Citrus Sinensis ID: 001944
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 993 | 2.2.26 [Sep-21-2011] | |||||||
| Q9VR59 | 1696 | Inositol hexakisphosphate | no | no | 0.794 | 0.465 | 0.407 | 1e-174 | |
| Q5XHF8 | 1131 | Inositol hexakisphosphate | N/A | no | 0.789 | 0.693 | 0.412 | 1e-171 | |
| O43314 | 1243 | Inositol hexakisphosphate | yes | no | 0.786 | 0.628 | 0.416 | 1e-170 | |
| Q5REW0 | 1244 | Inositol hexakisphosphate | yes | no | 0.786 | 0.627 | 0.417 | 1e-170 | |
| Q6ZQB6 | 1129 | Inositol hexakisphosphate | yes | no | 0.789 | 0.694 | 0.417 | 1e-169 | |
| A7Z050 | 1477 | Inositol hexakisphosphate | no | no | 0.678 | 0.456 | 0.445 | 1e-160 | |
| Q6PFW1 | 1433 | Inositol hexakisphosphate | no | no | 0.674 | 0.467 | 0.440 | 1e-159 | |
| Q5RDF1 | 1409 | Inositol hexakisphosphate | yes | no | 0.676 | 0.476 | 0.440 | 1e-158 | |
| P0C644 | 1434 | Inositol hexakisphosphate | yes | no | 0.669 | 0.463 | 0.431 | 1e-158 | |
| P91309 | 1323 | Inositol hexakisphosphate | no | no | 0.800 | 0.600 | 0.374 | 1e-148 |
| >sp|Q9VR59|VIP1_DROME Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Drosophila melanogaster GN=l(1)G0196 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 613 bits (1580), Expect = e-174, Method: Compositional matrix adjust.
Identities = 379/930 (40%), Positives = 523/930 (56%), Gaps = 141/930 (15%)
Query: 13 WPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPR 72
WP CDCL++F+S G+PLEKA YA LR PF++N L Q+ + DRR+VY LEK GI +PR
Sbjct: 114 WPTCDCLVSFHSKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPR 173
Query: 73 YALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKE 132
YA+++R+ P + IE ED VEV+G F KPFVEKPV +DH+I IYYP+SAGGG +
Sbjct: 174 YAVLDRDSPDPKHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR 233
Query: 133 LFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG 192
LFRK+G+RSS + P+ RVR+ GS+IYE+FMPT GTDVKVYTVGP+YAHAEARKSP +DG
Sbjct: 234 LFRKIGSRSSVYSPE-SRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG 292
Query: 193 VVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVK 252
V R+ +GKE+RYPV+L +EK ++R+VC+AF+Q VCGFDLLR G+SYVCDVNG+SFVK
Sbjct: 293 KVERDSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVK 352
Query: 253 NSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEP-VQPTEGLTRQGSGLGTFGQ 311
NS KYYDD A +L M L P L IP +P+++++P + PT TFG+
Sbjct: 353 NSNKYYDDCAKILGNMILRELTPTLH--IPWSVPFQLDDPPIVPT-----------TFGK 399
Query: 312 SEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLD 371
ELRCV+AV+RHGDRTPKQK+K++V K + KY+G + KLK QLQ++LD
Sbjct: 400 MMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFEKYDGYK-LGHVKLKRPKQLQEILD 458
Query: 372 ATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKF------------FNVQ 419
R L+ ++ E ++ + + + + H G K +
Sbjct: 459 IARFLLSEIHTKAHAEIEEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSD 518
Query: 420 DVLLS----IQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWG------SHSEGTGL 469
D L+ ++ L+L G+ Q + + Y G S ++G GL
Sbjct: 519 DTNLAADQPVEPSLVLILKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGL 578
Query: 470 LRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLV--SKDSSMLDGLD 527
LRLHST+RHDLKIY+SDEGRVQM+AAAFAKGLL LEG+LTPILV +V + + +LD
Sbjct: 579 LRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDC 638
Query: 528 NASIEMEEAKARLNEII-------KSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLV 580
++S AK RL+E++ K ++I+ S D V P + + L+
Sbjct: 639 DSSKYQNLAKGRLHELMQNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLI 698
Query: 581 KLTKKVTEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGF 640
+ + + K +D L +D
Sbjct: 699 RELLHIISIKKDDPKTKDAILYHGETWD-------------------------------- 726
Query: 641 LLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAH-LNLEGLDELFKVAQLL 699
LM RW K+E+D ++ + + FDI++IPD+YD KYDL HN H L + +EL+ A+ L
Sbjct: 727 -LMRCRWEKIEKD-FSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAEELYIYAKNL 784
Query: 700 ADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTK 759
AD VIP EYG+ P++KL IG I LL K
Sbjct: 785 ADIVIPQEYGLTPQEKLAIGQGICSPLLRK------------------------------ 814
Query: 760 TEKEDKDYPPKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYAN-VKTPERHVR 818
IK D R ++D+ +D E RL+P Y++ V +P+RHVR
Sbjct: 815 -------------IKGDLQR--------NIDEVED---EFMNRLNPHYSHGVASPQRHVR 850
Query: 819 TRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFE 878
TRLYFTSESH+HSL+ VLRY L + E A++ + EL+YMS IV+ ++E
Sbjct: 851 TRLYFTSESHVHSLLTVLRYGGLLNVVTDEQ---WRRAMDYISMVSELNYMSQIVIMLYE 907
Query: 879 NTAVALEDPKRFRIELTFSRGADLSPLEKN 908
+ +RF +EL FS G + ++KN
Sbjct: 908 DPTKDPTSEERFHVELHFSPGVNCC-VQKN 936
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Drosophila melanogaster (taxid: 7227) EC: 2EC: .EC: 7EC: .EC: 4EC: .EC: 2EC: 4 |
| >sp|Q5XHF8|VIP2_XENLA Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Xenopus laevis GN=ppip5k2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|O43314|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q5REW0|VIP2_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Pongo abelii GN=PPIP5K2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q6ZQB6|VIP2_MOUSE Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Mus musculus GN=Ppip5k2 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|A7Z050|VIP1_BOVIN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Bos taurus GN=PPIP5K1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q6PFW1|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q5RDF1|VIP1_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Pongo abelii GN=PPIP5K1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P0C644|VIP1_RAT Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus GN=Ppip5k1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P91309|VIP1_CAEEL Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Caenorhabditis elegans GN=F46F11.1 PE=3 SV=3 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 993 | ||||||
| 224080003 | 1061 | predicted protein [Populus trichocarpa] | 0.976 | 0.914 | 0.843 | 0.0 | |
| 255552826 | 1054 | acid phosphatase, putative [Ricinus comm | 0.984 | 0.927 | 0.847 | 0.0 | |
| 224140923 | 1038 | predicted protein [Populus trichocarpa] | 0.975 | 0.933 | 0.835 | 0.0 | |
| 359488777 | 1051 | PREDICTED: inositol hexakisphosphate and | 0.975 | 0.921 | 0.837 | 0.0 | |
| 356568616 | 1053 | PREDICTED: inositol hexakisphosphate and | 0.984 | 0.928 | 0.839 | 0.0 | |
| 356529953 | 1059 | PREDICTED: inositol hexakisphosphate and | 0.982 | 0.921 | 0.839 | 0.0 | |
| 124359918 | 1058 | Histidine acid phosphatase [Medicago tru | 0.982 | 0.922 | 0.834 | 0.0 | |
| 357501599 | 1052 | Inositol hexakisphosphate and diphosphoi | 0.982 | 0.927 | 0.834 | 0.0 | |
| 449461909 | 1049 | PREDICTED: inositol hexakisphosphate and | 0.981 | 0.929 | 0.811 | 0.0 | |
| 449505847 | 1049 | PREDICTED: LOW QUALITY PROTEIN: inositol | 0.981 | 0.929 | 0.807 | 0.0 |
| >gi|224080003|ref|XP_002305988.1| predicted protein [Populus trichocarpa] gi|222848952|gb|EEE86499.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1706 bits (4418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1008 (84%), Positives = 907/1008 (89%), Gaps = 38/1008 (3%)
Query: 13 WPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPR 72
WPICDCLIAFYSSGYPLEKAE+YATLRKPFLVNELEPQHLLHDRRKVYE+LE +GIPVPR
Sbjct: 65 WPICDCLIAFYSSGYPLEKAEAYATLRKPFLVNELEPQHLLHDRRKVYERLEMFGIPVPR 124
Query: 73 YALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKE 132
YALVNRE PYQELD F EEEDFVEVHG+RFWKPFVEKPV GDDHSIMIYYPSSAGGGMKE
Sbjct: 125 YALVNREFPYQELDCFFEEEDFVEVHGSRFWKPFVEKPVDGDDHSIMIYYPSSAGGGMKE 184
Query: 133 LFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG 192
LFRKVGNRSSEFHP+VRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG
Sbjct: 185 LFRKVGNRSSEFHPEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG 244
Query: 193 VVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVK 252
VVMRNPDGKEVRYPVLLTPNEKQMAR+VCIAF QAVCGFDLLRCEGRSYVCDVNGWSFVK
Sbjct: 245 VVMRNPDGKEVRYPVLLTPNEKQMARDVCIAFSQAVCGFDLLRCEGRSYVCDVNGWSFVK 304
Query: 253 NSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGL-GTFGQ 311
NSYKYYDDAACVLRK+ L+AKAPHLSSAIPP LPWKVNEPVQP+EGLTRQGSG+ GTFGQ
Sbjct: 305 NSYKYYDDAACVLRKLLLDAKAPHLSSAIPPTLPWKVNEPVQPSEGLTRQGSGIIGTFGQ 364
Query: 312 SEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLD 371
SEELRCVIA++RHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPR+ETKLKSAVQLQDLLD
Sbjct: 365 SEELRCVIAIIRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRSETKLKSAVQLQDLLD 424
Query: 372 ATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFF-NVQ----------- 419
ATRILVPR+RPGRESDSEAEDFEH++K A+L GG F + VQ
Sbjct: 425 ATRILVPRTRPGRESDSEAEDFEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKVPK 484
Query: 420 -----------DVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTG 468
+ L+ ++ +L + Q + + +++++N + G EGTG
Sbjct: 485 SNGEGEEERPVEALMVLKYGGVLTHAGRKQAEE--LGRYFRNN------MYPG---EGTG 533
Query: 469 LLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDN 528
LLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEG LTPILVSLVSKDSSMLDGLDN
Sbjct: 534 LLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGPLTPILVSLVSKDSSMLDGLDN 593
Query: 529 ASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTE 588
ASIEMEEAKARLNEII S +K+++SNGSS+ PWM DG GLP NASELLP LVKLTKKVTE
Sbjct: 594 ASIEMEEAKARLNEIITSVAKIVNSNGSSEFPWMTDGAGLPSNASELLPNLVKLTKKVTE 653
Query: 589 QVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWR 648
QVR LA DEDE+L ET+ YDVIPPYDQAKALGKTNID+DRIAAGLPCGSEGFLLMYARW+
Sbjct: 654 QVRLLAMDEDEELTETSSYDVIPPYDQAKALGKTNIDIDRIAAGLPCGSEGFLLMYARWK 713
Query: 649 KLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEY 708
KLERDLYNERKERFDITQIPD+YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEY
Sbjct: 714 KLERDLYNERKERFDITQIPDIYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEY 773
Query: 709 GINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYP 768
GINPKQKLKIGSKIARRLLGK+LIDLRNT EEAISVAELK +QDQ S S K +KED DY
Sbjct: 774 GINPKQKLKIGSKIARRLLGKILIDLRNTLEEAISVAELKCNQDQQSASKKNDKEDTDYQ 833
Query: 769 PKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESH 828
KLFIK +D RR+STTS+ISMDQDDDDDKET+YRLDPKYANVKTP+RHVRTRLYFTSESH
Sbjct: 834 SKLFIKNEDMRRTSTTSEISMDQDDDDDKETKYRLDPKYANVKTPDRHVRTRLYFTSESH 893
Query: 829 IHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVALEDPK 888
IHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMS IVLRMFENT VALEDPK
Sbjct: 894 IHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSNIVLRMFENTEVALEDPK 953
Query: 889 RFRIELTFSRGADLSPLEKNDSEASSLHQEHTLPIMGPERLQEVGSYLTLEKMEKMIRPF 948
RFRIE+TFSRGADLSPLEKNDSEA SLHQEHTLPIMGPERLQEVGSYLTLEKME M RPF
Sbjct: 954 RFRIEMTFSRGADLSPLEKNDSEAISLHQEHTLPIMGPERLQEVGSYLTLEKMEMMFRPF 1013
Query: 949 AMPAEDFPPPSTPAGFTGYFAKSASVLERLVNLWPFH---KNANSNGK 993
AMPAEDFPPPSTPAGF+GYF+KSA+VLERLVNLWPFH K+A++NGK
Sbjct: 1014 AMPAEDFPPPSTPAGFSGYFSKSAAVLERLVNLWPFHKHDKHASANGK 1061
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552826|ref|XP_002517456.1| acid phosphatase, putative [Ricinus communis] gi|223543467|gb|EEF44998.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224140923|ref|XP_002323826.1| predicted protein [Populus trichocarpa] gi|222866828|gb|EEF03959.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359488777|ref|XP_002282227.2| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356568616|ref|XP_003552506.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356529953|ref|XP_003533550.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|124359918|gb|ABN07938.1| Histidine acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357501599|ref|XP_003621088.1| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula] gi|355496103|gb|AES77306.1| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449461909|ref|XP_004148684.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449505847|ref|XP_004162584.1| PREDICTED: LOW QUALITY PROTEIN: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 993 | ||||||
| TAIR|locus:2102057 | 1056 | AT3G01310 [Arabidopsis thalian | 0.978 | 0.920 | 0.760 | 0.0 | |
| UNIPROTKB|O43314 | 1243 | PPIP5K2 "Inositol hexakisphosp | 0.365 | 0.292 | 0.535 | 1.3e-172 | |
| UNIPROTKB|Q5REW0 | 1244 | PPIP5K2 "Inositol hexakisphosp | 0.365 | 0.291 | 0.535 | 4.4e-172 | |
| UNIPROTKB|E1BXR8 | 1179 | PPIP5K1 "Uncharacterized prote | 0.365 | 0.307 | 0.540 | 3.4e-170 | |
| UNIPROTKB|J9P7K0 | 1406 | PPIP5K1 "Uncharacterized prote | 0.372 | 0.263 | 0.528 | 7.5e-168 | |
| UNIPROTKB|D4A214 | 1413 | Hisppd2a "Protein Hisppd2a" [R | 0.372 | 0.261 | 0.530 | 1.5e-167 | |
| UNIPROTKB|B7WPL9 | 1429 | PPIP5K1 "Inositol hexakisphosp | 0.372 | 0.258 | 0.528 | 2.4e-167 | |
| MGI|MGI:2443281 | 1436 | Ppip5k1 "diphosphoinositol pen | 0.383 | 0.265 | 0.523 | 3.5e-167 | |
| RGD|1311552 | 1434 | Ppip5k1 "diphosphoinositol pen | 0.372 | 0.258 | 0.530 | 6e-167 | |
| UNIPROTKB|P0C644 | 1434 | Ppip5k1 "Inositol hexakisphosp | 0.372 | 0.258 | 0.530 | 6e-167 |
| TAIR|locus:2102057 AT3G01310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3834 (1354.7 bits), Expect = 0., P = 0.
Identities = 759/998 (76%), Positives = 835/998 (83%)
Query: 13 WPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPR 72
WPICDCLIAF+SSGYPLEKA++YA LRKPFLVNEL+PQ+LLHDRRKVYE LE YGIPVPR
Sbjct: 67 WPICDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPR 126
Query: 73 YALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKE 132
YA VNR+VP Q+L YF+EEEDFVEVHG RFWKPFVEKPV+GDDHSIMIYYPSSAGGGMKE
Sbjct: 127 YACVNRKVPNQDLHYFVEEEDFVEVHGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKE 186
Query: 133 LFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG 192
LFRK+GNRSSEFHPDVRRVRREGSYIYEEFM TGGTDVKVYTVGPEYAHAEARKSPVVDG
Sbjct: 187 LFRKIGNRSSEFHPDVRRVRREGSYIYEEFMATGGTDVKVYTVGPEYAHAEARKSPVVDG 246
Query: 193 VVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVK 252
VVMRN DGKEVRYPVLLTP EKQMAREVCIAFRQAVCGFDLLR EG SYVCDVNGWSFVK
Sbjct: 247 VVMRNTDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVK 306
Query: 253 NSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGL-GTFGQ 311
NSYKYYDDAACVLRKM L+AKAPHLSS +PP LPWKVNEPVQ EGLTRQGSG+ GTFGQ
Sbjct: 307 NSYKYYDDAACVLRKMCLDAKAPHLSSTLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQ 366
Query: 312 SEELRCVIAVMRHGDRTPKQXXXXXXXXXXXXXXMLKYNGGRPRAETKLKSAVQLQDLLD 371
SEELRCVIAV+RHGDRTPKQ MLKYNGG+PRAETKLKSAVQLQDLLD
Sbjct: 367 SEELRCVIAVVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLD 426
Query: 372 ATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFN-VQDVLLSIQCHLL 430
ATR+LVPR+RPGRESDS+AED EH++K A+L GG F + VQ L ++ +
Sbjct: 427 ATRMLVPRTRPGRESDSDAEDLEHAEKLRQVKAVLEEGGHFSGIYRKVQ--LKPLKWVKI 484
Query: 431 LANLVSGQF---IDFLIEQFYQD-------NGVNEIAYWWGSH---SEGTGLLRLHSTYR 477
+ G+ ++ L+ Y E+ ++ ++ EGTGLLRLHSTYR
Sbjct: 485 PKSDGDGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYR 544
Query: 478 HDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAK 537
HDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEME AK
Sbjct: 545 HDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEAAK 604
Query: 538 ARLNEIIKSGSKMIHSN--GSSDCPWMADGVGLPPNASEXXXXXXXXXXXXXEQVRQLAK 595
ARLNEI+ SG+KMI + S D PWM DG GLPPNA E EQVR LA
Sbjct: 605 ARLNEIVTSGTKMIDDDQVSSEDFPWMTDGAGLPPNAHELLRELVKLTKNVTEQVRLLAM 664
Query: 596 DEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLY 655
DEDE+L E PYD+IPPYDQAKALGKTNID DRIA+GLPCGSEGFLLM+ARW KL RDLY
Sbjct: 665 DEDENLTE--PYDIIPPYDQAKALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLY 722
Query: 656 NERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQK 715
NERK+RFDITQIPDVYDSCKYDLLHN+HL+L+GLDELFKVAQLLADGVIPNEYGINP+QK
Sbjct: 723 NERKDRFDITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQK 782
Query: 716 LKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKA 775
LKIGSKIARRL+GK+LIDLRNTREEA+SVAELK SQ+QV + +++ED++ PKLFI +
Sbjct: 783 LKIGSKIARRLMGKILIDLRNTREEALSVAELKESQEQVLSLSASQREDRNSQPKLFINS 842
Query: 776 XXXXXXXXXXXXXXXXXXXXXKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNV 835
KET+YRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNV
Sbjct: 843 DELRRPGTGDKDEDDD-----KETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNV 897
Query: 836 LRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVALEDPKRFRIELT 895
LRYCNLDESL GE+SL+C +ALERL KTKELDYMSYIVLR+FENT V+LEDPKRFRIELT
Sbjct: 898 LRYCNLDESLLGEESLICQNALERLCKTKELDYMSYIVLRLFENTEVSLEDPKRFRIELT 957
Query: 896 FSRGADLSPLEKNDSEASSLHQEHTLPIMGPERLQEVGSYLTLEKMEKMIRPFAMPAEDF 955
FSRGADLSPL ND EA +L +EHTLPIMGPERLQEVGS L+LE MEKM+RPFAMPAEDF
Sbjct: 958 FSRGADLSPLRNNDDEAETLLREHTLPIMGPERLQEVGSCLSLETMEKMVRPFAMPAEDF 1017
Query: 956 PPPSTPAGFTGYFAKSASVLERLVNLWPFHKNANSNGK 993
PP STP GF+GYF+KSA+VLERLVNL+ +KN++SNG+
Sbjct: 1018 PPASTPVGFSGYFSKSAAVLERLVNLFHNYKNSSSNGR 1055
|
|
| UNIPROTKB|O43314 PPIP5K2 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5REW0 PPIP5K2 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BXR8 PPIP5K1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P7K0 PPIP5K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A214 Hisppd2a "Protein Hisppd2a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7WPL9 PPIP5K1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2443281 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1311552 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P0C644 Ppip5k1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.4 | 0.766 |
| 4th Layer | 2.7.4.21 | 0.824 |
| 4th Layer | 2.7.4.24 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_LG_IV0352 | hypothetical protein (1062 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 993 | |||
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 3e-16 | |
| cd07061 | 242 | cd07061, HP_HAP_like, Histidine phosphatase domain | 2e-08 | |
| pfam08443 | 190 | pfam08443, RimK, RimK-like ATP-grasp domain | 1e-05 | |
| TIGR00768 | 277 | TIGR00768, rimK_fam, alpha-L-glutamate ligases, Ri | 3e-05 | |
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 1e-04 | |
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 0.001 | |
| COG0189 | 318 | COG0189, RimK, Glutathione synthase/Ribosomal prot | 0.001 | |
| cd07040 | 153 | cd07040, HP, Histidine phosphatase domain found in | 0.002 |
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 3e-16
Identities = 55/272 (20%), Positives = 88/272 (32%), Gaps = 78/272 (28%)
Query: 468 GLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLD 527
GLL ++ I SSD R SA AF GL EG D+ +LD
Sbjct: 73 GLLPDGYPP-SEVYIRSSDSNRTLASAQAFLAGLFPPEG----------DIDNDLLDWQP 121
Query: 528 NASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVT 587
+ + E K L ++ G CP + + K+V
Sbjct: 122 IPVVTLPEVKKALANLLLL--------GYDSCPAFDE---------------SLVEKRVD 158
Query: 588 EQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARW 647
++ +L E +A+ G+TN+ W
Sbjct: 159 PELAKLLAVYLEPIAKRL---------SQLLPGETNLT-----------------GLDVW 192
Query: 648 RKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNE 707
L+ L+ D + PD++ YD LH +L+ L+E + ++
Sbjct: 193 ALLDLCLFE--TNASDNSPFPDLFTG--YDALHLEYLSD--LEEYYGLS----------- 235
Query: 708 YGINPKQKLKIGSKIARRLLGKLLIDLRNTRE 739
GI P+ IG + LL +L L +
Sbjct: 236 -GIGPELAKLIGGPLLNELLKRLTNALVPDQT 266
|
The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Length = 327 |
| >gnl|CDD|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >gnl|CDD|117020 pfam08443, RimK, RimK-like ATP-grasp domain | Back alignment and domain information |
|---|
| >gnl|CDD|233121 TIGR00768, rimK_fam, alpha-L-glutamate ligases, RimK family | Back alignment and domain information |
|---|
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
| >gnl|CDD|223267 COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 993 | |||
| KOG1057 | 1018 | consensus Arp2/3 complex-interacting protein VIP1/ | 100.0 | |
| PF08443 | 190 | RimK: RimK-like ATP-grasp domain; InterPro: IPR013 | 99.94 | |
| COG0189 | 318 | RimK Glutathione synthase/Ribosomal protein S6 mod | 99.94 | |
| PRK10446 | 300 | ribosomal protein S6 modification protein; Provisi | 99.9 | |
| PLN02941 | 328 | inositol-tetrakisphosphate 1-kinase | 99.89 | |
| TIGR02144 | 280 | LysX_arch Lysine biosynthesis enzyme LysX. The fam | 99.86 | |
| TIGR00768 | 277 | rimK_fam alpha-L-glutamate ligases, RimK family. T | 99.85 | |
| PRK05246 | 316 | glutathione synthetase; Provisional | 99.85 | |
| TIGR01380 | 312 | glut_syn glutathione synthetase, prokaryotic. This | 99.84 | |
| PF00328 | 347 | His_Phos_2: Histidine phosphatase superfamily (bra | 99.82 | |
| PRK12458 | 338 | glutathione synthetase; Provisional | 99.81 | |
| TIGR02291 | 317 | rimK_rel_E_lig alpha-L-glutamate ligase-related pr | 99.73 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.72 | |
| PRK14016 | 727 | cyanophycin synthetase; Provisional | 99.67 | |
| TIGR02068 | 864 | cya_phycin_syn cyanophycin synthetase. Cyanophycin | 99.65 | |
| PRK02471 | 752 | bifunctional glutamate--cysteine ligase/glutathion | 99.61 | |
| PRK01372 | 304 | ddl D-alanine--D-alanine ligase; Reviewed | 99.6 | |
| TIGR01435 | 737 | glu_cys_lig_rel glutamate--cysteine ligase/gamma-g | 99.51 | |
| TIGR01205 | 315 | D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a | 99.48 | |
| PF02955 | 173 | GSH-S_ATP: Prokaryotic glutathione synthetase, ATP | 99.42 | |
| PRK14571 | 299 | D-alanyl-alanine synthetase A; Provisional | 99.4 | |
| PRK14569 | 296 | D-alanyl-alanine synthetase A; Provisional | 99.38 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 99.35 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 99.29 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 99.29 | |
| KOG1057 | 1018 | consensus Arp2/3 complex-interacting protein VIP1/ | 99.26 | |
| PRK14572 | 347 | D-alanyl-alanine synthetase A; Provisional | 99.25 | |
| PRK01966 | 333 | ddl D-alanyl-alanine synthetase A; Reviewed | 99.2 | |
| PRK14568 | 343 | vanB D-alanine--D-lactate ligase; Provisional | 99.19 | |
| cd07061 | 242 | HP_HAP_like Histidine phosphatase domain found in | 99.17 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 99.14 | |
| PRK13790 | 379 | phosphoribosylamine--glycine ligase; Provisional | 99.12 | |
| PRK14570 | 364 | D-alanyl-alanine synthetase A; Provisional | 99.11 | |
| PF13535 | 184 | ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A | 99.1 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 99.08 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 99.05 | |
| PRK07206 | 416 | hypothetical protein; Provisional | 99.01 | |
| PF05770 | 307 | Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- | 99.0 | |
| PRK00885 | 420 | phosphoribosylamine--glycine ligase; Provisional | 98.97 | |
| PRK02186 | 887 | argininosuccinate lyase; Provisional | 98.92 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 98.88 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.87 | |
| PRK05586 | 447 | biotin carboxylase; Validated | 98.87 | |
| PF02655 | 161 | ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 | 98.85 | |
| PRK08654 | 499 | pyruvate carboxylase subunit A; Validated | 98.85 | |
| PRK08463 | 478 | acetyl-CoA carboxylase subunit A; Validated | 98.84 | |
| PRK08462 | 445 | biotin carboxylase; Validated | 98.84 | |
| PRK07178 | 472 | pyruvate carboxylase subunit A; Validated | 98.82 | |
| PF14397 | 285 | ATPgrasp_ST: Sugar-transfer associated ATP-grasp | 98.82 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 98.81 | |
| PRK06111 | 450 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.8 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 98.77 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.77 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 98.77 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.68 | |
| TIGR01235 | 1143 | pyruv_carbox pyruvate carboxylase. This enzyme pla | 98.66 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 98.66 | |
| PRK12999 | 1146 | pyruvate carboxylase; Reviewed | 98.59 | |
| PF02750 | 203 | Synapsin_C: Synapsin, ATP binding domain; InterPro | 98.58 | |
| PF07478 | 203 | Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In | 98.58 | |
| PRK14573 | 809 | bifunctional D-alanyl-alanine synthetase A/UDP-N-a | 98.57 | |
| PLN02257 | 434 | phosphoribosylamine--glycine ligase | 98.55 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.53 | |
| COG1821 | 307 | Predicted ATP-utilizing enzyme (ATP-grasp superfam | 98.5 | |
| PF15632 | 329 | ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa | 98.5 | |
| COG1181 | 317 | DdlA D-alanine-D-alanine ligase and related ATP-gr | 98.49 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.48 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 98.47 | |
| PRK06524 | 493 | biotin carboxylase-like protein; Validated | 98.44 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.41 | |
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 98.39 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.28 | |
| TIGR02712 | 1201 | urea_carbox urea carboxylase. Members of this fami | 98.24 | |
| PF14398 | 262 | ATPgrasp_YheCD: YheC/D like ATP-grasp | 98.17 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.12 | |
| PRK05784 | 486 | phosphoribosylamine--glycine ligase; Provisional | 98.04 | |
| PRK13278 | 358 | purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D | 97.77 | |
| PF02786 | 211 | CPSase_L_D2: Carbamoyl-phosphate synthase L chain, | 97.45 | |
| COG2232 | 389 | Predicted ATP-dependent carboligase related to bio | 97.4 | |
| PRK13277 | 366 | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo | 97.38 | |
| COG0439 | 449 | AccC Biotin carboxylase [Lipid metabolism] | 97.35 | |
| KOG3895 | 488 | consensus Synaptic vesicle protein Synapsin [Signa | 96.75 | |
| PF02222 | 172 | ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T | 96.73 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.44 | |
| COG0458 | 400 | CarB Carbamoylphosphate synthase large subunit (sp | 96.4 | |
| PF14305 | 239 | ATPgrasp_TupA: TupA-like ATPgrasp | 95.83 | |
| ), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071 | 194 | GARS_A: Phosphoribosylglycinamide synthetase, ATP- | 95.81 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.54 | |
| COG3919 | 415 | Predicted ATP-grasp enzyme [General function predi | 93.06 | |
| KOG3672 | 487 | consensus Histidine acid phosphatase [General func | 91.32 | |
| COG1038 | 1149 | PycA Pyruvate carboxylase [Energy production and c | 87.05 | |
| PF14243 | 130 | DUF4343: Domain of unknown function (DUF4343) | 82.75 |
| >KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-279 Score=2339.68 Aligned_cols=920 Identities=55% Similarity=0.832 Sum_probs=833.7
Q ss_pred eeccCCCCCCcCEEeecccCCCChHHHHHHHhhcCCcccCCcchhhhhhhHHHHHHHHHhCCCCCCCEEEEeccCCCccc
Q 001944 6 FINLGTRWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQEL 85 (993)
Q Consensus 6 ~~~~Ve~WP~cD~LIsF~S~GFPL~KAi~y~~lr~p~~iNdl~~q~ll~DR~~v~qiL~~~gIP~P~t~~~~r~~p~~~~ 85 (993)
.-|||||||+|||||||||+||||+||++|++|||||+||||.||+++||||+||+||++.|||+|++.+++|++|.+.+
T Consensus 81 L~EpVENWP~CdcLIsFhSsGFPLdKAiaY~kLRnPFviNdL~mQyll~DRR~Vy~iLe~~gI~~PRya~~nr~~pn~~~ 160 (1018)
T KOG1057|consen 81 LREPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLDMQYLLQDRREVYSILEAEGIPLPRYAILNRDPPNPKL 160 (1018)
T ss_pred eccccccCcccceEEEeccCCCChHHHHHHHHhcCCeeeccccHHHHHHHHHHHHHHHHHcCCCCceeEeecCCCCChHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred cccccccceeeecCeeccCcEEEeeccccCcceeEEeccCCCChHHHHHhhcCCCcccccccccccccCcceEEeeccCC
Q 001944 86 DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPT 165 (993)
Q Consensus 86 ~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t 165 (993)
++++|++|+|+|||++|.||||||||+|||||||||||+|+|||++|||||||||||+|+|++ .+|+.|||||||||+|
T Consensus 161 ~~lie~eD~vEVnGevf~KPFVEKPVs~EDHNIYIYYPsSaGGGsqrLFRKIgnRSS~y~P~~-~vRkeGSyIYEeFMpt 239 (1018)
T KOG1057|consen 161 CNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNIYIYYPSSAGGGSQRLFRKIGNRSSEYHPDS-SVRKEGSYIYEEFMPT 239 (1018)
T ss_pred hhhhcCCCeEEEcceeccCCcccCCCCcccccEEEEecCCCCccHHHHHHHhcccccccCCcc-ccccccceehhhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCceeEEEEECCceeEEEeeeCCCCCCeeeecCCCCceeeeeeCCHHHHHHHHHHHHHhCCceeEEEEEeeCCCcEEEec
Q 001944 166 GGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDV 245 (993)
Q Consensus 166 ~G~DIKVytVG~~~vhAe~RKSP~vDG~vrrN~~gke~r~~v~Lt~eEk~iA~ka~~afgq~VcGfDLLRs~g~syV~DV 245 (993)
+|||||||||||+|+|||+||||||||+|+||+||||+||||.||++||.||+|||.||+|+||||||||++|+||||||
T Consensus 240 dgtDVKvYTVGp~YaHAEaRKSPvvDGkV~Rns~GKEvRYpv~Ls~~EK~iA~KVciAF~Q~VCGFDLLRa~G~SYVcDV 319 (1018)
T KOG1057|consen 240 DGTDVKVYTVGPDYAHAEARKSPVVDGKVERNSDGKEVRYPVILNSSEKQIARKVCIAFKQTVCGFDLLRANGKSYVCDV 319 (1018)
T ss_pred CCccceEEeeCcchhhhhhccCccccceeeecCCCceeeceeecChhhHHHHhHHHhhccccccchHHhhcCCceEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCccceEEEEEEEEcC
Q 001944 246 NGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHG 325 (993)
Q Consensus 246 NGwSFVK~n~kYYddcA~iL~~~~l~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~eLr~vvaViRHg 325 (993)
|||||||||+|||||||+||++||+.+.+++..+.+|+++||..+++ .++.+++ ++++++||||||||||||
T Consensus 320 NGfSFVKns~kYYDd~AkIL~~~~~~ak~~~~~~~iP~~~p~~~~~~---~~~~v~~-----~~g~~~elrcviaViRHg 391 (1018)
T KOG1057|consen 320 NGFSFVKNSNKYYDDCAKILGKMNLSARALAPASQIPWSLPGIRNEK---VEPWVPT-----SSGGMMELRCVIAVIRHG 391 (1018)
T ss_pred cceeeeecchhhhHHHHHHHhhhhhhhhccCccccCCCCCcccccCC---CCCceec-----CCCccceeeeeEEEEecC
Confidence 99999999999999999999999999999888888898888877655 2344443 567999999999999999
Q ss_pred CCCcccceeEEechHHHHHHHHhhcCCCCccceeeccHHhHHHHHHHHHhhccccCCCCCCCCchhhhhhhhhHHHHHHH
Q 001944 326 DRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAI 405 (993)
Q Consensus 326 DRTPKQK~K~~~~~~~fi~L~~~~~~~~~~~e~kLk~~~qLq~vld~~r~~l~~~~~g~~~~~~~e~~e~~~Kl~ql~~v 405 (993)
||||||||||+|++++||+||++|+|++ ++|+|||+|.|||+|||++|.++++.+ ++++++.|...||+||++|
T Consensus 392 DRTPKQK~K~~vt~~~f~~L~ek~~G~~-~~e~klk~~~QLq~vLd~ar~ll~e~~-----~~~~~die~~~KleQlk~v 465 (1018)
T KOG1057|consen 392 DRTPKQKMKLSVTSPKFLGLFEKYDGYK-KEETKLKSANQLQEVLDAARLLLEEKE-----DKDAEDIEEAKKLEQLKNV 465 (1018)
T ss_pred CCCccceeeEEeccHHHHHHHHhhCCcc-ccceeeCCHHHHHHHHHHHHhhhcccc-----cCcccchhhHHHHHHHHHH
Confidence 9999999999999999999999999876 789999999999999999999998754 2234445668899999999
Q ss_pred HhcCCCCCCcce-eeccchhhhccccccccccCccceeEEEEeccCcch---------hhHHHhhc--c-CCCCcchhhh
Q 001944 406 LHLGGQFEKFFN-VQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGV---------NEIAYWWG--S-HSEGTGLLRL 472 (993)
Q Consensus 406 Le~~~~fsGinr-vQlKp~~~~~~~~~~~~~~~~~~~~lLIlKW~~GGE---------e~LG~~fR--Y-p~~~~gLLrL 472 (993)
|||||||||||| |||||+.| +..++++++.++...++||+|| ||| |+|||+|| | +|+|+|||||
T Consensus 466 LE~~ghFsGinrKVQlk~l~~-~~~k~se~e~~r~~~llliLKw--GGelT~agr~QAeeLGr~FR~~~~gg~g~gllrL 542 (1018)
T KOG1057|consen 466 LEMYGHFSGINRKVQLKPLKW-VYVKKSEGELEREPQLLLILKW--GGELTHAGRYQAEELGRQFRCDYPGGQGLGLLRL 542 (1018)
T ss_pred HHhhCCCCCccceeeeeeccc-cCCCCCccccccCcceeEEeee--CCEecchhHhhHHHHHHHHHhcCCCCCCcceeee
Confidence 999999999999 99999999 5556666666666789999999 999 99999999 5 5789999999
Q ss_pred hhcccccceEeecCCchHHHHHHHHHHhhccCCCCCCcceeeeEecCCCCcCCCccchHHHHHHHHHHHHHHhcCCCCCC
Q 001944 473 HSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIH 552 (993)
Q Consensus 473 hst~rhDlKIysSdEgRVq~TAaaFakg~L~legeLtPilv~lV~kd~~lLD~s~~a~~~m~~vK~kL~~lL~~~~~~~~ 552 (993)
||||||||||||||||||||||||||||||+|||+|||||||||+||+.|||++++|+++|++||++||+||+.|.++
T Consensus 543 hst~rhDlKIYaSdEgRVqmtAaaFAkgLL~lEgelTpiLvqmVkkdn~LLD~~~~as~~m~~vK~~L~~ilq~~~~~-- 620 (1018)
T KOG1057|consen 543 HSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKKDNTLLDDDNAASSYMDKVKARLHEILQAGREF-- 620 (1018)
T ss_pred hhhhhccceeEecCcchHHHHHHHHHHHHHhhccCCcHHHHHHHHhcchhhcCcchhHHHHHHHHHHHHHHHhcCCcC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhchhcccCCCCCCCCChhhhhhccCCccchhhhccC
Q 001944 553 SNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAG 632 (993)
Q Consensus 553 ~~~~~~~~w~~~~~~~~~~P~~~~~~v~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 632 (993)
+++|+||.. + |+|++++.+++++|+.++..+++.+.. ..++ ..|+++.+|.+
T Consensus 621 ---~~e~~~~~~---~-P~~~~~l~~~ve~vk~~~k~~~e~~~~-------------~~~~--------~~i~v~~~~~r 672 (1018)
T KOG1057|consen 621 ---TPEFDWPEL---M-PNPSEVLTQVVELVKNPVKVCDENFAL-------------IEPL--------DHIDVERIQPR 672 (1018)
T ss_pred ---CCccchhhc---C-CcHhHHHHHHHHHHHhHHHHHHHhhhc-------------cccc--------cceeeecccCC
Confidence 477899975 3 599999999999999998887764321 1122 34889999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhcccCCcccCCCCCcchhhhhhhhhccccCCcccHHHHHHHHHHhcceecccccCCCc
Q 001944 633 LPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINP 712 (993)
Q Consensus 633 ~~c~gE~~~L~~eRW~KL~~dF~~~k~~kfD~SKIpdiYD~iKYD~lHN~~l~l~~l~ELY~~aK~LaD~V~PqEYGI~~ 712 (993)
|+|++|+|+||++||+|||+|||+. .++||||||||||||||||+|||++|.++++.|||.+||.|||+|+||||||++
T Consensus 673 ~~~~sE~~~Lm~~RW~Kl~rdf~~k-~~r~DiSKIpdiYD~~KYD~~HN~~l~~~~~~ely~~ak~lad~vip~eYgi~~ 751 (1018)
T KOG1057|consen 673 WPCHSETPDLMRERWEKLERDFYNK-RERFDISKIPDIYDTIKYDLLHNRQLLLNGFDELYKYAKLLADIVIPQEYGINP 751 (1018)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHhhh-ccccCccccchHHhhhhHHhhcchhhhhccccHHHHHHHhhcccccccccCCCH
Confidence 9999999999999999999999975 599999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHhHHhhhhccccccccccccc-ccCCCC-CCccccccccccCCCCccCCCCC
Q 001944 713 KQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTE-KEDKDY-PPKLFIKADDTRRSSTTSDISMD 790 (993)
Q Consensus 713 ~EKl~IG~~~~~pLL~KI~~DL~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~ 790 (993)
+|||+||..+|.|||+||+.||+++++ +..++.+++.+++. .++.. .-...| .++..+......+-.. +..
T Consensus 752 ~~kl~I~~~~~~~ll~Ki~~dL~~~~e--~~~~et~~~~~p~~-~sp~~~~r~~lY~~sk~~v~sl~~~ryG~----~~~ 824 (1018)
T KOG1057|consen 752 QEKLKIGQGICTPLLGKILSDLVRTLE--LESAETKNRLNPVY-LSPRRHVRTRLYFTSKSHVHSLLLRRYGI----SDV 824 (1018)
T ss_pred HHhhhhhhhhcchhhhhhhHhhhcchh--hcchhhhcccCccc-cChhHHHHHHHhhhhHhhhhhhhhhhcCC----chh
Confidence 999999999999999999999999886 45666676666542 11111 000111 1222222222212111 111
Q ss_pred CCCCcccccccccCcccCCCCCCccceeeEEEeecchhHHHHHHHHHhcCCcccccccchhhhhhhhhhhcCCCCCcccc
Q 001944 791 QDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMS 870 (993)
Q Consensus 791 ~~~~~~~E~~~RL~p~ya~V~SP~RhVRtrlYFTsESHIhsLLNvlr~~~l~~~~~~e~~~i~~~a~~~l~~i~ELdYlS 870 (993)
...++..++.+||.+.+.+..++.||++||+|||+|||||+|+||++||.++.+..|.+++++++|+..++..+|||||+
T Consensus 825 ~~ln~~~~t~~~L~~~~~~d~~~e~~~~~rlyFtreshi~~l~nv~~~~~~dEs~~g~~~~~~~~~l~r~~~~~eld~~~ 904 (1018)
T KOG1057|consen 825 EKLNDGLLTSIRLYEQILNDPTSERHFHTRLYFTRESHIYTLMNVIRYCNLDESDRGLPMKICRNALPRLCDLKELDYLS 904 (1018)
T ss_pred hhhcccchhceeechhhccCCcccccceeEEEeccchhhhhhhhHhhhccccccccCCccccCcccCcccccchhhhhHH
Confidence 22345678999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred cceEEEEecCCCCCCCCCeeEEEEEecCCCC-CCCCCcCCCccCCCCCCcccccC-CCccccccCCcccHHHHHHhhccC
Q 001944 871 YIVLRMFENTAVALEDPKRFRIELTFSRGAD-LSPLEKNDSEASSLHQEHTLPIM-GPERLQEVGSYLTLEKMEKMIRPF 948 (993)
Q Consensus 871 qIvf~lYE~~~~~~~~~~rf~Iei~~SpG~~-~~pl~~~~~~~~~ld~~H~l~~~-pr~~L~~~~~~l~l~~~~~~~~~~ 948 (993)
||||||||++.++ .++||+|||++||||+ .+||| .+|+.+|++||+ |+++|+ ++|+|++|++++++|
T Consensus 905 ~i~fel~e~t~~S--~~Kr~~~~lt~s~g~~~~~plD------~~l~~~~~ip~i~P~~~l~---~~Lsl~~v~~~lr~~ 973 (1018)
T KOG1057|consen 905 QIVFELFENTEAS--GPKRFSIRLTSSRGCDLSCPLD------ENLDARHYIPIIGPLESLT---NHLSLEQVEKKLRDF 973 (1018)
T ss_pred HHHHHHhcccccc--cCcccceEEeecCCccccCchh------hhhhccCcccccCcHHHHh---hccCHHHHHHHHHhh
Confidence 9999999999775 4699999999999998 45998 889999999999 999999 899999999999999
Q ss_pred CCCCCCCCCCCCCCCcceeeccchhHHHHHhccccCCCCcCcCCC
Q 001944 949 AMPAEDFPPPSTPAGFTGYFAKSASVLERLVNLWPFHKNANSNGK 993 (993)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (993)
+++.. +|+..+|.++++++++..++++|++++||+++++.++|+
T Consensus 974 ~~~~~-~P~~~~~~~~~s~~s~~~~~~~r~~~~~~~~~~~~~sg~ 1017 (1018)
T KOG1057|consen 974 ATPVI-PPPRFTPVNFTSNSSKSAAKLERLVNLVPPLKNPASSGK 1017 (1018)
T ss_pred ccccc-CCcccCcccccccchhHHHHHHHHhhccCCccCccccCC
Confidence 99988 889999999999999999999999999999999878885
|
|
| >PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] | Back alignment and domain information |
|---|
| >COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK10446 ribosomal protein S6 modification protein; Provisional | Back alignment and domain information |
|---|
| >PLN02941 inositol-tetrakisphosphate 1-kinase | Back alignment and domain information |
|---|
| >TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX | Back alignment and domain information |
|---|
| >TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family | Back alignment and domain information |
|---|
| >PRK05246 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR01380 glut_syn glutathione synthetase, prokaryotic | Back alignment and domain information |
|---|
| >PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
| >PRK12458 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein | Back alignment and domain information |
|---|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
| >PRK14016 cyanophycin synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR02068 cya_phycin_syn cyanophycin synthetase | Back alignment and domain information |
|---|
| >PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK01372 ddl D-alanine--D-alanine ligase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type | Back alignment and domain information |
|---|
| >TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase | Back alignment and domain information |
|---|
| >PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
| >PRK14571 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PRK14569 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
| >KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK14572 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed | Back alignment and domain information |
|---|
| >PRK14568 vanB D-alanine--D-lactate ligase; Provisional | Back alignment and domain information |
|---|
| >cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
| >PRK13790 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK14570 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A | Back alignment and domain information |
|---|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK07206 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase | Back alignment and domain information |
|---|
| >PRK00885 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK02186 argininosuccinate lyase; Provisional | Back alignment and domain information |
|---|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
| >PRK05586 biotin carboxylase; Validated | Back alignment and domain information |
|---|
| >PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] | Back alignment and domain information |
|---|
| >PRK08654 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PRK08463 acetyl-CoA carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PRK08462 biotin carboxylase; Validated | Back alignment and domain information |
|---|
| >PRK07178 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp | Back alignment and domain information |
|---|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01235 pyruv_carbox pyruvate carboxylase | Back alignment and domain information |
|---|
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
| >PRK12999 pyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) | Back alignment and domain information |
|---|
| >PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 | Back alignment and domain information |
|---|
| >PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PLN02257 phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
| >COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon | Back alignment and domain information |
|---|
| >COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK06524 biotin carboxylase-like protein; Validated | Back alignment and domain information |
|---|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
| >TIGR02712 urea_carbox urea carboxylase | Back alignment and domain information |
|---|
| >PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp | Back alignment and domain information |
|---|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05784 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
| >COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional | Back alignment and domain information |
|---|
| >COG0439 AccC Biotin carboxylase [Lipid metabolism] | Back alignment and domain information |
|---|
| >KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis | Back alignment and domain information |
|---|
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF14305 ATPgrasp_TupA: TupA-like ATPgrasp | Back alignment and domain information |
|---|
| >PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG3919 Predicted ATP-grasp enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3672 consensus Histidine acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1038 PycA Pyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF14243 DUF4343: Domain of unknown function (DUF4343) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 993 | ||||
| 3t7a_A | 330 | Crystal Structure Of The Catalytic Domain Of Human | 8e-95 | ||
| 3t54_A | 334 | Crystal Structure Of The Catalytic Domain Of Human | 1e-94 |
| >pdb|3T7A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Adp At Ph 5.2 Length = 330 | Back alignment and structure |
|
| >pdb|3T54|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Atp And Cadmium Length = 334 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 3t54_A* 3t99_A* Length = 330 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-148
Identities = 165/279 (59%), Positives = 211/279 (75%), Gaps = 3/279 (1%)
Query: 13 WPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPR 72
WP+CDCLI+F+S G+PL+KA +YA LR PF++N+L Q+L+ DRR+VY L+ GI +PR
Sbjct: 55 WPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPR 114
Query: 73 YALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKE 132
YA++NR+ + IE ED VEV+G F KPFVEKPV +DH++ IYYP+SAGGG +
Sbjct: 115 YAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQR 174
Query: 133 LFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG 192
LFRK+G+RSS + P+ VR+ GSYIYEEFMPT GTDVKVYTVGP+YAHAEARKSP +DG
Sbjct: 175 LFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDG 233
Query: 193 VVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVK 252
V R+ +GKEVRYPV+L EK +A +VC+AF+Q VCGFDLLR G+SYVCDVNG+SFVK
Sbjct: 234 KVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVK 293
Query: 253 NSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNE 291
NS KYYDD A +L + + AP IP +P + +
Sbjct: 294 NSMKYYDDCAKILGNIVMRELAPQFH--IPWSIPLEAED 330
|
| >1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Length = 324 | Back alignment and structure |
|---|
| >2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Length = 346 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 993 | |||
| 3t7a_A | 330 | Inositol pyrophosphate kinase; ATP-grAsp fold, tra | 100.0 | |
| 1i7n_A | 309 | Synapsin II; synapse, phosphorylation, neuropeptid | 99.94 | |
| 2p0a_A | 344 | Synapsin-3, synapsin III; neurotransmitter release | 99.94 | |
| 1pk8_A | 422 | RAT synapsin I; ATP binding, ATP grAsp, calcium (I | 99.93 | |
| 2q7d_A | 346 | Inositol-tetrakisphosphate 1-kinase; inositol kina | 99.87 | |
| 1uc8_A | 280 | LYSX, lysine biosynthesis enzyme; alpha-aminoadipa | 99.81 | |
| 1z2n_X | 324 | Inositol 1,3,4-trisphosphate 5/6-kinase; inositol | 99.77 | |
| 3ln6_A | 750 | Glutathione biosynthesis bifunctional protein GSH; | 99.74 | |
| 3ln7_A | 757 | Glutathione biosynthesis bifunctional protein GSH; | 99.74 | |
| 1gsa_A | 316 | Glutathione synthetase; ligase; HET: ADP GSH; 2.00 | 99.69 | |
| 3r5x_A | 307 | D-alanine--D-alanine ligase; alpha-beta structure, | 99.64 | |
| 1iow_A | 306 | DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho | 99.61 | |
| 4eg0_A | 317 | D-alanine--D-alanine ligase; structural genomics, | 99.52 | |
| 2fb9_A | 322 | D-alanine:D-alanine ligase; 1.90A {Thermus caldoph | 99.49 | |
| 1e4e_A | 343 | Vancomycin/teicoplanin A-type resistance protein; | 99.46 | |
| 2pvp_A | 367 | D-alanine-D-alanine ligase; 2.40A {Helicobacter py | 99.46 | |
| 1ehi_A | 377 | LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g | 99.46 | |
| 3df7_A | 305 | Putative ATP-grAsp superfamily protein; putative p | 99.44 | |
| 3se7_A | 346 | VANA; alpha-beta structure, D-alanine-D-lactate li | 99.42 | |
| 2i87_A | 364 | D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco | 99.42 | |
| 2z04_A | 365 | Phosphoribosylaminoimidazole carboxylase ATPase su | 99.34 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 99.34 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 99.33 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 99.32 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 99.31 | |
| 3tqt_A | 372 | D-alanine--D-alanine ligase; cell envelope; 1.88A | 99.3 | |
| 2pn1_A | 331 | Carbamoylphosphate synthase large subunit; ZP_0053 | 99.29 | |
| 2ip4_A | 417 | PURD, phosphoribosylamine--glycine ligase; GAR syn | 99.29 | |
| 3i12_A | 364 | D-alanine-D-alanine ligase A; D-alanyl-alanine syn | 99.28 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 99.27 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 99.26 | |
| 4fu0_A | 357 | D-alanine--D-alanine ligase 7; vancomycin resistan | 99.25 | |
| 3e5n_A | 386 | D-alanine-D-alanine ligase A; bacterial blight; 2. | 99.25 | |
| 3k3p_A | 383 | D-alanine--D-alanine ligase; D-alanyl-alanine synt | 99.24 | |
| 3lwb_A | 373 | D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan | 99.24 | |
| 1vkz_A | 412 | Phosphoribosylamine--glycine ligase; TM1250, struc | 99.23 | |
| 2yrx_A | 451 | Phosphoribosylglycinamide synthetase; glycinamide | 99.2 | |
| 2yw2_A | 424 | Phosphoribosylamine--glycine ligase; glycinamide r | 99.19 | |
| 2xcl_A | 422 | Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- | 99.18 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 99.17 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 99.16 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 99.15 | |
| 2qk4_A | 452 | Trifunctional purine biosynthetic protein adenosi; | 99.13 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 99.13 | |
| 3vot_A | 425 | L-amino acid ligase, BL00235; ATP-grAsp motif, ATP | 99.12 | |
| 3lp8_A | 442 | Phosphoribosylamine-glycine ligase; ssgcid, NIH, n | 99.1 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 99.09 | |
| 3eth_A | 355 | Phosphoribosylaminoimidazole carboxylase ATPase su | 99.08 | |
| 3mjf_A | 431 | Phosphoribosylamine--glycine ligase; structural ge | 99.06 | |
| 2r85_A | 334 | PURP protein PF1517; ATP-grAsp superfamily, unknow | 99.06 | |
| 1ulz_A | 451 | Pyruvate carboxylase N-terminal domain; biotin car | 99.05 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 99.04 | |
| 2vpq_A | 451 | Acetyl-COA carboxylase; bacteria, ATP-grAsp domain | 99.02 | |
| 2dzd_A | 461 | Pyruvate carboxylase; biotin carboxylase, ligase; | 99.0 | |
| 3vmm_A | 474 | Alanine-anticapsin ligase BACD; ATP-grAsp domain, | 98.9 | |
| 3n6r_A | 681 | Propionyl-COA carboxylase, alpha subunit; protein | 98.9 | |
| 1a9x_A | 1073 | Carbamoyl phosphate synthetase (large chain); amid | 98.85 | |
| 1w96_A | 554 | ACC, acetyl-coenzyme A carboxylase; ligase, obesit | 98.85 | |
| 1a9x_A | 1073 | Carbamoyl phosphate synthetase (large chain); amid | 98.8 | |
| 3jrx_A | 587 | Acetyl-COA carboxylase 2; BC domain, soraphen A, a | 98.79 | |
| 3u9t_A | 675 | MCC alpha, methylcrotonyl-COA carboxylase, alpha-s | 98.78 | |
| 3glk_A | 540 | Acetyl-COA carboxylase 2; ATP binding, alternative | 98.78 | |
| 2qf7_A | 1165 | Pyruvate carboxylase protein; multi-domain, multi- | 98.78 | |
| 3va7_A | 1236 | KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A | 98.73 | |
| 3hbl_A | 1150 | Pyruvate carboxylase; TIM barrel, ligase; HET: BTI | 98.71 | |
| 2pbz_A | 320 | Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt | 98.44 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 98.23 | |
| 3it3_A | 342 | Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A | 98.08 | |
| 2r7k_A | 361 | 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib | 97.81 | |
| 2cqy_A | 108 | Propionyl-COA carboxylase alpha chain, mitochondri | 97.39 | |
| 1dkq_A | 410 | Phytase; histidine acid phosphatase fold, hydrolas | 97.13 | |
| 1wr2_A | 238 | Hypothetical protein PH1789; structural genomics, | 97.0 | |
| 3ntl_A | 398 | Acid glucose-1-phosphate phosphatase; histidine ac | 96.95 | |
| 2io8_A | 619 | Bifunctional glutathionylspermidine synthetase/ami | 93.59 | |
| 2nu8_B | 388 | SCS-beta, succinyl-COA synthetase beta chain; citr | 90.22 | |
| 2fp4_B | 395 | Succinyl-COA ligase [GDP-forming] beta-chain, mito | 90.22 | |
| 2gfi_A | 458 | Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces | 89.88 | |
| 3it3_A | 342 | Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A | 89.56 | |
| 1qwo_A | 442 | Phytase; alpha barrel, beta sandwich, orthogonal b | 87.82 | |
| 1qfx_A | 460 | Protein (PH 2.5 acid phosphatase); phosphomonoeste | 87.34 | |
| 2wnh_A | 418 | 3-phytase; histidine acid phosphatase, hydrolase; | 86.41 | |
| 3k4q_A | 444 | 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex | 86.37 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 86.12 | |
| 3ufx_B | 397 | Succinyl-COA synthetase beta subunit; ATP-grAsp fo | 83.63 | |
| 3ntl_A | 398 | Acid glucose-1-phosphate phosphatase; histidine ac | 82.03 | |
| 3tig_A | 380 | TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si | 80.55 | |
| 2wnh_A | 418 | 3-phytase; histidine acid phosphatase, hydrolase; | 80.13 |
| >3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-102 Score=841.36 Aligned_cols=278 Identities=59% Similarity=1.066 Sum_probs=267.0
Q ss_pred eccCCCCCCcCEEeecccCCCChHHHHHHHhhcCCcccCCcchhhhhhhHHHHHHHHHhCCCCCCCEEEEeccCCCcccc
Q 001944 7 INLGTRWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELD 86 (993)
Q Consensus 7 ~~~Ve~WP~cD~LIsF~S~GFPL~KAi~y~~lr~p~~iNdl~~q~ll~DR~~v~qiL~~~gIP~P~t~~~~r~~p~~~~~ 86 (993)
-|||||||+|||||||||+||||+|||+|+++|+||+|||+.+|.++|||+++|++|+++|||||+|+++++++......
T Consensus 49 ~~~ve~wp~~d~lisf~s~gfpl~kai~y~~lr~p~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~ 128 (330)
T 3t7a_A 49 NEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKEC 128 (330)
T ss_dssp HSCGGGSCCCSEEEECCCTTCCHHHHHHHHHHHCCEESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGS
T ss_pred cCCcccCCcCCEEEEeccCCCcHHHHHHHHHHhCCceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCcccc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999986444456
Q ss_pred ccccccceeeecCeeccCcEEEeeccccCcceeEEeccCCCChHHHHHhhcCCCcccccccccccccCcceEEeeccCCC
Q 001944 87 YFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTG 166 (993)
Q Consensus 87 ~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t~ 166 (993)
.++|.+|+|+++|++|+||||+||++|||||||||||+++||||+|||||+||+||+|+|++ .+|++++|||||||+++
T Consensus 129 ~~~e~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~-~vr~~~~~i~QEFI~~~ 207 (330)
T 3t7a_A 129 NLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTD 207 (330)
T ss_dssp SEEECSSEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCC-SCCSSSCEEEEECCCCS
T ss_pred ceeccchhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhh-hhccCCcEEEEeccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999987 67999999999999999
Q ss_pred CceeEEEEECCceeEEEeeeCCCCCCeeeecCCCCceeeeeeCCHHHHHHHHHHHHHhCCceeEEEEEeeCCCcEEEecc
Q 001944 167 GTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVN 246 (993)
Q Consensus 167 G~DIKVytVG~~~vhAe~RKSP~vDG~vrrN~~gke~r~~v~Lt~eEk~iA~ka~~afgq~VcGfDLLRs~g~syV~DVN 246 (993)
|+||||||||+++||||+|+||++||+||||+||||+|++|+||+||++||+|||+||||+||||||||++++|||||||
T Consensus 208 G~DIRv~vVG~~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVN 287 (330)
T 3t7a_A 208 GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVN 287 (330)
T ss_dssp SEEEEEEEESTTCEEEEEEECTTSSCBCCBCTTSCBCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEEECCEEEEEEEEeCCCCCCcEEEcCCCCceeeeecCCHHHHHHHHHHHHHhCCceEEEEEEEECCccEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCC
Q 001944 247 GWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNE 291 (993)
Q Consensus 247 GwSFVK~n~kYYddcA~iL~~~~l~~~~~~~~~~~p~~~p~~~~~ 291 (993)
||||||+|.+|||+||+|||.+||++++|++ ++||+.+.
T Consensus 288 g~~fvk~~~~yyd~~a~il~~~~~~~~~~~~------~~~~~~~~ 326 (330)
T 3t7a_A 288 GFSFVKNSMKYYDDCAKILGNIVMRELAPQF------HIPWSIPL 326 (330)
T ss_dssp ESCCCSSCHHHHHHHHHHHHHHHHHHHHHHH------TCCCCC--
T ss_pred CCccccCchhHHHHHHHHHHHHHHHHhCccc------CCcccCCC
Confidence 9999999999999999999999999999997 57776543
|
| >1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* | Back alignment and structure |
|---|
| >2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* | Back alignment and structure |
|---|
| >2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X | Back alignment and structure |
|---|
| >1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* | Back alignment and structure |
|---|
| >1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* | Back alignment and structure |
|---|
| >3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
| >3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} | Back alignment and structure |
|---|
| >1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A | Back alignment and structure |
|---|
| >3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* | Back alignment and structure |
|---|
| >1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* | Back alignment and structure |
|---|
| >4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A | Back alignment and structure |
|---|
| >2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* | Back alignment and structure |
|---|
| >1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* | Back alignment and structure |
|---|
| >2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 | Back alignment and structure |
|---|
| >3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} | Back alignment and structure |
|---|
| >2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* | Back alignment and structure |
|---|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
| >3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} | Back alignment and structure |
|---|
| >2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
| >2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* | Back alignment and structure |
|---|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
| >4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* | Back alignment and structure |
|---|
| >3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} | Back alignment and structure |
|---|
| >3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
| >2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A | Back alignment and structure |
|---|
| >2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A | Back alignment and structure |
|---|
| >2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* | Back alignment and structure |
|---|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
| >2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
| >3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} | Back alignment and structure |
|---|
| >3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
| >3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* | Back alignment and structure |
|---|
| >3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A | Back alignment and structure |
|---|
| >2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* | Back alignment and structure |
|---|
| >1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
| >2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} | Back alignment and structure |
|---|
| >3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
| >1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* | Back alignment and structure |
|---|
| >1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A | Back alignment and structure |
|---|
| >1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* | Back alignment and structure |
|---|
| >3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* | Back alignment and structure |
|---|
| >3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A | Back alignment and structure |
|---|
| >2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* | Back alignment and structure |
|---|
| >3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} | Back alignment and structure |
|---|
| >3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* | Back alignment and structure |
|---|
| >2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 | Back alignment and structure |
|---|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A | Back alignment and structure |
|---|
| >3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* | Back alignment and structure |
|---|
| >2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* | Back alignment and structure |
|---|
| >2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A | Back alignment and structure |
|---|
| >1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* | Back alignment and structure |
|---|
| >2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* | Back alignment and structure |
|---|
| >2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* | Back alignment and structure |
|---|
| >2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* | Back alignment and structure |
|---|
| >2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii} | Back alignment and structure |
|---|
| >3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* | Back alignment and structure |
|---|
| >1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A* | Back alignment and structure |
|---|
| >1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2 | Back alignment and structure |
|---|
| >2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A | Back alignment and structure |
|---|
| >3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A | Back alignment and structure |
|---|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A | Back alignment and structure |
|---|
| >3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} | Back alignment and structure |
|---|
| >3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* | Back alignment and structure |
|---|
| >3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* | Back alignment and structure |
|---|
| >2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 993 | ||||
| d1i7na2 | 206 | d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus nor | 2e-07 | |
| d1uc8a2 | 192 | d.142.1.7 (A:89-280) Lysine biosynthesis enzyme Ly | 4e-06 |
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Synapsin C-terminal domain domain: Synapsin II species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 32/231 (13%), Positives = 63/231 (27%), Gaps = 37/231 (16%)
Query: 45 NELEPQHLLHDRRKVYEQLEKY--GIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRF 102
N LE + D+ V+ Q+ + ++ L+ + +
Sbjct: 1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTL-----------P 49
Query: 103 WKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEF 162
P V K H +G G ++ +F V +Y E
Sbjct: 50 TFPVVVKIGHA-----------HSGMGKVKVENHY-----DFQDIASVVALTQTYATAEP 93
Query: 163 MPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCI 222
D++V +G Y G N + + + + +
Sbjct: 94 FIDAKYDIRVQKIGNNYKAYMRTSIS---GNWKTNTGSAMLEQIAMSDRYKLWVDACSEM 150
Query: 223 AFRQAVCGFDLLRCE-GRSYVCDVNGWSFVKNSYKYYDD----AACVLRKM 268
+C + + G+ Y+ +V S +D V+ KM
Sbjct: 151 FGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKM 201
|
| >d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Length = 192 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 993 | |||
| d1uc8a2 | 192 | Lysine biosynthesis enzyme LysX ATP-binding domain | 99.77 | |
| d1i7na2 | 206 | Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 | 99.72 | |
| d1gsaa2 | 192 | Prokaryotic glutathione synthetase, C-domain {Esch | 99.67 | |
| d1nd6a_ | 342 | Prostatic acid phosphatase {Human (Homo sapiens) [ | 99.25 | |
| d1e4ea2 | 211 | D-alanine:D-lactate ligase VanA, C-domain {Enteroc | 99.2 | |
| d1ehia2 | 228 | D-alanine:D-lactate ligase VanA, C-domain {Leucono | 99.16 | |
| d1iowa2 | 210 | D-ala-D-ala ligase, C-domain {Escherichia coli, ge | 99.11 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 98.9 | |
| d1vkza3 | 220 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 98.76 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 98.65 | |
| d3etja3 | 198 | N5-carboxyaminoimidazole ribonucleotide synthetase | 98.64 | |
| d2r85a2 | 235 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 98.51 | |
| d1qfxa_ | 447 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 98.5 | |
| d1a9xa5 | 275 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.46 | |
| d1kjqa3 | 206 | Glycinamide ribonucleotide transformylase PurT, do | 98.41 | |
| d1ulza3 | 214 | Biotin carboxylase (BC), domain 2 {Aquifex aeolicu | 98.41 | |
| d1a9xa6 | 259 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.32 | |
| d2r7ka2 | 238 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 98.31 | |
| d1gsoa3 | 224 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 98.23 | |
| d2j9ga3 | 216 | Biotin carboxylase (BC), domain 2 {Escherichia col | 98.15 | |
| d1w96a3 | 267 | Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye | 97.81 | |
| d1qwoa_ | 435 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 97.35 | |
| d1ihpa_ | 438 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 97.31 |
| >d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Lysine biosynthesis enzyme LysX ATP-binding domain domain: Lysine biosynthesis enzyme LysX ATP-binding domain species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=1.6e-18 Score=166.70 Aligned_cols=166 Identities=22% Similarity=0.269 Sum_probs=114.5
Q ss_pred HHHHHHHHHhCCCCCCCEEEEeccCCCccccccccccceeeecCeeccCcEEEeeccccCcceeEEeccCCCChHHHHHh
Q 001944 56 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 135 (993)
Q Consensus 56 R~~v~qiL~~~gIP~P~t~~~~r~~p~~~~~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfr 135 (993)
|+++++.|+++|||+|+|++++.. ++..++. ..+++|+|+||+.|. .|.|+..+..
T Consensus 1 K~~~~~~l~~~GipvP~t~~~~~~------------~~~~~~~-~~~g~P~ivKP~~g~-----------~g~gv~~~~~ 56 (192)
T d1uc8a2 1 KWATSVALAKAGLPQPKTALATDR------------EEALRLM-EAFGYPVVLKPVIGS-----------WGRLLAXXXX 56 (192)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH------------HHHHHHH-HHHCSSEEEECSBCC-----------BCSHHHHHHH
T ss_pred CHHHHHHHHHcCcCCCCEEEECCH------------HHHHHHH-HHhCCCEEEECCcCC-----------cccceeeccc
Confidence 678999999999999999999651 1222211 235689999999997 5666642222
Q ss_pred hcCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeeeCCCCCCeeeecCCCCceeeeeeCCHHHHH
Q 001944 136 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQ 215 (993)
Q Consensus 136 kign~sS~~~p~~~~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~vDG~vrrN~~gke~r~~v~Lt~eEk~ 215 (993)
.-....-....+......+..+|+||||+....|++|+++|++++++..|+.+ .++.+........+..+.++...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~lvqefi~g~~~~~~v~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 132 (192)
T d1uc8a2 57 XXXXXXXXXXKEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRSA----HWITNTARGGQAENCPLTEEVAR 132 (192)
T ss_dssp HHC------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHHHH
T ss_pred cccchhhHHHHHHHhccCCCCEEEEEecCCCCeeEEEEEECCEEEeEEEeeec----ccccccccccccccccchhhhhh
Confidence 11111111111111223566799999999877899999999999999999874 35556666777778999999999
Q ss_pred HHHHHHHHhCCceeEEEEEeeCCCcEEEeccCcc
Q 001944 216 MAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWS 249 (993)
Q Consensus 216 iA~ka~~afgq~VcGfDLLRs~g~syV~DVNGwS 249 (993)
++.+++++++..+||||++.+++++||+|||.-.
T Consensus 133 ~~~~~~~~~~~g~~~vD~~~~~~~~~vlEiN~r~ 166 (192)
T d1uc8a2 133 LSVKAAEAVGGGVVAVDLFESERGLLVNEVNHTM 166 (192)
T ss_dssp HHHHHHHHTTCSEEEEEEEEETTEEEEEEEETTC
T ss_pred hhhhHHHhhhccccceEEEecCCCEEEEEEcCCC
Confidence 9999999999999999999999999999999654
|
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
| >d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} | Back information, alignment and structure |
|---|
| >d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} | Back information, alignment and structure |
|---|