q Consensus 620 ~~aADiVLl~~~l~~I~ 636 (1007)
...+|+++ +++..|+
T Consensus 161 ~~~ad~~i--~~~~el~ 175 (176)
T TIGR00213 161 ENIADWVL--NSLADLP 175 (176)
T ss_pred cccCCEEe--ccHHHhh
Confidence 23488888 5666553
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02957 copper, zinc superoxide dismutase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0096 Score=64.92 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=58.9
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYG 81 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g 81 (1007)
.++.|.+ +|+|++|+..|++.|.+++||..+.+++..+++.|.|+ ....++.+.+++.||.+.+...+
T Consensus 6 ~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~~ 73 (238)
T PLN02957 6 LLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS---SPVKAMTAALEQTGRKARLIGQG 73 (238)
T ss_pred EEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCcEEEecCC
Confidence 3467888 79999999999999999999999999999999999984 35788999999999987665543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.014 Score=60.24 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=73.2
Q ss_pred CCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHhCCCcceEEeccCHhHHHHH
Q 001837 501 KGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDN-QSAAMQAQEQLGNALNVVHSELLPEDKAKI 579 (1007)
Q Consensus 501 ~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~-~~tA~~vA~~lGI~~~~V~ar~sPeqK~~i 579 (1007)
.+...+.+..|+++.-. =...+.|++.+++++|++.|++++++|+.+ ...+..+.+.+|+. .++....|... .+
T Consensus 23 ~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~-~~ 97 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGC-AF 97 (170)
T ss_pred CCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChH-HH
Confidence 34455556666554311 123578999999999999999999999988 67788888899986 44433455322 33
Q ss_pred HHHHhhCC----eEEEEcCCc-cCHHHHhhCCe
Q 001837 580 INQFKQEG----KTAMIGDGI-NDAPALATADI 607 (1007)
Q Consensus 580 V~~Lq~~G----~VamVGDG~-NDa~ALk~ADV 607 (1007)
...+++.| .++||||.. .|..+-++|++
T Consensus 98 ~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 98 RRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred HHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 34445444 599999998 79999999997
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.012 Score=65.98 Aligned_cols=89 Identities=12% Similarity=-0.000 Sum_probs=72.3
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-c--eEEe--------------ccCHhHHHHHHHH
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL-N--VVHS--------------ELLPEDKAKIINQ 582 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~-~--~V~a--------------r~sPeqK~~iV~~ 582 (1007)
..+++.+++.++|++|++.|++++++||.....+..+.+.+|+.. . .+.+ +-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 567899999999999999999999999999999999999988873 1 1111 3346677777776
Q ss_pred HhhC--CeEEEEcCCccCHHHHhhCCee
Q 001837 583 FKQE--GKTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 583 Lq~~--G~VamVGDG~NDa~ALk~ADVG 608 (1007)
+-.. ..++||||..+|+.+-++|+|-
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 5442 3799999999999999999985
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0055 Score=78.55 Aligned_cols=63 Identities=21% Similarity=0.343 Sum_probs=54.5
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+++++.|+||+|++|+..|+++|++++||.++.+++. +..+..+ .+.+++.+.+++.||++..
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~~~i~~~i~~~Gy~~~~ 65 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASAEALIETIKQAGYDASV 65 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCHHHHHHHHHhcCCcccc
Confidence 4579999999999999999999999999999999995 4455543 3678999999999998765
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0092 Score=62.62 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=64.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|+++.++|+-+......+.+.+|+.. +.+++ ...|.. .-+...+++.| .++|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~-~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAP-QVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCH-HHHHHHHHHhCCChhhEEE
Confidence 578999999999999999999999999998999999999852 23332 123332 22233333333 5999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||+.+|..+-++|++-
T Consensus 171 vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFK 187 (198)
T ss_pred EeCCHHHHHHHHHCCCc
Confidence 99999999999998874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.015 Score=60.39 Aligned_cols=93 Identities=9% Similarity=0.005 Sum_probs=68.1
Q ss_pred EEecCcccccHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhCCC---------c--c-eEEeccCHhHH--HHHHHH
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTGD-NQSAAMQAQEQLGNA---------L--N-VVHSELLPEDK--AKIINQ 582 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD-~~~tA~~vA~~lGI~---------~--~-~V~ar~sPeqK--~~iV~~ 582 (1007)
..-.-+++|++.++++.|+++|+++.++|+- ....+..+-+.+|+. . + .+.+.-.+..| ..+.+.
T Consensus 40 ~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 40 SGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred CCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 3334467899999999999999999999975 889999999999976 2 1 33333322223 334555
Q ss_pred HhhC---C----eEEEEcCCccCHHHHhhCCeeEE
Q 001837 583 FKQE---G----KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 583 Lq~~---G----~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
+.+. | .++||||...|+.|-++|.+-..
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 5432 2 69999999999999999987543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.012 Score=62.72 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=75.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-c----CHhHHHHHHHHHhhC-C----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-L----LPEDKAKIINQFKQE-G----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-~----sPeqK~~iV~~Lq~~-G----~Va 590 (1007)
++.|++.+++++|++. ++++++|+-....+..+.+.+|+.. +.+++. . .|+.. .+-..+++. | .++
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE-IFNYALERMPKFSKEEVL 174 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH-HHHHHHHHhcCCCchheE
Confidence 5789999999999999 9999999999999999999999852 234332 1 24322 122333333 3 599
Q ss_pred EEcCCc-cCHHHHhhCCe-eEEeCC-CCcHHHHhhcCEEEecCCcchHHHH
Q 001837 591 MIGDGI-NDAPALATADI-GISMGI-SGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 591 mVGDG~-NDa~ALk~ADV-GIAmg~-~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
||||.. +|..+-+.+++ +|.+.. ..+......+|.++ +++..|..+
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 999998 89999999996 344321 11212223466666 666666554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.015 Score=61.41 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=40.4
Q ss_pred EEECCEEEEEEEecC--cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Q 001837 508 IFSGASPVGIFCLSD--ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG 561 (1007)
Q Consensus 508 v~~d~~~lGli~l~D--~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG 561 (1007)
+..|++++. .+ ++.+.+.++|++|++.|++++++||-....+..+.+.++
T Consensus 4 ~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 4 FDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 345666653 22 477899999999999999999999999999998887754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.015 Score=58.42 Aligned_cols=87 Identities=20% Similarity=0.276 Sum_probs=66.6
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC--cceEEecc-----CH--hHHHHHHHHHhhCC-eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--LNVVHSEL-----LP--EDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~--~~~V~ar~-----sP--eqK~~iV~~Lq~~G-~Vam 591 (1007)
.++.|++.+.+++|++.|++++++|+-+......+.+++|+. .+.++..- .| +-=..+++.+.-.. .++|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 357899999999999999999999999999999999999987 33444321 22 22233344443333 7999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||...|..+-++|++-
T Consensus 156 vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EESSHHHHHHHHHTTSE
T ss_pred EeCCHHHHHHHHHcCCe
Confidence 99999999999999873
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=60.42 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=58.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.++|+.|++.|+++.++|+... +..+.+.+|+... .++. +-.|. ...+-..+++.| .++|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~-p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPD-PEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCC-hHHHHHHHHHcCCCHHHeEE
Confidence 5789999999999999999999997432 4567788887621 2221 12232 222233444444 5999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||..+|..+-++|++-
T Consensus 164 vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMF 180 (185)
T ss_pred EecCHHHHHHHHHcCCE
Confidence 99999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.024 Score=69.53 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=43.9
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI 562 (1007)
..++...|++++.- .+..-+.++++|++|+++|+.+++.||.....+..+++++|+
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 45556667777532 112335689999999999999999999999999999999886
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.022 Score=60.88 Aligned_cols=114 Identities=17% Similarity=0.198 Sum_probs=75.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceE-Eecc----CHh--HHHHHHHHHhhC-C-eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVV-HSEL----LPE--DKAKIINQFKQE-G-KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V-~ar~----sPe--qK~~iV~~Lq~~-G-~Vam 591 (1007)
++.|++.+++++|+ .|+++.++|......+...-+.+|+.. +.+ .+.- .|. -=..+++.+.-. . .++|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 46899999999999 689999999998888888888888752 233 3322 232 222233333321 2 5999
Q ss_pred EcCCc-cCHHHHhhCCee-EEeCCCCcH-HHHhhcCEEEecCCcchHHHHH
Q 001837 592 IGDGI-NDAPALATADIG-ISMGISGSA-LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADVG-IAmg~~gs~-~A~~aADiVLl~~~l~~I~~lI 639 (1007)
|||.. +|..+-++|++- |.+...+.. .....+|+++ +++..|..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999984 444311211 1112467777 6677776654
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.014 Score=62.84 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=64.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-eccCHhHH--HHHHH-HHhhCC----eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SELLPEDK--AKIIN-QFKQEG----KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar~sPeqK--~~iV~-~Lq~~G----~VamV 592 (1007)
.+.|++.++++.|++.|+++.++|+-....+...-+.+|+.. +.++ +.-....| ..+.+ .+++.| .++||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 578999999999999999999999998888888888888752 1232 22111112 23333 344444 59999
Q ss_pred cCCccCHHHHhhCCee
Q 001837 593 GDGINDAPALATADIG 608 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG 608 (1007)
||..+|..|-++|++.
T Consensus 173 gDs~~di~aA~~aG~~ 188 (224)
T PRK14988 173 DDSEPILDAAAQFGIR 188 (224)
T ss_pred cCCHHHHHHHHHcCCe
Confidence 9999999999999985
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.025 Score=63.43 Aligned_cols=112 Identities=17% Similarity=0.205 Sum_probs=71.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCC---Ccc-eEEe-ccCHhHH--H-HHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGN---ALN-VVHS-ELLPEDK--A-KIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI---~~~-~V~a-r~sPeqK--~-~iV~~Lq~~G----~Va 590 (1007)
++.|++.+.++.|++.|+++.++|+-+......+-+..++ ... .++. ...+..| . -+...+++.| .++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999988888777665532 110 2221 1111112 1 2223333333 599
Q ss_pred EEcCCccCHHHHhhCCeeEEeCCCCc--HHHHhhcCEEEecCCcchHH
Q 001837 591 MIGDGINDAPALATADIGISMGISGS--ALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVGIAmg~~gs--~~A~~aADiVLl~~~l~~I~ 636 (1007)
||||+.+|..|-++|++.......|. ......+|+++ +++..+.
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 99999999999999997533221222 11224588887 5565543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.028 Score=57.59 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=59.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceE-Eecc----CH--hHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVV-HSEL----LP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V-~ar~----sP--eqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+.. +.+ ++.- .| +-=..+.+.+.... .++||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 578999999999999999999999988777 66666688852 233 3222 22 22223333332222 69999
Q ss_pred cCCccCHHHHhhCCe
Q 001837 593 GDGINDAPALATADI 607 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV 607 (1007)
||...|..|-+++++
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998887
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.023 Score=66.33 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=69.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH-HhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE-QLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~-~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
.+.|++.+++++|++.|+++.|+|+-....+....+ ..|+.. +.+++. ..|. ...+.+.+++.| .++
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~-p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPS-PDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCC-HHHHHHHHHHcCCChhHEE
Confidence 467999999999999999999999998888877665 677742 123221 1231 123344444443 699
Q ss_pred EEcCCccCHHHHhhCCee-EEeCCCCc--HHHHhhcCEEE
Q 001837 591 MIGDGINDAPALATADIG-ISMGISGS--ALATETGQVIL 627 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG-IAmg~~gs--~~A~~aADiVL 627 (1007)
||||..+|..|-++|++- |.+. .+. ......+|.++
T Consensus 172 ~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 172 VIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVI 210 (382)
T ss_pred EEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEe
Confidence 999999999999999975 4443 222 22234466665
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.027 Score=57.87 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=68.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC----CCcceE----------------EeccC--HhHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG----NALNVV----------------HSELL--PEDKAKII 580 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG----I~~~~V----------------~ar~s--PeqK~~iV 580 (1007)
.++|+.++.++.+++.+++++++|+--..-...+-++++ |....+ +-.-+ --+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 478999999999999999999998877666666666665 321111 11111 24799999
Q ss_pred HHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 581 NQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 581 ~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
+.|++.. .+.|+|||+.|..|-+.+|+=.|-
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999987 899999999999998988886653
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.022 Score=58.69 Aligned_cols=84 Identities=15% Similarity=0.183 Sum_probs=61.1
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
-++.|++.++++.|++.|+++.++|+- ..+..+-+.+|+.. +.+++. ..|... -+.+.+++.| .++
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~-~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPE-TFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChH-HHHHHHHHcCCCHHHeE
Confidence 368999999999999999999999987 55777788888751 233321 223221 2233444444 599
Q ss_pred EEcCCccCHHHHhhCCee
Q 001837 591 MIGDGINDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG 608 (1007)
||||..+|..+-++|++-
T Consensus 164 ~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMF 181 (185)
T ss_pred EEeCcHhhHHHHHHCCCe
Confidence 999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.021 Score=59.14 Aligned_cols=68 Identities=25% Similarity=0.368 Sum_probs=58.7
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccccccccccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGG 82 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~ 82 (1007)
..+|.| .|+|.+|+..|...|+..+||+++.++...+.+.|.- ...+.++.+.|+..|.++.++..|.
T Consensus 8 ~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~t---s~p~s~i~~~le~tGr~Avl~G~G~ 75 (247)
T KOG4656|consen 8 EAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVET---SVPPSEIQNTLENTGRDAVLRGAGK 75 (247)
T ss_pred eEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEc---cCChHHHHHHHHhhChheEEecCCc
Confidence 345555 4889999999999999999999999999999999983 3567999999999999988877654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.039 Score=69.77 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=90.8
Q ss_pred CCeEEEEEECCEEEEEEEec--CcccccHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCCCc--------------
Q 001837 502 GNTIGYIFSGASPVGIFCLS--DACRTGAAEAVNQLKS-LGIRTAMLTGDNQSAAMQAQEQLGNAL-------------- 564 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~--D~lR~~a~eaI~~Lr~-aGIkv~mlTGD~~~tA~~vA~~lGI~~-------------- 564 (1007)
..+.+++..|++++....-. ..+.+++.++|++|.+ .|+.|+++||............+++..
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~ 570 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE 570 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc
Confidence 45778888899988642111 2366899999999999 699999999999888877655444210
Q ss_pred -------c------------------------------eEE-------------------------------------ec
Q 001837 565 -------N------------------------------VVH-------------------------------------SE 570 (1007)
Q Consensus 565 -------~------------------------------~V~-------------------------------------ar 570 (1007)
+ .+. -.
T Consensus 571 w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~ve 650 (726)
T PRK14501 571 WQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVE 650 (726)
T ss_pred eEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEE
Confidence 0 000 11
Q ss_pred cCH--hHHHHHHHHHhhC-C--eEEEEcCCccCHHHHhhC---CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 571 LLP--EDKAKIINQFKQE-G--KTAMIGDGINDAPALATA---DIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 571 ~sP--eqK~~iV~~Lq~~-G--~VamVGDG~NDa~ALk~A---DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+.| -.|...++.+.+. + .|+++||+.||.+|++.+ ..+|+||. +..+|++.|. +...+..+++
T Consensus 651 V~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~--~~~eV~~~L~ 721 (726)
T PRK14501 651 VRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLP--SQREVRELLR 721 (726)
T ss_pred EEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCC--CHHHHHHHHH
Confidence 112 2577777776664 2 699999999999999996 58899983 2467888883 4455555543
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.046 Score=55.57 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=82.6
Q ss_pred CcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHH
Q 001837 497 GPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDK 576 (1007)
Q Consensus 497 ~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK 576 (1007)
.+...|.+-+.+.-|.+++..= ....-|++++=+++++.+|+++.++|..++..+..+++.+|++ -++--..|-.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~ 97 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGR 97 (175)
T ss_pred HHHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHH
Confidence 3445666667777777776542 2235678999999999999999999999999999999999999 77777777654
Q ss_pred HHHHHHHhhCC----eEEEEcCC-ccCHHHHhhCCe
Q 001837 577 AKIINQFKQEG----KTAMIGDG-INDAPALATADI 607 (1007)
Q Consensus 577 ~~iV~~Lq~~G----~VamVGDG-~NDa~ALk~ADV 607 (1007)
.+-++|++.+ .|+||||- ..|+-+-..|++
T Consensus 98 -~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 98 -AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 4667777765 59999998 578877666665
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.015 Score=58.60 Aligned_cols=89 Identities=16% Similarity=0.034 Sum_probs=67.1
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-cCHhHHHHHHHHHhhCC----eEEEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-LLPEDKAKIINQFKQEG----KTAMI 592 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-~sPeqK~~iV~~Lq~~G----~VamV 592 (1007)
.-.+||++.+.++.|+ .++++.++|.-....+..+-+.+++.. ..++++ -....|-.+++.+++.| .+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3457999999999999 579999999999999999999998852 233333 22222333666666654 59999
Q ss_pred cCCccCHHHHhhCCeeEE
Q 001837 593 GDGINDAPALATADIGIS 610 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVGIA 610 (1007)
||..+|..|-+++.|-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999998777766553
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.051 Score=54.55 Aligned_cols=86 Identities=24% Similarity=0.353 Sum_probs=60.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCcceEEe-cc-------CHhHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNALNVVHS-EL-------LPEDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~~~V~a-r~-------sPeqK~~i 579 (1007)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+....+|. .. ...-+.++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999998762 4556677888986322222 11 01223333
Q ss_pred HH-HHhhCC----eEEEEcCCccCHHHHhhCCee
Q 001837 580 IN-QFKQEG----KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 580 V~-~Lq~~G----~VamVGDG~NDa~ALk~ADVG 608 (1007)
++ .+++.| .++||||...|..+-+++++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 33 334444 599999999999999999873
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.042 Score=58.86 Aligned_cols=86 Identities=21% Similarity=0.223 Sum_probs=57.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHhCCCc--ceEE-ec--c------CHhHHHHHHHHHh---hC-
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM-QAQEQLGNAL--NVVH-SE--L------LPEDKAKIINQFK---QE- 586 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~-~vA~~lGI~~--~~V~-ar--~------sPeqK~~iV~~Lq---~~- 586 (1007)
++.|++.++|+.|++.|+++.++||-...... ...+..++.. +.++ +. - .|+-=...++.+. -.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 56899999999999999999999998765333 2333334431 1232 22 1 1222234445553 11
Q ss_pred CeEEEEcCCccCHHHHhhCCee
Q 001837 587 GKTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 587 G~VamVGDG~NDa~ALk~ADVG 608 (1007)
..++||||...|+.|-++|++-
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCe
Confidence 2599999999999999999973
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.094 Score=57.14 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=60.5
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHH--HHHHHhCCCc---ceEEeccCHhHHHHHHHHHhhC---C
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM--QAQEQLGNAL---NVVHSELLPEDKAKIINQFKQE---G 587 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~--~vA~~lGI~~---~~V~ar~sPeqK~~iV~~Lq~~---G 587 (1007)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+.. +.|+..- ......+.+.+++. +
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~-~~~~~~l~~~~~~~~~~~ 95 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG-EIAVQMILESKKRFDIRN 95 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-HHHHHHHHhhhhhccCCC
Confidence 344456778999999999999999999999986655444 5668899874 1222211 00112233333332 2
Q ss_pred -eEEEEcCCccCHHHHhhCC
Q 001837 588 -KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~AD 606 (1007)
.+.|+||+..|...+...+
T Consensus 96 ~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 96 GIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ceEEEeCCcccchhhhcCCC
Confidence 5999999999998886544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.076 Score=47.00 Aligned_cols=58 Identities=17% Similarity=0.362 Sum_probs=50.6
Q ss_pred EEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcc
Q 001837 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQAR 72 (1007)
Q Consensus 12 ~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aG 72 (1007)
.....-.|+|..|+..|++.|..+.||.++.++...++++|.-+ .++..+.+.+.+.+
T Consensus 6 ~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p~~vl~~l~k~~ 63 (73)
T KOG1603|consen 6 TVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDPVKLLKKLKKTG 63 (73)
T ss_pred EEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCHHHHHHHHHhcC
Confidence 34556689999999999999999999999999999999999855 56888888888754
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.076 Score=54.44 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=62.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHHHHhCCCcceE-Ee-----ccC--HhHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD---------------NQSAAMQAQEQLGNALNVV-HS-----ELL--PEDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD---------------~~~tA~~vA~~lGI~~~~V-~a-----r~s--PeqK~~i 579 (1007)
++-|++.+++++|++.|+++.++|.- ....+..+.+.+|+..+.+ ++ ... ..-|..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~ 108 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKL 108 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 46789999999999999999999974 2446677888888874333 33 111 0112333
Q ss_pred HHH-HhhCC----eEEEEcCCccCHHHHhhCCee-EEe
Q 001837 580 INQ-FKQEG----KTAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 580 V~~-Lq~~G----~VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
++. +++.| .+.||||+.+|..+-++|++- |.+
T Consensus 109 ~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 109 LEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 333 33333 599999999999999999984 444
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.071 Score=53.39 Aligned_cols=84 Identities=20% Similarity=0.349 Sum_probs=57.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCCcceEEeccC--HhHHHHH-HHHHhhCC---eEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL-GNALNVVHSELL--PEDKAKI-INQFKQEG---KTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l-GI~~~~V~ar~s--PeqK~~i-V~~Lq~~G---~VamVGDG 595 (1007)
+..+++.++++.|++.|+++.++|+-....+....+.. +-....++..-. +.-+..+ ...+++.| .++||||.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iGDs 143 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVGDN 143 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEeCC
Confidence 34589999999999999999999999999988888874 211123332211 1112233 33333434 58999999
Q ss_pred ccCHHHHhhCC
Q 001837 596 INDAPALATAD 606 (1007)
Q Consensus 596 ~NDa~ALk~AD 606 (1007)
.+|..|-++|+
T Consensus 144 ~~Di~aa~~aG 154 (154)
T TIGR01549 144 LNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcc
Confidence 99999887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.12 Score=53.26 Aligned_cols=105 Identities=11% Similarity=0.124 Sum_probs=68.1
Q ss_pred eEEEEEECCEEEEEE----EecCc-----ccccHHHHHHHHHHCCCeEEEEcCCCHH------------HHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGIF----CLSDA-----CRTGAAEAVNQLKSLGIRTAMLTGDNQS------------AAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli----~l~D~-----lR~~a~eaI~~Lr~aGIkv~mlTGD~~~------------tA~~vA~~lGI 562 (1007)
..+.+..|++++-.. ...++ +-|++.+++++|+++|+++.++|.-... .+..+.+.+|+
T Consensus 14 k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 14 KVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 456677888877432 11222 4599999999999999999999975542 45677889998
Q ss_pred CcceEE-ecc----CHh--HHHHHHHHHh--hC-CeEEEEcCCc--------cCHHHHhhCCee
Q 001837 563 ALNVVH-SEL----LPE--DKAKIINQFK--QE-GKTAMIGDGI--------NDAPALATADIG 608 (1007)
Q Consensus 563 ~~~~V~-ar~----sPe--qK~~iV~~Lq--~~-G~VamVGDG~--------NDa~ALk~ADVG 608 (1007)
....+. +.- .|. -=..+++.+. -. ..++||||.. +|..|-++|++-
T Consensus 94 ~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 94 PIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 642222 111 222 1123333333 11 2599999986 699988888764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.062 Score=58.39 Aligned_cols=87 Identities=28% Similarity=0.363 Sum_probs=65.9
Q ss_pred cccccHHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec----------------------cCH-hH
Q 001837 523 ACRTGAAEAVNQL--KSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE----------------------LLP-ED 575 (1007)
Q Consensus 523 ~lR~~a~eaI~~L--r~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar----------------------~sP-eq 575 (1007)
|+.|+.+++++.+ ++.|+.++++|.-|..--..+-+.-|+... .||++ +.| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678999999999 458999999999999999999999998632 22222 222 25
Q ss_pred HHHHHHHHhhC----C----eEEEEcCCccC-HHHHh--hCCeeE
Q 001837 576 KAKIINQFKQE----G----KTAMIGDGIND-APALA--TADIGI 609 (1007)
Q Consensus 576 K~~iV~~Lq~~----G----~VamVGDG~ND-a~ALk--~ADVGI 609 (1007)
|..+++.+++. | +|.+||||.|| +|+++ .+|+-.
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 99999988865 3 69999999999 45543 555543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.074 Score=55.91 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=58.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-c----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-E----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-r----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
.+.|++.++++.|++.|+++.++|+-... ...+.+.+|+.. +.++. . ..|+. .-+...+++.| .++|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~-~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDP-KIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCH-HHHHHHHHHcCCChhHEEE
Confidence 56799999999999999999999976554 467778888742 12322 1 12322 22333444444 5999
Q ss_pred EcCCc-cCHHHHhhCCe
Q 001837 592 IGDGI-NDAPALATADI 607 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADV 607 (1007)
|||.. +|..+-++|++
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 89999888876
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.24 Score=50.52 Aligned_cols=87 Identities=23% Similarity=0.202 Sum_probs=64.2
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHH---HHHHH---hC--CCcceEE--------------eccCHhH-HH
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM---QAQEQ---LG--NALNVVH--------------SELLPED-KA 577 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~---~vA~~---lG--I~~~~V~--------------ar~sPeq-K~ 577 (1007)
+|.+.|+++++++++++.|++++++||-....+. ....+ .| +....++ ..-.|+. |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3677899999999999999999999999988874 44445 23 4311111 1223544 88
Q ss_pred HHHHHHhhC----C--eEEEEcCCccCHHHHhhCCe
Q 001837 578 KIINQFKQE----G--KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 578 ~iV~~Lq~~----G--~VamVGDG~NDa~ALk~ADV 607 (1007)
..++.+++. + .++..||+.+|+.|.++++|
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 888888872 4 57789999999999988776
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.1 Score=59.52 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=69.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----hCCCcceEEeccCHhHHHHHHHHHhh-CC----eEEEEc
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ----LGNALNVVHSELLPEDKAKIINQFKQ-EG----KTAMIG 593 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~----lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G----~VamVG 593 (1007)
++.+++.++|++|++.|+++.++|.-+...|..+-+. +|+...-.+....++.|...++.+-+ .| .++|||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 4578999999999999999999999999999999998 88763222222334456665555433 33 699999
Q ss_pred CCccCHHHHhhCCeeEEe
Q 001837 594 DGINDAPALATADIGISM 611 (1007)
Q Consensus 594 DG~NDa~ALk~ADVGIAm 611 (1007)
|...|..+.+++...+.+
T Consensus 111 D~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 111 DNPAERANVKITLPVKTL 128 (320)
T ss_pred CCHHHHHHHHHHCCCCcc
Confidence 999999999998887655
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.15 Score=58.74 Aligned_cols=87 Identities=21% Similarity=0.248 Sum_probs=61.6
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHHHHhCCCcceEEecc--------CHhHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGD---------------NQSAAMQAQEQLGNALNVVHSEL--------LPEDKAK 578 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD---------------~~~tA~~vA~~lGI~~~~V~ar~--------sPeqK~~ 578 (1007)
-++.|++.+++++|++.|++++|+|.- ....+..+.+..|+..+.++... ...-|..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~ 108 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTG 108 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHH
Confidence 357899999999999999999999983 24456677888887643443221 1122333
Q ss_pred HHHH-HhhCC----eEEEEcCCccCHHHHhhCCee
Q 001837 579 IINQ-FKQEG----KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 579 iV~~-Lq~~G----~VamVGDG~NDa~ALk~ADVG 608 (1007)
++.. +++.+ .+.||||+.+|..+-+.|++-
T Consensus 109 ~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 109 LVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 4433 33332 699999999999999999984
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.14 Score=67.43 Aligned_cols=109 Identities=21% Similarity=0.282 Sum_probs=76.2
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEE-e----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVH-S----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~-a----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
+.||+.+.+++|+++|+++.++|+-....+..+-+.+|+.. +.++ + +..|+... +.+.+++.| .++|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~-~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI-FLAAAKILGVPTSECVV 240 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHH-HHHHHHHcCcCcccEEE
Confidence 57999999999999999999999999999999989999851 2332 2 22332221 123344443 5999
Q ss_pred EcCCccCHHHHhhCCe-eEEeCC--CCcHHHHhhcCEEEecCCcchH
Q 001837 592 IGDGINDAPALATADI-GISMGI--SGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAmg~--~gs~~A~~aADiVLl~~~l~~I 635 (1007)
|||..+|+.|-++|++ -|.+.. ...+.....+|+++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999997 344431 11233445678887 556554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.17 Score=56.15 Aligned_cols=80 Identities=14% Similarity=0.204 Sum_probs=59.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHhCCCc---ceEEeccCHhHHHHHHHHHhhC-CeEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDN---QSAAMQAQEQLGNAL---NVVHSELLPEDKAKIINQFKQE-GKTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~---~~tA~~vA~~lGI~~---~~V~ar~sPeqK~~iV~~Lq~~-G~VamVGDG 595 (1007)
++-|++.+.++.|++.|+++.++|+-. ...+...-+..|+.. +.++.|-....|..-.+.+.+. ++++||||-
T Consensus 118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~ 197 (266)
T TIGR01533 118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFGDN 197 (266)
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEECCC
Confidence 467899999999999999999999966 344456667789863 3566554334566666666544 489999999
Q ss_pred ccCHHHH
Q 001837 596 INDAPAL 602 (1007)
Q Consensus 596 ~NDa~AL 602 (1007)
.+|....
T Consensus 198 ~~Df~~~ 204 (266)
T TIGR01533 198 LLDFDDF 204 (266)
T ss_pred HHHhhhh
Confidence 9998653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.18 Score=54.56 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=59.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHhCCCc-ceEEeccC-HhH------HHHHHHHHhhCC--eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSA---AMQAQEQLGNAL-NVVHSELL-PED------KAKIINQFKQEG--KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t---A~~vA~~lGI~~-~~V~ar~s-Peq------K~~iV~~Lq~~G--~V 589 (1007)
|.-|++.++++.|++.|++|+++||-.... +..--++.|++. +.++-|-. ... |...=+.+.+.| ++
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv 199 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIW 199 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEE
Confidence 567899999999999999999999998765 334445678874 45555531 112 777777788788 78
Q ss_pred EEEcCCccCHH
Q 001837 590 AMIGDGINDAP 600 (1007)
Q Consensus 590 amVGDG~NDa~ 600 (1007)
+.+||-.+|..
T Consensus 200 ~~iGDq~sDl~ 210 (229)
T TIGR01675 200 GNIGDQWSDLL 210 (229)
T ss_pred EEECCChHHhc
Confidence 99999999863
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.28 Score=57.06 Aligned_cols=66 Identities=26% Similarity=0.327 Sum_probs=47.2
Q ss_pred ccCHh---HHHHHHHHHhhC-C-------eEEEEcCCccCHHHHhh-----CCeeEEeCCCCcHHHHhhcCEEEecCCcc
Q 001837 570 ELLPE---DKAKIINQFKQE-G-------KTAMIGDGINDAPALAT-----ADIGISMGISGSALATETGQVILMSNDIR 633 (1007)
Q Consensus 570 r~sPe---qK~~iV~~Lq~~-G-------~VamVGDG~NDa~ALk~-----ADVGIAmg~~gs~~A~~aADiVLl~~~l~ 633 (1007)
++.|. +|...|+.|.+. | .++++||+.||..|++. +++||+|| ++.. ...|++.| ++..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L--~dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSL--RDPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEc--CCHH
Confidence 44553 788888877654 3 14899999999999996 58999998 3332 22577777 6777
Q ss_pred hHHHHHH
Q 001837 634 KVPEAIR 640 (1007)
Q Consensus 634 ~I~~lI~ 640 (1007)
.+..+++
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 7776664
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.4 Score=50.84 Aligned_cols=56 Identities=14% Similarity=0.178 Sum_probs=42.6
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.+++...|+++++ =+.+ -..+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 8 ~lIFtDlD~TLl~-~~ye---~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 8 LLIFTDLDGTLLP-HSYE---WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred eEEEEcccCcccC-CCCC---CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4566666777766 2222 235788999999999999999988887777888888876
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.28 Score=52.89 Aligned_cols=89 Identities=18% Similarity=0.157 Sum_probs=61.5
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCCc--ceEEec---cCH--hHHHHHHHHHhhCC-e
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL---GNAL--NVVHSE---LLP--EDKAKIINQFKQEG-K 588 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l---GI~~--~~V~ar---~sP--eqK~~iV~~Lq~~G-~ 588 (1007)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.. +.+|.. ..| +-=..+++.+.-.. .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 34568999999999999999999999998888777766664 2221 122321 122 22233333333222 5
Q ss_pred EEEEcCCccCHHHHhhCCee
Q 001837 589 TAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVG 608 (1007)
++||||...|+.|-++|++-
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLH 191 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCE
Confidence 99999999999999999984
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.21 Score=49.08 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=56.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhC-------CCc---ceEEeccCHhHH--HHHHHHHh--hCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD-NQSAAMQAQEQLG-------NAL---NVVHSELLPEDK--AKIINQFK--QEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD-~~~tA~~vA~~lG-------I~~---~~V~ar~sPeqK--~~iV~~Lq--~~G 587 (1007)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..| +.. ..+.++-.|..+ ..+++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 68999999999999999999999999 7887877777777 221 122232334333 22233333 222
Q ss_pred -eEEEEcCCccCHHHHhh
Q 001837 588 -KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ 604 (1007)
.++||||...|..+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 59999999999877653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.15 Score=54.49 Aligned_cols=37 Identities=41% Similarity=0.546 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
.|...++.+.+. | .|+++||+.||.+||+.|+.|||+
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 477777776554 4 599999999999999999999987
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.26 Score=50.85 Aligned_cols=104 Identities=22% Similarity=0.176 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCe--EEEEcCC-------CHHHHHHHHHHhCCCcceE-
Q 001837 498 PKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIR--TAMLTGD-------NQSAAMQAQEQLGNALNVV- 567 (1007)
Q Consensus 498 ~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk--v~mlTGD-------~~~tA~~vA~~lGI~~~~V- 567 (1007)
+...|.+.+.+..|.++.. --++.+.|+..+.+++|++.+.. +.++|-- +...|..+++.+||. .+
T Consensus 36 Lk~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEE
Confidence 3445666666666665422 24677889999999999999874 9999976 489999999999987 65
Q ss_pred EeccCHhHHHHHHHHHhhC-----C-eEEEEcCC-ccCHHHHhhC
Q 001837 568 HSELLPEDKAKIINQFKQE-----G-KTAMIGDG-INDAPALATA 605 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~-----G-~VamVGDG-~NDa~ALk~A 605 (1007)
+..-.|.-..++++.++.. - .++||||- ..|+-+-...
T Consensus 112 h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~ 156 (168)
T PF09419_consen 112 HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRM 156 (168)
T ss_pred eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhcc
Confidence 4456897778899988765 2 69999997 5665554443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.58 Score=51.64 Aligned_cols=48 Identities=25% Similarity=0.518 Sum_probs=34.7
Q ss_pred EEEEecCc----ccccHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHHhCCC
Q 001837 516 GIFCLSDA----CRTGAAEAVNQLKSLGIRTAMLTGDNQSAA---MQAQEQLGNA 563 (1007)
Q Consensus 516 Gli~l~D~----lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA---~~vA~~lGI~ 563 (1007)
|.+.-.+. +-|++.++|++|+++|++++++||.+..+. ....+++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 33344455 788999999999999999999998766653 3333445654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.64 Score=51.11 Aligned_cols=45 Identities=18% Similarity=0.330 Sum_probs=38.5
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
|.+.-.+.+-|++.++|++|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 455556788899999999999999999999999988887777664
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.15 Score=53.92 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=57.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----e
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSA--AMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----K 588 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t--A~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~ 588 (1007)
-++.|++.+++++|++.|+++.++|...... ........++.. +.|+.. ..|+-. -+...+++.| .
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~-~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPR-IYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHH-HHHHHHHHcCCCHHH
Confidence 3578999999999999999999999865432 322233344421 133321 133322 1223334433 5
Q ss_pred EEEEcCCccCHHHHhhCCee-EEe
Q 001837 589 TAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
++||||...|+.+-++|++- |.+
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v 195 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKV 195 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEE
Confidence 99999999999999999983 444
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.24 Score=54.11 Aligned_cols=70 Identities=23% Similarity=0.291 Sum_probs=50.3
Q ss_pred eEEeccCHhHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhC--------CeeEEeCCCCcHHHHhhcCEEEecCCc
Q 001837 566 VVHSELLPEDKAKIINQFKQE-G----KTAMIGDGINDAPALATA--------DIGISMGISGSALATETGQVILMSNDI 632 (1007)
Q Consensus 566 ~V~ar~sPeqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~A--------DVGIAmg~~gs~~A~~aADiVLl~~~l 632 (1007)
.+-.+-.+-+|...++.+.+. + .++|+||+.||.+|++.+ ..+|.|+ .+. .+..|++++ ++.
T Consensus 158 ~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~--~~~ 232 (244)
T TIGR00685 158 VVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHL--TGP 232 (244)
T ss_pred EEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeC--CCH
Confidence 334445566898888887654 3 699999999999999998 4788885 232 355688887 567
Q ss_pred chHHHHHH
Q 001837 633 RKVPEAIR 640 (1007)
Q Consensus 633 ~~I~~lI~ 640 (1007)
..+..++.
T Consensus 233 ~~v~~~L~ 240 (244)
T TIGR00685 233 QQVLEFLG 240 (244)
T ss_pred HHHHHHHH
Confidence 76666553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.37 Score=50.43 Aligned_cols=84 Identities=17% Similarity=0.113 Sum_probs=56.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-------ceEEeccCHhHHHHHHH-HHhhCC--eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL-------NVVHSELLPEDKAKIIN-QFKQEG--KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~-------~~V~ar~sPeqK~~iV~-~Lq~~G--~VamV 592 (1007)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+.. ..+.++.... |..++. .+++.| .++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhCCCcEEEe
Confidence 46899999999999975 567777655455554556666541 1122333321 344433 444446 68999
Q ss_pred cCCccCHHHHhhC--Cee
Q 001837 593 GDGINDAPALATA--DIG 608 (1007)
Q Consensus 593 GDG~NDa~ALk~A--DVG 608 (1007)
||..+|..|-++| +|-
T Consensus 152 gDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLP 169 (197)
T ss_pred CCCHHHHHHHHHHHcCCc
Confidence 9999999999999 884
|
2 hypothetical protein; Provisional |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.39 Score=52.70 Aligned_cols=44 Identities=23% Similarity=0.380 Sum_probs=34.9
Q ss_pred hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHH
Q 001837 574 EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSAL 618 (1007)
Q Consensus 574 eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~ 618 (1007)
..|...|+.|+++ + .|+++||..||.+||..++-||.+| +....
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 5699999988876 4 5888999999999999999999998 44433
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.29 Score=51.95 Aligned_cols=88 Identities=22% Similarity=0.345 Sum_probs=64.7
Q ss_pred cccccHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCCcceEEe--------------------------ccCHh-
Q 001837 523 ACRTGAAEAVNQLKSLGI-RTAMLTGDNQSAAMQAQEQLGNALNVVHS--------------------------ELLPE- 574 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGI-kv~mlTGD~~~tA~~vA~~lGI~~~~V~a--------------------------r~sPe- 574 (1007)
|+-|+..++|+.+++.|- .++++|.-|..--..+-+..||. ..|+ ...|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~--d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH--DLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH--HHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 567899999999999986 99999999999999999988875 1111 11232
Q ss_pred -HHHHHHHHHhhC----C----eEEEEcCCccC-HHHHhhCCeeEEeC
Q 001837 575 -DKAKIINQFKQE----G----KTAMIGDGIND-APALATADIGISMG 612 (1007)
Q Consensus 575 -qK~~iV~~Lq~~----G----~VamVGDG~ND-a~ALk~ADVGIAmg 612 (1007)
=|..++..++.. | ++.++|||.|| +|.++...--++|-
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 277777777643 3 58999999999 56665554444554
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.52 Score=53.49 Aligned_cols=96 Identities=17% Similarity=0.137 Sum_probs=63.8
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHhCCCcc--eEEeccCHhHHHHH
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ---EQLGNALN--VVHSELLPEDKAKI 579 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA---~~lGI~~~--~V~ar~sPeqK~~i 579 (1007)
.+.+-.||++ .-.+.+=|++.++|++|++.|++++++|+....+...++ +.+|+... .|+.... .+
T Consensus 30 ~~~~D~DGtl----~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~-----~~ 100 (311)
T PLN02645 30 TFIFDCDGVI----WKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF-----AA 100 (311)
T ss_pred EEEEeCcCCe----EeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH-----HH
Confidence 4445555554 345667799999999999999999999999977766666 56777522 3433322 22
Q ss_pred HHHHhhC----CeEEEEcCCccCHHHHhhCCeeE
Q 001837 580 INQFKQE----GKTAMIGDGINDAPALATADIGI 609 (1007)
Q Consensus 580 V~~Lq~~----G~VamVGDG~NDa~ALk~ADVGI 609 (1007)
...|++. +.-+++++...|..+++.+++=+
T Consensus 101 ~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 101 AAYLKSINFPKDKKVYVIGEEGILEELELAGFQY 134 (311)
T ss_pred HHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEE
Confidence 2223321 23456666678889999887644
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.72 E-value=1.5 Score=50.64 Aligned_cols=55 Identities=15% Similarity=0.078 Sum_probs=44.2
Q ss_pred CCeEEEEEECCEEEEEEEecC--cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Q 001837 502 GNTIGYIFSGASPVGIFCLSD--ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ 557 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D--~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA 557 (1007)
....+++..||+++-+..-.| .+-++..++|++|+ .|+.++++||........+.
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 356677788999987776444 37889999999999 78999999999888877663
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.5 Score=49.67 Aligned_cols=85 Identities=19% Similarity=0.229 Sum_probs=56.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCCCc--ceEE-ec----cCHhHHHHHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ-LGNAL--NVVH-SE----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~-lGI~~--~~V~-ar----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
++.|++.+++++|++.|+++.++|.-+.......-.. .++.. +.++ +. ..|.- .-+-..+++.| .++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p-~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEA-RIYQHVLQAEGFSAADAV 162 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCH-HHHHHHHHHcCCChhHeE
Confidence 4789999999999999999999998776655433222 23321 1222 21 23321 11223344444 599
Q ss_pred EEcCCccCHHHHhhCCee
Q 001837 591 MIGDGINDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG 608 (1007)
||||...|+.+-++|++-
T Consensus 163 ~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 163 FFDDNADNIEAANALGIT 180 (199)
T ss_pred EeCCCHHHHHHHHHcCCE
Confidence 999999999999999884
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=90.03 E-value=0.36 Score=45.51 Aligned_cols=86 Identities=20% Similarity=0.308 Sum_probs=53.6
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHhCCCcc--eEEeccCHhHHHHHHHHHhh-C-C-
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ---EQLGNALN--VVHSELLPEDKAKIINQFKQ-E-G- 587 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA---~~lGI~~~--~V~ar~sPeqK~~iV~~Lq~-~-G- 587 (1007)
|++...+.+=|++.++|++|+++|++++++|.....+...++ +.+|+..+ .|+... ....+.|++ . +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~-----~~~~~~l~~~~~~~ 81 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG-----MAAAEYLKEHKGGK 81 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH-----HHHHHHHHHHTTSS
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH-----HHHHHHHHhcCCCC
Confidence 344457888999999999999999999999988766555444 56787632 333221 233445555 2 3
Q ss_pred eEEEEcCCccCHHHHhhCCe
Q 001837 588 KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADV 607 (1007)
+|.++|.. .....|+.+++
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 88888865 44455555543
|
... |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.02 E-value=0.81 Score=48.76 Aligned_cols=85 Identities=11% Similarity=0.097 Sum_probs=60.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEec-cCHhHH--HH-HHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHSE-LLPEDK--AK-IINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~ar-~sPeqK--~~-iV~~Lq~~G----~Vam 591 (1007)
++.|++.++++.| ++++.++|+.....+...-+..|+... .+++. -....| .. +...+++.| .++|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 4678999999998 499999999998888888888888621 23222 111112 22 233344444 5999
Q ss_pred EcCCccCHHHHhhCCeeEE
Q 001837 592 IGDGINDAPALATADIGIS 610 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVGIA 610 (1007)
|||..+|..+-++|++-..
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred EeCcHhhHHHHHHCCCEEE
Confidence 9999999999999997654
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.89 E-value=0.86 Score=47.08 Aligned_cols=82 Identities=16% Similarity=0.100 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCH--hHHHHHHHHHhhCC-eEEEEcC
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLP--EDKAKIINQFKQEG-KTAMIGD 594 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sP--eqK~~iV~~Lq~~G-~VamVGD 594 (1007)
-| ..++++.|++. +++.++|+.....+..+-+.+|+.. +.|++. -.| +-=..+.+.+.... .++||||
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igD 167 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence 44 46899999875 8999999999999999999999862 233322 112 22223333333222 5999999
Q ss_pred CccCHHHHhhCCee
Q 001837 595 GINDAPALATADIG 608 (1007)
Q Consensus 595 G~NDa~ALk~ADVG 608 (1007)
..+|+.+-++|++-
T Consensus 168 s~~di~aA~~aG~~ 181 (188)
T PRK10725 168 ADFGIQAARAAGMD 181 (188)
T ss_pred cHhhHHHHHHCCCE
Confidence 99999999999873
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.48 E-value=0.62 Score=50.62 Aligned_cols=79 Identities=23% Similarity=0.265 Sum_probs=58.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHHhCCCc-ceEEeccCH--------hHHHHHHHHHhhCC--e
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---SAAMQAQEQLGNAL-NVVHSELLP--------EDKAKIINQFKQEG--K 588 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---~tA~~vA~~lGI~~-~~V~ar~sP--------eqK~~iV~~Lq~~G--~ 588 (1007)
+.=|++.+.++.+++.|++|+.|||-+. ..+..--++.|+.. +.++-|-.. +-|...-+.+++.| +
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 4457899999999999999999998543 34445556778764 344433322 24888888898887 7
Q ss_pred EEEEcCCccCHHH
Q 001837 589 TAMIGDGINDAPA 601 (1007)
Q Consensus 589 VamVGDG~NDa~A 601 (1007)
++++||-.+|...
T Consensus 195 i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 195 IANIGDQLSDFSG 207 (229)
T ss_dssp EEEEESSGGGCHC
T ss_pred EEEeCCCHHHhhc
Confidence 8999999999764
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=89.46 E-value=1.3 Score=56.84 Aligned_cols=58 Identities=3% Similarity=-0.016 Sum_probs=44.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcccccHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Q 001837 501 KGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL-KSLGIRTAMLTGDNQSAAMQAQE 558 (1007)
Q Consensus 501 ~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~L-r~aGIkv~mlTGD~~~tA~~vA~ 558 (1007)
...+.+++..||+++-.-...-.+.+++.+++++| ++.|+.++++||....+....-.
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34567778889988844333335668999999998 67899999999998887766543
|
|
| >PRK14054 methionine sulfoxide reductase A; Provisional | Back alignment and domain information |
|---|
Probab=88.84 E-value=1.1 Score=46.42 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCCe-------------------EEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSRT-------------------VIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~t-------------------v~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|.+|..+..++||.++.+=+..+. |.|.|||..++.++|++..-..
T Consensus 10 gGCFWg~E~~f~~~~GV~~t~vGYagG~~~~PtY~~Vcsg~tgh~E~V~V~yDp~~isy~~Ll~~f~~~ 78 (172)
T PRK14054 10 GGCFWGMEAPFDRVKGVISTRVGYTGGHVENPTYEQVCSGTTGHAEAVEITYDPAVISYRELLELFFQI 78 (172)
T ss_pred cCChhhhHHHHccCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 7899999999999999999998887765 8999999999999998887654
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=88.71 E-value=0.9 Score=46.97 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=59.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec---------cCHhHHHHHHHHHhhCC----
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE---------LLPEDKAKIINQFKQEG---- 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar---------~sPeqK~~iV~~Lq~~G---- 587 (1007)
++.+++.+++++|+ .+++++|.-+...+..+.+.+|+.. +.+++. ..|.. .-+...+++.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p-~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSP-QAYEKALREAGVDPE 159 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCH-HHHHHHHHHhCCCcc
Confidence 36789999999998 4799999999999999999999852 233332 13422 12233334333
Q ss_pred eEEEEcCCccCHHHHhhCCee
Q 001837 588 KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVG 608 (1007)
.++||||...|..+-++|++-
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCE
Confidence 589999999999998988874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=87.91 E-value=17 Score=40.50 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=49.1
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHH--------------HHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eE
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAA--------------MQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA--------------~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~V 589 (1007)
-+++.++++.|++.|+ +.++|.-..... ..+....|-. ......-.|+-=..+++.+.-.. .+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-PLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-eeccCCCCHHHHHHHHHHhCCChhhE
Confidence 6789999999999898 566765332111 0111111211 01122334443334444443233 79
Q ss_pred EEEcCCc-cCHHHHhhCCee-EEe
Q 001837 590 AMIGDGI-NDAPALATADIG-ISM 611 (1007)
Q Consensus 590 amVGDG~-NDa~ALk~ADVG-IAm 611 (1007)
+||||.. .|..+-++|++- |.+
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEE
Confidence 9999995 999999999873 444
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.74 E-value=2.4 Score=44.77 Aligned_cols=51 Identities=24% Similarity=0.414 Sum_probs=42.2
Q ss_pred EEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HhCCCc
Q 001837 514 PVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE---QLGNAL 564 (1007)
Q Consensus 514 ~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~---~lGI~~ 564 (1007)
+-|.+.++|..-|++.|+++.||+++++|..+|.-....-+.+.+ ++|++.
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 468999999999999999999999999999998777666666655 456543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=87.65 E-value=2.8 Score=46.00 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=35.5
Q ss_pred EEecCcccccHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTG---DNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG---D~~~tA~~vA~~lGI~ 563 (1007)
+.-.+.+-|++.++|++|++.|++++++|| ..........+++|+.
T Consensus 12 l~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 12 MYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 334566677999999999999999999997 5566666666666654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=87.09 E-value=0.47 Score=51.92 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=41.9
Q ss_pred ccCH--hHHHHHHHHHhhCC-eEEEEcC----CccCHHHHhhC-CeeEEeCCCCcHHHHhhcC
Q 001837 570 ELLP--EDKAKIINQFKQEG-KTAMIGD----GINDAPALATA-DIGISMGISGSALATETGQ 624 (1007)
Q Consensus 570 r~sP--eqK~~iV~~Lq~~G-~VamVGD----G~NDa~ALk~A-DVGIAmg~~gs~~A~~aAD 624 (1007)
.+.| -.|..-|+.|.+.- .|+++|| |.||.+||+.| -.|+++. +..+..+..+.
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 4444 46999999998875 8999999 99999999977 5788886 55555555443
|
|
| >PRK00058 methionine sulfoxide reductase A; Provisional | Back alignment and domain information |
|---|
Probab=86.84 E-value=1.5 Score=46.85 Aligned_cols=50 Identities=22% Similarity=0.176 Sum_probs=44.1
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCC-------------------CeEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPS-------------------RTVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t-------------------~tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+.+++||.++++=+.. +.|.|.|||..++.++|++..-..
T Consensus 52 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~VcsG~tgH~EaV~V~YDp~~ISy~~LL~~Ff~~ 120 (213)
T PRK00058 52 MGCFWGAERLFWQLPGVYSTAVGYAGGYTPNPTYREVCSGRTGHAEVVRVVYDPAVISYEQLLQVFWEN 120 (213)
T ss_pred ccCcchhHHHHhcCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCccCCHHHHHHHHHHh
Confidence 78999999999999999999998873 348999999999999998888653
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.48 E-value=1.7 Score=47.19 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=52.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-ec----cCHhHHHHHH-HHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SE----LLPEDKAKII-NQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar----~sPeqK~~iV-~~Lq~~G----~Va 590 (1007)
++-|++.+++++|++. +++.++|.-+.. .+..|+.. +.++ +. ..|. ..+. ..+++.| .++
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~--p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPF--SDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCc--HHHHHHHHHHcCCChhHEE
Confidence 4668999999999975 999999985544 25667642 1222 22 1232 2232 3333433 599
Q ss_pred EEcCC-ccCHHHHhhCCee
Q 001837 591 MIGDG-INDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG-~NDa~ALk~ADVG 608 (1007)
||||. ..|+.+-++|++-
T Consensus 185 ~VGD~~~~Di~~A~~aG~~ 203 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQ 203 (238)
T ss_pred EEcCCcHHHHHHHHHCCCe
Confidence 99999 5999999999874
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=85.99 E-value=0.54 Score=48.21 Aligned_cols=88 Identities=11% Similarity=0.021 Sum_probs=63.1
Q ss_pred EecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEeccC-HhHHHHHHHHHhhCC----eEE
Q 001837 519 CLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSELL-PEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 519 ~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar~s-PeqK~~iV~~Lq~~G----~Va 590 (1007)
.+.=..||++.+.+++|.+. +++++.|--....|..+.+.++... ..+++|-. ...|..+++.|...| .|.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vI 116 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVI 116 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEE
Confidence 34446899999999999988 9999999999999999999999763 12333321 111222556666544 699
Q ss_pred EEcCCccCHHHHhhCCe
Q 001837 591 MIGDGINDAPALATADI 607 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADV 607 (1007)
||||...|..+-.++.|
T Consensus 117 iVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 117 IIDNSPYSYSLQPDNAI 133 (162)
T ss_pred EEeCChhhhccCccCEe
Confidence 99999988765555544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02052 MerP mercuric transport protein periplasmic component | Back alignment and domain information |
|---|
Probab=85.66 E-value=4.9 Score=35.40 Aligned_cols=64 Identities=19% Similarity=0.336 Sum_probs=49.1
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
+..+.+.++.|..|...++..+...+++..+.++....+..+.+++.......+...+...++.
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYP 87 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4567899999999999999999999999999999999988887765433444444444555554
|
This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403). |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.82 E-value=3.5 Score=50.19 Aligned_cols=101 Identities=10% Similarity=0.068 Sum_probs=66.0
Q ss_pred eEEEEEECCEEEEE----EEecCc-----ccccHHHHHHHHHHCCCeEEEEcCCCH------------HHHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGI----FCLSDA-----CRTGAAEAVNQLKSLGIRTAMLTGDNQ------------SAAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGl----i~l~D~-----lR~~a~eaI~~Lr~aGIkv~mlTGD~~------------~tA~~vA~~lGI 562 (1007)
.+.++..|++++-. ....|+ +-|++.++|++|++.|++++|+|.-.. ..+..+.+++|+
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 46677788877632 222332 469999999999999999999997444 357788899998
Q ss_pred CcceEEecc-----C--HhHHHHHHHHHhh---C--CeEEEEcCCccCHHHHhh
Q 001837 563 ALNVVHSEL-----L--PEDKAKIINQFKQ---E--GKTAMIGDGINDAPALAT 604 (1007)
Q Consensus 563 ~~~~V~ar~-----s--PeqK~~iV~~Lq~---~--G~VamVGDG~NDa~ALk~ 604 (1007)
....+++-- . |.-=..+++.+.. - ..+.||||...|..+-+.
T Consensus 249 pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 249 PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 755444321 1 2222223333321 1 158999999999876443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.44 E-value=7.6 Score=41.21 Aligned_cols=114 Identities=19% Similarity=0.226 Sum_probs=73.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEe----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHS----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~a----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++-+++.+++++|++. ++++++|.-....+....+++|+... .+.+ ...| ++.-.-..+++.| .++|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP-~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKP-DPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCC-CcHHHHHHHHHcCCCcceEEE
Confidence 5678899999999999 99999998788888999999996532 2222 2344 3344555556555 5999
Q ss_pred EcCC-ccCHHHHhhCCe-eEEeCCCCcHH--HHhhcCEEEecCCcchHHHHHH
Q 001837 592 IGDG-INDAPALATADI-GISMGISGSAL--ATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 592 VGDG-~NDa~ALk~ADV-GIAmg~~gs~~--A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
|||. .||..+-+++++ +|-+...+... .....|..+ .++..+..++.
T Consensus 177 VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~~ 227 (229)
T COG1011 177 VGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLLE 227 (229)
T ss_pred ECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHHh
Confidence 9996 677466677766 44443222111 114455555 45666655543
|
|
| >PRK13014 methionine sulfoxide reductase A; Provisional | Back alignment and domain information |
|---|
Probab=82.97 E-value=2.4 Score=44.49 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=48.5
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCe-------------------EEEEEcCCcccHHHHHHHh
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRT-------------------VIVLHDALLISQHQIVKAL 68 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~t-------------------v~V~~D~~~~s~~~I~~aL 68 (1007)
.+.+++|- .+|-|-+|..+.+++||.++++=+..+. |.|.|||..++.++|++..
T Consensus 7 ~~~~a~~a------gGCFWg~E~~f~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~tgH~E~V~V~yDp~~iSy~~LL~~F 80 (186)
T PRK13014 7 GMETATFA------GGCFWGVEGVFQHVPGVVSVVSGYSGGHVDNPTYEQVCTGTTGHAEAVQITYDPKQVSYENLLQIF 80 (186)
T ss_pred CccEEEEe------cCCceeeHHHHccCCCEEEEEeeecCCCCCCCChhhhcCCCCCceEEEEEEECCCcCCHHHHHHHH
Confidence 34455554 7899999999999999999998877664 8999999999999998887
Q ss_pred hhc
Q 001837 69 NQA 71 (1007)
Q Consensus 69 ~~a 71 (1007)
-..
T Consensus 81 f~~ 83 (186)
T PRK13014 81 FST 83 (186)
T ss_pred HHh
Confidence 654
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.89 E-value=4.3 Score=49.25 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=31.5
Q ss_pred ecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece
Q 001837 202 AGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237 (1007)
Q Consensus 202 ~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~ 237 (1007)
.||| .++|..-||.||||-++||+.-||.+.=.+++
T Consensus 161 fRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 161 FRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred hccCeeeecceeEEEeccEEEecCCccccccccccCCC
Confidence 4899 78999999999999999999999987666653
|
|
| >PRK05528 methionine sulfoxide reductase A; Provisional | Back alignment and domain information |
|---|
Probab=81.68 E-value=2.8 Score=42.82 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=43.2
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCC--------------eEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSR--------------TVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~--------------tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+.+++||.++++=+..+ .|.|.|||..+|.++|++..-..
T Consensus 8 gGCFWg~E~~f~~l~GV~~t~vGYagG~~~~p~~~~tgH~E~V~V~yDp~~isy~~LL~~f~~~ 71 (156)
T PRK05528 8 GGCLWGVQAFFKTLPGVIHTEAGRANGRTSTLDGPYDGYAECVKTHFDPRMVSITDLMGYLFEI 71 (156)
T ss_pred cCCchhhHHHHhcCCCEEEEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCcCCHHHHHHHHHHh
Confidence 789999999999999999999866543 48899999999999998877653
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=81.62 E-value=11 Score=42.02 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=59.4
Q ss_pred EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HHHHhCCCcc--eEEeccCHhHHHHHH
Q 001837 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQ---AQEQLGNALN--VVHSELLPEDKAKII 580 (1007)
Q Consensus 506 i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~---vA~~lGI~~~--~V~ar~sPeqK~~iV 580 (1007)
+.+-.|+++ .-.+.+-|++.++|++|++.|++++++|+....+... --+++|+... .++. |. ....
T Consensus 5 ~~~D~DGtl----~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t---s~--~~~~ 75 (279)
T TIGR01452 5 FIFDCDGVL----WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS---SA--LCAA 75 (279)
T ss_pred EEEeCCCce----EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec---HH--HHHH
Confidence 344455555 3356778899999999999999999999965443333 3356787522 2221 11 1223
Q ss_pred HHHhhC---C-eEEEEcCCccCHHHHhhCCeeEE
Q 001837 581 NQFKQE---G-KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 581 ~~Lq~~---G-~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
+.|++. + .|.++|+. .....|+.+++-+.
T Consensus 76 ~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 76 RLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 445542 3 79999985 23456777766543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0225 MsrA Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.34 E-value=3.9 Score=42.20 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=48.4
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCC-------------------eEEEEEcCCcccHHHHHHHh
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSR-------------------TVIVLHDALLISQHQIVKAL 68 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~-------------------tv~V~~D~~~~s~~~I~~aL 68 (1007)
.+.+..|- .+|-|-+|+.+.++|||.++.+=+..+ .|.|.|||..++.++|++..
T Consensus 5 ~~~~a~fa------gGCFWg~E~~f~~i~GV~~t~~GYagG~~~nptY~~Vcsg~TgHaE~V~V~yDp~~isy~~LL~~f 78 (174)
T COG0225 5 GMEKAYFA------GGCFWGVEAYFEQIPGVLSTVSGYAGGHTPNPTYEEVCSGTTGHAEAVEVTYDPKVISYEELLEVF 78 (174)
T ss_pred CcEEEEEe------ccCccchHHHHhhCCCeEEEeeeEcCCCCCCCChhhccCCCCCceEEEEEEeCCccccHHHHHHHH
Confidence 34555555 789999999999999999999766554 57899999999999999988
Q ss_pred hhc
Q 001837 69 NQA 71 (1007)
Q Consensus 69 ~~a 71 (1007)
-+.
T Consensus 79 f~i 81 (174)
T COG0225 79 FEI 81 (174)
T ss_pred hee
Confidence 765
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.32 E-value=9.5 Score=42.51 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=70.6
Q ss_pred EEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhH----HHHHHHHHhhC---C
Q 001837 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPED----KAKIINQFKQE---G 587 (1007)
Q Consensus 515 lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeq----K~~iV~~Lq~~---G 587 (1007)
=|++.-.+.+=|++.++|++|+++|++++.||.....+...+++++.-. ...+.+|++ =......|++. +
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~---~~~~~~~~~i~TS~~at~~~l~~~~~~~ 92 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSL---GGVDVTPDDIVTSGDATADYLAKQKPGK 92 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhh---cCCCCCHHHeecHHHHHHHHHHhhCCCC
Confidence 4677788899999999999999999999999999888888666655310 011223322 11223334443 3
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
+|.++|. ..+...|+.+++-+.-. . .+ ...|+|++..|
T Consensus 93 kv~viG~-~~l~~~l~~~G~~~~~~-~-~~---~~~d~Vv~g~d 130 (269)
T COG0647 93 KVYVIGE-EGLKEELEGAGFELVDE-E-EP---ARVDAVVVGLD 130 (269)
T ss_pred EEEEECC-cchHHHHHhCCcEEecc-C-CC---CcccEEEEecC
Confidence 8999994 44567889998877542 1 11 11566666544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1007 | ||||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-72 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-69 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-64 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-38 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-37 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-34 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-33 | ||
| 2kkh_A | 95 | Structure Of The Zinc Binding Domain Of The Atpase | 5e-31 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 4e-30 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 6e-22 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-21 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-21 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-15 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-14 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 3e-14 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-13 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-10 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-11 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-08 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-10 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-10 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-10 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-10 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 6e-10 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-09 |
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2KKH|A Chain A, Structure Of The Zinc Binding Domain Of The Atpase Hma4 Length = 95 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1007 | |||
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-161 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-147 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-143 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-84 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-82 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-79 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 6e-33 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-31 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 5e-25 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-31 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-24 | |
| 2kkh_A | 95 | Putative heavy metal transporter; zinc transport, | 3e-25 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-18 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-10 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-18 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 6e-15 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-17 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-15 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 2e-15 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 9e-13 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 7e-09 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 4e-08 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 2e-06 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 5e-08 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 3e-07 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-07 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-07 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 6e-07 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 1e-06 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 8e-07 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 8e-07 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 3e-04 | |
| 1q8l_A | 84 | Copper-transporting ATPase 1; metal binding protei | 9e-07 | |
| 1osd_A | 72 | MERP, hypothetical protein MERP; mercury resistanc | 1e-06 | |
| 1kvi_A | 79 | Copper-transporting ATPase 1; menkes, Cu-protein, | 1e-06 | |
| 1aw0_A | 72 | Menkes copper-transporting ATPase; copper-binding | 1e-06 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 2e-06 | |
| 2qif_A | 69 | Copper chaperone COPZ; tetranuclear Cu(I) cluster; | 2e-06 | |
| 3cjk_B | 75 | Copper-transporting ATPase 1; HAH1, ATP7B, menkes | 2e-06 | |
| 1y3j_A | 77 | Copper-transporting ATPase 1; ferrodoxin-like fold | 2e-06 | |
| 1cpz_A | 68 | Protein (COPZ); copper chaperone, metal transport, | 2e-06 | |
| 2g9o_A | 90 | Copper-transporting ATPase 1; menkes disease, solu | 3e-06 | |
| 2l3m_A | 71 | Copper-ION-binding protein; structural genomics, c | 4e-06 | |
| 2ldi_A | 71 | Zinc-transporting ATPase; metal homeostasis, metal | 7e-06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 8e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 2ofg_X | 111 | Zinc-transporting ATPase; ferredoxin-like fold, be | 2e-05 | |
| 1jww_A | 80 | Potential copper-transporting ATPase; beta-alpha-b | 3e-05 | |
| 1opz_A | 76 | Potential copper-transporting ATPase; mutation, fo | 4e-05 | |
| 1yjr_A | 75 | Copper-transporting ATPase 1; metallochaperone, pr | 7e-05 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 2e-04 | |
| 2aj0_A | 71 | Probable cadmium-transporting ATPase; ferrodoxin-l | 2e-04 | |
| 2crl_A | 98 | Copper chaperone for superoxide dismutase; SOD1, f | 4e-04 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 5e-04 | |
| 1fvq_A | 72 | Copper-transporting ATPase; APO-CCC2A, hydrolase; | 6e-04 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 7e-04 | |
| 1mwy_A | 73 | ZNTA; open-faced beta-sandwich fold, beta-alpha-be | 8e-04 |
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 491 bits (1267), Expect = e-161
Identities = 195/680 (28%), Positives = 324/680 (47%), Gaps = 59/680 (8%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+ V G+ C+ V IE + SLEGV+EV V + + T + D I I + +
Sbjct: 2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE 61
Query: 70 QARFEANVRAYGGTSYQKKWPS-PYAMACGVLLAISILKY---VYHPLRWFALGAVAIGI 125
+ ++ + + + +L + P F +A+
Sbjct: 62 DLGYGVVDEQAAVSAEVEHLSRMKRKLYVAAFAGVLLLFLAHFISLPYEDFVQLLIALPA 121
Query: 126 -----FPIILKGLAAIRNFKLDINILV-----------LIAVIGTIAMND-YIE-AGIIV 167
I +A+R L+++++ +++ G + + E + +++
Sbjct: 122 IFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLL 181
Query: 168 FLFTIAEWLESRASHKATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGE 225
+ LE+RA + + L+ + + A++ G V EV + ++ V+ GE
Sbjct: 182 AFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGE 241
Query: 226 VIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVA 285
IP+DG+VV+G+ VDE ++GE PV K KG V+ TIN G + + T V + ++A
Sbjct: 242 KIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLA 301
Query: 286 KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV- 344
++ KLVE+A SK IQR DK Y+ P V+ ++ + + + A
Sbjct: 302 QIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP----LLFAFTT 357
Query: 345 ---VLVSACPCALILSTPVVTYCALT----KAATSGLLIKGGDYLQTLAKVRFMAFDKTG 397
VLV ACPCA L+TP ALT K A G+LIK D L+ KV + FDKTG
Sbjct: 358 LIAVLVVACPCAFGLATPT----ALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTG 413
Query: 398 TITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVE 457
T+T+G+ +++ PL+ D LL + E +S HP++ A+V+ IE E
Sbjct: 414 TLTKGKPEVTDLVPLNGD--ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGE--PE 469
Query: 458 DYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMK----GNTIGYIFSGAS 513
+ GEG+ I +GN+++ + G V+ K T +
Sbjct: 470 KVEVIAGEGVVAD----GILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGR 525
Query: 514 PVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLP 573
GI +SD + A AV +LK +GI+ M+TGDN +A +L L++V +E+LP
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--LDLVIAEVLP 583
Query: 574 EDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIR 633
K++ + + + + A +GDGINDAPALA AD+GI++G SGS +A E+G ++L+ +D+R
Sbjct: 584 HQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLR 642
Query: 634 KVPEAIRLARKAHWKVIENI 653
V AI+L+R K + I
Sbjct: 643 DVVAAIQLSR----KTMSKI 658
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 451 bits (1162), Expect = e-147
Identities = 177/565 (31%), Positives = 286/565 (50%), Gaps = 50/565 (8%)
Query: 116 FALGAVAIGIFPIILKGLAAIRNFKLDINILV-----------LIAVIGTIAMND-YIE- 162
AL A+ I +A+R L+++++ +++ G + + E
Sbjct: 39 IALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYET 98
Query: 163 AGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKA--IIAGTGEEVDAGEVKLNTVLA 220
+ +++ + LE+RA + + L+ + + A I G V EV + ++
Sbjct: 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVI 158
Query: 221 VKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAE 280
V+ GE IP+DG+VV+G+ VDE ++GE PV K KG V+ TIN G + + T V
Sbjct: 159 VRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGG 218
Query: 281 DCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFH 340
+ ++A++ KLVE+A SK IQR DK Y+ P V+ ++ + + +
Sbjct: 219 ETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP----LL 274
Query: 341 LALV----VLVSACPCALILSTPVVTYCALT----KAATSGLLIKGGDYLQTLAKVRFMA 392
A VLV ACPCA L+TP ALT K A G+LIK D L+ KV +
Sbjct: 275 FAFTTLIAVLVVACPCAFGLATPT----ALTVGMGKGAELGILIKNADALEVAEKVTAVI 330
Query: 393 FDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPK 452
FDKTGT+T+G+ +++ PL+ D LL + E +S HP++ A+V+ IE
Sbjct: 331 FDKTGTLTKGKPEVTDLVPLNGD--ERELLRLAAIAERRSEHPIAEAIVKKALEHGIE-- 386
Query: 453 PEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMK----GNTIGYI 508
+ E + GEG+ I +GN+++ + G V+ K T +
Sbjct: 387 LGEPEKVEVIAGEGVVAD----GILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIV 442
Query: 509 FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH 568
GI +SD + A AV +LK +GI+ M+TGDN +A +L L++V
Sbjct: 443 ARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--LDLVI 500
Query: 569 SELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
+E+LP K++ + + + + A +GDGINDAPALA AD+GI++G SGS +A E+G ++L+
Sbjct: 501 AEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLI 559
Query: 629 SNDIRKVPEAIRLARKAHWKVIENI 653
+D+R V AI+L+R K + I
Sbjct: 560 RDDLRDVVAAIQLSR----KTMSKI 580
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 443 bits (1143), Expect = e-143
Identities = 168/561 (29%), Positives = 292/561 (52%), Gaps = 48/561 (8%)
Query: 127 PIILKGLAAIRNFKLDINILV--------LIAVIGTIA--------------MNDYIEA- 163
P +G +++ +L++ L+ + +++ + + Y EA
Sbjct: 132 PFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAA 191
Query: 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAII---AGTGEEVDAGEVKLNTVLA 220
+I L + + LE +A + + + +L+ + P+ A G+ EEV V + +L
Sbjct: 192 AVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLR 251
Query: 221 VKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAE 280
V+ GE IP+DG V +G+ VDE +TGE PV+K+ + V TIN G ++ V
Sbjct: 252 VRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGS 311
Query: 281 DCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFH 340
D ++A++ ++V +AQ S++ IQR D S ++ PAVI ++ ++ LG
Sbjct: 312 DTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQPA---LS 368
Query: 341 LALV----VLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKT 396
L+ VL+ ACPCAL L+TP+ + K A SG+LIK + L+ + KV + DKT
Sbjct: 369 YGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKT 428
Query: 397 GTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDV 456
GT+T G ++ +++D + L +++E +S HP++ A+V + + V
Sbjct: 429 GTLTEGHPKLTRI--VTDDFVEDNALALAAALEHQSEHPLANAIVHAAKEKGLSLGS--V 484
Query: 457 EDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVP---SVDGPKMKGNTIGYIFSGAS 513
E ++ G+G+ G++ G + IGN ++ Q G P D + KG ++ ++
Sbjct: 485 EAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGK 544
Query: 514 PVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLP 573
V + + D ++ E + +L+ GI MLTGD++ A LG + V +E++P
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG--IKKVVAEIMP 602
Query: 574 EDKAKIINQFKQEGKT-AMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDI 632
EDK++I+++ K +G AM GDG+NDAPALA ADIGI+MG +G+ +A E+ V L+ D+
Sbjct: 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDL 661
Query: 633 RKVPEAIRLARKAHWKVIENI 653
R + +A RL+ + NI
Sbjct: 662 RGIAKARRLSE----STMSNI 678
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 271 bits (695), Expect = 8e-84
Identities = 93/277 (33%), Positives = 161/277 (58%), Gaps = 7/277 (2%)
Query: 376 IKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHP 435
++ + ++ + FDKTGT+T G F +++ + + + LL +S+E++S HP
Sbjct: 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGF--NHSEDELLQIAASLEARSEHP 58
Query: 436 MSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSV 495
++AA+VE +VE+++ PG+G+ G + G + + + G T SV
Sbjct: 59 IAAAIVEEAEKRGFGL--TEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESV 116
Query: 496 DGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQ 555
+ K +G T+ +I G+ L+D R + EA+++LK++GI+ MLTGDN+ A
Sbjct: 117 EKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKW 176
Query: 556 AQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISG 615
E+LG L+ +E+LP +KA+ + + +Q+ TAM+GDG+NDAPALA AD+GI++G +G
Sbjct: 177 VAEELG--LDDYFAEVLPHEKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIG-AG 233
Query: 616 SALATETGQVILMSNDIRKVPEAIRLARKAHWKVIEN 652
+ +A ET ++L+ ND R V + L+RK + K
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGL 270
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 3e-82
Identities = 79/294 (26%), Positives = 147/294 (50%), Gaps = 35/294 (11%)
Query: 361 VTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNT 420
+ K G++IK + + + ++ + F+KTGT+T G ++++F I +
Sbjct: 1 MALSLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQF------IGDSL 54
Query: 421 LLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGN 480
L + +S+E+ SSHP++ A+V+Y + ++ V+D++ G G+ GKI + I +
Sbjct: 55 SLAYAASVEALSSHPIAKAIVKYAKEQGVKILE--VKDFKEISGIGVRGKISDKIIEVKK 112
Query: 481 RKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540
+ N ++ P+ F +SD R + + +LK+ G+
Sbjct: 113 AE-------------------NNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGL 153
Query: 541 RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKT-AMIGDGINDA 599
+ +L+GD + + ++L + +S L PEDK +II + KQ G MIGDG+NDA
Sbjct: 154 KIIILSGDKEDKVKELSKELN--IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDA 211
Query: 600 PALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENI 653
ALA AD+ ++MG +G ++ +IL+SNDI + I+ + ++ I
Sbjct: 212 AALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRK----RLSNAI 260
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 258 bits (663), Expect = 4e-79
Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 19/290 (6%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K A G+LIK D L+ KV + FDKTGT+T+G+ +++ PL + + LL +
Sbjct: 12 KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--NGDERELLRLAAI 69
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRA 487
E +S HP++ A+V+ IE + E + GEG+ I +GN+++ +
Sbjct: 70 AERRSEHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVAD----GILVGNKRLMEDF 123
Query: 488 GCGTVPSVDGPKMK----GNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTA 543
G V+ K T + GI +SD + A AV +LK +GI+
Sbjct: 124 GVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG 183
Query: 544 MLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALA 603
M+TGDN +A +L L++V +E+LP K++ + + + + A +GDGINDAPALA
Sbjct: 184 MITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALA 241
Query: 604 TADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENI 653
AD+GI++G SGS +A E+G ++L+ +D+R V AI+L+R K + I
Sbjct: 242 QADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSR----KTMSKI 286
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-33
Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 188 MSSLMSIAPQKAIIAGTGEEVD--AGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTL 245
+ L+ + + A++ G+E+ EV + ++ V+ GE IP+DG+VV+G+ VDE +
Sbjct: 3 IKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMI 62
Query: 246 TGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQ 295
+GE PV K KG V+ TIN G + + T V + ++A++ KLVE+A
Sbjct: 63 SGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-31
Identities = 74/347 (21%), Positives = 133/347 (38%), Gaps = 26/347 (7%)
Query: 127 PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATA 186
LK L I ++ A + + D+++ G+I L + + +A +
Sbjct: 111 NHFLKFLGFFVGP---IQFVMEGAAVLAAGLEDWVDFGVICGLLLLNAVVGFVQEFQAGS 167
Query: 187 VMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC--EVDE 242
++ L KA++ GT +E++A EV +L V+ G +IP DG +V +VD+
Sbjct: 168 IVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQ 227
Query: 243 KTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQ 302
LTGES V K KG V+A + G V TA ++ V + A LV A
Sbjct: 228 SALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFT 287
Query: 303 RFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW---FHLALVVLVSACPCALILSTP 359
++ VIF V V L + + P L P
Sbjct: 288 EVLNGIGTILLILVIFTLLIVWVS----SFYRSNPIVQILEFTLAITIIGVPVGL----P 339
Query: 360 VVTYCALTKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED 415
V + A +++ +++LA V + DKTGT+T+ + + + ++
Sbjct: 340 AVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV 399
Query: 416 INLNTLLYWV--SSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQ 460
+ +L +S + K + A ++ + + Y+
Sbjct: 400 DPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRA--KSVLSKYK 444
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-25
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL-- 572
+GI D R + V + K+LG+ MLTGD A + QLG N+ ++E L
Sbjct: 527 LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGL 586
Query: 573 -------------------------PEDKAKIINQFKQEGKT-AMIGDGINDAPALATAD 606
P+ K ++ +Q G AM GDG+NDAP+L AD
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKAD 646
Query: 607 IGISMGISGSALATETGQVILMSNDIRKVPEAIRLARK--------AHWKVIENIAVSIA 658
GI++ S A ++ ++ + + +A++ +R+ +++ +I + I
Sbjct: 647 TGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIF 705
Query: 659 TKAGIIALALGGHP--LVWAAVLADV 682
I L + +V+ A+ ADV
Sbjct: 706 LGLWIAILNRSLNIELVVFIAIFADV 731
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 117 bits (297), Expect = 3e-31
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 180 ASHKATAVMSSLMSIAPQKAIIAGTG--------EEVDAGEVKLNTVLAVKAGEVIPIDG 231
S + ++ L+S+ +A I E+VD V+ ++ V G P+DG
Sbjct: 1 GSFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDG 60
Query: 232 IVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291
V++G VDE +TGE+ PV+K+ GSTV AG+IN NG + + T V D ++++ KLV
Sbjct: 61 RVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLV 120
Query: 292 EEAQ 295
EEAQ
Sbjct: 121 EEAQ 124
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 8e-27
Identities = 67/353 (18%), Positives = 140/353 (39%), Gaps = 40/353 (11%)
Query: 123 IGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASH 182
+++ A I+ + G D+ + I+ L I + +
Sbjct: 66 WNPLSWVMEMAA----------IMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115
Query: 183 KATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC-E 239
A ++LM+ K + G E +A + ++++K G++IP D +++G +
Sbjct: 116 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLK 175
Query: 240 VDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299
VD+ LTGES PV+K G V++G+ G I A K A LV+
Sbjct: 176 VDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VG 234
Query: 300 RIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW---FHLALVVLVSACPCALIL 356
Q+ + + + I+ + + I + +++ LV+L+ P A+
Sbjct: 235 HFQKVLTAIGNF---CICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAM-- 289
Query: 357 STP-VVTYC-AL--TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSE--FQ 410
P V++ A+ + + G + K ++ +A + + DKTGT+T + + + +
Sbjct: 290 --PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE 347
Query: 411 PLSEDINLNTLLYWV---SSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQ 460
+ + + +L + S +E++ + AA+V E +
Sbjct: 348 VFCKGVEKDQVLLFAAMASRVENQD--AIDAAMVGMLAD-----PKEARAGIR 393
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-24
Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 46/210 (21%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL-- 572
VG+ L D R +AE + + +LG+ M+TGD + + +LG N+ S L
Sbjct: 480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 539
Query: 573 --------------------------PEDKAKIINQFKQEGKT-AMIGDGINDAPALATA 605
PE K +I+ + ++ M GDG+NDAPAL A
Sbjct: 540 THKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 599
Query: 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARK--------AHWKVIENIAVSI 657
DIGI++ + A ++L + + A+ +R + V I +
Sbjct: 600 DIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 658
Query: 658 ATKAGIIALALGGHPL-----VWAAVLADV 682
++ + + A+L D
Sbjct: 659 GF---MLIALIWEFDFSAFMVLIIAILNDG 685
|
| >2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 3e-25
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 2 AAAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQ 61
+ +K QKSYFDVLGICC+SEVP+IENILKSL+GVKE SVIVPSRTVIV+HD+LLIS
Sbjct: 8 EKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP 67
Query: 62 HQIVKALNQARFEANVRAYGGTSYQKKW 89
QI KALN+AR EANVR G TS++ KW
Sbjct: 68 FQIAKALNEARLEANVRVNGETSFKNKW 95
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 3e-18
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQS----------------------- 551
VG+ + D R ++ + GIR M+TGDN+
Sbjct: 595 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 654
Query: 552 -----AAMQAQEQLGNALNV-VHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALAT 604
+ EQ + + P K+KI+ + + TAM GDG+NDAPAL
Sbjct: 655 TGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 714
Query: 605 ADIGISMGISGSALATETGQVILM 628
A+IGI+MG SG+A+A +++L
Sbjct: 715 AEIGIAMG-SGTAVAKTASEMVLA 737
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-10
Identities = 68/330 (20%), Positives = 124/330 (37%), Gaps = 79/330 (23%)
Query: 136 IRNFKLDINILVLI--AVI---------GTIAMNDYIEAGIIVFLF----TIAEWLESRA 180
I F+ D+ + +L+ A I G + ++E +I+ + + W E A
Sbjct: 55 IEQFE-DLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNA 113
Query: 181 SHKATAVMSSLMSIAPQKAII----AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDG 236
A + +L P+ + + + + A ++ ++ V G+ +P D ++
Sbjct: 114 -ENA---IEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSI 169
Query: 237 KC---EVDEKTLTGESYPVSKQ-------------KGSTVWAGTINLNGYISVETTAVAE 280
K VD+ LTGES V K K + +++GT G A+
Sbjct: 170 KSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAG------KALG- 222
Query: 281 DCVVA--------KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALG- 331
V K+ + + K+ +Q+ +D+F + + + I V +I I
Sbjct: 223 -IVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN 281
Query: 332 -VSNHKQWFHLALVVL-------VSACPCALILSTPVVTYC-AL--TKAATSGLLIKGGD 380
+ W A+ V+A P L V+T C AL + A +++
Sbjct: 282 DPVHGGSWIRGAIYYFKIAVALAVAAIPEGL---PAVITTCLALGTRRMAKKNAIVR--- 335
Query: 381 YLQ---TLAKVRFMAFDKTGTITRGEFVMS 407
L TL + DKTGT+T + MS
Sbjct: 336 SLPSVETLGCTSVICSDKTGTLTTNQ--MS 363
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 4e-18
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 57/175 (32%)
Query: 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD----------------- 548
F VG+ + D R +AV + +S GI+ M+TGD
Sbjct: 587 DLCF-----VGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISE 641
Query: 549 ----------NQSAAMQAQEQLGNALNVVH-SEL-------L----------------PE 574
+ + VVH S+L L P+
Sbjct: 642 GNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQ 701
Query: 575 DKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
K I+ +++G A+ GDG+ND+PAL ADIG++MGISGS ++ + +IL+
Sbjct: 702 QKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILL 756
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 6e-15
Identities = 68/319 (21%), Positives = 123/319 (38%), Gaps = 70/319 (21%)
Query: 124 GIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGII--VFLFT--IAEWLESR 179
G F I+L AI F + + A A ++ ++ V + T + + E++
Sbjct: 103 GGFSILLWI-GAILCF---LAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAK 158
Query: 180 ASHKATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237
+S +M S ++ PQ+A++ G ++A V ++ VK G+ IP D ++
Sbjct: 159 SS----RIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAH 214
Query: 238 -CEVDEKTLTGESYPVSKQKGST----------VWAGTINLNGYISVETTAVAEDCVVA- 285
C+VD +LTGES P ++ + + T + G TA VV
Sbjct: 215 GCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEG------TARG--VVVYT 266
Query: 286 -------KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW 338
++A L + ++ I ++ F T +F+ ++ + W
Sbjct: 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL----SLILGYSW 322
Query: 339 FHLALVVL---VSACPCALILSTPVVTYC-ALT-------KAATSGLLIKGGDYLQ---T 384
+ ++ V+ P L+ VT C LT L+K L+ T
Sbjct: 323 LEAVIFLIGIIVANVPEGLL---ATVTVCLTLTAKRMARKNC-----LVKN---LEAVET 371
Query: 385 LAKVRFMAFDKTGTITRGE 403
L + DKTGT+T+
Sbjct: 372 LGSTSTICSDKTGTLTQNR 390
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-17
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 57/175 (32%)
Query: 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQ--------------- 550
G F G+ + D R +AV + ++ GIR M+TGD+
Sbjct: 592 GLSF-----AGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISE 646
Query: 551 ------------SAAMQAQEQLGNALNVVH-SEL-------L----------------PE 574
+ + V++ +L L P+
Sbjct: 647 GSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQ 706
Query: 575 DKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
K I+ ++ G A+ GDG+ND+PAL ADIG++MGI+GS A +IL+
Sbjct: 707 QKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILL 761
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 3e-15
Identities = 61/335 (18%), Positives = 122/335 (36%), Gaps = 77/335 (22%)
Query: 105 ILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVI-GTIAMNDYIEA 163
+ + L+ A AI + I + A + L L + + +
Sbjct: 102 FARQLAGGLQCLMWVAAAICL---IAFAIQASEGDLTTDDNLYLALALIAVVVVT----- 153
Query: 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAII--AGTGEEVDAGEVKLNTVLAV 221
G + + E +++ +++S ++ PQ+A + G +++A ++ + ++ +
Sbjct: 154 GCFGY------YQEFKST----NIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEM 203
Query: 222 KAGEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGST----------VWAGTINLNGY 270
K G+ +P D ++ + +VD +LTGES P ++ T + T+ L G
Sbjct: 204 KGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEG- 262
Query: 271 ISVETTAVAEDCVVA--------KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISAC 322
TA VV ++A L +N K+ I ++ F I
Sbjct: 263 -----TAQG--LVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILF--G 313
Query: 323 VAVIPIALGVSNHKQWFHLALVVL---VSACPCALILSTPVVTYC-ALT-------KAAT 371
+ + + + + V+ P L+ VT C +LT
Sbjct: 314 ATF--FIVAMCIGYTFLRAMVFFMAIVVAYVPEGLL---ATVTVCLSLTAKRLASKNC-- 366
Query: 372 SGLLIKGGDYLQ---TLAKVRFMAFDKTGTITRGE 403
++K L+ TL + DKTGT+T+
Sbjct: 367 ---VVKN---LEAVETLGSTSVICSDKTGTLTQNR 395
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Length = 185 | Back alignment and structure |
|---|
Score = 74.7 bits (183), Expect = 2e-15
Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 39/218 (17%)
Query: 393 FDKTG--TITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIE 450
F G + + + + S I+ + +L V + ES S HP+ A+ +Y +
Sbjct: 2 FTMHGTPVVNQVKVLTE-----SNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDT 56
Query: 451 PKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFS 510
D+Q PG GI K+ E + S+ +
Sbjct: 57 ETLGTCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDA--------SN 108
Query: 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE 570
S + DA + A A +G R M+ N L +
Sbjct: 109 EQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIR---------------NGLVI---- 149
Query: 571 LLPEDKAKIINQFKQEGKTAMIGDGINDAPA--LATAD 606
D + + +++G+TA++ ++D +A AD
Sbjct: 150 --NNDVNDFMTEHERKGRTAVLV-AVDDELCGLIAIAD 184
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Length = 165 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 9e-13
Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 4/147 (2%)
Query: 413 SEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIG 472
+ L +L V + E+ S HP+ A+ +Y + D+Q PG GI K+
Sbjct: 17 VATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVS 76
Query: 473 GEEIYIGN--RKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAE 530
E + + R ++ A + + + + + ++
Sbjct: 77 NVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSD 136
Query: 531 AVNQLKSLGIRTAMLTG-DNQSAAMQA 556
A+ + G +TA+L D M A
Sbjct: 137 AMTDHEMKG-QTAILVAIDGVLCGMIA 162
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 7e-09
Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 20/103 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------- 572
GA E V+ LK + +G A ++ L N L V + L
Sbjct: 79 GALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMM 138
Query: 573 -PEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGI 609
K +++ ++ T ++GDG ND A I I
Sbjct: 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKI 181
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K+ FD+ G+ C++ IE L +EGV V TV V ++ S + +A++
Sbjct: 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 133
Query: 70 QARFEANV 77
+ ++ +
Sbjct: 134 KLGYKLKL 141
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ C++ IE LK + GV + +V + + TV V++D I + +
Sbjct: 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65
Query: 70 QARFEANV 77
+ +
Sbjct: 66 KLGYHVVT 73
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 5e-08
Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 23/106 (21%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPED----------- 575
G E V + I +++G E + + + ++
Sbjct: 81 GFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSC 140
Query: 576 -----------KAKIINQFKQE-GKTAMIGDGINDAPALATADIGI 609
K +I++ + MIGD + D A +D+
Sbjct: 141 KGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 186
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 20/103 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------- 572
G + +K+ G +TA+++G + + + N + + + L
Sbjct: 183 GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIM 242
Query: 573 -PEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGI 609
+K + + GDG ND P L A GI
Sbjct: 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 1e-07
Identities = 85/618 (13%), Positives = 173/618 (27%), Gaps = 184/618 (29%)
Query: 10 QKSYFDVLGICCSS-----EVPLIENILKSLEGVKEVSVIVPSRTVI----VLHDALLIS 60
Q Y D+L + + + ++++ KS+ +E+ I+ S+ + L LL
Sbjct: 15 QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK 74
Query: 61 QHQIVKALNQARFEANVRAYG--GTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFAL 118
Q ++V+ + N Y + + + P ++ Y+ R +
Sbjct: 75 QEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQP---------SMMTRMYIEQRDRLYND 122
Query: 119 GAVAIGIFPIILKGLAAIRN--FKLDINILVLI--------AVIGTIAMNDY-IEAGIIV 167
V L+ +R +L VLI + Y ++
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ---CK 179
Query: 168 FLFTIAEWLESRASHKATAVMSSLMSI--------APQKAIIAGTGEEVDAGEVKLNTVL 219
F I WL + + V+ L + + + + + + +L +L
Sbjct: 180 MDFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 220 AVKAGE---VIPIDGI-------VVDGKCEVDEKTL--TGESYPVSKQKGSTVWAGTIN- 266
K E ++ + + + C K L T +T +++
Sbjct: 239 KSKPYENCLLV-LLNVQNAKAWNAFNLSC----KILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 267 -LNGYISVETTAVAEDCVVAKMAKLVEEA---------------QNSKSRIQRF----VD 306
E ++ + + L E ++ + + D
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 307 KFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366
K + I + + V L + +++ F L V + A I P + +
Sbjct: 354 KLTT-------IIESSLNV----LEPAEYRKMFD-RLSVFPPS---AHI---PTILLSLI 395
Query: 367 -------------TKAATSGLLIKGGD---------YLQTLAKVRFMA------------ 392
K L+ K YL+ K+
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 393 ---FDKTGTITRGE------FV---MSEFQPLSEDINLNTLLY----WVSSIESKSSHPM 436
FD I + + + E + L +++ + +E K H
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH-PERMTLFRMVFLDFRF---LEQKIRHDS 511
Query: 437 SAA------------LVEYGRSLS-IEPKPED-VEDYQNF---PGEGIYG-------KIG 472
+A L Y + +PK E V +F E + +I
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA 571
Query: 473 ----GEEIYIGNRKIAQR 486
E I+ K QR
Sbjct: 572 LMAEDEAIFEEAHKQVQR 589
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 22/108 (20%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG--------NALNVVHSELL------ 572
G E V++L+ ++ +++G +S +L N L +
Sbjct: 90 GIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDET 149
Query: 573 -----PEDKAKIINQFKQE---GKTAMIGDGINDAPALATADIGISMG 612
K K+I K++ K MIGDG D A AD I G
Sbjct: 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 197
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-07
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 20/103 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------- 572
GA E + +LK+ G A+++G A + +E+LG N L V +L
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL 139
Query: 573 -PEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGI 609
K +I+ + + T +GDG ND A + I
Sbjct: 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 20/103 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------- 572
E V L + G + A+ +G + +EQL N L +V +L
Sbjct: 182 ELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVV 241
Query: 573 -PEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGI 609
+ KA I+ Q+ T +GDG ND +A A +G+
Sbjct: 242 SAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
QK + + G+ C+S V IE L+ GV V V + + + +D +I +I + +
Sbjct: 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ 63
Query: 70 QARFEANVRAYGGTSYQK 87
FEA V S
Sbjct: 64 DLGFEAAVMEDYAGSDGN 81
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 17/75 (22%), Positives = 31/75 (41%)
Query: 3 AAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQH 62
+ G+ C+S V IE+ L G+ SV + + +V D +I
Sbjct: 73 EDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPR 132
Query: 63 QIVKALNQARFEANV 77
I+K + + F A++
Sbjct: 133 DIIKIIEEIGFHASL 147
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 8e-07
Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 14/140 (10%)
Query: 396 TGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLS-IEPKPE 454
+G R SEF P + ++ TL P ++V + + +
Sbjct: 14 SGHGGRHNRQASEFIPA-QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDV 72
Query: 455 DVEDYQNFPGEGIYG----KIGGEEIYIGNRKIAQR---AGCGTVPS-----VDGPKMKG 502
P I I G+ +R A G P+ VD +G
Sbjct: 73 QSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQG 132
Query: 503 NTIGYIFSGASPVGIFCLSD 522
T + G+ +G+ L D
Sbjct: 133 ATPLVVVEGSRVLGVIALKD 152
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 8e-07
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 2 AAAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQ 61
+ + + G+ C+S V IE ++ LEGV+++SV + T VL++ +IS
Sbjct: 114 RNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISP 173
Query: 62 HQIVKALNQARFEANV 77
++ A+ FEA+V
Sbjct: 174 EELRAAIEDMGFEASV 189
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 2 AAAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQ 61
Q + G+ C S V IE + L GV+ + V + ++T V +D S
Sbjct: 12 LGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSP 71
Query: 62 HQI---VKALNQARFEANV 77
+ ++AL F+ ++
Sbjct: 72 VALQRAIEALPPGNFKVSL 90
|
| >1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 9e-07
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 2 AAAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQ 61
+ + V G+ C S IE + L+GV+ + V + ++ +++ LIS
Sbjct: 1 GSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV 60
Query: 62 HQIVKALNQARFEANVR 78
++ K + F A V+
Sbjct: 61 EEMKKQIEAMGFPAFVK 77
|
| >1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-06
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q V G+ CS+ ++ + +EGV +V V +R +V D S ++ KA
Sbjct: 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62
Query: 70 QARFEANVR 78
A + ++V+
Sbjct: 63 DAGYPSSVK 71
|
| >1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-06
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
V G+ C+S V IE + + GV + V + + +++D L + + +A++
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67
Query: 70 QARFEANVRA 79
F+A +
Sbjct: 68 DMGFDAVIHN 77
|
| >1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-06
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q++ ++ G+ C+S V IE ++ GVK + V + + V +D LL S + A+
Sbjct: 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62
Query: 70 QARFEANV 77
F+A +
Sbjct: 63 DMGFDATL 70
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-06
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K V G+ C++ +E L ++ GV + SV + V+ D L+ + I + +
Sbjct: 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE 61
Query: 70 QARFEANV 77
A FEA +
Sbjct: 62 DAGFEAEI 69
|
| >2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-06
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ C V +E + L+GV V V + + V V DA +S I A+
Sbjct: 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61
Query: 70 QARFEA 75
++
Sbjct: 62 DQGYDV 67
|
| >3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-06
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
V G+ C+S V IE + + GV + V + + +++D L + + +A++
Sbjct: 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 61
Query: 70 QARFEANVR 78
F+A +
Sbjct: 62 DMGFDAVIH 70
|
| >1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-06
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
K Y V G+ C+S V IE L+ EG+ + V + + V ++ +I I + +
Sbjct: 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR 62
Query: 70 QARFEANV 77
+ F A V
Sbjct: 63 ELGFGATV 70
|
| >1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-06
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
F V G+ C+ V IE + + GVK+V V + +V D + +I +A+N+ +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63
Query: 74 EANV 77
+A V
Sbjct: 64 QAEV 67
|
| >2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-06
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
F + G+ C S V IE+ L +L+ V + V + +R+ IV+++A ++ + KA+
Sbjct: 7 FIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSP 66
Query: 74 EA 75
Sbjct: 67 GL 68
|
| >2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-06
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ C V IE+ +K L GV++V V + TV V D+ +++ IV +
Sbjct: 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE 64
Query: 70 QARFEA 75
++
Sbjct: 65 DQGYDV 70
|
| >2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-06
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+ V G+ C++ IE L+ L+GV E SV V + + V +D +S+ I + +
Sbjct: 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA 62
Query: 70 QARFEA 75
+
Sbjct: 63 ALGYTL 68
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 8e-06
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 20/103 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------- 572
GA + L+ LG +++G + E+L N L +V L
Sbjct: 260 GARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPII 319
Query: 573 -PEDKAKIINQFKQE-----GKTAMIGDGINDAPALATADIGI 609
KA + +F Q +T +GDG ND LA A +GI
Sbjct: 320 DRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGI 362
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHSELL-------P 573
GA E V+ L+ + +L+ + QLG + L + S+ +
Sbjct: 73 GAVEFVDWLRE-RFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQK 131
Query: 574 EDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGI 609
+ K + + FK + GD ND L+ A GI
Sbjct: 132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-05
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K+ FD+ G+ C++ IE L +EGV V TV V ++ S + +A++
Sbjct: 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 62
Query: 70 QARFEANVRA 79
+ ++ ++
Sbjct: 63 KLGYKLKLKG 72
|
| >1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-05
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ C++ IE LK + GV + +V + + TV V++D I + +
Sbjct: 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65
Query: 70 QARFEANVRA 79
+ + +
Sbjct: 66 KLGYHVVIEG 75
|
| >1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-05
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V G+ C+S V IE+ L G+ SV + + + +D +I I+ + F
Sbjct: 8 LVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGF 67
Query: 74 EANV 77
E ++
Sbjct: 68 EPSL 71
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 19/98 (19%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNVVHS---ELLPED-- 575
G E V LK+ G + +G + + L A+ + + D
Sbjct: 86 GIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNS 145
Query: 576 ---KAKIINQFKQE-----GKTAMIGDGINDAPALATA 605
++ F + G+ IGDG D
Sbjct: 146 NGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKG 183
|
| >2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 2e-04
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K+ + V G+ C++ E +K +EGV E V + + V +A ++ +
Sbjct: 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVE 55
Query: 70 QARFEANVRA 79
QA +++
Sbjct: 56 QAGAFEHLKI 65
|
| >2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 4e-04
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
F V + C S V + L+ + GV++V V + + V+V ++ L
Sbjct: 23 FAV-QMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTL---PSQEVQALLEGTGR 78
Query: 74 EANVRAYGGTSYQK 87
+A ++ G Q
Sbjct: 79 QAVLKGMGSGQLQN 92
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 5e-04
Identities = 27/202 (13%), Positives = 52/202 (25%), Gaps = 8/202 (3%)
Query: 746 CCQSSAEFHTHRHGCKSNHFHPSDNQQLCCSDSKAQNRCEPEDYSSHGCDSRSNDSGSRS 805
C S E + C+ + F SD C S+ +C+ E D + +
Sbjct: 201 CKDKSDEENCAVATCRPDEFQCSDGN--CIHGSR---QCDREYDCKDMSDEVGCVNVTLC 255
Query: 806 PNLCGNNQCCAGSDHGAEEDKLCDHERFNKDDHDIEAQNIHNCSGYHNSNFSKNNTWPNC 865
G N+ S DK+C+ R +D D + N+ +
Sbjct: 256 ---EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLK 312
Query: 866 FGRKGNCGEDHVNHSVSEEICLEVTNHEHQHSHHCSEKHEKNHVHVTDSGSHSCGHHCPE 925
G + C + + ++ S C + +
Sbjct: 313 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 372
Query: 926 PIPVIKKCYTDHSEGRHNAAYH 947
+ I + +
Sbjct: 373 AVGSIAYLFFTNRHEVRKMTLD 394
|
| >1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72 | Back alignment and structure |
|---|
Score = 38.4 bits (90), Expect = 6e-04
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ CS+ I L++L+GV + + + + V +D ++ I + +
Sbjct: 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDN-EVTADSIKEIIE 60
Query: 70 QARFEANV 77
F+ +
Sbjct: 61 DCGFDCEI 68
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)
Query: 531 AVNQLKSLGIRTAMLTG-DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGK- 588
+ + GI +LTG + +A++ L V + DK + E
Sbjct: 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-----LKVDYLFQGVVDKLSAAEELCNELGI 93
Query: 589 ----TAMIGDGINDAPALATADIGI 609
A IGD +NDA L I
Sbjct: 94 NLEQVAYIGDDLNDAKLLKRVGIAG 118
|
| >1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 8e-04
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+ + V G+ C++ +EN ++ L GV +V V+ + ++V D + + Q+ AL
Sbjct: 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRA--QVESALQ 60
Query: 70 QARFEA 75
+A +
Sbjct: 61 KAGYSL 66
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1007 | ||||
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 9e-23 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-21 | |
| d1p6ta2 | 79 | d.58.17.1 (A:73-151) Potential copper-translocatin | 2e-11 | |
| d1osda_ | 72 | d.58.17.1 (A:) Mercuric ion binding protein MerP { | 6e-11 | |
| d2aw0a_ | 72 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 9e-11 | |
| d1cpza_ | 68 | d.58.17.1 (A:) Copper chaperone {Enterococcus hira | 5e-10 | |
| d1kvja_ | 79 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 5e-10 | |
| d2qifa1 | 69 | d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt | 2e-09 | |
| d1p6ta1 | 72 | d.58.17.1 (A:1-72) Potential copper-translocating | 6e-09 | |
| d1mwza_ | 73 | d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, | 2e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-08 | |
| d2ggpb1 | 72 | d.58.17.1 (B:1-72) Copper transporter domain ccc2a | 9e-08 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 9e-08 | |
| d1q8la_ | 84 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 1e-07 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-07 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 8e-07 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-06 | |
| d1sb6a_ | 64 | d.58.17.1 (A:) Copper chaperone {Synechocystis sp. | 5e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-05 | |
| d1qupa2 | 72 | d.58.17.1 (A:2-73) Copper chaperone for superoxide | 1e-04 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-04 | |
| d1cc8a_ | 72 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 0.003 | |
| d1ofwa_ | 293 | a.138.1.1 (A:) Nine-heme cytochrome c {Desulfovibr | 0.003 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.004 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 92.9 bits (230), Expect = 9e-23
Identities = 49/137 (35%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563
+ + + D + A AV +LK +GI+ M+TGDN +A +L
Sbjct: 2 KVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL- 60
Query: 564 LNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETG 623
++V +E+LP K++ + + + + A +GDGINDAPALA AD+GI++G SGS +A E+G
Sbjct: 61 -DLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESG 118
Query: 624 QVILMSNDIRKVPEAIR 640
++L+ +D+R V AI+
Sbjct: 119 DIVLIRDDLRDVVAAIQ 135
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 90.2 bits (223), Expect = 2e-21
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------ 561
I S + D R ++ + GIR M+TGDN+ A+ ++G
Sbjct: 5 ICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 64
Query: 562 -----------------------NALNVVHSELLPEDKAKIINQF-KQEGKTAMIGDGIN 597
+ + P K+KI+ + TAM GDG+N
Sbjct: 65 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN 124
Query: 598 DAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640
DAPAL A+IGI+MG SG+A+A +++L ++ + A+
Sbjct: 125 DAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVE 166
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 58.7 bits (142), Expect = 2e-11
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+K+ FD+ G+ C++ IE L +EGV V TV V ++ S + +A++
Sbjct: 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61
Query: 70 QARFEANVRA 79
+ ++ ++
Sbjct: 62 KLGYKLKLKG 71
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Score = 56.7 bits (137), Expect = 6e-11
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q V G+ CS+ ++ + +EGV +V V +R +V D S ++ KA
Sbjct: 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62
Query: 70 QARFEANVR 78
A + ++V+
Sbjct: 63 DAGYPSSVK 71
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (136), Expect = 9e-11
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q++ ++ G+ C+S V IE ++ GVK + V + + V +D LL S + A+
Sbjct: 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62
Query: 70 QARFEANV 77
F+A +
Sbjct: 63 DMGFDATL 70
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Score = 54.4 bits (131), Expect = 5e-10
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
F V G+ C+ V IE + + GVK+V V + +V D + +I +A+N+ +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63
Query: 74 EANV 77
+A V
Sbjct: 64 QAEV 67
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (131), Expect = 5e-10
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V G+ C+S V IE + + GV + V + + +++D L + + +A++ F
Sbjct: 12 ISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGF 71
Query: 74 EANVR 78
+A +
Sbjct: 72 DAVIH 76
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Score = 52.5 bits (126), Expect = 2e-09
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ C V +E + L+GV V V + + V V DA +S I A+
Sbjct: 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61
Query: 70 QARFEA 75
++
Sbjct: 62 DQGYDV 67
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 51.3 bits (123), Expect = 6e-09
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V G+ C++ IE LK + GV + +V + + TV V++D I + + + +
Sbjct: 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY 69
Query: 74 EA 75
Sbjct: 70 HV 71
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 49.8 bits (119), Expect = 2e-08
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
+ + V G+ C++ +EN ++ L GV +V V+ + ++V D + + Q+ AL
Sbjct: 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRA--QVESALQ 60
Query: 70 QARFEA 75
+A +
Sbjct: 61 KAGYSL 66
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.0 bits (126), Expect = 3e-08
Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 22/105 (20%)
Query: 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPED-------------- 575
E V++L+ ++ +++G +S +L V + L
Sbjct: 89 ELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPT 148
Query: 576 --------KAKIINQFKQEGKTAMIGDGINDAPALATADIGISMG 612
K++ + K MIGDG D A AD I G
Sbjct: 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.8 bits (114), Expect = 9e-08
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
++ V G+ CS+ I L++L+GV + + + + V +D ++ I + +
Sbjct: 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDN-EVTADSIKEIIE 60
Query: 70 QARFEANV 77
F+ +
Sbjct: 61 DCGFDCEI 68
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 53.3 bits (127), Expect = 9e-08
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 40/137 (29%)
Query: 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--------------------- 563
+N LK G + TG + + E LG
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY 276
Query: 564 ---------------LNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATAD- 606
+ + + ++GD + D +
Sbjct: 277 PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGA 336
Query: 607 --IGISMGISGSALATE 621
IG G+ G A E
Sbjct: 337 TFIGTLTGLKGKDAAGE 353
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 1e-07
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1 MAAAQERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLIS 60
MA A E + V G+ C S IE + L+GV+ + V + ++ +++ LIS
Sbjct: 3 MAQAGEVVLK---MKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLIS 59
Query: 61 QHQIVKALNQARFEANVR 78
++ K + F A V+
Sbjct: 60 VEEMKKQIEAMGFPAFVK 77
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.5 bits (115), Expect = 2e-07
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 16/102 (15%)
Query: 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---CEVDEKTLTGESYPVSKQKGST--- 259
+ + A ++ ++ V G+ +P D ++ K VD+ LTGES V K
Sbjct: 14 QRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDP 73
Query: 260 ----------VWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291
+++GT G + K+ +
Sbjct: 74 RAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.7 bits (110), Expect = 8e-07
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Query: 415 DINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGE 474
+ + LL + E +S HP++ A+V+ IE E + GEG + +
Sbjct: 9 NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEP--EKVEVIAGEG----VVAD 62
Query: 475 EIYIGNRKIAQRAGCGTVPSVDGP----KMKGNTIGYIFSGASPVGIFCLS 521
I +GN+++ + G V+ + + T + GI +S
Sbjct: 63 GILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVS 113
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 48.4 bits (114), Expect = 1e-06
Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 32/154 (20%)
Query: 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG----------------------N 562
R G E V + I +++G E + +
Sbjct: 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPH 136
Query: 563 ALNVVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATE 621
+ S K +I++ + + MIGD + D A +D+ + + +
Sbjct: 137 SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQ 196
Query: 622 TGQVILMSN--DIRKVPEAIRLARKAHWKVIENI 653
+ + +IRK E ++ +V E +
Sbjct: 197 NLNHLPYQDFYEIRKEIENVK-------EVQEWL 223
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Score = 39.9 bits (93), Expect = 5e-05
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
V I C + + +++ + V V + S+ V + + + Q+ A+ A
Sbjct: 5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIASAGH 61
Query: 74 EA 75
E
Sbjct: 62 EV 63
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.3 bits (101), Expect = 5e-05
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 590 AMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARK 644
GD ND L+ A GI + + E Q + E ++ + +
Sbjct: 149 IAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKASSR 202
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (92), Expect = 1e-04
Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 14 FDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF 73
+ + + C + V I+ LK++ G+ ++ + + + V + I+ L
Sbjct: 10 YAI-PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSV---APSTIINTLRNCGK 65
Query: 74 EANVR 78
+A +R
Sbjct: 66 DAIIR 70
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 42.0 bits (98), Expect = 1e-04
Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 13/150 (8%)
Query: 507 YIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNV 566
+ + + F + D + L I+ A+L+G + + LG L
Sbjct: 22 HYDANGEAIKSFHVRDGL------GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF 75
Query: 567 VHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQV 625
+ ++ Q +TA IGD D PA A ++
Sbjct: 76 LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDH 134
Query: 626 ILMSND----IRKVPEAIRLARKAHWKVIE 651
+L ++ R++ + I L + V +
Sbjct: 135 VLSTHGGKGAFREMSDMI-LQAQGKSSVFD 163
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 35.1 bits (81), Expect = 0.003
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 4 AQERKYQKSYFDVLGICCSSEVPLIENILKSLE-GVKEVSVIVPSRTVIVLHDALLISQH 62
A+ + YQ F+V + CS + +L LE V ++ + + + V V +
Sbjct: 1 AEIKHYQ---FNV-VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYD 53
Query: 63 QIVKALNQARFEAN 76
I++ + + E
Sbjct: 54 FILEKIKKTGKEVR 67
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 37.5 bits (85), Expect = 0.004
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 590 AMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640
+GDG ND A + I+ + E + + D+R++ + I+
Sbjct: 162 VAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYIK 210
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1007 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.89 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.69 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.42 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.37 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.93 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.92 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.9 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.86 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.85 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 98.83 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 98.81 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 98.8 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 98.8 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 98.79 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.79 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 98.76 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 98.75 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.75 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 98.7 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 98.68 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.66 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.58 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.55 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.54 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 98.53 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.51 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.5 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.48 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.45 | |
| d1qupa2 | 72 | Copper chaperone for superoxide dismutase, N-termi | 98.27 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.2 | |
| d1sb6a_ | 64 | Copper chaperone {Synechocystis sp. pcc 6803, Scat | 98.15 | |
| d1cc8a_ | 72 | ATX1 metallochaperone protein (ATOX1) {Baker's yea | 98.15 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.13 | |
| d1fe0a_ | 66 | ATX1 metallochaperone protein (ATOX1) {Human (Homo | 98.09 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.73 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.67 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.63 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.54 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.4 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.37 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.36 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.26 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.14 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.98 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.95 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.46 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.29 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.1 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.09 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.05 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.96 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.96 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.86 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.84 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.66 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.63 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.35 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.83 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.78 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.47 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.21 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.14 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.29 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.04 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.74 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=6e-23 Score=196.47 Aligned_cols=124 Identities=32% Similarity=0.517 Sum_probs=117.7
Q ss_pred EEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC-----------------------------EEE
Q ss_conf 994274311199999999978991999918999999999999199965-----------------------------198
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-----------------------------VVH 568 (1007)
Q Consensus 518 i~l~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~-----------------------------~v~ 568 (1007)
+.+-||+|++++++|+.||++||+++|+|||+..+|..+|+++||..+ .+|
T Consensus 15 ~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 94 (168)
T d1wpga2 15 TNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCF 94 (168)
T ss_dssp CCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEE
T ss_pred EEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87348896539999999998849899989999799999999849988764111000346300001278876655322300
Q ss_pred ECCCHHHHHHHHHHHHHCC-EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHHH
Q ss_conf 3169867999999975389-0999919946999876199319928999687885049999169936199999999
Q 001837 569 SELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 569 a~~~Pe~K~~iI~~lq~~g-~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~g 642 (1007)
+|++|++|..+++.||+.| .|+|+|||.||++||++|||||+++ +++++++++||+++++++|..|+.+|++|
T Consensus 95 ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 95 ARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp ESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 000114788899998740454047706778889998598888865-51199998489999159989999999749
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=3.7e-22 Score=190.17 Aligned_cols=131 Identities=37% Similarity=0.600 Sum_probs=123.8
Q ss_pred EEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHC
Q ss_conf 99879979999994274311199999999978991999918999999999999199965198316986799999997538
Q 001837 507 YIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE 586 (1007)
Q Consensus 507 ~va~d~~~lGli~l~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~ 586 (1007)
++..|.+..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||+ .+|++++|++|..+++.+|..
T Consensus 5 ~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~~p~~k~~~v~~~q~~ 82 (135)
T d2b8ea1 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK 82 (135)
T ss_dssp EEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCHHHHHHHHHHHTTT
T ss_pred EEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHHCC
T ss_conf 999989147997368899811999999999859979997586335556777654222--101211026799999999859
Q ss_pred CEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 909999199469998761993199289996878850499991699361999999
Q 001837 587 GKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 587 g~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
+.|+|+|||.||+|||++|||||+++ ++++.++++||+++++++|..|+.+|+
T Consensus 83 ~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 83 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred CEEEEEECCCCCHHHHHHCCEEEECC-CCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf 97899967877578897478624537-658789984999997899889999859
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.69 E-value=2.7e-17 Score=151.35 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=85.2
Q ss_pred CEEEECCC----EEEECCCCCCCCEEEEECCCCCCCCEEEEECE---EEEECCCCCCCCEEEEECC-------------C
Q ss_conf 16992199----89618885559399982897225418999320---3332355889870168248-------------9
Q 001837 198 KAIIAGTG----EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---CEVDEKTLTGESYPVSKQK-------------G 257 (1007)
Q Consensus 198 ~v~v~rdg----~~V~~~dLv~GDII~I~~Ge~IPaDgiIl~G~---~~VDES~LTGES~pv~K~~-------------g 257 (1007)
.++|+|+| ++|++.+|+|||||+|++|++||||++|++++ +.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred CEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 26999999845999869998899899999999995156999961262689872000346898741366226543443333
Q ss_pred CEEEECEEEEEEEEEEEEEEEECCEEEEHHHHHH
Q ss_conf 8243100884310999999970650770258779
Q 001837 258 STVWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291 (1007)
Q Consensus 258 ~~V~aGT~v~~G~~~~~V~~tG~~T~~~ki~~lv 291 (1007)
+++|+||.+.+|.++++|++||.+|++|+|.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 4477416898456999999996003889999759
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.42 E-value=4.5e-14 Score=125.60 Aligned_cols=125 Identities=16% Similarity=0.182 Sum_probs=106.4
Q ss_pred EEEEEEECCCC--CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--------------------------
Q ss_conf 99999942743--11199999999978991999918999999999999199965--------------------------
Q 001837 514 PVGIFCLSDAC--RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------------------- 565 (1007)
Q Consensus 514 ~lGli~l~D~l--R~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~-------------------------- 565 (1007)
..|++..++++ +++++++++.|+++|++++|+|||+..++..+++++|+...
T Consensus 204 ~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~ 283 (380)
T d1qyia_ 204 KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (380)
T ss_dssp CCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCC
T ss_conf 54230135653343639999999998799599988997999999999819953478505874413331122033110236
Q ss_pred ----------EEEECCCHHHHHHHHHHHHHCC-EEEEECCCCCCHHHHHHCC---EEEEECCCCCHHHHH----HCCEEE
Q ss_conf ----------1983169867999999975389-0999919946999876199---319928999687885----049999
Q 001837 566 ----------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATAD---IGISMGISGSALATE----TGQVIL 627 (1007)
Q Consensus 566 ----------~v~a~~~Pe~K~~iI~~lq~~g-~VamVGDG~ND~~aL~~Ad---VGIa~g~~g~~~a~~----~ADivl 627 (1007)
..+.+.+|++|..+++.++..+ .|+|||||.||++|++.|+ |||+||..+++..++ .||+++
T Consensus 284 KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii 363 (380)
T d1qyia_ 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363 (380)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEE
T ss_conf 99869999999980887788999999738998869998899899999998799889994588886437789767999998
Q ss_pred ECCCCCHHHHHHH
Q ss_conf 1699361999999
Q 001837 628 MSNDIRKVPEAIR 640 (1007)
Q Consensus 628 ~~~~l~~I~~~I~ 640 (1007)
+++..+..++.
T Consensus 364 --~~~~el~~il~ 374 (380)
T d1qyia_ 364 --NHLGELRGVLD 374 (380)
T ss_dssp --SSGGGHHHHHS
T ss_pred --CCHHHHHHHHH
T ss_conf --89999999999
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.37 E-value=8e-13 Score=115.65 Aligned_cols=225 Identities=13% Similarity=0.169 Sum_probs=150.3
Q ss_pred CHHHHHHHHH--------HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 6899999842--------00001110024665445678813799999999999999832027898777666504899999
Q 001837 60 SQHQIVKALN--------QARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILK 131 (1007)
Q Consensus 60 s~~~I~~aL~--------~~gy~a~~~~~g~~~~~~~~~~~~~~~~gill~~~l~~~~~~~l~~l~l~~~~~~~~p~~~~ 131 (1007)
+.+++.+.++ +.+.+.++..+|+|..+.+.+++++.. +++.|.+|+.+++.++.++++.- .
T Consensus 8 ~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~--------~~~~~~~~~~~iL~~aa~ls~~~---~ 76 (472)
T d1wpga4 8 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWEL--------VIEQFEDLLVRILLLAACISFVL---A 76 (472)
T ss_dssp CHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHH--------HHHHTCSHHHHHHHHHHHHHHHH---H
T ss_pred CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH--------HHHHHHCHHHHHHHHHHHHHHHH---H
T ss_conf 999999996969355969999999998049987999999999999--------99998389999999999999999---9
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECC
Q ss_conf 99999727321889999999888743447999999999999999999999899999998640187616992199896188
Q 001837 132 GLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAG 211 (1007)
Q Consensus 132 a~~~lr~~~l~i~~Li~iai~~a~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~v~v~rdg~~V~~~ 211 (1007)
. ...+ ......|+++++|++++.++..+..+++.|+++.++++.+..+..
T Consensus 77 ~---~~~~--------------~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~------------- 126 (472)
T d1wpga4 77 W---FEEG--------------EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA------------- 126 (472)
T ss_dssp H---TSCT--------------TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------
T ss_pred H---HHCC--------------CCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCCC-------------
T ss_conf 8---7326--------------532023767666311244652577677501777888775212223-------------
Q ss_pred CCCCCCEEEEECCCCCCCCEEEEECEEEEECCCCCCCCEEEEECCCCEEEECEEEEEEEEEEEEEEEECCEEEEHHHHHH
Q ss_conf 85559399982897225418999320333235588987016824898243100884310999999970650770258779
Q 001837 212 EVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291 (1007)
Q Consensus 212 dLv~GDII~I~~Ge~IPaDgiIl~G~~~VDES~LTGES~pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~~ki~~lv 291 (1007)
..||++|+|.
T Consensus 127 ----------~~~~~~P~d~------------------------------------------------------------ 136 (472)
T d1wpga4 127 ----------TEQDKTPLQQ------------------------------------------------------------ 136 (472)
T ss_dssp ----------CCCCCCHHHH------------------------------------------------------------
T ss_pred ----------CCCCCCHHHH------------------------------------------------------------
T ss_conf ----------5665864888------------------------------------------------------------
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 9962020289999989987576999999999999888715---------8865678988754452103443124479999
Q 001837 292 EEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALG---------VSNHKQWFHLALVVLVSACPCALILSTPVVT 362 (1007)
Q Consensus 292 ~~a~~~ks~~q~~~~~ia~~~~~ivliiali~~ii~~~~~---------~~~~~~~~~~ai~vLi~a~P~aL~la~~ia~ 362 (1007)
++++.+..+.....+++...+....... .......+..+++++++++|++||+++++++
T Consensus 137 ------------~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~L 204 (472)
T d1wpga4 137 ------------KLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCL 204 (472)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_conf ------------99999999989999787999999999999998610468999999999999999867516899999999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCC--CCCCCCCEEEE
Q ss_conf 9999999773981112236643047439974276--54102934999
Q 001837 363 YCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKT--GTITRGEFVMS 407 (1007)
Q Consensus 363 ~~a~~~l~k~gilvk~~~~lE~Lg~Vd~I~fDKT--GTLT~~~m~v~ 407 (1007)
..+.++|+|++++||+..++|++|+..++|+||| ++||.|-+.+.
T Consensus 205 a~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 205 ALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp HHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998636606658999999999888867764013343699999
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.93 E-value=1.2e-08 Score=82.37 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHHHH
Q ss_conf 6799999997538-9----09999199469998761993199289996878850499991699361999999999
Q 001837 574 EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLAR 643 (1007)
Q Consensus 574 e~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~gR 643 (1007)
..|...++.+... | .++++||+.||.+||+.|++||+|+ ++.+.+++.||+|+..++..++.+++...-
T Consensus 151 ~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 151 INKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp CCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHHHH
T ss_conf 67613320112110013324256626730799999789079988-987999985799989998478999999999
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.92 E-value=1.7e-08 Score=81.09 Aligned_cols=109 Identities=21% Similarity=0.309 Sum_probs=89.2
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH-CC----EEEEECCCCCCHHHHHH
Q ss_conf 99999997899199991899999999999919996519831698679999999753-89----09999199469998761
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ-EG----KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 530 ~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~-~g----~VamVGDG~ND~~aL~~ 604 (1007)
.+|..|+..|+.+.++||+....+...++.+++. .++....+ |...++.+.+ .+ .|+++||+.||.++|+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~~~~--K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~ 114 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKLE--KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCSC--HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCC--CCCCCCCC--HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf 8887876521789996698446789987632122--01101363--8889999999866775225770588407899966
Q ss_pred CCEEEEECCCCCHHHHHHCCEEEECCC----CCHHHHHHHHHH
Q ss_conf 993199289996878850499991699----361999999999
Q 001837 605 ADIGISMGISGSALATETGQVILMSND----IRKVPEAIRLAR 643 (1007)
Q Consensus 605 AdVGIa~g~~g~~~a~~~ADivl~~~~----l~~I~~~I~~gR 643 (1007)
+++++||+ ++.+.++..||+|+..+. ++.+.+.|...+
T Consensus 115 ~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~ 156 (177)
T d1k1ea_ 115 CGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQ 156 (177)
T ss_dssp SSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred CCEEEECC-CCCHHHHHHCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 89289848-8649999858999178899763999999999988
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.90 E-value=2.4e-08 Score=79.96 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 6799999997538-9----099991994699987619931992899968788504999916993619999999
Q 001837 574 EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 574 e~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
..|...++.+.+. | .|+++|||.||.+|++.|+++|+|+ ++.+..++.||+++..++..+|.++++.
T Consensus 150 ~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 150 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 52278999876651002302256448843599999779089988-9759999849999898984889999998
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=1e-08 Score=82.81 Aligned_cols=111 Identities=23% Similarity=0.296 Sum_probs=91.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEC-------------------CCHHHHHHHHHHH
Q ss_conf 431119999999997899199991899999999999919996519831-------------------6986799999997
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-------------------LLPEDKAKIINQF 583 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~~v~a~-------------------~~Pe~K~~iI~~l 583 (1007)
.++|++.+.|+.|++.|++++|+||.....+..+++.+|++...+++. ..+..|..+++.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 04777999999997379979998999358888889870996100366553222000003642224652422089999999
Q ss_pred HHC-C--EEEEECCCCCCHHHHHHCCEEEEECC-CCCHHHHHHCCEEEECCCCCHH
Q ss_conf 538-9--09999199469998761993199289-9968788504999916993619
Q 001837 584 KQE-G--KTAMIGDGINDAPALATADIGISMGI-SGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 584 q~~-g--~VamVGDG~ND~~aL~~AdVGIa~g~-~g~~~a~~~ADivl~~~~l~~I 635 (1007)
+.. + .+.++|||.||++|++.|+++|+++. ......++.+|+++ .+|..|
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~el 215 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVEL 215 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGG
T ss_pred HHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEE--CCHHHH
T ss_conf 863486663899717865998986892199798777899998689986--898884
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.85 E-value=1.2e-08 Score=82.20 Aligned_cols=70 Identities=24% Similarity=0.461 Sum_probs=59.1
Q ss_pred CCCHH--HHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 16986--799999997538-9----09999199469998761993199289996878850499991699361999999
Q 001837 570 ELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 570 ~~~Pe--~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
+++|. .|...++.+.+. | .++++|||.||.+||+.|+.|++|+ ++.+..+..|++++.+++-.++..+++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 99555402366898877650557204999929788899998489189968-998999985898827887558999999
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=1.3e-08 Score=82.05 Aligned_cols=75 Identities=20% Similarity=0.332 Sum_probs=69.5
Q ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 245049999952999910799999987189991399996279869999769853689999984200001110024
Q 001837 6 ERKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAY 80 (1007)
Q Consensus 6 ~~~~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~~~ 80 (1007)
...+.++.|.|+||+|++|++.||+.|++++||..+++|+.++++.|.||+..++..+|.+.|++.||++.+...
T Consensus 4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~ 78 (79)
T d1kvja_ 4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP 78 (79)
T ss_dssp STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred CCCCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEECCC
T ss_conf 788259999989945489999999998637994699998889999999899999999999999950997475799
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=9.4e-09 Score=83.17 Aligned_cols=69 Identities=28% Similarity=0.432 Sum_probs=65.3
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 499999529999107999999871899913999962798699997698536899999842000011100
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVR 78 (1007)
Q Consensus 10 ~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~ 78 (1007)
++..|.|+||+|++|++.||+.|.+++||.+++||+.++++.|.|||..++..+|.++++++||++.+.
T Consensus 3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~ 71 (72)
T d2aw0a_ 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEC
T ss_conf 799999999016889999999872689967999988899999998999999999999999509995828
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=1.4e-08 Score=81.78 Aligned_cols=74 Identities=23% Similarity=0.318 Sum_probs=68.2
Q ss_pred CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 45049999952999910799999987189991399996279869999769853689999984200001110024
Q 001837 7 RKYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAY 80 (1007)
Q Consensus 7 ~~~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~~~ 80 (1007)
.....+.|.|+||+|++|+++||+.|..++||.++++|+.++++.|.|++..++.++|.+.|++.||.+.+...
T Consensus 6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~ 79 (84)
T d1q8la_ 6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred CCCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEECEEECCCCCCHHHHHHHHHHHCCCCEECCC
T ss_conf 88779999979918689999999998628995699998999978515446613899999999970996087687
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=98.80 E-value=1.8e-08 Score=80.91 Aligned_cols=68 Identities=25% Similarity=0.381 Sum_probs=64.6
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 04999995299991079999998718999139999627986999976985368999998420000111
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEAN 76 (1007)
Q Consensus 9 ~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~ 76 (1007)
|.+..|.|+||+|++|++.||+.|++++||.++++|+.++++.|.||+..++.++|.+.+++.||++.
T Consensus 1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEEC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 92799999991478999999999843899569999887999999989998999999999997497621
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=98.79 E-value=1.8e-08 Score=80.88 Aligned_cols=70 Identities=26% Similarity=0.400 Sum_probs=65.8
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 0499999529999107999999871899913999962798699997698536899999842000011100
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVR 78 (1007)
Q Consensus 9 ~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~ 78 (1007)
.+.+.|.|+||+|++|++.||+.|..++||.++++|+.++++.|.||+..++.++|.+.|++.||++.+.
T Consensus 2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~ 71 (72)
T d1osda_ 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEC
T ss_conf 8089999899201899999999997499967999986799999998999999999999999609996807
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=2.8e-08 Score=79.35 Aligned_cols=71 Identities=24% Similarity=0.314 Sum_probs=59.1
Q ss_pred ECCCHH--HHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 316986--799999997538-9----09999199469998761993199289996878850499991699361999999
Q 001837 569 SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 569 a~~~Pe--~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
..+.|. .|...++.+.+. + .++++|||.||.+||+.|++|++|+ ++.+..+..|++++.+++-.++.++++
T Consensus 189 ~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 189 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EEECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 885278887654200001100114201799918676799998589189967-987999985898838898583999999
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=98.76 E-value=1.9e-08 Score=80.65 Aligned_cols=71 Identities=24% Similarity=0.364 Sum_probs=66.5
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 49999952999910799999987189991399996279869999769853689999984200001110024
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAY 80 (1007)
Q Consensus 10 ~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~~~ 80 (1007)
.+..|.|+||+|++|++.||+.|..++||..+.+|+.++++.|.|||..++..+|.+.|+++||++.+...
T Consensus 2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (79)
T d1p6ta2 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 72 (79)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCC
T ss_conf 38999989953689999999997557990799999689899999899989999999999987996077886
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=98.75 E-value=2.5e-08 Score=79.83 Aligned_cols=65 Identities=29% Similarity=0.490 Sum_probs=62.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99952999910799999987189991399996279869999769853689999984200001110
Q 001837 13 YFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 13 ~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~ 77 (1007)
.|.|+||+|++|+++||+.|+.++||.+++||+.++++.|.||+..++.++|.+.+++.||++.+
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~v 67 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 88989867589999999997569993799998779999999899999999999999964998398
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=1.1e-08 Score=82.48 Aligned_cols=71 Identities=23% Similarity=0.273 Sum_probs=60.3
Q ss_pred ECCCHH--HHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 316986--799999997538-9----09999199469998761993199289996878850499991699361999999
Q 001837 569 SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 569 a~~~Pe--~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
.+++|. .|...++.+.+. | .|+++|||.||.+||+.|+.|++|+ ++.+..++.|++++.+++-.++..+|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 888458657778888776650214241899908844199998589189958-998999984788818898459999999
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=98.70 E-value=4.8e-08 Score=77.49 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=63.9
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
Q ss_conf 50499999529999107999999871899913999962798699997698536899999842000011
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEA 75 (1007)
Q Consensus 8 ~~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a 75 (1007)
+..++.|.|+||+|++|+++||+.|.+++||.++++|+.++++.|.||+..++..+|.+.+++.||+.
T Consensus 4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred CCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 85699999999241899999999997499957999986799999998999899999999999719863
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.68 E-value=4.2e-08 Score=78.00 Aligned_cols=69 Identities=19% Similarity=0.371 Sum_probs=63.8
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 4999995299991079999998718999139999627986999976985368999998420000111002
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRA 79 (1007)
Q Consensus 10 ~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~~ 79 (1007)
+++.|.|+||+|++|++.||+.|.+++||.+++||+.++++.|.||+. .+.++|.+++++.||++.+.+
T Consensus 2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~a~~~~ 70 (72)
T d2ggpb1 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE-VTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS-CCHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC-CCHHHHHHHHHHHCCCEEECC
T ss_conf 699999899165899999999983589955999988899999999999-999999999997199809826
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.66 E-value=1.5e-07 Score=73.60 Aligned_cols=109 Identities=22% Similarity=0.371 Sum_probs=90.9
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCEEEEEECHHHH
Q ss_conf 99996238877898999999994210299948999999836179999987755510005982399998899997048889
Q 001837 405 VMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIA 484 (1007)
Q Consensus 405 ~v~~i~~~~~~~~~~~lL~~aa~~e~~s~hPi~~AI~~~a~~~g~~~~~~~v~~~~~~~g~Gi~~~i~g~~i~ig~~~~~ 484 (1007)
+|.++.+.+ .+.+++|.+++++|..|.||+++||+.++++.++.. ..+++++.++|.|+.+ +.+.+|+.+|+
T Consensus 1 eVt~i~~~~--~~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~--~~~~~~~~~~G~Gi~g----~~v~vG~~~~~ 72 (113)
T d2b8ea2 1 EVTDLVPLN--GDERELLRLAAIAERRSEHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLM 72 (113)
T ss_dssp EEEEEEESS--SCHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHH
T ss_pred CCEEEEECC--CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC--CCCCCCEEECCCEEEE----EEEEECCHHHH
T ss_conf 934999569--999999999999877687823999999999805787--7632316631633786----89997768877
Q ss_pred HHHCCCCCCC----CCCCCCCCCEEEEEEECCEEEEEEEEC
Q ss_conf 9809999888----679677997299998799799999942
Q 001837 485 QRAGCGTVPS----VDGPKMKGNTIGYIFSGASPVGIFCLS 521 (1007)
Q Consensus 485 ~~~~~~~~~~----~~~~~~~g~~vi~va~d~~~lGli~l~ 521 (1007)
.+.++...+. .......|+++++++.|..++|+|++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~G~T~v~va~d~~~~G~iala 113 (113)
T d2b8ea2 73 EDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVS 113 (113)
T ss_dssp HHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEE
T ss_pred HHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEC
T ss_conf 76099889899999999986799599999999999999979
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.58 E-value=1.4e-07 Score=73.75 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=59.9
Q ss_pred CCCHH--HHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 16986--799999997538-9----09999199469998761993199289996878850499991699361999999
Q 001837 570 ELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 570 ~~~Pe--~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
+++|. .|...++.+.+. | .|+++||+.||.+||+.+++|++|+ ++.+.+++.|++++.+++-.+++.+++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 65587775167899998860368220899808844099998689089948-998999985898858887538999999
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.55 E-value=9.9e-07 Score=67.03 Aligned_cols=120 Identities=18% Similarity=0.137 Sum_probs=88.8
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCEECC---C-CCEEEEECCEEEEEE
Q ss_conf 99996238877898999999994210299948999999836179999-987755510005---9-823999988999970
Q 001837 405 VMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEP-KPEDVEDYQNFP---G-EGIYGKIGGEEIYIG 479 (1007)
Q Consensus 405 ~v~~i~~~~~~~~~~~lL~~aa~~e~~s~hPi~~AI~~~a~~~g~~~-~~~~v~~~~~~~---g-~Gi~~~i~g~~i~ig 479 (1007)
.+.++.|.+ .++.+++|.+++.+|..|.||+++||++++++.+... ..........++ . .+....++|..+.+|
T Consensus 3 q~td~ip~~-G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~G 81 (136)
T d2a29a1 3 QASEFIPAQ-GVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKG 81 (136)
T ss_dssp EEEEEEECT-TCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEETTEEEEEE
T ss_pred CCCEEEECC-CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEC
T ss_conf 754677379-9999999999999727778668999999999855877553110124444543234258898789799966
Q ss_pred CHHH----HHHHCCCCCCC----CCCCCCCCCEEEEEEECCEEEEEEEECCCCC
Q ss_conf 4888----99809999888----6796779972999987997999999427431
Q 001837 480 NRKI----AQRAGCGTVPS----VDGPKMKGNTIGYIFSGASPVGIFCLSDACR 525 (1007)
Q Consensus 480 ~~~~----~~~~~~~~~~~----~~~~~~~g~~vi~va~d~~~lGli~l~D~lR 525 (1007)
+..+ +...+....+. .+....+|.++++++.|.+++|+|.+.|++|
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 82 SVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 135 (136)
T ss_dssp CHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETTEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEEECC
T ss_conf 789999999971898809999999999977985999999999999999983058
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.54 E-value=5.3e-07 Score=69.17 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHC----C-EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCH-HHHHHH
Q ss_conf 799999997538----9-09999199469998761993199289996878850499991699361-999999
Q 001837 575 DKAKIINQFKQE----G-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRK-VPEAIR 640 (1007)
Q Consensus 575 ~K~~iI~~lq~~----g-~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~-I~~~I~ 640 (1007)
.|...++.+.+. . .|+++|||.||.+||+.|++|++|+ ++.+.++..||+++..++-.+ +..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 0577888776641002020799648763699998589189968-9989999848999998488869999999
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=2.2e-07 Score=72.31 Aligned_cols=69 Identities=23% Similarity=0.375 Sum_probs=62.4
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 49999952999910799999987189991399996279869999769853689999984200001110024
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAY 80 (1007)
Q Consensus 10 ~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~~~ 80 (1007)
.+..|.|+||+|++|++.||+.|.+++||..+.||+.++++.|.+++. ..++|.+.+.++||.+.....
T Consensus 3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~i~~~i~~~GY~v~~~~~ 71 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRDEQA 71 (73)
T ss_dssp CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCCCCBCCS
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC--CHHHHHHHHHHCCCCCCCCCC
T ss_conf 889999899577899999999996489945999988999999998999--999999999976993567888
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.51 E-value=5.4e-07 Score=69.12 Aligned_cols=115 Identities=23% Similarity=0.343 Sum_probs=90.7
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECC-----------------CHHHHHHHHHH-
Q ss_conf 274311199999999978991999918999999999999199965198316-----------------98679999999-
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSEL-----------------LPEDKAKIINQ- 582 (1007)
Q Consensus 521 ~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~~v~a~~-----------------~Pe~K~~iI~~- 582 (1007)
..++.+++.+.++.++..|..+.++|+.....+....++.++. .++... .+..|...+..
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 0001355999999999749878763265422223022203204--66654421101222123332111123454103357
Q ss_pred ---HHHCC-EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHH
Q ss_conf ---75389-0999919946999876199319928999687885049999169936199999
Q 001837 583 ---FKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 583 ---lq~~g-~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I 639 (1007)
++... .++++|||.||++|++.|++||+| ++.+..++.||+++.++|+.+|..+|
T Consensus 151 ~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 151 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE--CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 888466655417863784749999988987899--98999997499999179999999986
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.50 E-value=1.1e-07 Score=74.78 Aligned_cols=119 Identities=17% Similarity=0.148 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEE-----------------------ECCCHHHHHHH
Q ss_conf 4311199999999978991999918999999999999199965198-----------------------31698679999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH-----------------------SELLPEDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~~v~-----------------------a~~~Pe~K~~i 579 (1007)
+++|++.+.++.|++.|++++++|+.....+..+.+++|+... ++ ....|+.|..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~-~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG-EEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC-EEEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 4249999999999854253115775306669999998099501-454347982881022010135432556789999999
Q ss_pred HHHHHHCC-EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHH-HCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 99975389-0999919946999876199319928999687885-04999916993619999999999
Q 001837 580 INQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATE-TGQVILMSNDIRKVPEAIRLARK 644 (1007)
Q Consensus 580 I~~lq~~g-~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~-~ADivl~~~~l~~I~~~I~~gR~ 644 (1007)
++.++..+ .|+||||+.||++|+++||++++++ ...+.+.+ ..+++. -+++..|...+..-..
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKE 218 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHH
T ss_pred HHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEEC-CHHHHHHHCCCCEEE-CCCHHHHHHHHHHHHH
T ss_conf 9984678863899807631399999889978706-467999982998362-4999999999999878
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.48 E-value=9.7e-08 Score=75.06 Aligned_cols=71 Identities=25% Similarity=0.394 Sum_probs=59.3
Q ss_pred CCCHH--HHHHHHHHHHHC-C----EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 16986--799999997538-9----099991994699987619931992899968788504999916993619999999
Q 001837 570 ELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 570 ~~~Pe--~K~~iI~~lq~~-g----~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
++.|. .|...++.+.+. | .++++|||.||.+||+.|+.|++|+ ++.+.+++.|++|..+++-.++..+|+.
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 99748899999999998732235755167658855599998489089958-9989999847978088875689999998
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.48 E-value=9.7e-07 Score=67.09 Aligned_cols=45 Identities=27% Similarity=0.314 Sum_probs=33.9
Q ss_pred EEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHH
Q ss_conf 0999919946999876199319928999687885049999169936199999
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 588 ~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I 639 (1007)
.++++|||.||.+||+.|+.||+|+ ++.+..++.+ +++..+.++|
T Consensus 198 ~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~------~~i~~~~~~i 242 (243)
T d1wzca1 198 ESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNV------SSIIDVLEVI 242 (243)
T ss_dssp EEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEE------SCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHCCCCEEEEC-CCCHHHHHHH------HHHHHHHHHH
T ss_conf 1999849885899998499389927-9986887023------1888888741
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.45 E-value=1.9e-06 Score=64.77 Aligned_cols=117 Identities=21% Similarity=0.152 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC-------------EEEECCCHHHHHHHHHHHHHCC-E
Q ss_conf 4311199999999978991999918999999999999199965-------------1983169867999999975389-0
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------VVHSELLPEDKAKIINQFKQEG-K 588 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~-------------~v~a~~~Pe~K~~iI~~lq~~g-~ 588 (1007)
...+.....+..+ +.+.+.+++++.............++... .......+..+...++.++... .
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e 147 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 5562488999886-047468885167138888999984783333110256214445432112014578899986425652
Q ss_pred EEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHHH
Q ss_conf 999919946999876199319928999687885049999169936199999999
Q 001837 589 TAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 589 VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~g 642 (1007)
|+++|||.||++||+.|++||||+ +..++.++++|+++. +++..+...|...
T Consensus 148 viaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 148 VIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHCCCCEEEC-CCHHHHHHCCCCEEE-CCHHHHHHHHHHH
T ss_conf 188438732799998589409978-977999867895562-6889999999997
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.27 E-value=3.2e-06 Score=62.95 Aligned_cols=67 Identities=16% Similarity=0.315 Sum_probs=60.1
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 50499999529999107999999871899913999962798699997698536899999842000011100
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVR 78 (1007)
Q Consensus 8 ~~~~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~ 78 (1007)
...+..|.|+ |+|++|++.||+.|.+++||..+.+|+.++++.|.++ .++++|.+.|++.||++.++
T Consensus 4 ~~~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~---~~~~~i~~~I~~~G~~A~l~ 70 (72)
T d1qupa2 4 DTYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIR 70 (72)
T ss_dssp GCEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEEEEC-CCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEE---CCHHHHHHHHHHHCCCEEEE
T ss_conf 7389999995-4988999999999866998049999888999999754---89999999999749988981
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.20 E-value=3.3e-06 Score=62.84 Aligned_cols=106 Identities=20% Similarity=0.177 Sum_probs=66.8
Q ss_pred EEECCCCCCCHHHHHHHHHHCCCEEEEE-CCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHC-C----EEEE
Q ss_conf 9942743111999999999789919999-18999999999999199965198316986799999997538-9----0999
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAML-TGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-G----KTAM 591 (1007)
Q Consensus 518 i~l~D~lR~~a~~aI~~Lk~~GI~v~il-TGD~~~ta~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~-g----~Vam 591 (1007)
....+.......+..+.++......... +++. .+..-.....|...++.+.+. | .+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~ 183 (244)
T d1s2oa1 120 HLDPQACPTVIDQLTEMLKETGIPVQVIFSSGK----------------DVDLLPQRSNKGNATQYLQQHLAMEPSQTLV 183 (244)
T ss_dssp EECTTSCTHHHHHHHHHHHTSSCCEEEEEETTT----------------EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC----------------EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE
T ss_conf 525211589999999999863234126630781----------------8999867641557788887741577303799
Q ss_pred ECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCC-------EEEECCCCCHHHHHHH
Q ss_conf 919946999876199319928999687885049-------9991699361999999
Q 001837 592 IGDGINDAPALATADIGISMGISGSALATETGQ-------VILMSNDIRKVPEAIR 640 (1007)
Q Consensus 592 VGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~AD-------ivl~~~~l~~I~~~I~ 640 (1007)
+|||.||.+||+.++.|++|+ ++.+..++.|| ++...++..++.++++
T Consensus 184 ~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 184 CGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHCCCEEEEC-CCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 758887799996189189967-9999999986323666537718997148999999
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Probab=98.15 E-value=1.5e-06 Score=65.68 Aligned_cols=61 Identities=18% Similarity=0.275 Sum_probs=56.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
Q ss_conf 9999529999107999999871899913999962798699997698536899999842000011
Q 001837 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEA 75 (1007)
Q Consensus 12 ~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a 75 (1007)
+.|.|+||+|++|+++||+.|..++||.++.+|+.++++.|.++ .+.++|.+++.+.||++
T Consensus 3 ~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~---~~~~~i~~~i~~~GY~v 63 (64)
T d1sb6a_ 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIASAGHEV 63 (64)
T ss_dssp EEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESS---SCHHHHHHHHHHHCCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCC---CCHHHHHHHHHHCCCCC
T ss_conf 99997990463078999999855999069871478879999267---99999999999829988
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.15 E-value=7.9e-06 Score=59.85 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=59.6
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHCC-CCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 5049999952999910799999987189-991399996279869999769853689999984200001110
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSL-EGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 8 ~~~~~~l~I~Gl~C~~Ca~~IE~~L~~l-~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~ 77 (1007)
.++++.|.|+ |+|.+|+..|++.|.++ +||.++.+|+.++++.|..+ .++++|.+.+++.||.+.-
T Consensus 2 ~~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~ 68 (72)
T d1cc8a_ 2 EIKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS 68 (72)
T ss_dssp CCEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred CCEEEEEEEC-CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEC---CCHHHHHHHHHHHCCCCCC
T ss_conf 8589999987-39388899999999737674389999889989999406---9999999999997996588
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=2.6e-05 Score=55.64 Aligned_cols=42 Identities=31% Similarity=0.334 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHH-HHCC----EEEEECCCCCCHHHHHHCCEEEEEC
Q ss_conf 6986799999997-5389----0999919946999876199319928
Q 001837 571 LLPEDKAKIINQF-KQEG----KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 571 ~~Pe~K~~iI~~l-q~~g----~VamVGDG~ND~~aL~~AdVGIa~g 612 (1007)
.+-..+...+..+ ++.| .++++||+.||.+||+.|++||+|.
T Consensus 183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred CHHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEEE
T ss_conf 51789999999999975989521999849786899998199089971
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Probab=98.09 E-value=5.6e-06 Score=61.05 Aligned_cols=63 Identities=19% Similarity=0.363 Sum_probs=57.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 99999529999107999999871899913999962798699997698536899999842000011100
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVR 78 (1007)
Q Consensus 11 ~~~l~I~Gl~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~d~~~~s~~~I~~aL~~~gy~a~~~ 78 (1007)
+.+|.| +|+|.+|+.+||++|++++|+ ++.+|+.++++.|.++ .+.+.|.+++++.||.+.+.
T Consensus 2 k~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~---~~~~~i~~~I~~~Gy~a~li 64 (66)
T d1fe0a_ 2 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYL 64 (66)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEE
T ss_pred CEEEEE-CCCCHHHHHHHHHHHHCCCCC-EEEEECCCCEEEEEEE---CCHHHHHHHHHHHCCEEEEE
T ss_conf 789998-419668888999998548986-9999868889999851---99999999999859959995
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.73 E-value=0.00022 Score=48.32 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC---EEEE-------CCCHHHHHHHHHHHHHC-C-EEE
Q ss_conf 4311199999999978991999918999999999999199965---1983-------16986799999997538-9-099
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHS-------ELLPEDKAKIINQFKQE-G-KTA 590 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~---~v~a-------~~~Pe~K~~iI~~lq~~-g-~Va 590 (1007)
.+.|++.++++.|++.|+++.++|+.+...+..+.+.+|+... .+++ ...|+.-...++.+... . .++
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v 178 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 178 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE
T ss_conf 31775799999988502441101798356688889987640122334455543222345817789999995898765189
Q ss_pred EECCCCCCHHHHHHCCEE-EEECCCCCH---------------------------HHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 991994699987619931-992899968---------------------------788504999916993619999999
Q 001837 591 MIGDGINDAPALATADIG-ISMGISGSA---------------------------LATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 591 mVGDG~ND~~aL~~AdVG-Ia~g~~g~~---------------------------~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
||||..+|+.+-+.|++. |++. .|.. ....-||+++ +++..|+.+|..
T Consensus 179 ~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~~ 254 (257)
T d1swva_ 179 KVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEH 254 (257)
T ss_dssp EEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHCCCEEEEEC-CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE--CCHHHHHHHHHH
T ss_conf 99687340899998799899981-37777898989986279999999999999999747998998--799999999999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.67 E-value=0.00014 Score=49.81 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=82.4
Q ss_pred CCCCCHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHHCCCCC--EEEEC---CC--H--HHHHHHHHHHHHCC----E
Q ss_conf 43111999999999789-91999918999999999999199965--19831---69--8--67999999975389----0
Q 001837 523 ACRTGAAEAVNQLKSLG-IRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE---LL--P--EDKAKIINQFKQEG----K 588 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~G-I~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~---~~--P--e~K~~iI~~lq~~g----~ 588 (1007)
++.|++.+++++|++.| +++.++|+.....+..+.+.+|+... .+... .. | +.-...+..+...+ .
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~ 170 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 170 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 10685288876541123112235578850000012332012222222222233443454157788876530024877668
Q ss_pred EEEECCCCCCHHHHHHCCE---EEEECCCCCH-HHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 9999199469998761993---1992899968-788504999916993619999999
Q 001837 589 TAMIGDGINDAPALATADI---GISMGISGSA-LATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 589 VamVGDG~ND~~aL~~AdV---GIa~g~~g~~-~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
++||||+.+|+.+.+.|++ +|+.|....+ .....+|+++ +++..+.+++..
T Consensus 171 ~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~~ 225 (228)
T d2hcfa1 171 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLAS 225 (228)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHHH
T ss_pred HEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHHH
T ss_conf 0232487278999998499799980799998899658999998--999999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.63 E-value=0.00011 Score=50.75 Aligned_cols=115 Identities=16% Similarity=0.150 Sum_probs=85.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEE-C------CCHHHHHHHHHHHHHCC-EEEEE
Q ss_conf 4311199999999978991999918999999999999199965--1983-1------69867999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-E------LLPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a-~------~~Pe~K~~iI~~lq~~g-~VamV 592 (1007)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... .++. . ..|+--..+.+.++-.. .++||
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~i 174 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFV 174 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 16889999999985068742021345288999999864963421431123334544321013578998864311002021
Q ss_pred CCCCCCHHHHHHCCE-EEEEC--C-CCCHHHHHHCCEEEECCCCCHHHHHH
Q ss_conf 199469998761993-19928--9-99687885049999169936199999
Q 001837 593 GDGINDAPALATADI-GISMG--I-SGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 593 GDG~ND~~aL~~AdV-GIa~g--~-~g~~~a~~~ADivl~~~~l~~I~~~I 639 (1007)
||..+|..+.+.+++ .|.+. . ...+.....+|+++ +++..|++++
T Consensus 175 gD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 175 GDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred CCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 176989999999099599991799983406666999998--9999998863
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.002 Score=40.73 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHH---------------HHHHHHHCCCCCEEE-E------------------
Q ss_conf 311199999999978991999918999999---------------999999199965198-3------------------
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAA---------------MQAQEQLGNALNVVH-S------------------ 569 (1007)
Q Consensus 524 lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta---------------~~ia~~lGi~~~~v~-a------------------ 569 (1007)
+-|++.++++.|+++|++++++|....... .......|+....++ +
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~r 107 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCR 107 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSS
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 88789999999866184166664220235566678765401012445555401344540565533346655333455556
Q ss_pred CCCHHHHHHHHHHHHHCC-EEEEECCCCCCHHHHHHCCEE--EEEC--CCCCHHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 169867999999975389-099991994699987619931--9928--9996878850499991699361999999
Q 001837 570 ELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIG--ISMG--ISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 570 ~~~Pe~K~~iI~~lq~~g-~VamVGDG~ND~~aL~~AdVG--Ia~g--~~g~~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
...|+--..+++.+.-.. .+.||||..+|..|-++|+++ +.+. ....+.....||+++ +++..++++|+
T Consensus 108 KP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 108 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp TTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHC
T ss_conf 874322310122116553445122798999999998288847998999777721024798898--99999999963
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.40 E-value=7.7e-05 Score=51.92 Aligned_cols=62 Identities=16% Similarity=0.332 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 7999999975389099991994699987619931992899968788504999916993619999999
Q 001837 575 DKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 575 ~K~~iI~~lq~~g~VamVGDG~ND~~aL~~AdVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
.|...++.|.....++++||+.||.+||+.++.|++++ .|.. +..|++.+ ++...+..+++.
T Consensus 159 ~Kg~al~~l~~~~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~--~~~~ev~~~l~~ 220 (229)
T d1u02a_ 159 NKGSAIRSVRGERPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHV--ADYIEMRKILKF 220 (229)
T ss_dssp CHHHHHHHHHTTSCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEE--SSHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCEEEEE-ECCC--CCCCEEEC--CCHHHHHHHHHH
T ss_conf 88999999744044566438887099996028828999-6898--76672875--999999999999
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.00032 Score=47.00 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC--CEEEEC-------CCHHHHHHHHHHHHHCC-EEEEE
Q ss_conf 431119999999997899199991899999999999919996--519831-------69867999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-------LLPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~--~~v~a~-------~~Pe~K~~iI~~lq~~g-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. ..++.. ..|+--..+++.+.-.. .++||
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i 167 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 167 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCEEE
T ss_conf 45632799988754034552213321000111222222333222222232322210145789999999729995130899
Q ss_pred CCCCCCHHHHHHCCEE-EEECC-CC-CHHHHHHCCEEEECCCCCHH
Q ss_conf 1994699987619931-99289-99-68788504999916993619
Q 001837 593 GDGINDAPALATADIG-ISMGI-SG-SALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 593 GDG~ND~~aL~~AdVG-Ia~g~-~g-~~~a~~~ADivl~~~~l~~I 635 (1007)
||+.+|+.+.+.+++. |.+.. .. .+.....||+++ +++..+
T Consensus 168 gD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 168 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred EECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEE--CCHHHC
T ss_conf 60989999999839979998998776662235899998--992669
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.36 E-value=0.0016 Score=41.47 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=82.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEECC-----------------CHHHHHHHH---
Q ss_conf 4311199999999978991999918999999999999199965--198316-----------------986799999---
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSEL-----------------LPEDKAKII--- 580 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~~-----------------~Pe~K~~iI--- 580 (1007)
++|+++.+.++.|++.|+++.++||--...+..+++++|+... .++++- ....|...+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~ 214 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN 214 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHH
T ss_conf 76638999999999749708998587399999999982998657469965799708826860347864345686315445
Q ss_pred -HHHHH--C-CEEEEECCCCCCHHHHHH---CCEE--EEECCCCCH----HHHHHCCEEEECCCCCHHHHHHH
Q ss_conf -99753--8-909999199469998761---9931--992899968----78850499991699361999999
Q 001837 581 -NQFKQ--E-GKTAMIGDGINDAPALAT---ADIG--ISMGISGSA----LATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 581 -~~lq~--~-g~VamVGDG~ND~~aL~~---AdVG--Ia~g~~g~~----~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
..++. . ..+.++|||.||+.|.+. ++.. |++-....+ .-.++=|+|+.++.--.++..+.
T Consensus 215 ~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~il 287 (291)
T d2bdua1 215 TDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 287 (291)
T ss_dssp HHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf 9988532786768999677768999838854463245431376699879998760797885687846899999
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.26 E-value=0.0026 Score=39.73 Aligned_cols=116 Identities=16% Similarity=0.209 Sum_probs=82.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC--CEEEEC-----CCH--HHHHHHHHHHHHCC-EEEEE
Q ss_conf 431119999999997899199991899999999999919996--519831-----698--67999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~--~~v~a~-----~~P--e~K~~iI~~lq~~g-~VamV 592 (1007)
.+.|++.++++.|+ .|++++++|+........+.+.+|+.. ..++.. ..| +-=..+++.+.-.. .++||
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v 178 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 51006999998764-03760366213221101110123322100223333222232213577887776406643126456
Q ss_pred CCC-CCCHHHHHHCCEE-EEECC-CCCHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 199-4699987619931-99289-9968788504999916993619999999
Q 001837 593 GDG-INDAPALATADIG-ISMGI-SGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 593 GDG-~ND~~aL~~AdVG-Ia~g~-~g~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
||. .+|+.+.+.+++. +.+.. .........+|+++ .++..++.++..
T Consensus 179 gD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 228 (230)
T d1x42a1 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVDE 228 (230)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 21748679999985998999889998701045899998--899999999997
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.14 E-value=0.0019 Score=40.86 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=79.5
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC-----EEE-----ECCCHHHHHHHHHHHHHCC-EE
Q ss_conf 274311199999999978991999918999999999999199965-----198-----3169867999999975389-09
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-----VVH-----SELLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 521 ~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~-----~v~-----a~~~Pe~K~~iI~~lq~~g-~V 589 (1007)
...+.|++.+.+++|++.|+++.++|+..........+.+|+... ..+ ....|+-=....+.+.-.. .+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCE
T ss_conf 36668878999999864247544458984889999999728404332023330245335778088899999948996748
Q ss_pred EEECCCCCCHHHHHHCCEEE-EE---CCCCCHHHHHHCCEEEECCCCCHH
Q ss_conf 99919946999876199319-92---899968788504999916993619
Q 001837 590 AMIGDGINDAPALATADIGI-SM---GISGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 590 amVGDG~ND~~aL~~AdVGI-a~---g~~g~~~a~~~ADivl~~~~l~~I 635 (1007)
+||||..+|+.+-++|++.. -+ |..........++.++ ++|..|
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i--~sl~EL 252 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFSEL 252 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGGGC
T ss_pred EEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEE--CCHHHH
T ss_conf 999479999999998599799996899899863445788179--986883
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=4.1e-05 Score=54.13 Aligned_cols=52 Identities=19% Similarity=0.295 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHCC--EEEEECCC----CCCHHHHHHCC-EEEEECCCCCHHHHHHCCEEE
Q ss_conf 7999999975389--09999199----46999876199-319928999687885049999
Q 001837 575 DKAKIINQFKQEG--KTAMIGDG----INDAPALATAD-IGISMGISGSALATETGQVIL 627 (1007)
Q Consensus 575 ~K~~iI~~lq~~g--~VamVGDG----~ND~~aL~~Ad-VGIa~g~~g~~~a~~~ADivl 627 (1007)
.|...++.|.+.. .|+++||+ .||.+||+.|+ .|+||+ ++.+..+..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECC-CHHHHHHHHHHHCC
T ss_conf 278999999669844599986889999972999971798589918-98999999998619
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.96 E-value=0.002 Score=40.57 Aligned_cols=109 Identities=17% Similarity=0.254 Sum_probs=76.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEE-------CCCHHHHHHHHHHHHHCC-EEEEE
Q ss_conf 4311199999999978991999918999999999999199965--1983-------169867999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-------ELLPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a-------~~~Pe~K~~iI~~lq~~g-~VamV 592 (1007)
.+.|++.++++.|++.|+++.++|+... .+..+.+++|+... .+++ ...|+--..+++.+.-.. .++||
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~V 160 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 4563477654211022220022113510-334433310122122222222234432025788899999829997518999
Q ss_pred CCCCCCHHHHHHCCEE-EEECCCCCHHHHHHCCEEEECCCCCHHHHHH
Q ss_conf 1994699987619931-9928999687885049999169936199999
Q 001837 593 GDGINDAPALATADIG-ISMGISGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 593 GDG~ND~~aL~~AdVG-Ia~g~~g~~~a~~~ADivl~~~~l~~I~~~I 639 (1007)
||+.+|..+.+.+++. |.+. .+.. .++..+ +++..+..++
T Consensus 161 gD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 161 GDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp ESSHHHHHHHHHHTCEEEESS-CCSC----TTEEEC--SSTTHHHHHT
T ss_pred ECCHHHHHHHHHCCCEEEEEC-CCCC----CCCEEC--CCHHHHHHHH
T ss_conf 479899999998699699984-7999----958004--8998999986
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.95 E-value=0.00099 Score=43.07 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=79.8
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEE-ECC----CHHHHHHHHHHHHHCC-EEEEECC
Q ss_conf 4311199999999978991999918999999999999199965--198-316----9867999999975389-0999919
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVH-SEL----LPEDKAKIINQFKQEG-KTAMIGD 594 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~-a~~----~Pe~K~~iI~~lq~~g-~VamVGD 594 (1007)
++.+++.+.++.|+..+ ++.++|+.....+..+.+.+|+... .++ +.. .|+-...+++.++-.. .++||||
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD 162 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECC
T ss_conf 21068999875420134-10000233210115778750123320000222322222333211012332012001646547
Q ss_pred CCCCHHHHHHCCE-EEEE--CCCCCH-HHHHHCCEEEECCCCCHHHHHH
Q ss_conf 9469998761993-1992--899968-7885049999169936199999
Q 001837 595 GINDAPALATADI-GISM--GISGSA-LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 595 G~ND~~aL~~AdV-GIa~--g~~g~~-~a~~~ADivl~~~~l~~I~~~I 639 (1007)
+.+|..|.++|++ .|.+ |....+ .....+|+++ +++..+...+
T Consensus 163 s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 7789999998599399985798997789768999998--9999999985
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.46 E-value=0.02 Score=32.65 Aligned_cols=116 Identities=12% Similarity=0.151 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEE-CC------CHHHHHHHHHHHHHCC-EEEEE
Q ss_conf 4311199999999978991999918999999999999199965--1983-16------9867999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL------LPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a-~~------~Pe~K~~iI~~lq~~g-~VamV 592 (1007)
.+.|++.++++.|++ |++++++|+..........+++|+... .++. .. .|+-=..+++.+.-.. .++||
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 187 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEE
T ss_conf 658348999998411-4606886223200123333202222222222322222210033324788999960287752420
Q ss_pred CCCC-CCHHHHHHCCEE-EEEC-CCC--CHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 1994-699987619931-9928-999--68788504999916993619999999
Q 001837 593 GDGI-NDAPALATADIG-ISMG-ISG--SALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 593 GDG~-ND~~aL~~AdVG-Ia~g-~~g--~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
||.. +|+.+.+.+++. +..- ..+ .......+|+++ +++..|+.++..
T Consensus 188 GD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 3571867999998399499997799887643357999898--999999999999
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.29 E-value=0.00078 Score=43.91 Aligned_cols=112 Identities=14% Similarity=0.182 Sum_probs=79.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEC-------CCHHHHHHHHHHHHHCC-EEEEE
Q ss_conf 4311199999999978991999918999999999999199965--19831-------69867999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-------LLPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~-------~~Pe~K~~iI~~lq~~g-~VamV 592 (1007)
++.|++.+.++.|++ ++++.++|+.....+..+.+++|+... .+++. ..|+--..+++.++-.. .++||
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V 160 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 160 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEE
T ss_conf 346403444332014-5542000232111111111222222222222222222221034443002342104511340685
Q ss_pred CCCCCCHHHHHHCCEEEEE---CCCCCHHHHHHCCEEEECCCCCHHHHH
Q ss_conf 1994699987619931992---899968788504999916993619999
Q 001837 593 GDGINDAPALATADIGISM---GISGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 593 GDG~ND~~aL~~AdVGIa~---g~~g~~~a~~~ADivl~~~~l~~I~~~ 638 (1007)
||..+|..+.++|++.... | ..+....+.+|.++ +++..|.++
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i--~~l~dll~l 206 (207)
T d2hdoa1 161 GDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRF--QKPLDILEL 206 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEE--SSGGGGGGG
T ss_pred CCCHHHHHHHHHCCCEEEEEECC-CCCHHHHHHCCCEE--CCHHHHHHH
T ss_conf 47787899999849929999358-89756765329274--899999853
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.10 E-value=0.0065 Score=36.57 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=46.4
Q ss_pred HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC-EEEEECCCC-CCHHHHHHCCE-EEEECCCCC---H---HHHHHC
Q ss_conf 99999991999651983169867999999975389-099991994-69998761993-199289996---8---788504
Q 001837 553 AMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGI-NDAPALATADI-GISMGISGS---A---LATETG 623 (1007)
Q Consensus 553 a~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~g-~VamVGDG~-ND~~aL~~AdV-GIa~g~~g~---~---~a~~~A 623 (1007)
....-...+.. ...+....|+--..+++.+.-.. .++||||+. +|+.+.++|++ +|.+. +|. + .....+
T Consensus 164 ~~~~~~~~~~~-~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~-~G~~~~~~~~~~~~~P 241 (253)
T d1yv9a1 164 VTFVETATQTK-PVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT-SGFTPKSAVPTLPTPP 241 (253)
T ss_dssp HHHHHHHHTCC-CEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEET-TSSSCSSSTTTCSSCC
T ss_pred CCCCCCCCCCE-EEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCC
T ss_conf 10001223430-365134312678789998488844237843782779999998799899989-8999978897368999
Q ss_pred CEEEECCCCCHH
Q ss_conf 999916993619
Q 001837 624 QVILMSNDIRKV 635 (1007)
Q Consensus 624 Divl~~~~l~~I 635 (1007)
|+++ +++..+
T Consensus 242 d~vi--~sl~e~ 251 (253)
T d1yv9a1 242 TYVV--DSLDEW 251 (253)
T ss_dssp SEEE--SSGGGC
T ss_pred CEEE--CCHHHC
T ss_conf 7897--997876
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.09 E-value=0.015 Score=33.65 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=64.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHHCCCCC--EEEECCCHH--HHHHHHHHHHHCC-EEEEECCCC
Q ss_conf 431119999999997899199991899-9999999999199965--198316986--7999999975389-099991994
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDN-QSAAMQAQEQLGNALN--VVHSELLPE--DKAKIINQFKQEG-KTAMIGDGI 596 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~-~~ta~~ia~~lGi~~~--~v~a~~~Pe--~K~~iI~~lq~~g-~VamVGDG~ 596 (1007)
.+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+++... .+.....|. .-..+++.+.-.. .++||||..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~ 125 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN 125 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHEEEECCCH
T ss_conf 60557999999999789948997356621010000000233332102322668976999999999688869979874878
Q ss_pred CCHHHHHHCCEE-EEEC
Q ss_conf 699987619931-9928
Q 001837 597 NDAPALATADIG-ISMG 612 (1007)
Q Consensus 597 ND~~aL~~AdVG-Ia~g 612 (1007)
.|+.+.+.+++- |.+.
T Consensus 126 ~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 126 RNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp HHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHCCCEEEEEC
T ss_conf 78999998699799979
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.05 E-value=0.02 Score=32.69 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=67.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEC-C----C--HHHHHHHHHHHHHCCEEEEEC
Q ss_conf 4311199999999978991999918999999999999199965--19831-6----9--867999999975389099991
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-L----L--PEDKAKIINQFKQEGKTAMIG 593 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~-~----~--Pe~K~~iI~~lq~~g~VamVG 593 (1007)
.+.|++.+.++.|++.|+++.++|+...... ...+.+++... .+++. . . |+--..+++.+.- ..++|||
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~-~~~l~vg 156 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI-SSGLVIG 156 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC-SSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCEEEEE
T ss_conf 0244268888877764212233455762101-3455420221222212222234568889999999998499-9769990
Q ss_pred CCCCCHHHHHHCCEE-EEECCCCCHHHHHHCC
Q ss_conf 994699987619931-9928999687885049
Q 001837 594 DGINDAPALATADIG-ISMGISGSALATETGQ 624 (1007)
Q Consensus 594 DG~ND~~aL~~AdVG-Ia~g~~g~~~a~~~AD 624 (1007)
|..+|..+.++|++- |.+ .+....++..|
T Consensus 157 Ds~~Di~aA~~aG~~~i~v--~~~~~~~~~~d 186 (187)
T d2fi1a1 157 DRPIDIEAGQAAGLDTHLF--TSIVNLRQVLD 186 (187)
T ss_dssp SSHHHHHHHHHTTCEEEEC--SCHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCEEEEE--CCCCCHHHHCC
T ss_conf 7999999999859979999--99887475357
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.96 E-value=0.012 Score=34.50 Aligned_cols=115 Identities=12% Similarity=0.018 Sum_probs=82.0
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEC-------CCHHHHHHHHHHHHHCC-EEEE
Q ss_conf 74311199999999978991999918999999999999199965--19831-------69867999999975389-0999
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-------LLPEDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 522 D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~-------~~Pe~K~~iI~~lq~~g-~Vam 591 (1007)
..+.+++.++++.++..|+++.++|+..........+..++... .+++. ..|+-=..+++.+.-.. .++|
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~ 171 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 171 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 22120107899988751785776421179999998741144553210022210001450778899999981778714899
Q ss_pred ECCCCCCHHHHHHCCEE-EEECCC--CCHHHHHHCCEEEECCCCCHHHHH
Q ss_conf 91994699987619931-992899--968788504999916993619999
Q 001837 592 IGDGINDAPALATADIG-ISMGIS--GSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 592 VGDG~ND~~aL~~AdVG-Ia~g~~--g~~~a~~~ADivl~~~~l~~I~~~ 638 (1007)
|||..+|+.+.++|++- +.+... ..+.....+|+++ +++..|+++
T Consensus 172 VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 172 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred EECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHH
T ss_conf 804837699999869979998179987643368999998--999999854
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.96 E-value=0.02 Score=32.67 Aligned_cols=117 Identities=14% Similarity=0.149 Sum_probs=69.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCH---------------HHHHHHHHHHCCCCCEEEECC----------------
Q ss_conf 4311199999999978991999918999---------------999999999199965198316----------------
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNALNVVHSEL---------------- 571 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~---------------~ta~~ia~~lGi~~~~v~a~~---------------- 571 (1007)
.+.|++.+++++|+++|++++++|.... .......+..|+....++...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 76344899999998629757986165432144542434444336777776641355325887424644566421236640
Q ss_pred ---CHHHHHHHHHHHHHCC-EEEEECCCCCCHHHHHHCCE-EEEECCCCCHHHHHHCCEEEE-CCCCCHHHHHHHHH
Q ss_conf ---9867999999975389-09999199469998761993-199289996878850499991-69936199999999
Q 001837 572 ---LPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADI-GISMGISGSALATETGQVILM-SNDIRKVPEAIRLA 642 (1007)
Q Consensus 572 ---~Pe~K~~iI~~lq~~g-~VamVGDG~ND~~aL~~AdV-GIa~g~~g~~~a~~~ADivl~-~~~l~~I~~~I~~g 642 (1007)
.|+--..+++.+.-.. .+.||||..+|..+-+.|++ +|.+. .+.... ..+..+. -.++..+.+++...
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g~~~~--~~~~~~~~~~~~~e~~dll~~v 201 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV-DGEAAV--QPGFAIRPLRDSSELGDLLAAI 201 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE-TCCCEE--ETTEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEE-CCCCCC--CCCCCCCCCCCHHHHHHHHHHH
T ss_conf 2432015667677738994126895797889999998799489994-899765--6775546763052787999999
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.86 E-value=0.051 Score=29.39 Aligned_cols=66 Identities=26% Similarity=0.469 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHC-C--EEEEECCCCCCHHHHHHC----CEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 6799999997538-9--099991994699987619----931992899968788504999916993619999999
Q 001837 574 EDKAKIINQFKQE-G--KTAMIGDGINDAPALATA----DIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 574 e~K~~iI~~lq~~-g--~VamVGDG~ND~~aL~~A----dVGIa~g~~g~~~a~~~ADivl~~~~l~~I~~~I~~ 641 (1007)
..|..+++..-.. + ..++|||++.|..+|+.+ ++.|++ +|.+.+...|++.+.+++...+..++.+
T Consensus 184 g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsF--NGN~Yal~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 184 GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEE--CCCCCCCCCCCEEEECCCHHHHHHHHHH
T ss_conf 516789986336126986412367533278999974479836885--6862444534468966633578899999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.84 E-value=0.028 Score=31.48 Aligned_cols=227 Identities=15% Similarity=0.148 Sum_probs=107.0
Q ss_pred HHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 43047439974276541029349999623887789899999999421-------02999489999998361799999877
Q 001837 383 QTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIE-------SKSSHPMSAALVEYGRSLSIEPKPED 455 (1007)
Q Consensus 383 E~Lg~Vd~I~fDKTGTLT~~~m~v~~i~~~~~~~~~~~lL~~aa~~e-------~~s~hPi~~AI~~~a~~~g~~~~~~~ 455 (1007)
+-|.+++.++||.-|||-.+.-. .+ ...+.++.+.... ..+..+. ..+.......|++.....
T Consensus 2 ~~~~~ik~vlFDlDGTL~~~~~~------i~---~a~e~l~~l~~~g~~~~~~TN~~~~~~-~~~~~~~~~~g~~~~~~~ 71 (261)
T d1vjra_ 2 HVLDKIELFILDMDGTFYLDDSL------LP---GSLEFLETLKEKNKRFVFFTNNSSLGA-QDYVRKLRNMGVDVPDDA 71 (261)
T ss_dssp CGGGGCCEEEECCBTTTEETTEE------CT---THHHHHHHHHHTTCEEEEEESCTTSCH-HHHHHHHHHTTCCCCGGG
T ss_pred CHHHHCCEEEEECCCEEEECCCC------CC---HHHHHHHHHHHCCCCEEEEECCCCCCH-HHHHHHHHHHCCCCCCCE
T ss_conf 61774999999598856879916------83---199999999976998899958999998-999999985235665010
Q ss_pred CCC-CEECCCCCEE-EEECCEEEEEECHHHHH---HHCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCHHH
Q ss_conf 555-1000598239-99988999970488899---809999888679677997299998799799999942743111999
Q 001837 456 VED-YQNFPGEGIY-GKIGGEEIYIGNRKIAQ---RAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAE 530 (1007)
Q Consensus 456 v~~-~~~~~g~Gi~-~~i~g~~i~ig~~~~~~---~~~~~~~~~~~~~~~~g~~vi~va~d~~~lGli~l~D~lR~~a~~ 530 (1007)
+-. .... ...+. .......+..+...+.. ..+.. .. .+.. ...+++...........
T Consensus 72 v~ts~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~----------~~~~~~~~~~~~~~~~~ 133 (261)
T d1vjra_ 72 VVTSGEIT-AEHMLKRFGRCRIFLLGTPQLKKVFEAYGHV-ID------EENP----------DFVVLGFDKTLTYERLK 133 (261)
T ss_dssp EEEHHHHH-HHHHHHHHCSCEEEEESCHHHHHHHHHTTCE-EC------SSSC----------SEEEECCCTTCCHHHHH
T ss_pred ECCHHHHH-HHHHHHHCCCCEEEEECCCCHHHHHHHCCCC-CC------HHHC----------CEEEECCCCCCCHHHHH
T ss_conf 34589999-9999986379638983564305788861950-25------0101----------20574577653468899
Q ss_pred HHHHHHHCCCEEEEECCC------------CHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC-EEEEECCCC-
Q ss_conf 999999789919999189------------999999999991999651983169867999999975389-099991994-
Q 001837 531 AVNQLKSLGIRTAMLTGD------------NQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGI- 596 (1007)
Q Consensus 531 aI~~Lk~~GI~v~ilTGD------------~~~ta~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~g-~VamVGDG~- 596 (1007)
....+...+.......-| .......+....|......+....|.--..+.+.+.-.. .++||||..
T Consensus 134 ~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~ 213 (261)
T d1vjra_ 134 KACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLY 213 (261)
T ss_dssp HHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred HHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCEECCCHH
T ss_conf 99887503740122467754557887141452066777653132121366799578888887664047221103168716
Q ss_pred CCHHHHHHCCE-EEEECCCCC---HHHHH---HCCEEEECCCCCHHHHHHH
Q ss_conf 69998761993-199289996---87885---0499991699361999999
Q 001837 597 NDAPALATADI-GISMGISGS---ALATE---TGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 597 ND~~aL~~AdV-GIa~g~~g~---~~a~~---~ADivl~~~~l~~I~~~I~ 640 (1007)
+|+.+.++|++ +|.+. .|. +.... ..|+++ +++..|.++++
T Consensus 214 ~DI~ga~~aG~~si~V~-~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 214 TDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp HHHHHHHHHTCEEEEES-SSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred HHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCCEEE--CCHHHHHHHHC
T ss_conf 78999998799699989-89998778863689998998--89999999769
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.037 Score=30.53 Aligned_cols=79 Identities=18% Similarity=0.177 Sum_probs=47.3
Q ss_pred HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC-EEEEECCCCC-CHHHHHHCCE-EEEECCCC--CHHHHH----HCC
Q ss_conf 9999991999651983169867999999975389-0999919946-9998761993-19928999--687885----049
Q 001837 554 MQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGIN-DAPALATADI-GISMGISG--SALATE----TGQ 624 (1007)
Q Consensus 554 ~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~g-~VamVGDG~N-D~~aL~~AdV-GIa~g~~g--~~~a~~----~AD 624 (1007)
..+....+.. ........|+--..+.+.+.-.. .++||||+.+ |+.+.++|++ +|.+. .| .....+ .+|
T Consensus 161 ~~~~~~~~~~-~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~-~G~~~~~~l~~~~~~pd 238 (250)
T d2c4na1 161 AGIEKISGRK-PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL-SGVSSLDDIDSMPFRPS 238 (250)
T ss_dssp HHHHHHHCCC-CEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEES-SSSCCGGGGSSCSSCCS
T ss_pred HHHHHHHCCC-CHHCCCCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCC
T ss_conf 8998750210-000134204667666666327803457846872779999998799899989-99999889973789999
Q ss_pred EEEECCCCCHHH
Q ss_conf 999169936199
Q 001837 625 VILMSNDIRKVP 636 (1007)
Q Consensus 625 ivl~~~~l~~I~ 636 (1007)
+++ +++..|+
T Consensus 239 ~i~--~sl~eL~ 248 (250)
T d2c4na1 239 WIY--PSVAEID 248 (250)
T ss_dssp EEE--SSGGGCC
T ss_pred EEE--CCHHHHC
T ss_conf 998--9978937
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.63 E-value=0.00066 Score=44.49 Aligned_cols=48 Identities=21% Similarity=0.348 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHCC--EEEEECC----CCCCHHHHHHCC-EEEEECCCCCHHHHHHCC
Q ss_conf 7999999975389--0999919----946999876199-319928999687885049
Q 001837 575 DKAKIINQFKQEG--KTAMIGD----GINDAPALATAD-IGISMGISGSALATETGQ 624 (1007)
Q Consensus 575 ~K~~iI~~lq~~g--~VamVGD----G~ND~~aL~~Ad-VGIa~g~~g~~~a~~~AD 624 (1007)
.|...++.|.... .++++|| |.||.+||+.|+ .|++++ +.+.+++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~--~~~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT--APEDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS--SHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEEC--CHHHHHHHHH
T ss_conf 789999998489936299986899999976999971597299907--9999999999
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.35 E-value=0.026 Score=31.70 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=62.0
Q ss_pred HHHHHHHHHCCCEEEEECCCC-------------HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC-EEEEECC
Q ss_conf 999999997899199991899-------------99999999991999651983169867999999975389-0999919
Q 001837 529 AEAVNQLKSLGIRTAMLTGDN-------------QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGD 594 (1007)
Q Consensus 529 ~~aI~~Lk~~GI~v~ilTGD~-------------~~ta~~ia~~lGi~~~~v~a~~~Pe~K~~iI~~lq~~g-~VamVGD 594 (1007)
...+..+...+-...++|... ......+....|.. ...+....|+--..+.+.+.-.. .++||||
T Consensus 127 ~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gKP~p~~~~~al~~l~i~~~~~~mIGD 205 (253)
T d1wvia_ 127 KLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVK-PIIIGKPEAVIMNKALDRLGVKRHEAIMVGD 205 (253)
T ss_dssp HHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCC-CEECSTTSHHHHHHHHHHHTSCGGGEEEEES
T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCE-EEEECCCCCCCCEEHHHHCCCCCCCEEEECC
T ss_conf 887776666522551167999634768863046773210123333330-4784167742001100110345451699827
Q ss_pred CCC-CHHHHHHCCE-EEEECCCC---CHHHHHH---CCEEEECCCCCHH
Q ss_conf 946-9998761993-19928999---6878850---4999916993619
Q 001837 595 GIN-DAPALATADI-GISMGISG---SALATET---GQVILMSNDIRKV 635 (1007)
Q Consensus 595 G~N-D~~aL~~AdV-GIa~g~~g---~~~a~~~---ADivl~~~~l~~I 635 (1007)
..+ |+.+.++|++ +|.+. .| .+..... .|+++ +++..+
T Consensus 206 s~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi--~sl~e~ 251 (253)
T d1wvia_ 206 NYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVL--SSLAEW 251 (253)
T ss_dssp CTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEE--SCGGGC
T ss_pred CHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCCEEE--CCHHHC
T ss_conf 80777999998799799989-89999788863689998898--997770
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.83 E-value=0.087 Score=27.56 Aligned_cols=112 Identities=13% Similarity=0.199 Sum_probs=76.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC---EEEE-C------CCH--HHHHHHHHHHHHCC-EE
Q ss_conf 4311199999999978991999918999999999999199965---1983-1------698--67999999975389-09
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHS-E------LLP--EDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~---~v~a-~------~~P--e~K~~iI~~lq~~g-~V 589 (1007)
.+.+++.+.+++|+ .+..++|+.....+..+.+++|+... .+++ + ..| +.-....+.+.-.. .+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~ 161 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 161 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
T ss_conf 11345788765103---232256412045555543023444332100012321124434458899987787508987328
Q ss_pred EEECCCCCCHHHHHHCCEE-EEECCCCC--------HHHHHHCCEEEECCCCCHHHHHHH
Q ss_conf 9991994699987619931-99289996--------878850499991699361999999
Q 001837 590 AMIGDGINDAPALATADIG-ISMGISGS--------ALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 590 amVGDG~ND~~aL~~AdVG-Ia~g~~g~--------~~a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
+||||..+|+.+-+.+++- |.+. .+. ......+|+++ +++..++.++.
T Consensus 162 l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 162 VVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCEEEEEC-CCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 997587878999998499899983-6987875317789767999999--99999999999
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.78 E-value=0.11 Score=26.87 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=68.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEE-------CCCHHHHHHHHHHHHHCC-EEE
Q ss_conf 274311199999999978991999918999999999999199965--1983-------169867999999975389-099
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-------ELLPEDKAKIINQFKQEG-KTA 590 (1007)
Q Consensus 521 ~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a-------~~~Pe~K~~iI~~lq~~g-~Va 590 (1007)
..++-|++.+.++.|++.|+++.++|+... +....+..|+... .+.. ...|+--..+.+.+.-.. .++
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf 220258740102212224442489963231--357887635664333111111111123575888888987398874079
Q ss_pred EECCCCCCHHHHHHCCE-EEEECCCCCHHHHHHCCEEE
Q ss_conf 99199469998761993-19928999687885049999
Q 001837 591 MIGDGINDAPALATADI-GISMGISGSALATETGQVIL 627 (1007)
Q Consensus 591 mVGDG~ND~~aL~~AdV-GIa~g~~g~~~a~~~ADivl 627 (1007)
||||..+|+.+.+.|++ .|.++ . ......++.++
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~ 201 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIV 201 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEE
T ss_pred EEECCHHHHHHHHHCCCEEEEEC-C--HHHCCCCCEEC
T ss_conf 99669888999998699899999-8--11246564775
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.47 E-value=0.033 Score=30.92 Aligned_cols=91 Identities=11% Similarity=0.058 Sum_probs=61.7
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHH------H-HCCCCCEEEEC------CCHHHHHHHHHHH
Q ss_conf 274311199999999978991999918999999----99999------9-19996519831------6986799999997
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA----MQAQE------Q-LGNALNVVHSE------LLPEDKAKIINQF 583 (1007)
Q Consensus 521 ~D~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta----~~ia~------~-lGi~~~~v~a~------~~Pe~K~~iI~~l 583 (1007)
.+.+.|++.+.++.|++.|.+++++|+.+.... ..+.. . .+......+.+ ..+.-|..+...+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 08448789999999984448089992685788999999999975013335798679863255556677048789999973
Q ss_pred HHCC--EEEEECCCCCCHHHHHHCCEE-EEE
Q ss_conf 5389--099991994699987619931-992
Q 001837 584 KQEG--KTAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 584 q~~g--~VamVGDG~ND~~aL~~AdVG-Ia~ 611 (1007)
...+ .++|+||...|+.|.+++++- |.+
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V 144 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 144 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHCCCCEEEE
T ss_conf 2577755999869789999999879968971
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.21 E-value=0.14 Score=25.94 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEC-C----CH--HHHHHHHHHHHHCC-EEEEE
Q ss_conf 4311199999999978991999918999999999999199965--19831-6----98--67999999975389-09999
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-L----LP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta~~ia~~lGi~~~--~v~a~-~----~P--e~K~~iI~~lq~~g-~VamV 592 (1007)
++.+++.+++++|+ ++.+.++|+.+...+..+.+..|+... .++.. - .| +-=..+++.+.-.. .++||
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~V 170 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCHHHHHHHHHHH--HHCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEE
T ss_conf 63102367888875--3012677415247788887530222222222322222346863899999999919784338999
Q ss_pred CCCCCCHHHHHHCCEE-EEECCCCCHH-------------------------HHHHCCEEEECCCCCHHHHHHH
Q ss_conf 1994699987619931-9928999687-------------------------8850499991699361999999
Q 001837 593 GDGINDAPALATADIG-ISMGISGSAL-------------------------ATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 593 GDG~ND~~aL~~AdVG-Ia~g~~g~~~-------------------------a~~~ADivl~~~~l~~I~~~I~ 640 (1007)
||..+|+.+-++|++. |.+...+.+. .....|+++ +++..++.+|+
T Consensus 171 gD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (245)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred ECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE--CCHHHHHHHHH
T ss_conf 3899999999986992999847886542212244434540121100003554258999998--99999999998
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.14 E-value=0.019 Score=32.84 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=62.6
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHHCCCCC----EEEECCCH--HHHHHHHHHHHHCCEEEEEC
Q ss_conf 31119999999997899199991899----9999999999199965----19831698--67999999975389099991
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDN----QSAAMQAQEQLGNALN----VVHSELLP--EDKAKIINQFKQEGKTAMIG 593 (1007)
Q Consensus 524 lR~~a~~aI~~Lk~~GI~v~ilTGD~----~~ta~~ia~~lGi~~~----~v~a~~~P--e~K~~iI~~lq~~g~VamVG 593 (1007)
+.|++.+.++.+++.|++++.+||+. ..++..+.+.+|+... .++.+-.+ ..|...|+ +.+.++++|
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik---~y~I~l~~G 163 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQ---DKNIRIFYG 163 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHH---HTTEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHH---HCCEEEEEC
T ss_conf 66249999999997597499993884565799999999871987456663476179998237999999---749689965
Q ss_pred CCCCCHHHHHHCCE-EEEE
Q ss_conf 99469998761993-1992
Q 001837 594 DGINDAPALATADI-GISM 611 (1007)
Q Consensus 594 DG~ND~~aL~~AdV-GIa~ 611 (1007)
|..+|..+.++|++ +|-+
T Consensus 164 D~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 164 DSDNDITAARDVGARGIRI 182 (209)
T ss_dssp SSHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHHHHHCCCCCEEE
T ss_conf 9888876798759983575
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.29 E-value=0.041 Score=30.16 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC--------HHH-------HHHHHHHHCCCCCEEEE------------CCCHHH
Q ss_conf 431119999999997899199991899--------999-------99999991999651983------------169867
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDN--------QSA-------AMQAQEQLGNALNVVHS------------ELLPED 575 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~--------~~t-------a~~ia~~lGi~~~~v~a------------~~~Pe~ 575 (1007)
.+-|++.++++.|++.|++++++|... ... ........|+....+|. ...|+-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~ 109 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 109 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGG
T ss_pred EECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
T ss_conf 68755999999998738730110464300367777877654543000100123333310664143134542333642189
Q ss_pred HHHHHHHHHHCC-EEEEECCCCCCHHHHHHCCEE-EEEC
Q ss_conf 999999975389-099991994699987619931-9928
Q 001837 576 KAKIINQFKQEG-KTAMIGDGINDAPALATADIG-ISMG 612 (1007)
Q Consensus 576 K~~iI~~lq~~g-~VamVGDG~ND~~aL~~AdVG-Ia~g 612 (1007)
-..+++.+.-.. .+.||||...|..|-++|++. |.++
T Consensus 110 ~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 110 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred HHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCCEEEEEC
T ss_conf 999987619894048998998999999998699099989
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.04 E-value=0.28 Score=23.55 Aligned_cols=95 Identities=13% Similarity=0.109 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHHCCCC--CEEEEC-------CCHHHHHHHHHHHHHCC-E
Q ss_conf 43111999999999789919999189----9999999999919996--519831-------69867999999975389-0
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD----NQSAAMQAQEQLGNAL--NVVHSE-------LLPEDKAKIINQFKQEG-K 588 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD----~~~ta~~ia~~lGi~~--~~v~a~-------~~Pe~K~~iI~~lq~~g-~ 588 (1007)
.+.|++.+.++.|+++|+++.++|+. ............|+.. +.+++. ..|+--..+++.++-.. .
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~ 176 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE 176 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf 88800999999998659945775201111189999999874680755111000544137799827777888872898632
Q ss_pred EEEECCCCCCHHHHHHCCE-EEEECCCCCHH
Q ss_conf 9999199469998761993-19928999687
Q 001837 589 TAMIGDGINDAPALATADI-GISMGISGSAL 618 (1007)
Q Consensus 589 VamVGDG~ND~~aL~~AdV-GIa~g~~g~~~ 618 (1007)
++||||...|+.+-+.+++ +|-+. .+...
T Consensus 177 ~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 177 VVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp EEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred EEEEECCHHHHHHHHHCCCEEEEEC-CCCHH
T ss_conf 8999779887999998599899989-94048
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.74 E-value=0.14 Score=26.01 Aligned_cols=90 Identities=14% Similarity=0.076 Sum_probs=59.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHHHHCCC--CCEEEEC-------CCHHHHHHHHHHHHHCC-E
Q ss_conf 4311199999999978991999918999999----9999991999--6519831-------69867999999975389-0
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA----MQAQEQLGNA--LNVVHSE-------LLPEDKAKIINQFKQEG-K 588 (1007)
Q Consensus 523 ~lR~~a~~aI~~Lk~~GI~v~ilTGD~~~ta----~~ia~~lGi~--~~~v~a~-------~~Pe~K~~iI~~lq~~g-~ 588 (1007)
.+.+++.+.+..|++.|++++++|+...... .......++. .+.+++. ..|+--..+++.+.-.. .
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e 178 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 78801999999998634863345434124089999987652573866638995122334304778888776301568651
Q ss_pred EEEECCCCCCHHHHHHCCE-EEEEC
Q ss_conf 9999199469998761993-19928
Q 001837 589 TAMIGDGINDAPALATADI-GISMG 612 (1007)
Q Consensus 589 VamVGDG~ND~~aL~~AdV-GIa~g 612 (1007)
++||||...|+.+.+++++ +|.+.
T Consensus 179 ~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 179 VVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECS
T ss_pred EEEEECCHHHHHHHHHCCCEEEEEC
T ss_conf 0588168887999998699899989
|