Citrus Sinensis ID: 001842

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------101

MRSILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQSFSPTSYEGNKGLYGPPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

ccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEcccccEEEEEcccccccccccccccccccccccEEcccccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccccccccHHHHHHccccccEEEcccccccccccccHHHHcccccccEEEcccccccccccccccccccccEEEccccccccccccHHccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccccccccccccEEEccccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccEEcccccccccccccEEEccccEEEEEcccccccccccccEEEcccccccccccccccccccccccccccccEEEcccccccccccHHHHHccccccEEEcccccccccccccccccccEEEccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccHHHHHcccccccEEEccccccEEEccccccccccccEEEccccccEEcccHHHHccccccEEEcccccccccccHHHHccccccEEEccccccEEEccccccccccccccEEEcccccccccccHHHHHHHHHHHHccccccccccEEEccccccEEEEEEEEEEEEccEEEEHHHHccccEEEEcccccccccccHHHHccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHccccHHHHHHHHcEEEEEEEEc

ccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEccccEEEEEEccccccccccccccHHHcHHHHHHEcccccccccccccHHHcccccccEEEcccccccccccHHHHccccEEEEEccccccccccccccccHHHHHHHHHcccEEEcccccccccccHHHHHHHcccccEEEEcccccccccccccHccccccEEEEEcccccccccccHHHHcccccEEEEEccccccccccHHHccccccEEEEEcccccccccccccccccccEEEEEccccccccccHHHHHHHcccEEEcccccccccccHHHHcccccEEEEccccccccccccccccccccEEEEccccccccccHHHHccccccEEEEcccccccccccHHHccccccEEEEcccccccccccHHHHHHcccccEEEcccccccccccHHHHcccccccEEEEcccccccccccccccccccHHcccccccEEEcccccccccccHHHHHHccHccEEEccccccccccccccccccEEEEcccccccccccccccccEEEEcccccccccccccccccccEEEEEEccccccccccHHHccccccEEEEcccccccccccHHHHHcccccEEEEEcccccccccccccccccccEEEEEcccccccccccHHHHHccccEEEEcccccccccccHHHHcccccEEEEEEcccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEcccccHHHHHHcEEEEEEcccccccccccHHHHHHHHHHEEEccccccccccccHHcccccccEEEccccccEEcccHHHHHcccccEEEccccEEEEEccccccHHHccHHHcccccEEEcccccccccccccccccccccccccccHHHEHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHEEEEc

MRSILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKnsfilskdsitstklsqwsshhssdccdwngvdcdeaghvigldlsrepiigglenatglfSLQYLRSLNLgftlfsgiqipsrlanltnltylnlsqsgfiqdipieisSLTRLVtldlsaepsggfsfLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKalsflpnlqvlslsrcelsgPINQYLANLRslsairlpnnyglsspvpeflanfshltaldlgdcqlqgkfpekilqvptletldlsdnpslqgslphfpknsslrnLILFgtgfsgtlpnsignlenlanvdisscnftgpiptsmanltrlfhldfssnhfsgpipslglsrnlsyldlssndltgrilftpWEQLLNIKYVHLNYnslsgsiprslfllPTLEMLLLSTNQfenqlpefsnessSVMNFLDlsgnrlegpipiSIFFELRNLltldlssnkfsrlklasskprgtpnlnkqsklssldlsdnqisgeipnWIWEFSANLVFLNLSHNLLeslqepyfiagvglldlhsnelqgsipymspntsymdysnnnfttipadignfmsGTIFFSAannsltgvipqsvcnaTYFSVLDlsnnslsgtiptclitnssrtlgvlnlrgnslngtlsdrvpgicglqildlngnqlegmvpkslancKMLQVldlgnnnfskkfpcwlknASSLQVLVLRSnnfsgniscprnnvswpLLQIIDLASNKFSGRLSKKWLLTLEKMMNAEtksgselkhlqygfmggyqFYQVTVTVTVKSVEILVRKVSNIFtsidfssnnfegpipeeMGRFKSLYALNLsqnvltgsipssfgnleQIESLDLsmnnlsgkipaplanlNFLSVLNLSYNnlvgkiptstqlqsfsptsyegnkglygppltndsqthspelqasppsassdeidSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

MRSILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKlasskprgtpnlnkqsklsslDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSniftsidfssnnfEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQSFSPTSYEGNKGLYGPPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

MRSILLLSWLFFMPFLANYFGILVTLVsgqcqsdqqslllqMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRlanltnltylnlSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGlsrnlsyldlssndlTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSlfllptlemlllSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNlnkqsklssldlsdnqISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQvtvtvtvKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLAnlnflsvlnlsynnlvGKIPTSTQLQSFSPTSYEGNKGLYGPPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

***ILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETL*******************SLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFE************VMNFLDLSGNRLEGPIPISIFFELRNLLTLDLS************************************SGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNA******ELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIP**********************************************IDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRF**

***ILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMM*********LKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQSFSPTSYEGNKGLYGP***************************FFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

MRSILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSI***************CCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQSFSPTSYEGNKGLYGPPLTND****************SDEIDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

*RSILLLSWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKD*ITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPSRLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELRELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQSFSPTSYEGNKGLYGPPLTNDS****************DEIDSFFVVMSIGFAVGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFAV

iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii

iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii

ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1007	2.2.26 [Sep-21-2011]
Q9C9H7		847	Receptor-like protein 12	no	no	0.717	0.853	0.334	2e-85
C0LGQ5		1249	LRR receptor-like serine/	no	no	0.824	0.664	0.307	2e-78
Q9FL28		1173	LRR receptor-like serine/	no	no	0.673	0.578	0.328	2e-67
Q9LYN8		1192	Leucine-rich repeat recep	no	no	0.694	0.586	0.314	5e-66
Q9FIZ3		1252	LRR receptor-like serine/	no	no	0.691	0.555	0.320	1e-62
Q9LVP0		1102	Probable leucine-rich rep	no	no	0.676	0.617	0.308	2e-58
O49318		1124	Probable leucine-rich rep	no	no	0.624	0.559	0.308	3e-56
Q9SHI2		1101	Leucine-rich repeat recep	no	no	0.632	0.578	0.303	8e-56
C0LGS2		1136	Probable LRR receptor-lik	no	no	0.678	0.601	0.286	4e-54
P93194		1109	Receptor-like protein kin	N/A	no	0.614	0.558	0.296	4e-49

>sp\|Q9C9H7\|RLP12_ARATH Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	Back alignment and function desciption

 Score =  318 bits (814), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 252/753 (33%), Positives = 375/753 (49%), Gaps = 30/753 (3%)

Query: 259  LANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKN-SSLRNLI 317
            L    +L  LDL +C L G+ P  +  +  L  ++L  N    G +P    N + LR+LI
Sbjct: 106  LFKLQYLRHLDLTNCNLYGEIPSSLGNLSHLTLVNLYFN-KFVGEIPASIGNLNQLRHLI 164

Query: 318  LFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIPS 377
            L     +G +P+S+GNL  L N+++ S    G IP S+ +L +L +L  +SN+  G IPS
Sbjct: 165  LANNVLTGEIPSSLGNLSRLVNLELFSNRLVGKIPDSIGDLKQLRNLSLASNNLIGEIPS 224

Query: 378  -LGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLLPTLEML 436
             LG   NL +L L+ N L G +       L+ ++ +    NSLSG+IP S   L  L + 
Sbjct: 225  SLGNLSNLVHLVLTHNQLVGEVP-ASIGNLIELRVMSFENNSLSGNIPISFANLTKLSIF 283

Query: 437  LLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRL 496
            +LS+N F +  P F       + + D+S N   GP P S+   + +L ++ L  N+F+  
Sbjct: 284  VLSSNNFTSTFP-FDMSIFHNLEYFDVSYNSFSGPFPKSLLL-IPSLESIYLQENQFT-- 339

Query: 497  KLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEP 556
                  P    N +  +KL  L L  N++ G IP  I     NL  L++SHN       P
Sbjct: 340  -----GPIEFANTSSSTKLQDLILGRNRLHGPIPESISRL-LNLEELDISHNNFTGAIPP 393

Query: 557  YFIAGVGLL--DLHSNELQGSIPYMSPNTSYMDYSNNNFTTIPADIGNFMSGTIFFSAAN 614
                 V LL  DL  N L+G +P      + M  S+N+F++   +     +        +
Sbjct: 394  TISKLVNLLHLDLSKNNLEGEVPACLWRLNTMVLSHNSFSSF-ENTSQEEALIEELDLNS 452

Query: 615  NSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDR 674
            NS  G IP  +C  +    LDLSNN  SG+IP+C I N S ++  LNL  N+ +GTL D 
Sbjct: 453  NSFQGPIPYMICKLSSLGFLDLSNNLFSGSIPSC-IRNFSGSIKELNLGDNNFSGTLPDI 511

Query: 675  VPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVL 734
                  L  LD++ NQLEG  PKSL NCK L+++++ +N     FP WL++  SL VL L
Sbjct: 512  FSKATELVSLDVSHNQLEGKFPKSLINCKALELVNVESNKIKDIFPSWLESLPSLHVLNL 571

Query: 735  RSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHL 794
            RSN F G +     ++ +  L+IID++ N FSG L   +    + M    T    E+   
Sbjct: 572  RSNKFYGPLYHRHASIGFQSLRIIDISHNNFSGTLPPYYFSNWKDM----TTLTEEMDQY 627

Query: 795  QYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYAL 854
               F      Y   + +  K V++   ++   F +IDFS N   G IPE +G  K L  L
Sbjct: 628  MTEFWRYADSYYHEMEMVNKGVDMSFERIRRDFRAIDFSGNKINGNIPESLGYLKELRVL 687

Query: 855  NLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIP 914
            NLS N  T  IP    NL ++E+LD+S N LSG+IP  LA L+FLS +N S+N L G +P
Sbjct: 688  NLSGNAFTSVIPRFLANLTKLETLDISRNKLSGQIPQDLAALSFLSYMNFSHNLLQGPVP 747

Query: 915  TSTQLQSFSPTSYEGNKGLYG-PPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFA 973
              TQ Q    +S+  N GLYG   +  D+   +P  Q  P   S  E + F  V +   A
Sbjct: 748  RGTQFQRQKCSSFLDNPGLYGLEDICRDTGALNPTSQL-PEDLSEAEENMFNWVAA---A 803

Query: 974  VGFGAAVSPLMFSVKVNKWYNDLIYKFIYRRFA 1006
            + +G  V   +  + +  +Y    +++   +F 
Sbjct: 804  IAYGPGV---LCGLVIGHFYTSHNHEWFTEKFG 833

Involved in the perception of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristems maintenance.
Arabidopsis thaliana (taxid: 3702)

>sp\|C0LGQ5\|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	Back alignment and function description

>sp\|Q9FL28\|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1	Back alignment and function description

>sp\|Q9LYN8\|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1	Back alignment and function description

>sp\|Q9FIZ3\|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2	Back alignment and function description

>sp\|Q9LVP0\|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1	Back alignment and function description

>sp\|O49318\|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1	Back alignment and function description

>sp\|Q9SHI2\|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2	Back alignment and function description

>sp\|C0LGS2\|Y4361_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1	Back alignment and function description

>sp\|P93194\|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1007
224139184		1032	predicted protein [Populus trichocarpa]	0.977	0.953	0.526	0.0
359481298		1070	PREDICTED: LRR receptor-like serine/thre	0.985	0.927	0.515	0.0
359481300		1054	PREDICTED: leucine-rich repeat receptor	0.960	0.917	0.510	0.0
359481304		1057	PREDICTED: LRR receptor-like serine/thre	0.960	0.914	0.504	0.0
359481296		1075	PREDICTED: receptor-like protein 12-like	0.983	0.920	0.509	0.0
214011438		1128	GbVe [Gossypium barbadense]	0.976	0.871	0.486	0.0
359481293		1197	PREDICTED: leucine-rich repeat receptor	0.969	0.815	0.510	0.0
237899605		1139	verticillium wilt disease resistance pro	0.977	0.863	0.482	0.0
237899607		1139	verticillium wilt disease resistance pro	0.977	0.863	0.481	0.0
237899609		1139	verticillium wilt disease resistance pro	0.977	0.863	0.481	0.0

>gi\|224139184\|ref\|XP_002323001.1\| predicted protein [Populus trichocarpa] gi\|222867631\|gb\|EEF04762.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  963 bits (2490), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/1040 (52%), Positives = 697/1040 (67%), Gaps = 56/1040 (5%)

Query: 8    SWLFFMPFLANYFGILVTLVSGQCQSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSS 67
            +WLF +PFL  +FG+ V LVSGQC+ DQQSLLLQ+KN+ +   D   S KL +W+S  + 
Sbjct: 2    TWLFLIPFLTIFFGVNVCLVSGQCRKDQQSLLLQLKNTLVF--DQSVSAKLVKWNS--TP 57

Query: 68   DCCDWNGVDCDE-AGHVIGLDLSREPIIGGLENATGLFSLQYLRSLNLGFTLFSGIQIPS 126
            DCCDW G+ CDE +G VI LDLS E I GGL +++GL+ LQ+L+SLNL F  FS   +P 
Sbjct: 58   DCCDWPGITCDEGSGRVISLDLSSERITGGLGDSSGLYRLQFLQSLNLSFNSFS-TALPV 116

Query: 127  RLANLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAE--PSGGFSFLEISNLSLFLQ 184
              ANLT+L  LNLS +GF   IP + S LT+LV+LDLSA   P      LE  N +  +Q
Sbjct: 117  GFANLTDLISLNLSNAGFTGQIPNDFSKLTKLVSLDLSALSFPGSPALKLEQPNFATLVQ 176

Query: 185  NLTELRELHLDNVDLFASGTDWCKALSF-LPNLQVLSLSRCELSGPINQYLANLRSLSAI 243
            NLT L EL LD V++ A G DWCKALS  LPNL+VLS+S C LSGP++  LA L+SLS I
Sbjct: 177  NLTHLTELLLDGVNISAHGNDWCKALSSSLPNLKVLSMSNCYLSGPLDASLAKLQSLSII 236

Query: 244  RLPNNYGLSSPVPEFLANFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGS 303
            RL  N  LS+PVPEFLAN+S LTAL L  CQL G FP+ I QVPTLE LDL  N  LQGS
Sbjct: 237  RLSGN-NLSTPVPEFLANYSKLTALQLSSCQLNGIFPQAIFQVPTLEILDLQYNKFLQGS 295

Query: 304  LPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFH 363
             P F +N SLR L+L  T FSGTLP SIG L+ L+ ++++  NFTGPIP SMANLT+LF+
Sbjct: 296  FPEFHQNLSLRTLLLSNTNFSGTLPQSIGELQKLSRIELAGNNFTGPIPNSMANLTQLFY 355

Query: 364  LDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSI 423
            LD  SN F+G +PS   S+NL+Y+D+S N L G I    WE L ++ YV L YN+ +GSI
Sbjct: 356  LDLLSNKFTGTLPSFRKSKNLTYVDVSHNQLKGEIPSGHWEGLRSLTYVDLGYNAFNGSI 415

Query: 424  PRSLFLLPTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFF----- 478
            P SLF +P+L+ + LS N+F  Q+PEF N SSS+++ LDLS N+LEGPIP S+F      
Sbjct: 416  PSSLFAIPSLQKIQLSNNRFGGQIPEFPNVSSSLLDTLDLSSNKLEGPIPSSVFGLAKLN 475

Query: 479  -------------------ELRNLLTLDLSSN-----------------KFSRLKLASSK 502
                               +L NL TL LS N                 +  +L+LAS  
Sbjct: 476  VLELSSNMLNDTLQLHWIQKLPNLTTLGLSYNNLTVKSSGGNSNMSSLPQIKKLRLASCD 535

Query: 503  PRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGV 562
                P+L  QSKL  LDLSDNQI+G +P WI E    L +LNLS NLL  L+ P  + G+
Sbjct: 536  LGMFPDLRNQSKLFHLDLSDNQITGPVPGWISELIL-LQYLNLSRNLLVDLERPLSLPGL 594

Query: 563  GLLDLHSNELQGSIPYMSPNTSYMDYSNNNFTT-IPADIGNFMSGTIFFSAANNSLTGVI 621
             +LDLH N+LQGSIP      +Y+DYS+N F++ IP +IGN+ + T+FFS +NN LTG I
Sbjct: 595  SILDLHHNQLQGSIPVPPSYITYVDYSSNKFSSFIPPNIGNYFNFTLFFSLSNNHLTGEI 654

Query: 622  PQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPGICGL 681
            PQS+CN  +  VLDLSNNSLSG IP+CLI +  +TL VLNLR N+ +G + D+ P  C L
Sbjct: 655  PQSICNTEWLQVLDLSNNSLSGAIPSCLI-DKIKTLRVLNLRRNNFDGIIPDKFPRSCEL 713

Query: 682  QILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSG 741
            + LDL+GN L+G VPKSLANC ML+VLDLGNN  +  FPC LK+ SS +VLVLR+N FSG
Sbjct: 714  KTLDLSGNNLQGQVPKSLANCTMLEVLDLGNNQINDSFPCLLKSISSFRVLVLRNNMFSG 773

Query: 742  NISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGG 801
            +I CP+   +WP LQI+DLA N F G LS   L T E MM    +S   +++       G
Sbjct: 774  HIGCPQIEGTWPRLQIVDLAFNHFIGNLSDICLKTWEGMMEGGNRSLDHIRYDPLQLTNG 833

Query: 802  YQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLSQNVL 861
              +YQ ++TVTVK +E+ + K+  +FTS DFSSNNFEGPIP+ +G+F +LY LNLS NVL
Sbjct: 834  L-YYQDSITVTVKGLELELVKILTVFTSADFSSNNFEGPIPDAIGKFNALYVLNLSHNVL 892

Query: 862  TGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVGKIPTSTQLQS 921
            TG IPSS GNL Q+ESLDLS N LSG+IPA L +L FLSVLNLSYN LVG+IPT  Q  +
Sbjct: 893  TGQIPSSLGNLSQLESLDLSSNQLSGQIPAQLTSLTFLSVLNLSYNRLVGRIPTGNQFLT 952

Query: 922  FSPTSYEGNKGLYGPPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFAVGFGAAVS 981
            FS  S+EGN+GL GPPL   + +++ E  ++  S    E D  F+V  +GF +G G  V+
Sbjct: 953  FSSDSFEGNQGLCGPPL-KLACSNTNESNSTRGSNQRKEFDWQFIVPGLGFGLGSGIVVA 1011

Query: 982  PLMFSVKVNKWYNDLIYKFI 1001
            PL+FS K+NK Y+D I K +
Sbjct: 1012 PLLFSKKINKCYDDRIDKIL 1031

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359481298\|ref\|XP_003632604.1\| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359481300\|ref\|XP_002269481.2\| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359481304\|ref\|XP_002270356.2\| PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359481296\|ref\|XP_003632603.1\| PREDICTED: receptor-like protein 12-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|214011438\|gb\|ACJ61469.1\| GbVe [Gossypium barbadense]	Back alignment and taxonomy information

>gi\|359481293\|ref\|XP_003632602.1\| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|237899605\|gb\|ACR33107.1\| verticillium wilt disease resistance protein [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|237899607\|gb\|ACR33108.1\| verticillium wilt disease resistance protein [Solanum lycopersicum] gi\|237899611\|gb\|ACR33110.1\| verticillium wilt disease resistance protein [Solanum lycopersicum] gi\|237899613\|gb\|ACR33111.1\| verticillium wilt disease resistance protein [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|237899609\|gb\|ACR33109.1\| verticillium wilt disease resistance protein [Solanum lycopersicum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1007
TAIR\|locus:2078102		875	RLP33 "receptor like protein 3	0.416	0.478	0.358	8e-90
TAIR\|locus:2074633		943	RLP35 "AT3G11080" [Arabidopsis	0.417	0.445	0.340	6.3e-88
TAIR\|locus:2085537		894	RLP34 "AT3G11010" [Arabidopsis	0.414	0.466	0.348	1.1e-87
TAIR\|locus:2144392		957	RLP53 "receptor like protein 5	0.416	0.437	0.328	2.6e-86
TAIR\|locus:2205005		1019	RLP7 "AT1G47890" [Arabidopsis	0.803	0.793	0.317	6.2e-85
TAIR\|locus:2055772		983	RLP19 "receptor like protein 1	0.818	0.838	0.300	5.6e-84
TAIR\|locus:2046357		890	RLP23 "receptor like protein 2	0.730	0.826	0.315	1.2e-79
TAIR\|locus:2825384		847	RLP12 "AT1G71400" [Arabidopsis	0.712	0.846	0.308	1.8e-78
TAIR\|locus:2046600		800	RLP26 "receptor like protein 2	0.650	0.818	0.320	7.9e-78
TAIR\|locus:2046515		864	RLP24 "receptor like protein 2	0.785	0.915	0.311	1e-77

TAIR\|locus:2078102 RLP33 "receptor like protein 33" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 645 (232.1 bits), Expect = 8.0e-90, Sum P(2) = 8.0e-90
 Identities = 159/443 (35%), Positives = 235/443 (53%)

Query:   565 LDLHSNELQGSIP-YMSPNTSYMDYSNNNF------TTIPADIGNFMSGTIFFSAANNSL 617
             LD+ +N+++G +P ++     YM  SNNNF      T +   +    S   FF + NN+ 
Sbjct:   433 LDISNNKIKGQVPSWLLLQLEYMHISNNNFIGFERSTKLEKTVVPKPSMKHFFGS-NNNF 491

Query:   618 TGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTLSDRVPG 677
             +G IP  +C+     +LDLSNN+ SG IP C +     TL  LNLR N L+G+L   +  
Sbjct:   492 SGKIPSFICSLRSLIILDLSNNNFSGAIPPC-VGKFKSTLSDLNLRRNRLSGSLPKTI-- 548

Query:   678 ICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSN 737
             I  L+ LD++ N+LEG +P+SL +   L+VL++ +N  +  FP WL +   LQVLVLRSN
Sbjct:   549 IKSLRSLDVSHNELEGKLPRSLIHFSTLEVLNVESNRINDTFPFWLSSLKKLQVLVLRSN 608

Query:   738 NFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYG 797
              F G I   R    +P L+IID++ N F+G L     +    M + E K+         G
Sbjct:   609 AFHGRIHKTR----FPKLRIIDISRNHFNGTLPSDCFVEWTGMHSLE-KNEDRFNEKYMG 663

Query:   798 FMGGYQFYQXXXXXXXKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSLYALNLS 857
                GY  Y        K +E+ + ++  I+T++DFS N FEG IP  +G  K L+ LNLS
Sbjct:   664 --SGY--YHDSMVLMNKGLEMELVRILKIYTALDFSGNKFEGEIPRSIGLLKELHILNLS 719

Query:   858 QNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLAXXXXXXXXXXXXXXXXGKIPTST 917
              N  TG IPSS GNL ++ESLD+S N LSG+IP  L                 G++P  T
Sbjct:   720 SNGFTGHIPSSMGNLRELESLDVSRNKLSGEIPQELGNLSYLAYMNFSHNQLVGQVPGGT 779

Query:   918 QLQSFSPTSYEGNKGLYGPPLTNDSQTHSPELQASPPSASSDEIDSFFVVMSIGFAVGF- 976
             Q ++ S +S+E N GL G PL      H P       +  S+++ S+ +  +IGF  G  
Sbjct:   780 QFRTQSASSFEENLGLCGRPLEECRVVHEPTPSGESETLESEQVLSW-IAAAIGFTPGIV 838

Query:   977 -GAAVSPLMFSVKVNKWYNDLIY 998
              G  +  ++ S K  +W+  ++Y
Sbjct:   839 LGLTIGHIVLSSKP-RWFFKVLY 860

GO:0005886 "plasma membrane" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0007165 "signal transduction" evidence=IC

GO:0009507 "chloroplast" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006457 "protein folding" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR\|locus:2074633 RLP35 "AT3G11080" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2085537 RLP34 "AT3G11010" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2144392 RLP53 "receptor like protein 53" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2205005 RLP7 "AT1G47890" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2055772 RLP19 "receptor like protein 19" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046357 RLP23 "receptor like protein 23" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2825384 RLP12 "AT1G71400" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046600 RLP26 "receptor like protein 26" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046515 RLP24 "receptor like protein 24" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XVI.3792.1	hypothetical protein (1032 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1007
PLN00113		968	PLN00113, PLN00113, leucine-rich repeat receptor-l	6e-64
PLN00113		968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-50
PLN00113		968	PLN00113, PLN00113, leucine-rich repeat receptor-l	5e-33
PLN00113		968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-16
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	1e-14
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	7e-10
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	3e-09
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	1e-08
PLN03210		1153	PLN03210, PLN03210, Resistant to P	1e-08
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	2e-08
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	2e-08
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	1e-07
COG4886		394	COG4886, COG4886, Leucine-rich repeat (LRR) protei	2e-07
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	5e-07
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	9e-07
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	5e-06
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	5e-06
pfam13855		60	pfam13855, LRR_8, Leucine rich repeat	1e-05
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	2e-05
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	2e-05
pfam13855		60	pfam13855, LRR_8, Leucine rich repeat	3e-05
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	5e-05
PLN03210		1153	PLN03210, PLN03210, Resistant to P	1e-04
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	2e-04
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	3e-04
PRK15370		754	PRK15370, PRK15370, E3 ubiquitin-protein ligase Sl	9e-04
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	0.001
pfam13855		60	pfam13855, LRR_8, Leucine rich repeat	0.002
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	0.002
pfam08263		42	pfam08263, LRRNT_2, Leucine rich repeat N-terminal	0.003
cd00116		319	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo	0.004

>gnl\|CDD\|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

 Score =  233 bits (597), Expect = 6e-64
 Identities = 204/684 (29%), Positives = 307/684 (44%), Gaps = 150/684 (21%)

Query: 261 NFSHLTALDLGDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPH--FPKNSSLRNLIL 318
           N S + ++DL    + GK    I ++P ++T++LS+N  L G +P   F  +SSLR L L
Sbjct: 67  NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-QLSGPIPDDIFTTSSSLRYLNL 125

Query: 319 FGTGFSGTLPNSIGNLENLANVDISSCNFTGPIPTSMANLTRLFHLDFSSNHFSGPIP-S 377
               F+G++P   G++ NL  +D+S+   +G IP  + + + L  LD   N   G IP S
Sbjct: 126 SNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183

Query: 378 LGLSRNLSYLDLSSNDLTGRILFTPWE--QLLNIKYVHLNYNSLSGSIPRSLFLLPTLEM 435
           L    +L +L L+SN L G+I   P E  Q+ ++K+++L YN+LSG IP  +  L +L  
Sbjct: 184 LTNLTSLEFLTLASNQLVGQI---PRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSL-- 238

Query: 436 LLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSR 495
                                  N LDL  N L GPIP S    L+NL  L L  NK S 
Sbjct: 239 -----------------------NHLDLVYNNLTGPIPSS-LGNLKNLQYLFLYQNKLS- 273

Query: 496 LKLASSKPRGTPNLNKQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQE 555
                  P    +L    KL SLDLSDN +SGEIP  + +              L++L+ 
Sbjct: 274 ----GPIPPSIFSL---QKLISLDLSDNSLSGEIPELVIQ--------------LQNLE- 311

Query: 556 PYFIAGVGLLDLHSNELQGSIPYMS---PNTSYMDYSNNNFT-TIPADIGNFMSGTIFFS 611
                   +L L SN   G IP      P    +   +N F+  IP ++G   + T+   
Sbjct: 312 --------ILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVL-D 362

Query: 612 AANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGTL 671
            + N+LTG IP+ +C++     L L +NSL G IP  L    S                 
Sbjct: 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS----------------- 405

Query: 672 SDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQV 731
                    L+ + L  N   G +P       ++  LD+ NNN   +      +  SLQ+
Sbjct: 406 ---------LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456

Query: 732 LVLRSNNFSGNISCPRNNVSWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSEL 791
           L L  N F G +  P +  S   L+ +DL+ N+FSG + +K L +L ++M          
Sbjct: 457 LSLARNKFFGGL--PDSFGS-KRLENLDLSRNQFSGAVPRK-LGSLSELMQ--------- 503

Query: 792 KHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSIDFSSNNFEGPIPEEMGRFKSL 851
                                                 +  S N   G IP+E+   K L
Sbjct: 504 --------------------------------------LKLSENKLSGEIPDELSSCKKL 525

Query: 852 YALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLVG 911
            +L+LS N L+G IP+SF  +  +  LDLS N LSG+IP  L N+  L  +N+S+N+L G
Sbjct: 526 VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585

Query: 912 KIPTSTQLQSFSPTSYEGNKGLYG 935
            +P++    + + ++  GN  L G
Sbjct: 586 SLPSTGAFLAINASAVAGNIDLCG 609

Length = 968

>gnl\|CDD\|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215633 PLN03210, PLN03210, Resistant to P	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|206026 pfam13855, LRR_8, Leucine rich repeat	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>gnl\|CDD\|206026 pfam13855, LRR_8, Leucine rich repeat	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215633 PLN03210, PLN03210, Resistant to P	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|185268 PRK15370, PRK15370, E3 ubiquitin-protein ligase SlrP; Provisional	Back alignment and domain information

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>gnl\|CDD\|206026 pfam13855, LRR_8, Leucine rich repeat	Back alignment and domain information

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>gnl\|CDD\|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain	Back alignment and domain information

>gnl\|CDD\|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1007
PLN00113		968	leucine-rich repeat receptor-like protein kinase;	100.0
PLN00113		968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG4194		873	consensus Membrane glycoprotein LIG-1 [Signal tran	100.0
KOG0472		565	consensus Leucine-rich repeat protein [Function un	100.0
KOG4194		873	consensus Membrane glycoprotein LIG-1 [Signal tran	100.0
KOG0472		565	consensus Leucine-rich repeat protein [Function un	100.0
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	100.0
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	99.97
KOG0444		1255	consensus Cytoskeletal regulator Flightless-I (con	99.96
KOG0444		1255	consensus Cytoskeletal regulator Flightless-I (con	99.95
KOG4237		498	consensus Extracellular matrix protein slit, conta	99.91
PRK15387		788	E3 ubiquitin-protein ligase SspH2; Provisional	99.89
PRK15387		788	E3 ubiquitin-protein ligase SspH2; Provisional	99.89
KOG4237		498	consensus Extracellular matrix protein slit, conta	99.87
PLN03210		1153	Resistant to P. syringae 6; Provisional	99.87
PLN03210		1153	Resistant to P. syringae 6; Provisional	99.86
PRK15370		754	E3 ubiquitin-protein ligase SlrP; Provisional	99.83
PRK15370		754	E3 ubiquitin-protein ligase SlrP; Provisional	99.82
cd00116		319	LRR_RI Leucine-rich repeats (LRRs), ribonuclease i	99.7
PLN03150		623	hypothetical protein; Provisional	99.68
cd00116		319	LRR_RI Leucine-rich repeats (LRRs), ribonuclease i	99.68
KOG0617		264	consensus Ras suppressor protein (contains leucine	99.61
KOG0617		264	consensus Ras suppressor protein (contains leucine	99.6
PLN03150		623	hypothetical protein; Provisional	99.41
KOG0532		722	consensus Leucine-rich repeat (LRR) protein, conta	99.19
KOG0532		722	consensus Leucine-rich repeat (LRR) protein, conta	99.17
COG4886		394	Leucine-rich repeat (LRR) protein [Function unknow	99.12
KOG1909		382	consensus Ran GTPase-activating protein [RNA proce	99.09
KOG1909		382	consensus Ran GTPase-activating protein [RNA proce	99.07
COG4886		394	Leucine-rich repeat (LRR) protein [Function unknow	99.04
KOG3207		505	consensus Beta-tubulin folding cofactor E [Posttra	98.91
KOG3207		505	consensus Beta-tubulin folding cofactor E [Posttra	98.9
PF14580		175	LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ	98.89
KOG1259		490	consensus Nischarin, modulator of integrin alpha5	98.84
PF14580		175	LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ	98.84
KOG4658		889	consensus Apoptotic ATPase [Signal transduction me	98.83
KOG0531		414	consensus Protein phosphatase 1, regulatory subuni	98.8
PF08263		43	LRRNT_2: Leucine rich repeat N-terminal domain; In	98.8
PF13855		61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	98.76
PF13855		61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	98.74
KOG4658		889	consensus Apoptotic ATPase [Signal transduction me	98.74
KOG1259		490	consensus Nischarin, modulator of integrin alpha5	98.74
KOG0531		414	consensus Protein phosphatase 1, regulatory subuni	98.57
KOG2120		419	consensus SCF ubiquitin ligase, Skp2 component [Po	98.56
COG5238		388	RNA1 Ran GTPase-activating protein (RanGAP) involv	98.39
KOG2120		419	consensus SCF ubiquitin ligase, Skp2 component [Po	98.38
KOG2982		418	consensus Uncharacterized conserved protein [Funct	98.25
KOG4579		177	consensus Leucine-rich repeat (LRR) protein associ	98.23
KOG1859		1096	consensus Leucine-rich repeat proteins [General fu	98.16
KOG4341		483	consensus F-box protein containing LRR [General fu	98.13
KOG1859		1096	consensus Leucine-rich repeat proteins [General fu	98.02
KOG4579		177	consensus Leucine-rich repeat (LRR) protein associ	97.86
COG5238		388	RNA1 Ran GTPase-activating protein (RanGAP) involv	97.78
PF12799		44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	97.72
KOG2982		418	consensus Uncharacterized conserved protein [Funct	97.68
PRK15386		426	type III secretion protein GogB; Provisional	97.64
PF12799		44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	97.64
KOG4341		483	consensus F-box protein containing LRR [General fu	97.51
PRK15386		426	type III secretion protein GogB; Provisional	97.51
KOG3665		699	consensus ZYG-1-like serine/threonine protein kina	97.5
KOG3665		699	consensus ZYG-1-like serine/threonine protein kina	97.49
PF13306		129	LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_	97.4
KOG1644		233	consensus U2-associated snRNP A' protein [RNA proc	97.37
KOG1644		233	consensus U2-associated snRNP A' protein [RNA proc	97.04
KOG2739		260	consensus Leucine-rich acidic nuclear protein [Cel	96.93
KOG1947		482	consensus Leucine rich repeat proteins, some prote	96.75
PF13306		129	LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_	96.65
KOG2123		388	consensus Uncharacterized conserved protein [Funct	96.05
PF00560		22	LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le	96.02
KOG2739		260	consensus Leucine-rich acidic nuclear protein [Cel	95.91
PF00560		22	LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le	95.86
KOG2123		388	consensus Uncharacterized conserved protein [Funct	95.84
KOG1947		482	consensus Leucine rich repeat proteins, some prote	95.64
KOG4308		478	consensus LRR-containing protein [Function unknown	92.81
KOG4308		478	consensus LRR-containing protein [Function unknown	90.75
KOG0473		326	consensus Leucine-rich repeat protein [Function un	90.32
KOG3864		221	consensus Uncharacterized conserved protein [Funct	90.26
PF13504		17	LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OO	89.75
KOG3864		221	consensus Uncharacterized conserved protein [Funct	87.05
PF13516		24	LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RI	86.28
smart00369		26	LRR_TYP Leucine-rich repeats, typical (most popula	85.82
smart00370		26	LRR Leucine-rich repeats, outliers.	85.82
smart00370		26	LRR Leucine-rich repeats, outliers.	84.91
smart00369		26	LRR_TYP Leucine-rich repeats, typical (most popula	84.91
PF13516		24	LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RI	82.47

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

Probab=100.00  E-value=6.2e-71  Score=702.45  Aligned_cols=584  Identities=35%  Similarity=0.569  Sum_probs=390.5

Q ss_pred             CHHHHHHHHHhhhcCCCCCCCcCCCCCCCCCCCCCCCCccccceecCCCCCEEEEeCCCCCccccccCCCccccCCCCCe
Q 001842           32 QSDQQSLLLQMKNSFILSKDSITSTKLSQWSSHHSSDCCDWNGVDCDEAGHVIGLDLSREPIIGGLENATGLFSLQYLRS  111 (1007)
Q Consensus        32 ~~~~~~~ll~~k~~~~~~~~~~~~~~l~~W~~~~~~~~c~w~gv~c~~~~~v~~L~L~~~~l~g~~~~~~~l~~l~~L~~  111 (1007)
                      .++|++||++||+++. +|.    +.+++|  ..+.+||.|.||+|+..++|+.|||+++.+.|.+  ++.+..+++|++
T Consensus        27 ~~~~~~~l~~~~~~~~-~~~----~~~~~w--~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~--~~~~~~l~~L~~   97 (968)
T PLN00113         27 HAEELELLLSFKSSIN-DPL----KYLSNW--NSSADVCLWQGITCNNSSRVVSIDLSGKNISGKI--SSAIFRLPYIQT   97 (968)
T ss_pred             CHHHHHHHHHHHHhCC-CCc----ccCCCC--CCCCCCCcCcceecCCCCcEEEEEecCCCccccC--ChHHhCCCCCCE
Confidence            4589999999999995 454    568899  5678999999999997789999999999999877  678888888999


Q ss_pred             eeCCCCCCCCCCCCcccc-CCCCCCEEeCCCCCCCccCCccccCCCCCCEEeCCCCCCCCCccccccchHHhhccCCCCc
Q 001842          112 LNLGFTLFSGIQIPSRLA-NLTNLTYLNLSQSGFIQDIPIEISSLTRLVTLDLSAEPSGGFSFLEISNLSLFLQNLTELR  190 (1007)
Q Consensus       112 L~Ls~n~~~~~~lp~~l~-~l~~L~~L~Ls~n~~~~~lp~~l~~l~~L~~L~Ls~n~~~~l~~~~~~~~~~~l~~l~~L~  190 (1007)
                      |+|++|.+.+. +|..+. .+++|++|+|++|.+.+.+|.  +.+++|++|++++|                        
T Consensus        98 L~Ls~n~~~~~-ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n------------------------  150 (968)
T PLN00113         98 INLSNNQLSGP-IPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNN------------------------  150 (968)
T ss_pred             EECCCCccCCc-CChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCC------------------------
Confidence            99988888775 776654 888888888888887777663  33445555555443                        


Q ss_pred             eeecCCccccCccchhhHhhCCCCCCcEEEccCcCCCCcchhhhcCCCCCCEEECCCCCCCCCCchhhhcCCCCCCEEec
Q 001842          191 ELHLDNVDLFASGTDWCKALSFLPNLQVLSLSRCELSGPINQYLANLRSLSAIRLPNNYGLSSPVPEFLANFSHLTALDL  270 (1007)
Q Consensus       191 ~L~L~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~l~~l~~L~~L~L  270 (1007)
                                                        .+++.+|..++.+++|++|++++| .+.+.+|..++++++|++|++
T Consensus       151 ----------------------------------~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L  195 (968)
T PLN00113        151 ----------------------------------MLSGEIPNDIGSFSSLKVLDLGGN-VLVGKIPNSLTNLTSLEFLTL  195 (968)
T ss_pred             ----------------------------------cccccCChHHhcCCCCCEEECccC-cccccCChhhhhCcCCCeeec
Confidence                                              344444445555555555555555 455555555555666666666


Q ss_pred             cCCcCCcccchhccCCCCCCEEeCCCCCCCCCCCCCCCCCCCCcEEEecCCCCcccccccccCCCCCCEEEccCCcCCCC
Q 001842          271 GDCQLQGKFPEKILQVPTLETLDLSDNPSLQGSLPHFPKNSSLRNLILFGTGFSGTLPNSIGNLENLANVDISSCNFTGP  350 (1007)
Q Consensus       271 s~n~l~~~~p~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~  350 (1007)
                      ++|.+.+.+|..++++++|++|++++|                        .+.+.+|..++++++|++|++++|.+.+.
T Consensus       196 ~~n~l~~~~p~~l~~l~~L~~L~L~~n------------------------~l~~~~p~~l~~l~~L~~L~L~~n~l~~~  251 (968)
T PLN00113        196 ASNQLVGQIPRELGQMKSLKWIYLGYN------------------------NLSGEIPYEIGGLTSLNHLDLVYNNLTGP  251 (968)
T ss_pred             cCCCCcCcCChHHcCcCCccEEECcCC------------------------ccCCcCChhHhcCCCCCEEECcCceeccc
Confidence            666655555555555555555554443                        23344555555666666666666666655


Q ss_pred             CcccccCCCCCcEEEeccCcccCCCCCccCCCCCCEEEcccCCCCCccCCcccccCCCcCEEEccCCcCCCccCccccCC
Q 001842          351 IPTSMANLTRLFHLDFSSNHFSGPIPSLGLSRNLSYLDLSSNDLTGRILFTPWEQLLNIKYVHLNYNSLSGSIPRSLFLL  430 (1007)
Q Consensus       351 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l  430 (1007)
                      +|..++++++|++|++++|.+.+.+|                       .. +..+++|++|++++|.+.+.+|..+.++
T Consensus       252 ~p~~l~~l~~L~~L~L~~n~l~~~~p-----------------------~~-l~~l~~L~~L~Ls~n~l~~~~p~~~~~l  307 (968)
T PLN00113        252 IPSSLGNLKNLQYLFLYQNKLSGPIP-----------------------PS-IFSLQKLISLDLSDNSLSGEIPELVIQL  307 (968)
T ss_pred             cChhHhCCCCCCEEECcCCeeeccCc-----------------------hh-HhhccCcCEEECcCCeeccCCChhHcCC
Confidence            66666666655555555555443332                       22 4445555555555555555566666655


Q ss_pred             CcccccccCCCcccccCccccccCcCCccEEEccCCCCCCCCChhhhccCCCCcEEECCCCccccccccCCCCCCCCCCC
Q 001842          431 PTLEMLLLSTNQFENQLPEFSNESSSVMNFLDLSGNRLEGPIPISIFFELRNLLTLDLSSNKFSRLKLASSKPRGTPNLN  510 (1007)
Q Consensus       431 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~ls~n~l~~~i~~~~f~~l~~L~~L~L~~n~l~~l~~~~~~~~~~p~l~  510 (1007)
                      ++|+.|++++|.+.+                         .+|..+ ..+                              
T Consensus       308 ~~L~~L~l~~n~~~~-------------------------~~~~~~-~~l------------------------------  331 (968)
T PLN00113        308 QNLEILHLFSNNFTG-------------------------KIPVAL-TSL------------------------------  331 (968)
T ss_pred             CCCcEEECCCCccCC-------------------------cCChhH-hcC------------------------------
Confidence            656655555555443                         222221 222                              


Q ss_pred             CCCCccEEEcCCCccccchhhhHhhccccceEEeccCCcccCCCcccccccCCeEecccccccccCCCCCCCCCeEEecC
Q 001842          511 KQSKLSSLDLSDNQISGEIPNWIWEFSANLVFLNLSHNLLESLQEPYFIAGVGLLDLHSNELQGSIPYMSPNTSYMDYSN  590 (1007)
Q Consensus       511 ~l~~L~~L~Ls~n~l~~~ip~~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~l~~N~l~~~~~~~~~~L~~L~ls~  590 (1007)
                        ++|+.|++++|.+++.+|..+..                                                       
T Consensus       332 --~~L~~L~L~~n~l~~~~p~~l~~-------------------------------------------------------  354 (968)
T PLN00113        332 --PRLQVLQLWSNKFSGEIPKNLGK-------------------------------------------------------  354 (968)
T ss_pred             --CCCCEEECcCCCCcCcCChHHhC-------------------------------------------------------
Confidence              33444444444444344332211                                                       


Q ss_pred             CcCcCCCccccccCCCceEEEcccCcccccCCccccCCCCCCEEEccCCcccccCCcchhhcCcCccceEEccCCcCccc
Q 001842          591 NNFTTIPADIGNFMSGTIFFSAANNSLTGVIPQSVCNATYFSVLDLSNNSLSGTIPTCLITNSSRTLGVLNLRGNSLNGT  670 (1007)
Q Consensus       591 n~l~~i~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~Ls~N~l~~~  670 (1007)
                                   +++|+.|++++|++++.+|..++.+++|+.|++++|++.+.                          
T Consensus       355 -------------~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~--------------------------  395 (968)
T PLN00113        355 -------------HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE--------------------------  395 (968)
T ss_pred             -------------CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEeccc--------------------------
Confidence                         11222233333333333333444444455555555555444                          


Q ss_pred             cCCCcCCCCCccEEeccCCcccccccccccCCCCCcEEeCCCCcCCccchhhhhcCCCCcEEECCCccCccccCCCCCCC
Q 001842          671 LSDRVPGICGLQILDLNGNQLEGMVPKSLANCKMLQVLDLGNNNFSKKFPCWLKNASSLQVLVLRSNNFSGNISCPRNNV  750 (1007)
Q Consensus       671 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~  750 (1007)
                      +|..+..+++|+.|++++|++++.+|..|..++.|+.|++++|++++.+|..+..+++|+.|++++|++.+.+  |..+ 
T Consensus       396 ~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~--p~~~-  472 (968)
T PLN00113        396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL--PDSF-  472 (968)
T ss_pred             CCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeec--Cccc-
Confidence            4444555555555556666665555656666666666666666666666666666666666666666666554  4332 


Q ss_pred             CCCCCcEEECCCCcCcccCchHHHHhHHHhhhhccccccccccccccccCcceeeeeEEEEEecceeeeeeccccceEEE
Q 001842          751 SWPLLQIIDLASNKFSGRLSKKWLLTLEKMMNAETKSGSELKHLQYGFMGGYQFYQVTVTVTVKSVEILVRKVSNIFTSI  830 (1007)
Q Consensus       751 ~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  830 (1007)
                      ..++|+.||+++|+++|.+|..+.                                                .+..|+.|
T Consensus       473 ~~~~L~~L~ls~n~l~~~~~~~~~------------------------------------------------~l~~L~~L  504 (968)
T PLN00113        473 GSKRLENLDLSRNQFSGAVPRKLG------------------------------------------------SLSELMQL  504 (968)
T ss_pred             ccccceEEECcCCccCCccChhhh------------------------------------------------hhhccCEE
Confidence            346777888888888777774321                                                24457788


Q ss_pred             EcccccccCCCcccccCCCCCCEEeCCCCcccccCCcCccCCCCCCEEeCCCccccccCCccCcCCCCCCeEEccCCccc
Q 001842          831 DFSSNNFEGPIPEEMGRFKSLYALNLSQNVLTGSIPSSFGNLEQIESLDLSMNNLSGKIPAPLANLNFLSVLNLSYNNLV  910 (1007)
Q Consensus       831 dLs~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~l~ls~N~L~  910 (1007)
                      ||++|+++|.+|+.++++++|++|+|++|.++|.+|..|+++++|+.|||++|+++|.+|..++++++|+++++++|+++
T Consensus       505 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~  584 (968)
T PLN00113        505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH  584 (968)
T ss_pred             ECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCccCCCcccCCCCCCCCC
Q 001842          911 GKIPTSTQLQSFSPTSYEGNKGLYGPP  937 (1007)
Q Consensus       911 g~iP~~~~~~~~~~~~~~gn~~lcg~~  937 (1007)
                      |.||..++|.++.+.+|.||+++||.+
T Consensus       585 ~~~p~~~~~~~~~~~~~~~n~~lc~~~  611 (968)
T PLN00113        585 GSLPSTGAFLAINASAVAGNIDLCGGD  611 (968)
T ss_pred             eeCCCcchhcccChhhhcCCccccCCc
Confidence            999999999999999999999999864

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional	Back alignment and domain information

>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]	Back alignment and domain information

>KOG0472 consensus Leucine-rich repeat protein [Function unknown]	Back alignment and domain information

>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]	Back alignment and domain information

>KOG0472 consensus Leucine-rich repeat protein [Function unknown]	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]	Back alignment and domain information

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]	Back alignment and domain information

>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]	Back alignment and domain information

>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional	Back alignment and domain information

>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional	Back alignment and domain information

>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]	Back alignment and domain information

>PLN03210 Resistant to P	Back alignment and domain information

>PLN03210 Resistant to P	Back alignment and domain information

>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional	Back alignment and domain information

>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional	Back alignment and domain information

>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	Back alignment and domain information

>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]	Back alignment and domain information

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]	Back alignment and domain information

>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]	Back alignment and domain information

>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]	Back alignment and domain information

>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]	Back alignment and domain information

>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]	Back alignment and domain information

>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]	Back alignment and domain information

>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A	Back alignment and domain information

>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A	Back alignment and domain information

>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []	Back alignment and domain information

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A	Back alignment and domain information

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A	Back alignment and domain information

>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]	Back alignment and domain information

>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]	Back alignment and domain information

>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG2982 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]	Back alignment and domain information

>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]	Back alignment and domain information

>KOG4341 consensus F-box protein containing LRR [General function prediction only]	Back alignment and domain information

>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]	Back alignment and domain information

>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]	Back alignment and domain information

>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]	Back alignment and domain information

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B	Back alignment and domain information

>KOG2982 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK15386 type III secretion protein GogB; Provisional	Back alignment and domain information

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B	Back alignment and domain information

>KOG4341 consensus F-box protein containing LRR [General function prediction only]	Back alignment and domain information

>PRK15386 type III secretion protein GogB; Provisional	Back alignment and domain information

>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]	Back alignment and domain information

>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]	Back alignment and domain information

>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A	Back alignment and domain information

>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]	Back alignment and domain information

>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]	Back alignment and domain information

>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]	Back alignment and domain information

>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A	Back alignment and domain information

>KOG2123 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []	Back alignment and domain information

>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []	Back alignment and domain information

>KOG2123 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]	Back alignment and domain information

>KOG4308 consensus LRR-containing protein [Function unknown]	Back alignment and domain information

>KOG4308 consensus LRR-containing protein [Function unknown]	Back alignment and domain information

>KOG0473 consensus Leucine-rich repeat protein [Function unknown]	Back alignment and domain information

>KOG3864 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D	Back alignment and domain information

>KOG3864 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A	Back alignment and domain information

>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily	Back alignment and domain information

>smart00370 LRR Leucine-rich repeats, outliers	Back alignment and domain information

>smart00370 LRR Leucine-rich repeats, outliers	Back alignment and domain information

>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily	Back alignment and domain information

>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1007
3riz_A		772	Crystal Structure Of The Plant Steroid Receptor Bri		2e-29
3rgx_A		768	Structural Insight Into Brassinosteroid Perception		2e-29
1ogq_A		313	The Crystal Structure Of Pgip (Polygalacturonase In		8e-10
1ogq_A		313	The Crystal Structure Of Pgip (Polygalacturonase In		4e-07
1ogq_A		313	The Crystal Structure Of Pgip (Polygalacturonase In		1e-04
4fcg_A		328	Structure Of The Leucine-Rich Repeat Domain Of The		3e-04
3ul8_A		279	Crystal Structure Of The Tv3 Mutant V134l Length =		7e-04
2z63_A		570	Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A		8e-04
3ula_A		279	Crystal Structure Of The Tv3 Mutant F63w-Md-2-Erito		8e-04
4g8a_A		635	Crystal Structure Of Human Tlr4 Polymorphic Variant		9e-04
3ul7_A		278	Crystal Structure Of The Tv3 Mutant F63w Length = 2		9e-04
2z62_A		276	Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 A		9e-04

>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772