Citrus Sinensis ID: 002020
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 980 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LPK5 | 985 | Cellulose synthase A cata | yes | no | 0.993 | 0.988 | 0.823 | 0.0 | |
| Q5JN63 | 989 | Cellulose synthase A cata | yes | no | 0.985 | 0.976 | 0.757 | 0.0 | |
| A2WV32 | 989 | Cellulose synthase A cata | N/A | no | 0.985 | 0.976 | 0.757 | 0.0 | |
| Q84JA6 | 1049 | Cellulose synthase A cata | no | no | 0.987 | 0.922 | 0.635 | 0.0 | |
| Q9SWW6 | 1026 | Cellulose synthase A cata | no | no | 0.957 | 0.914 | 0.632 | 0.0 | |
| Q941L0 | 1065 | Cellulose synthase A cata | no | no | 0.981 | 0.903 | 0.618 | 0.0 | |
| Q69P51 | 1055 | Cellulose synthase A cata | no | no | 0.963 | 0.894 | 0.629 | 0.0 | |
| A2Z1C8 | 1055 | Cellulose synthase A cata | N/A | no | 0.963 | 0.894 | 0.629 | 0.0 | |
| Q84ZN6 | 1081 | Probable cellulose syntha | no | no | 0.908 | 0.823 | 0.674 | 0.0 | |
| O48946 | 1081 | Cellulose synthase A cata | no | no | 0.920 | 0.834 | 0.682 | 0.0 |
| >sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1686 bits (4365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/991 (82%), Positives = 900/991 (90%), Gaps = 17/991 (1%)
Query: 1 MMQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
MM+S +P+CNTCG+++G +NGE FVAC EC+FPICK+C + E KEGR+ CLRC +PYDE
Sbjct: 1 MMESRSPICNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRICLRCGNPYDE 60
Query: 61 NLLDDVGTKEPGNRSTMAAQLSN-SENTGIHARHISNVSTVDSEYNDESGNPIWKNRVES 119
N+ DDV TK +S + Q +N S+++GIHARHIS VST+DSE NDE GNPIWKNRVES
Sbjct: 61 NVFDDVETKTSKTQSIVPTQTNNTSQDSGIHARHISTVSTIDSELNDEYGNPIWKNRVES 120
Query: 120 WKDKKNKKKKT------AAKAEK-EAEVPPAQQMEENQQSPEAALP--LSTLIPVPRSKL 170
WKDKK+KK K A KAE+ EA++P Q ME+ + E+ LS +IP+PR+K+
Sbjct: 121 WKDKKDKKSKKKKKDPKATKAEQHEAQIPTQQHMEDTPPNTESGATDVLSVVIPIPRTKI 180
Query: 171 GPYRTVIIVRLIILGLFFHYRVTHPVDSALGLWLTSVICEIWFAFSWVLDQFPKWSPVDR 230
YR VII+RLIIL LFF+YR+THPVDSA GLWLTSVICEIWFA SWVLDQFPKWSP++R
Sbjct: 181 TSYRIVIIMRLIILALFFNYRITHPVDSAYGLWLTSVICEIWFAVSWVLDQFPKWSPINR 240
Query: 231 ETYIDRLSARFEREGEPSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY 290
ETYIDRLSARFEREGE S+LAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY
Sbjct: 241 ETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY 300
Query: 291 VSDDGAAMLTFETLVQTADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKIQPSFVKE 350
VSDDGAAML+FE+LV+TADFARKWVPFCKK+SIEPRAPEFYFS KIDYL+DK+QPSFVKE
Sbjct: 301 VSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKE 360
Query: 351 RRAMKRDYEEYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGHSGAC 410
RRAMKRDYEE+K+R+NALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLG+SGA
Sbjct: 361 RRAMKRDYEEFKIRMNALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGYSGAR 420
Query: 411 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKA 470
DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAP+ILNLDCDHYVNNSKA
Sbjct: 421 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKA 480
Query: 471 VREAMCFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPMYVG 530
VREAMCF+MDP VG+DVC+VQFPQRFDGIDKSDRYANRNIVFFDVNM+GLDGIQGP+YVG
Sbjct: 481 VREAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVG 540
Query: 531 TGCMFNRQALYGYGPPTMP-TLPKTSSSCSWCGCCSCCCPSKKPSKDLSEAYRDAKREEL 589
TG +F RQALYGY PP+ P LP++SSS CC KK +D SE Y+DAKREEL
Sbjct: 541 TGTVFRRQALYGYSPPSKPRILPQSSSSSC------CCLTKKKQPQDPSEIYKDAKREEL 594
Query: 590 DAAIFNLKEIDNYDDYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPDSANPSTLIKE 649
DAAIFNL ++DNYD+Y+RSMLISQ SFEKTFGLS+VFIESTLMENGGVPDS NPSTLIKE
Sbjct: 595 DAAIFNLGDLDNYDEYDRSMLISQTSFEKTFGLSTVFIESTLMENGGVPDSVNPSTLIKE 654
Query: 650 AIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPIN 709
AIHVISCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWRS+YCMPLRPAFKGSAPIN
Sbjct: 655 AIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPIN 714
Query: 710 LSDRLHQVLRWALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYC 769
LSDRLHQVLRWALGSVEIFLSRHCPLWYG GGRLKLLQRLAYINTIVYPFTSLPL+AYC
Sbjct: 715 LSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYC 774
Query: 770 SLPAICLLTGKFIIPTLSNLASVLFLGLFLSIIATSVLELRWSGVTIEDLWRNEQFWVIG 829
+LPAICLLTGKFIIPTLSNLAS+LFLGLF+SII TSVLELRWSGV+IEDLWRNEQFWVIG
Sbjct: 775 TLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIG 834
Query: 830 GVSAHLFAVFQGFLKMLAGLDTNFTVTSKAADDLEFGELYIIKWTTLLIPPTSLIIVNMV 889
GVSAHLFAVFQGFLKMLAGLDTNFTVTSK ADDLEFGELYI+KWTTLLIPPTSL+I+N+V
Sbjct: 835 GVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSLLIINLV 894
Query: 890 GVVAGFSDALNKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLA 949
GVVAGFSDALNKGYEAWGPLFGKVFFAFWVI+HLYPFLKGLMGRQNRTPTIV+LWS+LLA
Sbjct: 895 GVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLA 954
Query: 950 SVFSLVWVKIDPFVEKTNSATLGQTCISIDC 980
SVFSLVWV+I+PFV KT++ +L C+ IDC
Sbjct: 955 SVFSLVWVRINPFVSKTDTTSLSLNCLLIDC 985
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Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q5JN63|CESA4_ORYSJ Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2WV32|CESA4_ORYSI Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q84ZN6|CESA8_ORYSJ Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1 | Back alignment and function description |
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| >sp|O48946|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 980 | ||||||
| 324984027 | 974 | cellulose synthase A1 [Gossypium barbade | 0.992 | 0.998 | 0.875 | 0.0 | |
| 345103995 | 974 | cellulose synthase [Gossypium thurberi] | 0.992 | 0.998 | 0.875 | 0.0 | |
| 345104001 | 974 | cellulose synthase [Gossypium turneri] | 0.992 | 0.998 | 0.875 | 0.0 | |
| 324984035 | 974 | cellulose synthase A1 [Gossypium hirsutu | 0.992 | 0.998 | 0.874 | 0.0 | |
| 345104027 | 974 | cellulose synthase [Gossypium armourianu | 0.992 | 0.998 | 0.874 | 0.0 | |
| 345104011 | 974 | cellulose synthase [Gossypium tomentosum | 0.992 | 0.998 | 0.873 | 0.0 | |
| 188509978 | 973 | cellulose synthase [Gossypium arboreum] | 0.991 | 0.998 | 0.875 | 0.0 | |
| 54112376 | 978 | cellulose synthase [Populus tremula x Po | 0.996 | 0.998 | 0.858 | 0.0 | |
| 345104035 | 974 | cellulose synthase [Gossypium aridum] gi | 0.992 | 0.998 | 0.873 | 0.0 | |
| 429326452 | 978 | cellulose synthase [Populus tomentosa] | 0.996 | 0.998 | 0.853 | 0.0 |
| >gi|324984027|gb|ADY68796.1| cellulose synthase A1 [Gossypium barbadense] gi|324984031|gb|ADY68798.1| cellulose synthase A1 [Gossypium herbaceum subsp. africanum] gi|345104003|gb|AEN70823.1| cellulose synthase [Gossypium mustelinum] gi|345104015|gb|AEN70829.1| cellulose synthase [Gossypium barbadense var. brasiliense] gi|345104019|gb|AEN70831.1| cellulose synthase [Gossypium barbadense var. peruvianum] | Back alignment and taxonomy information |
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Score = 1745 bits (4519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 859/981 (87%), Positives = 924/981 (94%), Gaps = 8/981 (0%)
Query: 1 MMQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
MM+SG PVC+TCG+ VG NGE FVAC ECNFPICKSCF+ ++KEGRKACLRC SPYDE
Sbjct: 1 MMESGVPVCHTCGEHVGLNVNGEPFVACHECNFPICKSCFEYDLKEGRKACLRCGSPYDE 60
Query: 61 NLLDDVGTKEPGNRSTMAAQLSNSENTGIHARHISNVSTVDSEYNDESGNPIWKNRVESW 120
NLLDDV K G++STMAA LS S++ GIHARHIS+VST+DSE +++GNPIWKNRVESW
Sbjct: 61 NLLDDV-EKATGDQSTMAAHLSKSQDVGIHARHISSVSTLDSEMTEDNGNPIWKNRVESW 119
Query: 121 KDKKNKKKKTAA-KAEKEAEVPPAQQMEENQQSPEAALPLSTLIPVPRSKLGPYRTVIIV 179
K+KKNKKKK A K E+EAE+PP QQME+ + +P+A+ PLST+IP+P+S+L PYRTVII+
Sbjct: 120 KEKKNKKKKPATTKVEREAEIPPEQQMED-KPAPDASQPLSTIIPIPKSRLAPYRTVIIM 178
Query: 180 RLIILGLFFHYRVTHPVDSALGLWLTSVICEIWFAFSWVLDQFPKWSPVDRETYIDRLSA 239
RLIILGLFFHYRVT+PVDSA GLWLTSVICEIWFAFSWVLDQFPKW PV+RETYIDRLSA
Sbjct: 179 RLIILGLFFHYRVTNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWYPVNRETYIDRLSA 238
Query: 240 RFEREGEPSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAML 299
R+EREGEP+ELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY+SDDGAAML
Sbjct: 239 RYEREGEPNELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYISDDGAAML 298
Query: 300 TFETLVQTADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKRDYE 359
TFE+LV+TADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDK+QPSFVKERRAMKRDYE
Sbjct: 299 TFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYE 358
Query: 360 EYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGHSGACDIEGNELPR 419
EYK+RINALVAKAQKTPEEGWTMQDGT WPGNN RDHPGMIQVFLG+SGA DIEGNELPR
Sbjct: 359 EYKIRINALVAKAQKTPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGYSGARDIEGNELPR 418
Query: 420 LVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFMM 479
LVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAP+ILNLDCDHYVNNSKAVREAMCF+M
Sbjct: 419 LVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLM 478
Query: 480 DPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPMYVGTGCMFNRQA 539
DPQVGRDVCYVQFPQRFDGID+SDRYANRN VFFDVNMKGLDGIQGP+YVGTGC+FNRQA
Sbjct: 479 DPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQA 538
Query: 540 LYGYGPPTMPTLPKTSSSCSWCGCCSCCCPSKKPSKDLSEAYRDAKREELDAAIFNLKEI 599
LYGYGPP+MP+ PK+SSS SCCCP KK KD SE YRDAKREELDAAIFNL+EI
Sbjct: 539 LYGYGPPSMPSFPKSSSSSC-----SCCCPGKKEPKDPSELYRDAKREELDAAIFNLREI 593
Query: 600 DNYDDYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPDSANPSTLIKEAIHVISCGYE 659
DNYD+YERSMLISQ SFEKTFGLSSVFIESTLMENGGV +SANPSTLIKEAIHVISCGYE
Sbjct: 594 DNYDEYERSMLISQTSFEKTFGLSSVFIESTLMENGGVAESANPSTLIKEAIHVISCGYE 653
Query: 660 EKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPINLSDRLHQVLR 719
EKT WGKEIGWIYGSVTEDILTGFKMHCRGWRS+YCMPLRPAFKGSAPINLSDRLHQVLR
Sbjct: 654 EKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLR 713
Query: 720 WALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYCSLPAICLLTG 779
WALGSVEIFLSRHCPLWYGFGGGRLK LQRLAYINTIVYPFTSLPLIAYCSLPAICLLTG
Sbjct: 714 WALGSVEIFLSRHCPLWYGFGGGRLKWLQRLAYINTIVYPFTSLPLIAYCSLPAICLLTG 773
Query: 780 KFIIPTLSNLASVLFLGLFLSIIATSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVF 839
KFIIPTLSNLASVLFLGLFLSII T+VLELRWSGV+IEDLWRNEQFWVIGGVSAHLFAVF
Sbjct: 774 KFIIPTLSNLASVLFLGLFLSIIVTAVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVF 833
Query: 840 QGFLKMLAGLDTNFTVTSKAADDLEFGELYIIKWTTLLIPPTSLIIVNMVGVVAGFSDAL 899
QGFLKMLAG+DTNFTVT+KAADD +FGELYI+KWTTLLIPPT+L+IVNMVGVVAGFSDAL
Sbjct: 834 QGFLKMLAGIDTNFTVTAKAADDADFGELYIVKWTTLLIPPTTLLIVNMVGVVAGFSDAL 893
Query: 900 NKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKI 959
NKGYEAWGPLFGKVFF+FWVI+HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWV+I
Sbjct: 894 NKGYEAWGPLFGKVFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVRI 953
Query: 960 DPFVEKTNSATLGQTCISIDC 980
+PFV +S T+ Q+CISIDC
Sbjct: 954 NPFVSTADSTTVSQSCISIDC 974
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Source: Gossypium barbadense Species: Gossypium barbadense Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345103995|gb|AEN70819.1| cellulose synthase [Gossypium thurberi] gi|345104041|gb|AEN70842.1| cellulose synthase [Gossypium trilobum] | Back alignment and taxonomy information |
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| >gi|345104001|gb|AEN70822.1| cellulose synthase [Gossypium turneri] | Back alignment and taxonomy information |
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| >gi|324984035|gb|ADY68800.1| cellulose synthase A1 [Gossypium hirsutum] gi|345104023|gb|AEN70833.1| cellulose synthase [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
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| >gi|345104027|gb|AEN70835.1| cellulose synthase [Gossypium armourianum] gi|345104029|gb|AEN70836.1| cellulose synthase [Gossypium harknessii] | Back alignment and taxonomy information |
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| >gi|345104011|gb|AEN70827.1| cellulose synthase [Gossypium tomentosum] | Back alignment and taxonomy information |
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| >gi|188509978|gb|ACD56660.1| cellulose synthase [Gossypium arboreum] | Back alignment and taxonomy information |
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| >gi|54112376|gb|AAT09896.2| cellulose synthase [Populus tremula x Populus tremuloides] | Back alignment and taxonomy information |
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| >gi|345104035|gb|AEN70839.1| cellulose synthase [Gossypium aridum] gi|345104039|gb|AEN70841.1| cellulose synthase [Gossypium lobatum] | Back alignment and taxonomy information |
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| >gi|429326452|gb|AFZ78566.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 980 | ||||||
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.993 | 0.988 | 0.803 | 0.0 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.918 | 0.832 | 0.671 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.882 | 0.812 | 0.683 | 0.0 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.813 | 0.776 | 0.731 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.832 | 0.766 | 0.707 | 0.0 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.838 | 0.755 | 0.692 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.873 | 0.789 | 0.666 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.881 | 0.808 | 0.655 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.881 | 0.797 | 0.653 | 0.0 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.439 | 0.410 | 0.709 | 0.0 |
| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4269 (1507.8 bits), Expect = 0., P = 0.
Identities = 796/991 (80%), Positives = 876/991 (88%)
Query: 1 MMQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
MM+S +P+CNTCG+++G +NGE FVAC EC+FPICK+C + E KEGR+ CLRC +PYDE
Sbjct: 1 MMESRSPICNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRICLRCGNPYDE 60
Query: 61 NLLDDVGTKEPGNRSTMAAQLSN-SENTGIHARHISNVSTVDSEYNDESGNPIWKNRVES 119
N+ DDV TK +S + Q +N S+++GIHARHIS VST+DSE NDE GNPIWKNRVES
Sbjct: 61 NVFDDVETKTSKTQSIVPTQTNNTSQDSGIHARHISTVSTIDSELNDEYGNPIWKNRVES 120
Query: 120 WXXXXXXXXX-------XXXXXXXXXXVPPAQQMEENQQSPEAALP--LSTLIPVPRSKL 170
W +P Q ME+ + E+ LS +IP+PR+K+
Sbjct: 121 WKDKKDKKSKKKKKDPKATKAEQHEAQIPTQQHMEDTPPNTESGATDVLSVVIPIPRTKI 180
Query: 171 GPYRTVIIVRLIILGLFFHYRVTHPVDSALGLWLTSVICEIWFAFSWVLDQFPKWSPVDR 230
YR VII+RLIIL LFF+YR+THPVDSA GLWLTSVICEIWFA SWVLDQFPKWSP++R
Sbjct: 181 TSYRIVIIMRLIILALFFNYRITHPVDSAYGLWLTSVICEIWFAVSWVLDQFPKWSPINR 240
Query: 231 ETYIDRLSARFEREGEPSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY 290
ETYIDRLSARFEREGE S+LAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY
Sbjct: 241 ETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCY 300
Query: 291 VSDDGAAMLTFETLVQTADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKIQPSFVKE 350
VSDDGAAML+FE+LV+TADFARKWVPFCKK+SIEPRAPEFYFS KIDYL+DK+QPSFVKE
Sbjct: 301 VSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKE 360
Query: 351 RRAMKRDYEEYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGHSGAC 410
RRAMKRDYEE+K+R+NALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLG+SGA
Sbjct: 361 RRAMKRDYEEFKIRMNALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGYSGAR 420
Query: 411 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKA 470
DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAP+ILNLDCDHYVNNSKA
Sbjct: 421 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKA 480
Query: 471 VREAMCFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPMYVG 530
VREAMCF+MDP VG+DVC+VQFPQRFDGIDKSDRYANRNIVFFDVNM+GLDGIQGP+YVG
Sbjct: 481 VREAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVG 540
Query: 531 TGCMFNRQALYGYGPPTMPT-LPKTXXXXXXXXXXXXXXXXXXXXXDLSEAYRDAKREEL 589
TG +F RQALYGY PP+ P LP++ D SE Y+DAKREEL
Sbjct: 541 TGTVFRRQALYGYSPPSKPRILPQSSSSSCCCLTKKKQPQ------DPSEIYKDAKREEL 594
Query: 590 DAAIFNLKEIDNYDDYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPDSANPSTLIKE 649
DAAIFNL ++DNYD+Y+RSMLISQ SFEKTFGLS+VFIESTLMENGGVPDS NPSTLIKE
Sbjct: 595 DAAIFNLGDLDNYDEYDRSMLISQTSFEKTFGLSTVFIESTLMENGGVPDSVNPSTLIKE 654
Query: 650 AIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPIN 709
AIHVISCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWRS+YCMPLRPAFKGSAPIN
Sbjct: 655 AIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPIN 714
Query: 710 LSDRLHQVLRWALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYC 769
LSDRLHQVLRWALGSVEIFLSRHCPLWYG GGRLKLLQRLAYINTIVYPFTSLPL+AYC
Sbjct: 715 LSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYC 774
Query: 770 SLPAICLLTGKFIIPTLSNLASVLFLGLFLSIIATSVLELRWSGVTIEDLWRNEQFWVIG 829
+LPAICLLTGKFIIPTLSNLAS+LFLGLF+SII TSVLELRWSGV+IEDLWRNEQFWVIG
Sbjct: 775 TLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIG 834
Query: 830 GVSAHLFAVFQGFLKMLAGLDTNFTVTSKAADDLEFGELYIIKWTTLLIPPTSLIIVNMV 889
GVSAHLFAVFQGFLKMLAGLDTNFTVTSK ADDLEFGELYI+KWTTLLIPPTSL+I+N+V
Sbjct: 835 GVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSLLIINLV 894
Query: 890 GVVAGFSDALNKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLA 949
GVVAGFSDALNKGYEAWGPLFGKVFFAFWVI+HLYPFLKGLMGRQNRTPTIV+LWS+LLA
Sbjct: 895 GVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLA 954
Query: 950 SVFSLVWVKIDPFVEKTNSATLGQTCISIDC 980
SVFSLVWV+I+PFV KT++ +L C+ IDC
Sbjct: 955 SVFSLVWVRINPFVSKTDTTSLSLNCLLIDC 985
|
|
| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6709 | 0.9091 | 0.8303 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6296 | 0.9632 | 0.8947 | N/A | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.7168 | 0.8755 | 0.7973 | N/A | no |
| A2WV32 | CESA4_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.7577 | 0.9857 | 0.9767 | N/A | no |
| Q8LPK5 | CESA8_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.8234 | 0.9938 | 0.9888 | yes | no |
| Q5JN63 | CESA4_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7577 | 0.9857 | 0.9767 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.12 | 0.994 |
| 3rd Layer | 2.4.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 980 | |||
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-134 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-102 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 2e-55 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 5e-14 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 4e-12 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 6e-12 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 2e-11 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 5e-11 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 5e-11 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-10 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 7e-07 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-04 | |
| TIGR03937 | 407 | TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu | 4e-04 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 0.001 |
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
Score = 1982 bits (5135), Expect = 0.0
Identities = 846/982 (86%), Positives = 920/982 (93%), Gaps = 7/982 (0%)
Query: 1 MMQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
MM+SGAP+C TCG++VG +NGE FVAC EC++P+CK+C + EIKEGRK CLRC PYD
Sbjct: 1 MMESGAPICATCGEEVGVDSNGEAFVACHECSYPLCKACLEYEIKEGRKVCLRCGGPYDA 60
Query: 61 -NLLDDVGTKEPGNRSTMAAQLSNSENTGIHARHISNVSTVDSEYNDESGNPIWKNRVES 119
N+ DDV TK N+STMA+ L+++++ GIHARHIS+VSTVDSE NDE GNPIWKNRVES
Sbjct: 61 ENVFDDVETKHSRNQSTMASHLNDTQDVGIHARHISSVSTVDSELNDEYGNPIWKNRVES 120
Query: 120 WKDKKNKKKKTAAKAEK-EAEVPPAQQMEENQQSPEAALPLSTLIPVPRSKLGPYRTVII 178
WKDKKNKKKK+A K E +A++PP QQMEE + S +A PLS +IP+PR+KL PYR VII
Sbjct: 121 WKDKKNKKKKSAKKKEAHKAQIPPEQQMEE-KPSADAYEPLSRVIPIPRNKLTPYRAVII 179
Query: 179 VRLIILGLFFHYRVTHPVDSALGLWLTSVICEIWFAFSWVLDQFPKWSPVDRETYIDRLS 238
+RLIILGLFFHYR+T+PVDSA GLWLTSVICEIWFAFSWVLDQFPKWSP++RETYIDRLS
Sbjct: 180 MRLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLS 239
Query: 239 ARFEREGEPSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAM 298
AR+EREGEPS+LAAVDFFVSTVDPLKEPPLITANTVLSILA+DYPVDKVSCYVSDDGAAM
Sbjct: 240 ARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAM 299
Query: 299 LTFETLVQTADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKRDY 358
L+FE+LV+TA+FARKWVPFCKK+SIEPRAPEFYFSQKIDYLKDK+QPSFVKERRAMKRDY
Sbjct: 300 LSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDY 359
Query: 359 EEYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGHSGACDIEGNELP 418
EEYKVR+NALVAKAQKTPEEGWTMQDGT WPGNNTRDHPGMIQVFLG +GA DIEGNELP
Sbjct: 360 EEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELP 419
Query: 419 RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFM 478
RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCF+
Sbjct: 420 RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFL 479
Query: 479 MDPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPMYVGTGCMFNRQ 538
MDP VGRDVCYVQFPQRFDGID+SDRYANRN+VFFDVNMKGLDGIQGP+YVGTGC+FNRQ
Sbjct: 480 MDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQ 539
Query: 539 ALYGYGPPTMPTLPKTSSSCSWCGCCSCCCPSKKPSKDLSEAYRDAKREELDAAIFNLKE 598
ALYGYGPP++P LPK SSS S CC KKP +D SE YRDAKRE+L+AAIFNL+E
Sbjct: 540 ALYGYGPPSLPRLPK-SSSSSS---SCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLRE 595
Query: 599 IDNYDDYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPDSANPSTLIKEAIHVISCGY 658
IDNYD+YERSMLISQMSFEKTFGLSSVFIESTLMENGGVP+SANPSTLIKEAIHVISCGY
Sbjct: 596 IDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGY 655
Query: 659 EEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPINLSDRLHQVL 718
EEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRS+YCMP+RPAFKGSAPINLSDRLHQVL
Sbjct: 656 EEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVL 715
Query: 719 RWALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYCSLPAICLLT 778
RWALGSVEIFLSRHCPLWYG+GGGRLK LQRLAYINTIVYPFTSLPLIAYC+LPAICLLT
Sbjct: 716 RWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLT 775
Query: 779 GKFIIPTLSNLASVLFLGLFLSIIATSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAV 838
GKFIIPTLSNLAS+LFLGLF+SII TSVLELRWSGV+IEDLWRNEQFWVIGGVSAHLFAV
Sbjct: 776 GKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAV 835
Query: 839 FQGFLKMLAGLDTNFTVTSKAADDLEFGELYIIKWTTLLIPPTSLIIVNMVGVVAGFSDA 898
FQGFLKMLAGLDTNFTVT+KAADD EFGELY++KWTTLLIPPTSL+I+N+VGVVAGFSDA
Sbjct: 836 FQGFLKMLAGLDTNFTVTAKAADDTEFGELYMVKWTTLLIPPTSLLIINLVGVVAGFSDA 895
Query: 899 LNKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVK 958
LNKGYEAWGPLFGKVFFAFWVI+HLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVK
Sbjct: 896 LNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVK 955
Query: 959 IDPFVEKTNSATLGQTCISIDC 980
I+PFV KT++ TL CISIDC
Sbjct: 956 INPFVGKTDTTTLSNNCISIDC 977
|
Length = 977 |
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 980 | |||
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.97 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 99.97 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.97 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.96 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.96 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.94 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.93 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.93 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.92 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.91 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.9 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.88 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.84 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.84 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.82 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.82 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.81 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.78 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.76 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.75 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.74 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.67 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.65 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.53 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.39 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.37 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.3 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.28 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.19 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.14 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 99.13 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.13 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.09 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.09 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.07 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.05 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.02 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.99 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.96 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.95 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.93 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.92 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.85 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.71 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.7 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.62 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.61 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.57 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.56 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 98.44 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 98.4 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.36 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.34 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.29 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.25 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 98.07 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 97.51 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 97.23 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 97.12 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 96.92 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.42 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 95.21 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 95.07 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 94.98 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 94.49 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 90.05 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 89.46 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 87.83 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 87.05 |
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-290 Score=2548.04 Aligned_cols=974 Identities=65% Similarity=1.212 Sum_probs=891.0
Q ss_pred CCCCCcccccCCCccccCCCCeeecCCCCCCCcccchHHHHHhhcCccCCCCCCCCC-------------CCcccccCCC
Q 002020 3 QSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYD-------------ENLLDDVGTK 69 (980)
Q Consensus 3 ~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~FpvCr~Cyeye~~eG~~~CP~Ckt~Y~-------------e~~~dd~~~~ 69 (980)
+.++|+||||||+||+|+|||+|||||||+|||||||||||||||+|+||||||+|+ |+|+||+|||
T Consensus 33 ~~~~~iCqICGD~Vg~t~dGe~FVACn~C~fpvCr~Cyeyer~eg~~~Cpqckt~Y~r~kgs~~~~~d~ee~~~dd~e~e 112 (1094)
T PLN02436 33 ELSGQTCQICGDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENE 112 (1094)
T ss_pred ccCCccccccccccCcCCCCCEEEeeccCCCccccchhhhhhhcCCccCcccCCchhhccCCCCcCCccccccchhhhhh
Confidence 467899999999999999999999999999999999999999999999999999993 6678999999
Q ss_pred CCCCCC-----c----c-ccccc-----------------------------CCCC-C---Ccc-cC----------Cc-
Q 002020 70 EPGNRS-----T----M-AAQLS-----------------------------NSEN-T---GIH-AR----------HI- 94 (980)
Q Consensus 70 ~~~~~~-----~----~-~~~~~-----------------------------~~~~-~---~~~-~~----------~~- 94 (980)
||+... . | +++++ ++|. + .+| +. .+
T Consensus 113 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1094)
T PLN02436 113 FDYGNNGLDPEQVAEAMLSSRLNTGRHSNVSGIATPSELDSAPPGSQIPLLTYGEEDVEISSDRHALIVPPSTGHGNRVH 192 (1094)
T ss_pred hcCcccccchHHHHHHHhhhhcccCccccccccccccccccCCCcCCCcccccCcccCccCCcccccccCCccccccccc
Confidence 987511 0 1 11111 1110 1 122 11 11
Q ss_pred ----------cCCcccCCCCC---CCCCccccchhhhHHHhhhhhhhhhcccc-c-cccCCC-CCCCcccccCCCccCCC
Q 002020 95 ----------SNVSTVDSEYN---DESGNPIWKNRVESWKDKKNKKKKTAAKA-E-KEAEVP-PAQQMEENQQSPEAALP 158 (980)
Q Consensus 95 ----------~~~~~~~~~~~---~~~g~~~w~~~~~~~k~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~p 158 (980)
.+.+.+||+++ |||||++||||||+||+||+|+.++.... + .+++++ ++.+++|++++|++++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 272 (1094)
T PLN02436 193 PMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQP 272 (1094)
T ss_pred ccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCcccccccccCCC
Confidence 23457899999 89999999999999999999554432221 1 112332 33346788889999999
Q ss_pred CceeeecCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhHhHhh
Q 002020 159 LSTLIPVPRSKLGPYRTVIIVRLIILGLFFHYRVTHPVDSALGLWLTSVICEIWFAFSWVLDQFPKWSPVDRETYIDRLS 238 (980)
Q Consensus 159 l~~~~~~~~~~~~~~R~~~~~~l~~l~~~l~~R~~~~~~~~~~lwl~~~~~E~~f~~~wil~~~~kw~pv~r~~~~d~L~ 238 (980)
|+||+++++++++|||++++++|+++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||+
T Consensus 273 L~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~ 352 (1094)
T PLN02436 273 LSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLS 352 (1094)
T ss_pred ceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCceeEEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEecCCCcchhhHHHHhhHHhhhhhhhhh
Q 002020 239 ARFEREGEPSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLTFETLVQTADFARKWVPFC 318 (980)
Q Consensus 239 ~~~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDg~~~ltf~al~E~~~fa~~WvpfC 318 (980)
+|||+|+++++||+|||||+|+||.||||++|+||||||||+|||+|||+|||||||+|+||||||.|||+|||+|||||
T Consensus 353 ~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFC 432 (1094)
T PLN02436 353 LRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFC 432 (1094)
T ss_pred HHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCcccccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCcc
Q 002020 319 KKFSIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPG 398 (980)
Q Consensus 319 kk~~iepr~Pe~YF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~ 398 (980)
|||+||||+||+||++|.|+++++++|+|++|||+|||||||||+|||+|+++++++|+++|.|+|||+|||++++|||+
T Consensus 433 kK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~ 512 (1094)
T PLN02436 433 KKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPG 512 (1094)
T ss_pred cccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecCCCCCCCcCCCCCcEEEEecccCCCCCCCCchhhHHHHHHhccccCCCCEEEEecCCCCCCchHHHHHHHhhh
Q 002020 399 MIQVFLGHSGACDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFM 478 (980)
Q Consensus 399 iiqv~l~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGalNallrvsa~~tng~~il~lD~D~~i~~~~~Lr~amcff 478 (980)
|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||+|||||||||||||||+|||+++|+|||||
T Consensus 513 IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfl 592 (1094)
T PLN02436 513 MIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFM 592 (1094)
T ss_pred ceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhh
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEEEccCccccCCCccchhhhhhhhhhhhhccccccCCCccccccccchhhhhhccCCCCCCCCCCCCCCCC
Q 002020 479 MDPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPMYVGTGCMFNRQALYGYGPPTMPTLPKTSSSC 558 (980)
Q Consensus 479 ~Dp~~g~~v~~VQ~PQ~F~n~d~~dr~~n~~~vFfdi~~~gldg~qgp~yvGTg~~~RR~ALyg~~p~~~~~~~~~~~~~ 558 (980)
|||+.|+++|||||||+|+|+|++|||+|||+||||++|+|+||+|||+|+||||+|||+||||++||...+.+...++|
T Consensus 593 lD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~ 672 (1094)
T PLN02436 593 MDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNC 672 (1094)
T ss_pred cCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999776666667789
Q ss_pred CCCCCCCCCCCCCCCCcchhhHhhhhhhhhHHHHhhhhhhcccc---chhhHhHhhhhhhhhhccCchHHHHHHHHHhcC
Q 002020 559 SWCGCCSCCCPSKKPSKDLSEAYRDAKREELDAAIFNLKEIDNY---DDYERSMLISQMSFEKTFGLSSVFIESTLMENG 635 (980)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~fG~s~~~~~Sal~e~G 635 (980)
|++|||+|||..++++++.+....+.++.+...+++++++++++ .+.+++.+++++.++++||+|.+|++|++++.|
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~ 752 (1094)
T PLN02436 673 WPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENG 752 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhc
Confidence 99999988875444322221111112222333345556666543 344777788999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEecCCCCceecccCCCHHHHHH
Q 002020 636 GVPDSANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPINLSDRLH 715 (980)
Q Consensus 636 G~~~~~~~~~~~~ea~~v~sC~Ye~~T~wGkevGW~y~sITED~~tg~rL~~~GwrsvY~~p~ra~~~G~aP~tl~~~l~ 715 (980)
|.+.+.+.+++++||+|||||+||++|+||+||||+|+|+|||+.||++||++|||++|++|++++|.|+||+|+.+++.
T Consensus 753 ~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~ 832 (1094)
T PLN02436 753 GVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLH 832 (1094)
T ss_pred CCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHH
Confidence 99988888999999999999999999999999999999999999999999999999999988878899999999999999
Q ss_pred HHHHhhchhHHHHHhhcCccccccCCCCCChhhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHhCCccccccchHHHHHHH
Q 002020 716 QVLRWALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASVLFL 795 (980)
Q Consensus 716 QR~RWa~G~lQil~sk~~Pl~~~~~~grL~~~QRL~Yl~~~lypl~sl~~liy~llPil~LltG~~iiP~~s~~~~~~fl 795 (980)
||+|||+|++||++++++|+++|+. ++|+++||++|+++++||+++++.++|+++|++||++|++++|.++.+++++|+
T Consensus 833 Qr~RWA~G~lQIffsr~nPl~~g~~-~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi 911 (1094)
T PLN02436 833 QVLRWALGSVEIFLSRHCPIWYGYG-GGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFM 911 (1094)
T ss_pred HHHHHhhcceeeeeccCCcchhccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHH
Confidence 9999999999999999999997663 459999999999999999999999999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHhhhccCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCcccccccceeeecccc
Q 002020 796 GLFLSIIATSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKAADDLEFGELYIIKWTT 875 (980)
Q Consensus 796 ~lfls~~~~~lLe~~w~G~s~~~wWr~e~~W~I~~vsa~l~av~~allk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~ 875 (980)
++|++++++++||++|+|+++++||||||||+|+++|+|+||++++++|+|++++++|.||+|..++++++++|.|+|++
T Consensus 912 ~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~~a~ly~f~~S~ 991 (1094)
T PLN02436 912 ALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTS 991 (1094)
T ss_pred HHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccccccccceeeeccee
Confidence 99999999999999999999999999999999999999999999999999999999999999988776778999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCceeehHHHHHHHHHHHHhh
Q 002020 876 LLIPPTSLIIVNMVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLV 955 (980)
Q Consensus 876 l~iP~~~Llllnlvaiv~gi~r~~~~~~~~~~~~~g~l~~~~Wvv~~l~Pfl~gL~gR~~~~p~~v~~~s~~l~~~~~~l 955 (980)
+++|+++++++|++|+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++||++|+||
T Consensus 992 L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr~~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436 992 LLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHH
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred eeEecCCcccCCCcccccccccccC
Q 002020 956 WVKIDPFVEKTNSATLGQTCISIDC 980 (980)
Q Consensus 956 wv~~~~~~~~~~~~~~~~~~~~~~~ 980 (980)
||+|+||+++ +||++ ++| |++|
T Consensus 1072 ~v~~~~~~~~-~~~~~-~~~-~~~~ 1093 (1094)
T PLN02436 1072 WVRVNPFVSK-GGPVL-EIC-GLDC 1093 (1094)
T ss_pred HeeeccccCC-CCccc-ccc-CccC
Confidence 9999999999 99998 999 9999
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 980 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 1e-11 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 2e-07 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 980 | |||
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 9e-26 |
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 9e-26
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 1 MMQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
+ C CGDQ+G T G++FVAC+EC FP C+ C++ E +EG + C +C + Y
Sbjct: 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 980 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.51 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.45 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.39 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.37 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.35 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.34 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.21 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 98.88 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 98.88 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.8 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 98.51 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 98.12 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 97.66 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 96.7 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 95.91 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 95.2 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 94.21 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 93.24 | |
| 1vyx_A | 60 | ORF K3, K3RING; zinc-binding protein, ring domain, | 91.55 | |
| 2ct2_A | 88 | Tripartite motif protein 32; zinc-finger protein H | 89.93 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 89.36 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 89.35 | |
| 2d8s_A | 80 | Cellular modulator of immune recognition; C-MIR, m | 89.14 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 86.92 | |
| 2ecy_A | 66 | TNF receptor-associated factor 3; metal binding pr | 86.52 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 85.92 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 85.8 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 82.98 | |
| 2ecv_A | 85 | Tripartite motif-containing protein 5; metal bindi | 82.91 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 82.82 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 82.67 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 82.49 | |
| 2ecw_A | 85 | Tripartite motif-containing protein 30; metal bind | 80.97 | |
| 1chc_A | 68 | Equine herpes virus-1 ring domain; viral protein; | 80.78 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=491.75 Aligned_cols=491 Identities=23% Similarity=0.360 Sum_probs=375.4
Q ss_pred hhH-HHHHHHHHHHHHHHHHhcCCCCc-----hhhHHHHHHHHHHHHHHHHHHhhcccccccccchhHhHhhhhhccCCC
Q 002020 173 YRT-VIIVRLIILGLFFHYRVTHPVDS-----ALGLWLTSVICEIWFAFSWVLDQFPKWSPVDRETYIDRLSARFEREGE 246 (980)
Q Consensus 173 ~R~-~~~~~l~~l~~~l~~R~~~~~~~-----~~~lwl~~~~~E~~f~~~wil~~~~kw~pv~r~~~~d~L~~~~~~~~~ 246 (980)
.|+ ++++.+++.+.|++||++.+++. ++++|++++++|+++.+.|++..+..+.|..|...++ ..
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~ 135 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ 135 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CC
Confidence 455 45566777889999999987663 2456888999999999999999999999998865432 23
Q ss_pred CCCCceeEEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEecCCCcchhhHHHHhhHHhhhhhhhhhhhcCCCCC
Q 002020 247 PSELAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLTFETLVQTADFARKWVPFCKKFSIEPR 326 (980)
Q Consensus 247 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDg~~~ltf~al~E~~~fa~~WvpfCkk~~iepr 326 (980)
++++|.|+|+||||| |++.++.+|+.|++++|||.+++.++|+|||+++-|.+.
T Consensus 136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------- 189 (802)
T 4hg6_A 136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------- 189 (802)
T ss_dssp TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------
T ss_pred ccCCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------
Confidence 567899999999999 999999999999999999999999999999998854432
Q ss_pred CcccccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCccceeeeecC
Q 002020 327 APEFYFSQKIDYLKDKIQPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGH 406 (980)
Q Consensus 327 ~Pe~YF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~iiqv~l~~ 406 (980)
.+|+.+++.. +.++ .++.++++.
T Consensus 190 ----------------~d~~i~~~~~---~~~~----~l~~~~~~~---------------------------------- 212 (802)
T 4hg6_A 190 ----------------PDPELAQKAQ---ERRR----ELQQLCREL---------------------------------- 212 (802)
T ss_dssp ----------------SSHHHHHHHH---HHHH----HHHHHHHHH----------------------------------
T ss_pred ----------------CCHHHHHHHH---hhhH----HHHHHHHhc----------------------------------
Confidence 1122222211 1111 122222111
Q ss_pred CCCCCCcCCCCCcEEEEecccCCCCCCCCchhhHHHHHHhccccCCCCEEEEecCCCCCCchHHHHHHHhhh-cCCCCCC
Q 002020 407 SGACDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFM-MDPQVGR 485 (980)
Q Consensus 407 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGalNallrvsa~~tng~~il~lD~D~~i~~~~~Lr~amcff-~Dp~~g~ 485 (980)
.+.|+.|++ +++.||||+|.+++. ++++||+++|||++ +.|++|++++.+| .||+
T Consensus 213 ------------~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp~--- 268 (802)
T 4hg6_A 213 ------------GVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDPD--- 268 (802)
T ss_dssp ------------TCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSSS---
T ss_pred ------------CcEEEEecC----CCCcchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHHhcCCC---
Confidence 177899987 678899999999995 68999999999996 5899999999998 5886
Q ss_pred ceEEEccCccccCCCcc-------chhhhhhhhhhhhhccccccCCCccccccccchhhhhhccCCCCCCCCCCCCCCCC
Q 002020 486 DVCYVQFPQRFDGIDKS-------DRYANRNIVFFDVNMKGLDGIQGPMYVGTGCMFNRQALYGYGPPTMPTLPKTSSSC 558 (980)
Q Consensus 486 ~v~~VQ~PQ~F~n~d~~-------dr~~n~~~vFfdi~~~gldg~qgp~yvGTg~~~RR~ALyg~~p~~~~~~~~~~~~~ 558 (980)
+++||+|+.+.|.++. .++.+++..||...+.+.+.+++++++|++++|||+++
T Consensus 269 -v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------ 329 (802)
T 4hg6_A 269 -LFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------ 329 (802)
T ss_dssp -CCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------
T ss_pred -eEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------
Confidence 8999999999997742 44567788999999999999999999999999998887
Q ss_pred CCCCCCCCCCCCCCCCcchhhHhhhhhhhhHHHHhhhhhhccccchhhHhHhhhhhhhhhccCchHHHHHHHHHhcCCCC
Q 002020 559 SWCGCCSCCCPSKKPSKDLSEAYRDAKREELDAAIFNLKEIDNYDDYERSMLISQMSFEKTFGLSSVFIESTLMENGGVP 638 (980)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~Sal~e~GG~~ 638 (980)
+++||++
T Consensus 330 -------------------------------------------------------------------------~~vGgf~ 336 (802)
T 4hg6_A 330 -------------------------------------------------------------------------DEAGGFA 336 (802)
T ss_dssp -------------------------------------------------------------------------HHHTTCC
T ss_pred -------------------------------------------------------------------------HHcCCcC
Confidence 3567775
Q ss_pred CCCCchhHHHHHHHhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEecCCCCceecccCCCHHHHHHHHH
Q 002020 639 DSANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSLYCMPLRPAFKGSAPINLSDRLHQVL 718 (980)
Q Consensus 639 ~~~~~~~~~~ea~~v~sC~Ye~~T~wGkevGW~y~sITED~~tg~rL~~~GwrsvY~~p~ra~~~G~aP~tl~~~l~QR~ 718 (980)
+ ++++||.+++++++++||+++|+++ +.+++.+|+|+.++++||.
T Consensus 337 ~---------------------------------~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 337 G---------------------------------ETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG 381 (802)
T ss_dssp C---------------------------------SSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred C---------------------------------CCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence 4 6788999999999999999999954 7899999999999999999
Q ss_pred HhhchhHHHHHhhcCccccccCCCCCChhhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHH
Q 002020 719 RWALGSVEIFLSRHCPLWYGFGGGRLKLLQRLAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASVLFLGLF 798 (980)
Q Consensus 719 RWa~G~lQil~sk~~Pl~~~~~~grL~~~QRL~Yl~~~lypl~sl~~liy~llPil~LltG~~iiP~~s~~~~~~fl~lf 798 (980)
||++|.+|+++. ++|++ .+.+++.||+.|+...++++.+++.++++++|+++++++..+++.....+..+++.++
T Consensus 382 RW~~G~~q~l~~-~~pl~----~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~ 456 (802)
T 4hg6_A 382 RWATGMMQMLLL-KNPLF----RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYL 456 (802)
T ss_dssp HHHHHHHHHHHH-SCTTS----CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHH
T ss_pred HHHccHHHHHHH-hCccc----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHH
Confidence 999999999975 47775 2459999999999999999999999999999999999998877654333322222222
Q ss_pred H-HHHHHHHHhhhccCcccccccchhHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEeccCCcccccccceeeeccccc
Q 002020 799 L-SIIATSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLK-MLAGLDTNFTVTSKAADDLEFGELYIIKWTTL 876 (980)
Q Consensus 799 l-s~~~~~lLe~~w~G~s~~~wWr~e~~W~I~~vsa~l~av~~allk-~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~l 876 (980)
+ .+.+...+ +.+.. ..|| ++.++.+.+. + .+.+++. .+++++.+|.||+|+...+.. + + + .+
T Consensus 457 l~~~~~~~~~---~~~~r-~~~~-~~l~~~~~~~----~-~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~---~-~-~-~~ 520 (802)
T 4hg6_A 457 AVSFLVQNAL---FARQR-WPLV-SEVYEVAQAP----Y-LARAIVTTLLRPRSARFAVTAKDETLSEN---Y-I-S-PI 520 (802)
T ss_dssp HHHHHHHHHH---HTTTS-CTTH-HHHHHHHHHH----H-HHHHHHHHHHSTTCCCCCCCCCCCCCSSC---C-B-C-TT
T ss_pred HHHHHHHHHH---hcCcH-HHHH-HHHHHHHHHH----H-HHHHHHHHHhCCCCCcceECCCCcccccc---c-h-h-hH
Confidence 2 11122222 11111 1233 3444433322 2 2333333 356788999999999865432 1 1 3 47
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcCccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 002020 877 LIPPTSLIIVNMVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIVHLYPFLKGLM 931 (980)
Q Consensus 877 ~iP~~~Llllnlvaiv~gi~r~~~~~~~~~~~~~g~l~~~~Wvv~~l~Pfl~gL~ 931 (980)
+.|++++++++++++++|+++....+. +..+.+++++|+++|++.+..++.
T Consensus 521 ~~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~ 571 (802)
T 4hg6_A 521 YRPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALR 571 (802)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhhhhHHHHHHHHHHHHHHH
Confidence 889999999999999999998875442 345678999999999999998885
|
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
|---|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
| >1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 | Back alignment and structure |
|---|
| >2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
| >2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
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| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
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| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
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| >2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
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| >1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1 | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 980 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 2e-26 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 101 bits (253), Expect = 2e-26
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 3 QSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYDE 60
C CGDQ+G T G++FVAC+EC FP C+ C++ E +EG + C +C + Y
Sbjct: 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 980 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 99.97 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.43 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.93 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.6 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 96.8 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 95.43 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 94.06 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 93.88 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 90.76 | |
| d2c2la2 | 80 | STIP1 homology and U box-containing protein 1, STU | 82.68 | |
| d1t1ha_ | 78 | E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsi | 82.45 | |
| d2baya1 | 56 | Pre-mRNA splicing factor Prp19 {Baker's yeast (Sac | 81.56 | |
| d1rmda2 | 86 | V(D)J recombination activating protein 1 (RAG1), d | 81.47 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=2.8e-33 Score=243.71 Aligned_cols=58 Identities=41% Similarity=1.106 Sum_probs=56.1
Q ss_pred CCCCCCcccccCCCccccCCCCeeecCCCCCCCcccchHHHHHhhcCccCCCCCCCCC
Q 002020 2 MQSGAPVCNTCGDQVGFTANGEVFVACSECNFPICKSCFDDEIKEGRKACLRCASPYD 59 (980)
Q Consensus 2 ~~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~FpvCr~Cyeye~~eG~~~CP~Ckt~Y~ 59 (980)
..+++|+||||||+||+++|||+|||||||+|||||||||||||||+|+||||||||+
T Consensus 12 ~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 12 KNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred hhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 4689999999999999999999999999999999999999999999999999999993
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
|---|
| >d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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