Citrus Sinensis ID: 002079

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-
MSSPVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCCSSSSSSSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPRAT
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEEccccccEEEEEEEccccEEEEcccccccccEEEEEEccccccHHHHHHccccccccEEEEcccHHHHHHHHccEEEEccccccccccccccccccccccccccccEEEcccEEEEEEccccccEEEEEEEcccccccEEEEcccccccEEEEEccccccccEEEEEEEEccccccccccccccccccEEccccccccEEcccccccccccccccccccccccccccccEEEEccccccccccccccccccccccEEEEccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHccccccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccccEEEEEcccccccccccccccccccccccccccEEEcccccHHHcccccccccccccccccccccccccccccHHHHHHHHccccccEEEEccccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccccccccccccccccccEEcccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHcEEEcccccccccEEEEEEccccccccccccccccccccEEEEEccccccEEEEccccccccEEEEEEEccccccccccccEEEcccEEEEcccEEEEEEEcccc
cccccEEccHHHccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEcccccccccccccccccccccccEEEEEEccEEEEEccccccEEEEEEcccccEEEcccccEccccEEEEEcccccccHHHHHHcccHccccEEEcccHHHHHHHHHccEEEccccHHHHcccccccHHHHHHccccccccEEcccccEEEEEcccccEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEEEEEEEcccccccccEEEEcccHHEEcccccEEEEEEcccHccccccccccccccccccccccEEEEEEEccccccccccccccccccEEEcccccccHHHHHHHHHHccccccEcccccccccccccccccccccccccccHHHcccccccccHHHHHHHHHccccHHHccccccHHHHHHHHHHHccccccccccEcccccEcHHHcccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccEEEccccccEcccccccccccccHHHHHHHHHHHHHHHHHcccccEEEcHHHHccHHHHHHHHHHHHHccHHccccccccEEEEEEccccccccccccccEcEcccccccccccccHHHHHHHHcccccccccHHcHccccccccccccccccHHHHHHHHHcccEEEEEccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHccccccccccccccccEEEEEccccccccccccccHHHcHcccHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccEEEEEEccccccccccccccccccEEEEEEEcccccEEEEccccccccEEEEEEEccccccccccccccccccEEEEcccEEEEEEccccc
msspvflssafstanghlpllsprpatcpcpgfaskptlaptatffyresvhprfrcccccssssssssssmplelstsasdqdddlgdsLLYSRAYWVSESIIAwnvdvpdgscylYASRTAALSISyggiqgadVEIElqedkgglpanviekfphirdykafkvpagsdaKLLLKCQLAVAdrkcsdatglqlpgildelfsydgplgalyaEETVSLYlwaptaqsvsaciyrdplggnplEVVQLKendgvwsikgpkswegcYYVYEVsvyhpsalqiekcyandpyarglssdgrRTLLVnldsdtlkpegwdklvyekpdilsfsdisiyELHVrdfsvsdhtvhpdfrggyLAFTLQNSAGVSHLKKLSnaglthvhllptfqfagvddrkenwksvgslpglvffgqntFSSWWIVCACGIKsfadaevleklppdsteQQAQITAIqnddgynwgynpvlwgvpkgsyasnpngscrtIEFRRMVQALNHIGLHVVLDVVYNhlqgsgpfddnsvldkvvpgyylrrnsdgfiehstcmnntasEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKeihgvdgssiyiygegwdfgevakngrgvnasqfnlsgtgigsfnDRIRDamlggspfgpplqqgfvtglllqpnghdhgTKAVEEQMLAAAKDHIQVGLAANlrdfqltnsegnkvkgsevktydgtpvayalcptetisyvsahdnetlfdvvslkgipffhcgdeilrsksldrdsynsgdwlnridfsynsnnwgvglppkekneknwplirprladpsfkpqkSHILAALENFSDVLRIryssplfrlrTANAIQERIcfhntgpsavpgVIVMSiedghegvpglsqldsnySYIVVIFNssptevsfvspalqgknlqlhpiqvkSVDEIVknssyeansgcfvipprttsvfveprat
MSSPVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCCSSSSSSSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKendgvwsikgpkSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNldsdtlkpegwdklvyekPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQgsgpfddnsvlDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFqltnsegnkvkgsevktydgtpVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEIlrsksldrdsyNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSyeansgcfvipprttsvfveprat
MSSPVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRcccccssssssssssMPLELSTSAsdqdddlgdsllysRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPRAT
*************************ATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCC****************************SLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWA****************GNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLE***********QITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGH*****AVEEQMLAAAKDHIQVGLAANLRDFQLTN********SEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGL*********WPLI*************SHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSV*******
***PVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCCSSSSS************************LLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPR**
MSSPVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCC***********************DDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKL*********QITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPRAT
********S**STANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCCSSSSSSSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEP***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSPVFLSSAFSTANGHLPLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPRFRCCCCCSSSSSSSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPRAT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query971 2.2.26 [Sep-21-2011]
Q8GTR4965 Pullulanase 1, chloroplas yes no 0.877 0.882 0.683 0.0
P072061090 Pullulanase OS=Klebsiella no no 0.868 0.773 0.341 1e-144
P078111096 Pullulanase OS=Enterobact yes no 0.787 0.697 0.353 1e-136
O33840843 Pullulanase OS=Thermotoga yes no 0.572 0.659 0.255 1e-57
C0SPA0718 Pullulanase OS=Bacillus s yes no 0.562 0.760 0.264 1e-45
B1JHX8662 Glycogen debranching enzy yes no 0.513 0.753 0.222 6e-14
Q664I3662 Glycogen debranching enzy yes no 0.513 0.753 0.222 6e-14
A7FNX4662 Glycogen debranching enzy yes no 0.513 0.753 0.220 8e-14
A1JSI8662 Glycogen debranching enzy yes no 0.505 0.741 0.228 2e-13
Q9M0S5764 Isoamylase 3, chloroplast no no 0.128 0.163 0.358 3e-13
>sp|Q8GTR4|PULA1_ARATH Pullulanase 1, chloroplastic OS=Arabidopsis thaliana GN=PU1 PE=1 SV=2 Back     alignment and function desciption
 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/910 (68%), Positives = 720/910 (79%), Gaps = 58/910 (6%)

Query: 89  DSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGL 148
           D L+YSRAYWV++ +IAWNVDV +GSCY YAS++A LS S  GI G D+ I+L+ + G L
Sbjct: 83  DCLIYSRAYWVTQGVIAWNVDVGEGSCYFYASKSAGLSFSEDGIDGYDLRIKLEAESGSL 142

Query: 149 PANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELF 204
           PA+VIEKFPHIR+YK+FKVP   D + L+K QLAV    A+ +    TGLQLPG+LDELF
Sbjct: 143 PADVIEKFPHIRNYKSFKVPKDLDIRDLVKSQLAVVCFDAEGRLIQGTGLQLPGVLDELF 202

Query: 205 SYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKS 264
           SYDGPLGA +  E VSL+LWAPTAQ+VS CIY++PL  +P+E+  LKE +GVWS +G  S
Sbjct: 203 SYDGPLGAHFTPEGVSLHLWAPTAQAVSVCIYKNPLDKSPMEICPLKEANGVWSTEGACS 262

Query: 265 WEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVY 324
           W GCYYVY+VSVYHPS +++E CYANDPYARGLS+DGR+T LVNLDSD LKPEGWD L  
Sbjct: 263 WGGCYYVYKVSVYHPSTMKLETCYANDPYARGLSADGRKTFLVNLDSDDLKPEGWDNLAD 322

Query: 325 EKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTH 384
           +KP + SFSDISIYELHVRDFS +D TV P+ RGGYLAFT ++SAGV HL+KL +AGLTH
Sbjct: 323 KKPCLRSFSDISIYELHVRDFSANDETVEPENRGGYLAFTSKDSAGVKHLQKLVDAGLTH 382

Query: 385 VHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLP 444
           +HLLPTFQF  VDD KENWKSV                             D  +LE L 
Sbjct: 383 LHLLPTFQFGDVDDEKENWKSV-----------------------------DTSLLEGLR 413

Query: 445 PDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGL 504
           PDSTE QA+IT IQNDDGYNWGYNPVLWGVPKGSYAS+P G CR IEFR+MVQALN  GL
Sbjct: 414 PDSTEAQARITEIQNDDGYNWGYNPVLWGVPKGSYASDPTGPCRIIEFRKMVQALNCTGL 473

Query: 505 HVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLI 564
           +VVLDVVYNHL  SGP D  SVLDK+VPGYYLRRNSDGFIE+STC+NNTASEHYMV+RLI
Sbjct: 474 NVVLDVVYNHLHASGPHDKESVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLI 533

Query: 565 IDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDF 624
            DDLL W VNYKVDGFRFDLMGHIMK+T++ AK A+ SL KE  GVDGS IY+YGEGW+F
Sbjct: 534 RDDLLNWVVNYKVDGFRFDLMGHIMKATIVNAKSAIGSLRKETDGVDGSRIYLYGEGWNF 593

Query: 625 GEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDH 684
           GEVA+NGRG+NASQFNL GTGIGSFNDRIRDA LGGSPFG PLQQGF+TGLLLQPN HDH
Sbjct: 594 GEVAENGRGINASQFNLGGTGIGSFNDRIRDATLGGSPFGHPLQQGFITGLLLQPNAHDH 653

Query: 685 GTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTET 744
           G++A +E ML+ AK+HIQ G+AANL+D+ LTN EG +VKGSEV  +D TPVAYA  PTET
Sbjct: 654 GSEATQELMLSTAKNHIQTGMAANLKDYMLTNHEGKEVKGSEVLMHDATPVAYASLPTET 713

Query: 745 ISYVSAHDNETLFDVVSLK-------------------------GIPFFHCGDEILRSKS 779
           I+YVSAHDNETLFD++SLK                         GIPFFH GDEILRSKS
Sbjct: 714 INYVSAHDNETLFDIISLKTPMEISVDERCRINHLASSMIALSQGIPFFHAGDEILRSKS 773

Query: 780 LDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAA 839
           LDRDSYNSGDW NR+DFSY+SNNWGVGLPPK KNE NWPLI+PRL DPSFKP+ SHI+A 
Sbjct: 774 LDRDSYNSGDWFNRLDFSYSSNNWGVGLPPKGKNEHNWPLIKPRLQDPSFKPKSSHIVAT 833

Query: 840 LENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQL 899
           L NF D+LRIRYSSPLFRL TA AIQER+ FHNTGPS++PG IVMSIEDGH G+P +SQ+
Sbjct: 834 LHNFLDLLRIRYSSPLFRLDTARAIQERVRFHNTGPSSIPGAIVMSIEDGHRGIPSVSQI 893

Query: 900 DSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPP 959
           D  YS IVVIFN+ P+E S+ SPAL+ + L+LHP+QV S DEIVK S Y++ SG F +P 
Sbjct: 894 DPIYSLIVVIFNARPSEFSYPSPALKDRKLELHPVQVMSADEIVKKSVYDSFSGGFTVPA 953

Query: 960 RTTSVFVEPR 969
           RTT+VFVE R
Sbjct: 954 RTTTVFVESR 963
Involved in starch degradation and also probably in the trimming of pre-amylopectin chains during starch synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4EC: 2
>sp|P07206|PULA_KLEPN Pullulanase OS=Klebsiella pneumoniae GN=pulA PE=1 SV=2 Back     alignment and function description
>sp|P07811|PULA_ENTAE Pullulanase OS=Enterobacter aerogenes GN=pulA PE=1 SV=1 Back     alignment and function description
>sp|O33840|PULA_THEMA Pullulanase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=pulA PE=1 SV=2 Back     alignment and function description
>sp|C0SPA0|PULA_BACSU Pullulanase OS=Bacillus subtilis (strain 168) GN=amyX PE=1 SV=1 Back     alignment and function description
>sp|B1JHX8|GLGX_YERPY Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q664I3|GLGX_YERPS Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A7FNX4|GLGX_YERP3 Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A1JSI8|GLGX_YERE8 Glycogen debranching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query971
224109856893 predicted protein [Populus trichocarpa] 0.888 0.966 0.751 0.0
359486863896 PREDICTED: pullulanase 1, chloroplastic- 0.890 0.965 0.745 0.0
296085954956 unnamed protein product [Vitis vinifera] 0.932 0.946 0.714 0.0
255584074964 pullulanase, putative [Ricinus communis] 0.894 0.901 0.745 0.0
356535501951 PREDICTED: pullulanase 1, chloroplastic- 0.890 0.909 0.717 0.0
449449505960 PREDICTED: pullulanase 1, chloroplastic- 0.927 0.938 0.673 0.0
449487307946 PREDICTED: pullulanase 1, chloroplastic- 0.927 0.952 0.673 0.0
297806411964 hypothetical protein ARALYDRAFT_487216 [ 0.877 0.883 0.681 0.0
30680478965 protein limit dextrinase [Arabidopsis th 0.877 0.882 0.683 0.0
27311611965 pullulanase-like protein (starch debranc 0.877 0.882 0.682 0.0
>gi|224109856|ref|XP_002315334.1| predicted protein [Populus trichocarpa] gi|222864374|gb|EEF01505.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1434 bits (3712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/928 (75%), Positives = 778/928 (83%), Gaps = 65/928 (7%)

Query: 72  MPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDV-PDGSCYLYASRTAALSISYG 130
           MPLE+STS S       DSLLYSRA+WV++SIIAWN DV  DGSCYLYAS+TAALS++ G
Sbjct: 1   MPLEVSTSPSQ------DSLLYSRAFWVTQSIIAWNADVVRDGSCYLYASQTAALSVTDG 54

Query: 131 GIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVA----DR 186
            ++G D +I+L+ED GG+P NVI KFPH+RDYKAFKVP+  DAK L+KCQLAVA    D 
Sbjct: 55  EVEGHDFKIKLEEDSGGIPQNVIAKFPHVRDYKAFKVPSTVDAKSLVKCQLAVATFGSDG 114

Query: 187 KCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLE 246
           KCS ATGLQLPG+LDELF+YDGPLGA Y+E+ VSLYLWAPTAQ+V AC+Y++    +P+E
Sbjct: 115 KCSYATGLQLPGVLDELFAYDGPLGAHYSEDAVSLYLWAPTAQAVCACVYKNANSRDPVE 174

Query: 247 VVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLL 306
           VVQLKE +GVWS++G K WEGCYYVYEVSVYHPS L +EKCYANDPYARGLS D +RTL 
Sbjct: 175 VVQLKEVNGVWSVEGSKDWEGCYYVYEVSVYHPSTLHVEKCYANDPYARGLSPDSQRTLF 234

Query: 307 VNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQ 366
           VNLDSDTLKPEGW+KL  EKP ILSFSDISIYELHVRDFS +DHTVHPDFRGGYLAFTL+
Sbjct: 235 VNLDSDTLKPEGWEKLADEKPIILSFSDISIYELHVRDFSANDHTVHPDFRGGYLAFTLE 294

Query: 367 NSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIV 426
           +SAGV HLKKLSNAG+THVHLLPTFQFAGVDD KENWK V                    
Sbjct: 295 DSAGVLHLKKLSNAGITHVHLLPTFQFAGVDDVKENWKCV-------------------- 334

Query: 427 CACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGS 486
                    D+ VLEKLPPDSTEQQAQIT IQ+DDGYNWGYNPVLWGVPKGSYASNP+GS
Sbjct: 335 ---------DSTVLEKLPPDSTEQQAQITLIQDDDGYNWGYNPVLWGVPKGSYASNPSGS 385

Query: 487 CRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEH 546
           CRTIEFR+MVQALNHIGL VVLDVVYNHL G+GPFD+NSVLDK+VPGYYLRRN+DGFIEH
Sbjct: 386 CRTIEFRKMVQALNHIGLRVVLDVVYNHLHGNGPFDENSVLDKIVPGYYLRRNTDGFIEH 445

Query: 547 STCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKE 606
           STC+NNTASEHYMVER+IIDD+L WA NYKVDGFRFDLMGHIMKSTM+KAK A++ LTKE
Sbjct: 446 STCVNNTASEHYMVERMIIDDMLNWAGNYKVDGFRFDLMGHIMKSTMVKAKDAVNRLTKE 505

Query: 607 IHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPP 666
             G+DGSS+YIYGEGWDFGEVA NGRG+NASQFN+ GTGIGSFNDRIRDAMLGGSPFG P
Sbjct: 506 RDGIDGSSVYIYGEGWDFGEVANNGRGINASQFNVGGTGIGSFNDRIRDAMLGGSPFGHP 565

Query: 667 LQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSE 726
           LQQGFVTGL+LQPNGHDHG K VEE ML+AAKDHIQVG+A NLRD+ LTNS+G +VKG E
Sbjct: 566 LQQGFVTGLMLQPNGHDHGGKDVEELMLSAAKDHIQVGMAGNLRDYVLTNSDGKEVKGME 625

Query: 727 VKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLK----------------------- 763
           V TY G PVAYAL P ETI+YVSAHDNETLFDVVS+K                       
Sbjct: 626 VLTYGGAPVAYALHPAETINYVSAHDNETLFDVVSMKTPMEISVDERCRLNHLASSVIAL 685

Query: 764 --GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIR 821
             GIPFFH GDE+LRSKSLDRDSYNSGDW NR+DF+YNSNNWGVGLPPK+KNEK+WPLIR
Sbjct: 686 SQGIPFFHSGDEMLRSKSLDRDSYNSGDWFNRLDFTYNSNNWGVGLPPKQKNEKHWPLIR 745

Query: 822 PRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGV 881
           PRLADPSFKPQK+HILAA+ NF DVL+IRYSSPLFRL TANAIQER+ FHNTGPS VPGV
Sbjct: 746 PRLADPSFKPQKNHILAAINNFLDVLQIRYSSPLFRLTTANAIQERVRFHNTGPSWVPGV 805

Query: 882 IVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDE 941
           IVMS EDGH GVPGL+QLD  YS+IVVIFN+SP+EVSF SP L+ +  QLHPIQ  S DE
Sbjct: 806 IVMSFEDGHRGVPGLTQLDPIYSFIVVIFNASPSEVSFASPVLRARTFQLHPIQAMSTDE 865

Query: 942 IVKNSSYEANSGCFVIPPRTTSVFVEPR 969
           +VKNSSYE ++GCF +PPRTTSVFVE R
Sbjct: 866 VVKNSSYETSTGCFTVPPRTTSVFVEYR 893

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359486863|ref|XP_002271820.2| PREDICTED: pullulanase 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085954|emb|CBI31395.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255584074|ref|XP_002532780.1| pullulanase, putative [Ricinus communis] gi|223527468|gb|EEF29599.1| pullulanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535501|ref|XP_003536283.1| PREDICTED: pullulanase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|449449505|ref|XP_004142505.1| PREDICTED: pullulanase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449487307|ref|XP_004157562.1| PREDICTED: pullulanase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297806411|ref|XP_002871089.1| hypothetical protein ARALYDRAFT_487216 [Arabidopsis lyrata subsp. lyrata] gi|297316926|gb|EFH47348.1| hypothetical protein ARALYDRAFT_487216 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30680478|ref|NP_196056.2| protein limit dextrinase [Arabidopsis thaliana] gi|332278143|sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gi|332003349|gb|AED90732.1| protein limit dextrinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|27311611|gb|AAO00771.1| pullulanase-like protein (starch debranching enzyme) [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query971
TAIR|locus:2179919965 LDA "limit dextrinase" [Arabid 0.377 0.380 0.706 0.0
TIGR_CMR|CPS_0996998 CPS_0996 "alpha amylase family 0.544 0.530 0.396 1.3e-139
TIGR_CMR|CPS_1694 1429 CPS_1694 "putative pullulanase 0.559 0.379 0.354 6.5e-80
TIGR_CMR|BA_2728852 BA_2728 "pullulanase, putative 0.205 0.234 0.410 1.2e-49
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.202 0.276 0.341 4.6e-47
TIGR_CMR|BA_4953713 BA_4953 "pullulanase, putative 0.202 0.276 0.341 4.6e-47
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.220 0.280 0.306 2.7e-19
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.177 0.262 0.316 3.1e-16
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.177 0.262 0.316 3.1e-16
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.320 0.414 0.265 6.7e-15
TAIR|locus:2179919 LDA "limit dextrinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1382 (491.5 bits), Expect = 0., Sum P(3) = 0.
 Identities = 269/381 (70%), Positives = 306/381 (80%)

Query:   436 DAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRM 495
             D  +LE L PDSTE QA+IT IQNDDGYNWGYNPVLWGVPKGSYAS+P G CR IEFR+M
Sbjct:   405 DTSLLEGLRPDSTEAQARITEIQNDDGYNWGYNPVLWGVPKGSYASDPTGPCRIIEFRKM 464

Query:   496 VQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTAS 555
             VQALN  GL+VVLDVVYNHL  SGP D  SVLDK+VPGYYLRRNSDGFIE+STC+NNTAS
Sbjct:   465 VQALNCTGLNVVLDVVYNHLHASGPHDKESVLDKIVPGYYLRRNSDGFIENSTCVNNTAS 524

Query:   556 EHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSI 615
             EHYMV+RLI DDLL W VNYKVDGFRFDLMGHIMK+T++ AK A+ SL KE  GVDGS I
Sbjct:   525 EHYMVDRLIRDDLLNWVVNYKVDGFRFDLMGHIMKATIVNAKSAIGSLRKETDGVDGSRI 584

Query:   616 YIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGL 675
             Y+YGEGW+FGEVA+NGRG+NASQFNL GTGIGSFNDRIRDA LGGSPFG PLQQGF+TGL
Sbjct:   585 YLYGEGWNFGEVAENGRGINASQFNLGGTGIGSFNDRIRDATLGGSPFGHPLQQGFITGL 644

Query:   676 LLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPV 735
             LLQPN HDHG++A +E ML+ AK+HIQ G+AANL+D+ LTN EG +VKGSEV  +D TPV
Sbjct:   645 LLQPNAHDHGSEATQELMLSTAKNHIQTGMAANLKDYMLTNHEGKEVKGSEVLMHDATPV 704

Query:   736 AYALCPTETISYVSAHDNETLFDVVSLKGIPFFHCGDEILRSKSLDRDS---------YN 786
             AYA  PTETI+YVSAHDNETLFD++SLK  P     DE  R   L             ++
Sbjct:   705 AYASLPTETINYVSAHDNETLFDIISLK-TPMEISVDERCRINHLASSMIALSQGIPFFH 763

Query:   787 SGDWLNR---IDF-SYNSNNW 803
             +GD + R   +D  SYNS +W
Sbjct:   764 AGDEILRSKSLDRDSYNSGDW 784
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0043169 "cation binding" evidence=IEA
GO:0051060 "pullulanase activity" evidence=IEA;IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0010303 "limit dextrinase activity" evidence=IDA
GO:0005983 "starch catabolic process" evidence=IMP;TAS
GO:0019252 "starch biosynthetic process" evidence=RCA;IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0000272 "polysaccharide catabolic process" evidence=RCA
GO:0005982 "starch metabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0015996 "chlorophyll catabolic process" evidence=RCA
GO:0016556 "mRNA modification" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019760 "glucosinolate metabolic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
TIGR_CMR|CPS_0996 CPS_0996 "alpha amylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1694 CPS_1694 "putative pullulanase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2728 BA_2728 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4953 BA_4953 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8GTR4PULA1_ARATH3, ., 2, ., 1, ., 1, 4, 20.68350.87740.8829yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.41LOW CONFIDENCE prediction!
3rd Layer3.2.1.1420.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query971
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 0.0
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 0.0
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 1e-124
pfam11852168 pfam11852, DUF3372, Domain of unknown function (DU 2e-85
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 2e-81
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 1e-79
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 2e-47
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 5e-39
cd0286097 cd02860, E_set_Pullulanase, Early set domain assoc 6e-32
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 7e-25
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 3e-24
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 1e-20
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-15
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 9e-15
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 8e-14
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 2e-11
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 3e-11
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 1e-08
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 1e-08
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 3e-08
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 3e-08
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 2e-06
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 1e-05
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 6e-05
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 8e-05
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 1e-04
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 1e-04
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 2e-04
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 2e-04
cd02855105 cd02855, E_set_GBE_prok_N, N-terminal Early set do 7e-04
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 0.003
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information 
 Score = 1661 bits (4304), Expect = 0.0
 Identities = 701/1003 (69%), Positives = 785/1003 (78%), Gaps = 87/1003 (8%)

Query: 19  PLLSPRPATCPCPGFASKPTLAPTATFFYRESVHPR-----------------------F 55
            LL+P PA    P        A +A F  R                              
Sbjct: 3   LLLTPSPAVHLAPAPCVARPRASSAAFVLRSRWLRSRGATSISFVAHRGRNFRVRIPSAT 62

Query: 56  RCCCCCSSSSSSSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSC 115
                   SS+SS  ++ L + TS         D LLYSRAYWV+ESIIAWNVDV DGSC
Sbjct: 63  SLAMATRPSSASSFFTLELSVPTSL------FQDDLLYSRAYWVTESIIAWNVDVGDGSC 116

Query: 116 YLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKVPAGSDAKL 175
           +LYAS+TA LS+S  G++G D+ ++L+ED GGLP NVIEKFPHIR Y+AFKVP+  D K 
Sbjct: 117 FLYASKTAGLSVSDDGVEGYDLVVKLEEDSGGLPPNVIEKFPHIRGYRAFKVPSTVDVKD 176

Query: 176 LLKCQLAVA----DRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSV 231
           LLKCQLAVA    D KC+DATGLQLPG+LD+LF+YDGPLGA ++++ VSLYLWAPTAQ+V
Sbjct: 177 LLKCQLAVAAFDADGKCTDATGLQLPGVLDDLFAYDGPLGAHFSKDAVSLYLWAPTAQAV 236

Query: 232 SACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYAND 291
           S C+Y DP G  PLE+VQLKE++GVWS++GPKSWEGCYYVYEVSVYHPS  ++E CYAND
Sbjct: 237 SLCLYDDPRGKEPLEIVQLKESNGVWSVEGPKSWEGCYYVYEVSVYHPSTGKVETCYAND 296

Query: 292 PYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHT 351
           PYARGLS+DGRRTLLV+LDSD LKPEGWD L  EKP +LSFSDISIYELHVRDFS +D T
Sbjct: 297 PYARGLSADGRRTLLVDLDSDDLKPEGWDNLAKEKPCLLSFSDISIYELHVRDFSANDET 356

Query: 352 VHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPG 411
           VHPDFRGGYLAFT Q+SAGV HLKKL++AGLTHVHLLPTFQF  VDD KENWK V     
Sbjct: 357 VHPDFRGGYLAFTSQDSAGVLHLKKLADAGLTHVHLLPTFQFGSVDDEKENWKCV----- 411

Query: 412 LVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVL 471
                                   D + LEKLPPDS EQQA ITAIQ+DDGYNWGYNPVL
Sbjct: 412 ------------------------DPKELEKLPPDSEEQQAAITAIQDDDGYNWGYNPVL 447

Query: 472 WGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVV 531
           WGVPKGSYASNP+G CR IEFR+MVQALN IGL VVLDVVYNHL  SGPFD+NSVLDK+V
Sbjct: 448 WGVPKGSYASNPDGPCRIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIV 507

Query: 532 PGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKS 591
           PGYYLRRNSDGFIE+STC+NNTASEHYMV+RLI+DDLL WAVNYKVDGFRFDLMGH+MK 
Sbjct: 508 PGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDDLLNWAVNYKVDGFRFDLMGHLMKR 567

Query: 592 TMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFND 651
           TM++AK AL SLT E  GVDGSSIY+YGEGWDFGEVAKNGRGVNASQFNL+GTGIGSFND
Sbjct: 568 TMVRAKDALQSLTLERDGVDGSSIYLYGEGWDFGEVAKNGRGVNASQFNLAGTGIGSFND 627

Query: 652 RIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRD 711
           RIRDAMLGGSPFG PLQQGFVTGL LQPNGHD G + V+E MLA AKDHIQVG+A NL+D
Sbjct: 628 RIRDAMLGGSPFGHPLQQGFVTGLFLQPNGHDQGGEDVQELMLATAKDHIQVGMAGNLKD 687

Query: 712 FQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLK-------- 763
           + LTN EG +VKGSEV T+DG PVAYA  PTETI+YVSAHDNETLFD++SLK        
Sbjct: 688 YVLTNREGKEVKGSEVLTHDGKPVAYASSPTETINYVSAHDNETLFDIISLKTPMEISVD 747

Query: 764 -----------------GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVG 806
                            GIPFFH GDEILRSKSLDRDSYNSGDW NR+DFSY+SNNWGVG
Sbjct: 748 ERCRINHLATSIIALSQGIPFFHAGDEILRSKSLDRDSYNSGDWFNRLDFSYDSNNWGVG 807

Query: 807 LPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQE 866
           LPPKEKNE NWPLI+PRLADPSFKP K HILAAL+NF D+LRIRYSSPLFRLRTANAIQE
Sbjct: 808 LPPKEKNEDNWPLIKPRLADPSFKPSKEHILAALDNFLDLLRIRYSSPLFRLRTANAIQE 867

Query: 867 RICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQG 926
           R+ FHNTGPS++PGVIVMSIEDGHEGVPGLSQLD  YS IVVIFN+ PTEVSF SPAL+G
Sbjct: 868 RVRFHNTGPSSIPGVIVMSIEDGHEGVPGLSQLDPIYSRIVVIFNARPTEVSFESPALKG 927

Query: 927 KNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPR 969
           + L+LHP+QV S DE+VK S YEA+SG F +PPRTT+VFVE R
Sbjct: 928 RTLELHPVQVMSADEVVKKSVYEASSGVFTVPPRTTAVFVEHR 970

Length = 970
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|221267 pfam11852, DUF3372, Domain of unknown function (DUF3372) Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase) Back     alignment and domain information
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|199885 cd02855, E_set_GBE_prok_N, N-terminal Early set domain associated with the catalytic domain of prokaryotic glycogen branching enzyme Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 971
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PLN02960897 alpha-amylase 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PLN02361401 alpha-amylase 100.0
PLN03244872 alpha-amylase; Provisional 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
PLN02784894 alpha-amylase 99.97
PRK13840495 sucrose phosphorylase; Provisional 99.96
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 99.96
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 99.96
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 99.93
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 99.93
smart00642166 Aamy Alpha-amylase domain. 99.77
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.75
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.66
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.64
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.61
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.59
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.48
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.48
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.43
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.38
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.14
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 99.12
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.03
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 98.96
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.85
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.4
PRK05402726 glycogen branching enzyme; Provisional 98.33
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.18
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.03
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.0
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 97.84
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.74
PRK14511879 maltooligosyl trehalose synthase; Provisional 97.63
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 96.65
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 96.42
COG1649418 Uncharacterized protein conserved in bacteria [Fun 96.4
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 95.82
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 95.76
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 95.61
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 95.5
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 95.37
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 94.98
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 94.86
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 94.54
PF13200316 DUF4015: Putative glycosyl hydrolase domain 94.41
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 94.2
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 93.88
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 93.83
PLN02960897 alpha-amylase 93.16
cd06600317 GH31_MGAM-like This family includes the following 93.16
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 93.08
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 92.33
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 92.13
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 91.89
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 91.23
PRK10426635 alpha-glucosidase; Provisional 90.99
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 90.02
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 89.83
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 89.23
cd06595292 GH31_xylosidase_XylS-like This family represents a 89.14
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 89.14
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 88.91
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 88.78
PRK10658665 putative alpha-glucosidase; Provisional 88.71
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 88.61
smart0063281 Aamy_C Aamy_C domain. 88.18
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 86.61
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 85.32
PF0915457 DUF1939: Domain of unknown function (DUF1939); Int 84.54
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 82.62
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 81.74
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 81.02
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-204  Score=1833.31  Aligned_cols=870  Identities=80%  Similarity=1.307  Sum_probs=825.4

Q ss_pred             cccccccccccccccCCCCccccCcccceeEEEeCCeeEeeCCCCCCeEEEEEeCCCCeeeecceeeccceEEEeeccCC
Q 002079           67 SSSSSMPLELSTSASDQDDDLGDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKG  146 (971)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~w~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  146 (971)
                      +..+.+.+|++...+.++++    |++++|||||++||+|+++..+.+++||+|++|+|++++++|+|++..++|++.++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~----~~~~~a~w~~~~t~~w~~~~~~~~~~l~~s~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (970)
T PLN02877         72 SASSFFTLELSVPTSLFQDD----LLYSRAYWVTESIIAWNVDVGDGSCFLYASKTAGLSVSDDGVEGYDLVVKLEEDSG  147 (970)
T ss_pred             CccccccccccccccCCcCc----cccceEEEecCceEEEccCCCCceEEEEEcCCCCeeeccCceeccceEEEeecCCC
Confidence            44445667788888888887    89999999999999999887788899999999999999999999998889988778


Q ss_pred             CCChhhhhcCCcccccceeeeCCccchHHHHHhhhhc----cccccccccccccccccccccCCCCCCccEEeCCeeEEE
Q 002079          147 GLPANVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLY  222 (971)
Q Consensus       147 ~l~~~~~~~~p~l~~~~~~~~~~~~~~~~~l~~q~~~----~~g~~~~~t~vq~~~~lD~~y~~~~~LGa~~~~~~v~F~  222 (971)
                      +|+++|++|||||++|+||+++...+++++|||||+|    ++|+++++|+||+||+||++|+|+++|||++.+++++|+
T Consensus       148 ~l~~~~~~~~phl~~~~a~~~~~~~~~~~~l~~ql~~~~~~~~g~~~~at~vq~~~~lD~~y~y~~~LGA~~~~~g~~F~  227 (970)
T PLN02877        148 GLPPNVIEKFPHIRGYRAFKVPSTVDVKDLLKCQLAVAAFDADGKCTDATGLQLPGVLDDLFAYDGPLGAHFSKDAVSLY  227 (970)
T ss_pred             CCCHhHHhcCccccCCcceeCCccccHHHHhhcceEEEEECCCCCEEccccccchhhhhhhccCCCCCcceEecCCEEEE
Confidence            9999999999999999999999888999999999997    789999999999999999999999999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCCCceEEecccCCCEEEEEeCCCCCCceEEEEEEEecCCCccccceeecCccccccccCCC
Q 002079          223 LWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGR  302 (971)
Q Consensus       223 vWAPtA~~V~L~ly~~~~~~~~~~~~~M~~~~GvW~v~~~~~~~G~~Y~Y~v~~~~p~~g~~~~~~vtDPYa~~ls~ng~  302 (971)
                      ||||+|++|+|++|++.++..+...++|++.+|||++++++.++|.+|+|+|++|+|.++++++++++||||++++.||.
T Consensus       228 VWAPtA~~V~L~lyd~~~~~~~~~~~~m~~~~GVWsv~v~~~~~G~~Y~Y~V~v~~p~~g~~~~~~v~DPYA~als~ng~  307 (970)
T PLN02877        228 LWAPTAQAVSLCLYDDPRGKEPLEIVQLKESNGVWSVEGPKSWEGCYYVYEVSVYHPSTGKVETCYANDPYARGLSADGR  307 (970)
T ss_pred             EECCCCCEEEEEEecCCCCccceEEecccCCCCEEEEEeccCCCCCeeEEEEeecccCCCcccccccCCccceEEecCCC
Confidence            99999999999999976544455678898889999999999999999999999999999988888999999999999999


Q ss_pred             ccEEEeCCCCCCCCCcccccccCCCCCCCCCCceEEEEEcccccccCCCCCCCCCcccccccccchhhhhhHHHHHHcCC
Q 002079          303 RTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGL  382 (971)
Q Consensus       303 ~s~vvdl~~~~~~p~~W~~~~~~~P~~~~~~d~vIYElHVrdFs~~d~s~~~~~rG~y~g~~e~~s~~i~hL~~L~~lGv  382 (971)
                      +|+++|+++..++|++|+.....+|.+.+++|+||||+||||||..+++++..+||||+||+|+++++|+||++|++|||
T Consensus       308 ~S~vvDl~~~~~~p~gW~~~~~~~p~~~~~~D~VIYElHVRDFS~~d~sv~~~~RGtylgftE~~s~gi~hLk~LkelGV  387 (970)
T PLN02877        308 RTLLVDLDSDDLKPEGWDNLAKEKPCLLSFSDISIYELHVRDFSANDETVHPDFRGGYLAFTSQDSAGVLHLKKLADAGL  387 (970)
T ss_pred             ceEEECCccccCCChhhhhcccccCccCCCcccEEEEEeccccccCCCCCCcCCCCcchhhhhhhhhHHHHHHHHHHcCC
Confidence            99999999988999999875334676778999999999999999999888999999999999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCcccccccccCCCCCccccccCCCcccceeeecCccccchhhhhhcCCCCChHHHHHHHhhcCCCC
Q 002079          383 THVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDG  462 (971)
Q Consensus       383 T~I~LlPvfd~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~  462 (971)
                      |||||||+|||++++|.+.+++++                             +++.|+.+++++++||+++.++++.+.
T Consensus       388 ThVeLLPvfDf~tvdE~~~~~~~~-----------------------------~~~~l~~~~~~s~~~q~~v~~~~~~d~  438 (970)
T PLN02877        388 THVHLLPTFQFGSVDDEKENWKCV-----------------------------DPKELEKLPPDSEEQQAAITAIQDDDG  438 (970)
T ss_pred             CEEEeCCccccCCccccccccccc-----------------------------ccchhccccccchhhhhcccccccCCC
Confidence            999999999999999988777655                             456788999999999999999999999


Q ss_pred             CCCCCCcCCCCCcCCCCCCCCCCCchhHHHHHHHHHHHhcCCEEEEEEeeccccCCCCCCCCCccCCCCCcceeecCCCC
Q 002079          463 YNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDG  542 (971)
Q Consensus       463 ~nWGYdp~~y~ape~sYgt~~~g~~ri~Efr~mV~alH~~Gi~VIlDvVyNHt~~~g~~~~~s~lDk~vP~YY~r~~~~G  542 (971)
                      |||||||.|||+||+|||++|+++.||+|||+||++||++||+||||||||||+++|++...++|++++|+||+|.+++|
T Consensus       439 yNWGYDP~~YfaPEgSYatdP~g~~RI~efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G  518 (970)
T PLN02877        439 YNWGYNPVLWGVPKGSYASNPDGPCRIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDG  518 (970)
T ss_pred             CCCCCCccccCCCCcccccCCCCcchHHHHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999998888999999999999999999


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCccEEEEecCCCCcHHHHHHHHHHHHhhcccccCCCCCCcEEecccc
Q 002079          543 FIEHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGW  622 (971)
Q Consensus       543 ~~~~stc~~d~a~e~~mv~k~i~Dsl~~W~~ey~IDGFRfDlm~~~~~~~~~~~~~al~~i~p~~~~~~~~~~~l~GEgW  622 (971)
                      .+++++||+++|+||+||+|||+||++||++||||||||||+|+||++++|++++++|++++++.++++|+++|||||||
T Consensus       519 ~~~ns~c~n~~Ase~~mvrklIlDsl~yW~~ey~VDGFRFDlmg~i~~~tm~~~~~~L~~i~~~~~~~dg~~i~lyGEgW  598 (970)
T PLN02877        519 FIENSTCVNNTASEHYMVDRLIVDDLLNWAVNYKVDGFRFDLMGHLMKRTMVRAKDALQSLTLERDGVDGSSIYLYGEGW  598 (970)
T ss_pred             CcccCCccCCCccCCHHHHHHHHHHHHHHHHHhCCCEEEEEccccccHHHHHHHHHHHHHHhhhhcccCCCceEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccCCCcccccchHHHHHHcCCCCCCCCcccccccccccCCCCCCCCChHHHHHHHHHHHhhHH
Q 002079          623 DFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQ  702 (971)
Q Consensus       623 d~gev~~~~~~~~a~q~~~~gtgig~fnDrlRdavrgg~~F~~~~~~gf~~G~~~~~n~~~~g~~~~~~~~l~~~~d~i~  702 (971)
                      +++++++++++++|+|.||++++||+||||+||+||||++|+++..|||++|++.+||+..+|+...++.+|++..|+||
T Consensus       599 ~~g~~~~~~~~~~A~q~n~~g~gIg~FnD~~RDavkGg~~F~~~~~qGf~~G~~~~pn~~~~~~~~~~~~~~~~~~d~i~  678 (970)
T PLN02877        599 DFGEVAKNGRGVNASQFNLAGTGIGSFNDRIRDAMLGGSPFGHPLQQGFVTGLFLQPNGHDQGGEDVQELMLATAKDHIQ  678 (970)
T ss_pred             CCCCcccccccccccccccCCCceEEecchhHHHHcCCCCCCCcCCCceecccccCCcccccccchhhhhhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999888899999999999999988887778888999999999


Q ss_pred             hhhcccchhhhccccCCcccccccccccCCCCccccCCCCceeeeccccccccHHHHhcCC-------------------
Q 002079          703 VGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLK-------------------  763 (971)
Q Consensus       703 ~glaGnl~~~~~~~~~g~~~~Gs~~~~y~g~p~~ya~~P~~~iNyVs~HDn~tL~D~l~~~-------------------  763 (971)
                      .||+|||++|.|++++|..++|+++.+|+|+|++|+.+|.++||||++|||+||||.++++                   
T Consensus       679 ~glaGnl~~~~~~~~~g~~~~g~~~~~y~~~~~~ya~~P~q~InYvs~HDN~TL~D~l~~~~~~~~s~~~r~r~~~la~a  758 (970)
T PLN02877        679 VGMAGNLKDYVLTNREGKEVKGSEVLTHDGKPVAYASSPTETINYVSAHDNETLFDIISLKTPMEISVDERCRINHLATS  758 (970)
T ss_pred             HHhccchhccccccccccccccccccccCCcccccccCHHHheeeeeccCCchHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999998679999999999999999999999999999998765                   


Q ss_pred             ------CeeeEeccccccccCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCcCCCCccccccCCCCCCCCchhhhHH
Q 002079          764 ------GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHIL  837 (971)
Q Consensus       764 ------GiPfiy~GdEigrSks~d~nsY~sgD~~N~~dw~~~~n~w~~GlP~~~~n~~~w~~i~~~l~~~~~~~~~~~~~  837 (971)
                            ||||||+|+|++|||++++||||||||||++||++++||||+||||+.+|+++|++|+++|+||+++|++++|.
T Consensus       759 iv~lsQGipF~haG~E~lRSK~~d~nSYnSgD~~N~lDw~~~~nn~~~GlP~~~~~~~~w~~~~~~l~~~~~~p~~~~i~  838 (970)
T PLN02877        759 IIALSQGIPFFHAGDEILRSKSLDRDSYNSGDWFNRLDFSYDSNNWGVGLPPKEKNEDNWPLIKPRLADPSFKPSKEHIL  838 (970)
T ss_pred             HHHHhChhhHHhcchhhhcCCCCCCCCCcCchhhheeccccccCccccCCChhHhcchhhhhhhhhhcccccccchhHHH
Confidence                  99999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCcccccCchhhhccceEEecCCCCCCCcEEEEEEEcCCCCCCCccccCCCCCEEEEEEeCCCCcE
Q 002079          838 AALENFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEV  917 (971)
Q Consensus       838 ~~~~~~k~Li~LRks~pafrlgt~~~i~~~v~f~~~g~~~~~gviv~~~~d~~~~~~~~~~~d~~~~~ivVv~N~s~~~~  917 (971)
                      .++++||+||+|||+||+||++++++|+++|.|+++|+++++|||+|+|+++.+..++.+++|+.++.|+||||++++++
T Consensus       839 ~~~~~~~~Li~lRks~plFrl~t~~~I~~~v~F~~~g~~~~~gvi~~~i~d~~~~~~~~~~~d~~~~~ivVv~Na~~~~~  918 (970)
T PLN02877        839 AALDNFLDLLRIRYSSPLFRLRTANAIQERVRFHNTGPSSIPGVIVMSIEDGHEGVPGLSQLDPIYSRIVVIFNARPTEV  918 (970)
T ss_pred             HHHHHHHHHHHHHhcCcccCCCCHHHHHhhcEEeccCCCcCCCEEEEEEcCCCCccccccccccccCcEEEEEcCCCccE
Confidence            99999999999999999999999999999999999999999999999999976555567899999999999999999999


Q ss_pred             EEEcCCCCCCceEeecceeccccccccCcceeecCcEEEEcCceEEEEEEcc
Q 002079          918 SFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTTSVFVEPR  969 (971)
Q Consensus       918 ~~~lp~~~~~~~~l~~~~~~~~d~~v~~~~~~~~~g~~tVpa~S~aVfv~~~  969 (971)
                      ++++|.+.+.+++||++|+.+.|++++.+.+...+|+|||||+|++|||++|
T Consensus       919 ~~~~~~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~~~tvp~~t~aVfv~~~  970 (970)
T PLN02877        919 SFESPALKGRTLELHPVQVMSADEVVKKSVYEASSGVFTVPPRTTAVFVEHR  970 (970)
T ss_pred             EEecccccccceeecccccccccceeccceeeccCCeEEecCceEEEEEeeC
Confidence            9999998888999999999999999998888878899999999999999975

>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>PF09154 DUF1939: Domain of unknown function (DUF1939); InterPro: IPR015237 This entry represents a C-terminal domain associated with prokaryotic alpha-amylases Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query971
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 0.0
2fgz_A926 Crystal Structure Analysis Of Apo Pullulanase From 1e-147
2fh6_A920 Crystal Structure Analysis Of Klebsiella Pneumoniae 1e-147
2fh8_A922 Crystal Structure Analysis Of Klebsiella Pneumoniae 1e-147
2fhb_A1083 Crystal Structure Analysis Of Klebsiella Pneumoniae 1e-147
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 5e-66
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 3e-46
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 2e-36
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 3e-36
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 6e-36
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 6e-36
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 5e-13
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 8e-13
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 3e-11
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 2e-08
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 5e-08
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-07
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-07
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 1e-07
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 4e-07
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 8e-07
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 1e-06
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 7e-04
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure 
Iteration: 1

 Score = 1124 bits (2907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/908 (60%), Positives = 663/908 (73%), Gaps = 62/908 (6%)
Query: 94  SRAYWVSESIIAWNV-DVPDGSCYLYASRTAALSIS--YGGIQGADVEIELQEDKGGLPA 150
           +RAYWV+  +IAWNV ++   S  LYASR AA+S+S   GGIQG D ++ELQ +  GLP 
Sbjct: 6   ARAYWVTSDLIAWNVGELEAQSVCLYASRAAAMSLSPSNGGIQGYDSKVELQPESAGLPE 65
Query: 151 NVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAVA----DRKCSDATGLQLPGILDELFSY 206
            V +KFP I  Y+AF+VP+  D   L+KCQL VA    D K  D TGLQLPG+LD++F+Y
Sbjct: 66  TVTQKFPFISSYRAFRVPSSVDVASLVKCQLVVASFGADGKHVDVTGLQLPGVLDDMFAY 125
Query: 207 DGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWE 266
            GPLGA+++E++VSL+LWAPTAQ VS C +  P  G  LE VQLKE++GVWS+ GP+ WE
Sbjct: 126 TGPLGAVFSEDSVSLHLWAPTAQGVSVCFFDGP-AGPALETVQLKESNGVWSVTGPREWE 184
Query: 267 GCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEK 326
             YY+YEV VYHP+  Q+ KC A DPYAR LS++G RT LV+++++TLKP  WD+L  EK
Sbjct: 185 NRYYLYEVDVYHPTKAQVLKCLAGDPYARSLSANGARTWLVDINNETLKPASWDELADEK 244
Query: 327 PDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVH 386
           P + SFSDI+IYELH+RDFS  D TV  D RGG+ AF  Q SAG+ HL+KLS+AGLTHVH
Sbjct: 245 PKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVH 304
Query: 387 LLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPD 446
           LLP+F FAGVDD K NWK                             F D   L   PP 
Sbjct: 305 LLPSFHFAGVDDIKSNWK-----------------------------FVDECELATFPPG 335
Query: 447 STEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHV 506
           S  QQA + AIQ +D YNWGYNPVLWGVPKGSYAS+P+G  R IE+R+MVQALN IGL V
Sbjct: 336 SDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRV 395
Query: 507 VLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIID 566
           V+DVVYNHL  SGP   +SVLDK+VPGYY+RR+++G IE+S  MNNTASEH+MV+RLI+D
Sbjct: 396 VMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDRLIVD 455
Query: 567 DLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGE 626
           DLL WAVNYKVDGFRFDLMGHIMK TMM+AK AL SLT + HGVDGS IY+YGEGWDF E
Sbjct: 456 DLLNWAVNYKVDGFRFDLMGHIMKRTMMRAKSALQSLTTDAHGVDGSKIYLYGEGWDFAE 515
Query: 627 VAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGT 686
           VA+N RG+N SQ N+SGTGIGSFNDRIRDA+ GG+PFG PLQQGF TGL L+PNG   G 
Sbjct: 516 VARNQRGINGSQLNMSGTGIGSFNDRIRDAINGGNPFGNPLQQGFNTGLFLEPNGFYQGN 575
Query: 687 KAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETIS 746
           +A   + LA   D IQ+GLA NLRD+ L +  G   KGSE+ T+DG PV Y   P ETI+
Sbjct: 576 EADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGLPVGYTASPIETIN 635
Query: 747 YVSAHDNETLFDVVSLK-------------------------GIPFFHCGDEILRSKSLD 781
           YVSAHDNETLFDV+S+K                         GIPFFH GDEILRSKS+D
Sbjct: 636 YVSAHDNETLFDVISVKTPMILSVDERCRINHLASSMMALSQGIPFFHAGDEILRSKSID 695
Query: 782 RDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALE 841
           RDSYNSGDW N++DF+Y +NNWGVGLPP EKNE NWPL++PRL +PSFKP K HILAAL+
Sbjct: 696 RDSYNSGDWFNKLDFTYETNNWGVGLPPSEKNEDNWPLMKPRLENPSFKPAKGHILAALD 755
Query: 842 NFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDS 901
           +F D+L+IRYSSPLFRL TAN I++R+ FHNTGPS VPGVIVM IED     P ++QLD+
Sbjct: 756 SFVDILKIRYSSPLFRLSTANDIKQRVRFHNTGPSLVPGVIVMGIEDARGESPEMAQLDT 815
Query: 902 NYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRT 961
           N+SY+V +FN  P EVS   PAL     +LHP+QV S D +V+ S+YEA +G F +P RT
Sbjct: 816 NFSYVVTVFNVCPHEVSMDIPALASMGFELHPVQVNSSDTLVRKSAYEAATGRFTVPGRT 875
Query: 962 TSVFVEPR 969
            SVFVEPR
Sbjct: 876 VSVFVEPR 883
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae Pullulanase Complexed With Maltose Length = 1083 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query971
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 0.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 0.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 1e-174
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 1e-170
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 1e-162
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 1e-152
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 1e-104
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 6e-52
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 1e-37
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 2e-34
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 2e-23
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 7e-16
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 5e-12
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 1e-06
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 1e-10
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 5e-10
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 3e-07
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 1e-09
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 1e-09
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 8e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 6e-09
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 8e-09
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 2e-07
1cyg_A680 Cyclodextrin glucanotransferase; glycosyltransfera 2e-07
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 2e-06
1d3c_A686 Cyclodextrin glycosyltransferase; alpha-amylase, p 2e-06
3bmv_A683 Cyclomaltodextrin glucanotransferase; glycosidase, 4e-06
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 1e-05
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 1e-05
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 2e-05
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 3e-05
3aml_A755 OS06G0726400 protein; starch-branching, transferas 2e-04
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 3e-04
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 5e-04
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 5e-04
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 5e-04
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 6e-04
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 6e-04
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 7e-04
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
 Score =  995 bits (2575), Expect = 0.0
 Identities = 550/908 (60%), Positives = 662/908 (72%), Gaps = 62/908 (6%)

Query: 94  SRAYWVSESIIAWNVDVPDG-SCYLYASRTAALSISY--GGIQGADVEIELQEDKGGLPA 150
           +RAYWV+  +IAWNV   +  S  LYASR AA+S+S   GGIQG D ++ELQ +  GLP 
Sbjct: 6   ARAYWVTSDLIAWNVGELEAQSVCLYASRAAAMSLSPSNGGIQGYDSKVELQPESAGLPE 65

Query: 151 NVIEKFPHIRDYKAFKVPAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELFSY 206
            V +KFP I  Y+AF+VP+  D   L+KCQL V    AD K  D TGLQLPG+LD++F+Y
Sbjct: 66  TVTQKFPFISSYRAFRVPSSVDVASLVKCQLVVASFGADGKHVDVTGLQLPGVLDDMFAY 125

Query: 207 DGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQLKENDGVWSIKGPKSWE 266
            GPLGA+++E++VSL+LWAPTAQ VS C + D   G  LE VQLKE++GVWS+ GP+ WE
Sbjct: 126 TGPLGAVFSEDSVSLHLWAPTAQGVSVCFF-DGPAGPALETVQLKESNGVWSVTGPREWE 184

Query: 267 GCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEK 326
             YY+YEV VYHP+  Q+ KC A DPYAR LS++G RT LV+++++TLKP  WD+L  EK
Sbjct: 185 NRYYLYEVDVYHPTKAQVLKCLAGDPYARSLSANGARTWLVDINNETLKPASWDELADEK 244

Query: 327 PDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVH 386
           P + SFSDI+IYELH+RDFS  D TV  D RGG+ AF  Q SAG+ HL+KLS+AGLTHVH
Sbjct: 245 PKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVH 304

Query: 387 LLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPD 446
           LLP+F FAGVDD K NWK V                             D   L   PP 
Sbjct: 305 LLPSFHFAGVDDIKSNWKFV-----------------------------DECELATFPPG 335

Query: 447 STEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHV 506
           S  QQA + AIQ +D YNWGYNPVLWGVPKGSYAS+P+G  R IE+R+MVQALN IGL V
Sbjct: 336 SDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRV 395

Query: 507 VLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIID 566
           V+DVVYNHL  SGP   +SVLDK+VPGYY+RR+++G IE+S  MNNTASEH+MV+RLI+D
Sbjct: 396 VMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDRLIVD 455

Query: 567 DLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGE 626
           DLL WAVNYKVDGFRFDLMGHIMK TMM+AK AL SLT + HGVDGS IY+YGEGWDF E
Sbjct: 456 DLLNWAVNYKVDGFRFDLMGHIMKRTMMRAKSALQSLTTDAHGVDGSKIYLYGEGWDFAE 515

Query: 627 VAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGT 686
           VA+N RG+N SQ N+SGTGIGSFNDRIRDA+ GG+PFG PLQQGF TGL L+PNG   G 
Sbjct: 516 VARNQRGINGSQLNMSGTGIGSFNDRIRDAINGGNPFGNPLQQGFNTGLFLEPNGFYQGN 575

Query: 687 KAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETIS 746
           +A   + LA   D IQ+GLA NLRD+ L +  G   KGSE+ T+DG PV Y   P ETI+
Sbjct: 576 EADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGLPVGYTASPIETIN 635

Query: 747 YVSAHDNETLFDVVSLK-------------------------GIPFFHCGDEILRSKSLD 781
           YVSAHDNETLFDV+S+K                         GIPFFH GDEILRSKS+D
Sbjct: 636 YVSAHDNETLFDVISVKTPMILSVDERCRINHLASSMMALSQGIPFFHAGDEILRSKSID 695

Query: 782 RDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALE 841
           RDSYNSGDW N++DF+Y +NNWGVGLPP EKNE NWPL++PRL +PSFKP K HILAAL+
Sbjct: 696 RDSYNSGDWFNKLDFTYETNNWGVGLPPSEKNEDNWPLMKPRLENPSFKPAKGHILAALD 755

Query: 842 NFSDVLRIRYSSPLFRLRTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDS 901
           +F D+L+IRYSSPLFRL TAN I++R+ FHNTGPS VPGVIVM IED     P ++QLD+
Sbjct: 756 SFVDILKIRYSSPLFRLSTANDIKQRVRFHNTGPSLVPGVIVMGIEDARGESPEMAQLDT 815

Query: 902 NYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRT 961
           N+SY+V +FN  P EVS   PAL     +LHP+QV S D +V+ S+YEA +G F +P RT
Sbjct: 816 NFSYVVTVFNVCPHEVSMDIPALASMGFELHPVQVNSSDTLVRKSAYEAATGRFTVPGRT 875

Query: 962 TSVFVEPR 969
            SVFVEPR
Sbjct: 876 VSVFVEPR 883
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query971
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 99.95
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.87
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.77
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.73
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.69
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.67
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.66
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 98.35
1z0n_A96 5'-AMP-activated protein kinase, beta-1 subunit; b 97.85
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 97.72
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 97.55
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.31
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 96.24
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 96.16
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 95.51
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 94.76
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 94.18
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 93.86
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 93.13
1iv8_A720 Maltooligosyl trehalose synthase; beta alpha barre 92.67
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 90.71
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 90.67
3hje_A704 704AA long hypothetical glycosyltransferase; treha 90.4
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 88.63
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 87.55
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 87.44
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 87.35
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 87.06
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 86.95
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 86.09
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 86.01
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 85.63
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 85.59
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 84.6
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 84.1
3c8d_A403 Enterochelin esterase; alpha-beta-alpha sandwich, 83.9
2qlv_B252 Protein SIP2, protein SPM2; heterotrimer, ATP-bind 83.37
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 83.36
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 81.55
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 81.22
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 81.15
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 80.47
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 80.17
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 80.16
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
Probab=100.00  E-value=1.3e-140  Score=1304.95  Aligned_cols=850  Identities=65%  Similarity=1.119  Sum_probs=773.9

Q ss_pred             cccceeEEEeCCeeEeeCC-CCCCeEEEEEeCCCCeeee--cceeeccceEEEeeccCCCCChhhhhcCCcccccceeee
Q 002079           91 LLYSRAYWVSESIIAWNVD-VPDGSCYLYASRTAALSIS--YGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKV  167 (971)
Q Consensus        91 ~~~~~a~w~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~l~~~~~~~~p~l~~~~~~~~  167 (971)
                      |++|+|||||++||+|+++ .++.+++||+|++|+|+++  +++|+|++..|+|++.+++|+++|++|||||++|+||++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (884)
T 4aio_A            3 MPDARAYWVTSDLIAWNVGELEAQSVCLYASRAAAMSLSPSNGGIQGYDSKVELQPESAGLPETVTQKFPFISSYRAFRV   82 (884)
T ss_dssp             CCCCCEEEEETTEEEECCCTTTCSEEEEEEETTCCCBCCTTTCSCBSCSEEEEEEEETTCCCHHHHHHCGGGTTSEEEEC
T ss_pred             cccceEEEEcCCeEEeeCCCCCCceEEEEEcCCCCeeeecCCCceecCCceeEeeeCCCCCCHHHHhhCCcccCCeeeec
Confidence            7899999999999999976 4678999999999999997  457999988899998778999999999999999999999


Q ss_pred             CCccchHHHHHhhhhc----cccccccccccccccccccccCCCCCCccEEeCCeeEEEEEcCCCCeEEEEEecCCCCCC
Q 002079          168 PAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGN  243 (971)
Q Consensus       168 ~~~~~~~~~l~~q~~~----~~g~~~~~t~vq~~~~lD~~y~~~~~LGa~~~~~~v~F~vWAPtA~~V~L~ly~~~~~~~  243 (971)
                      +...+++++|||||+|    ++|+++++|+||+||+||++|+|++||||++++++|+|+||||+|++|+|++|+.... .
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~d~~~~y~~plGa~~~~~g~~F~vwAp~A~~V~l~l~~~~~~-~  161 (884)
T 4aio_A           83 PSSVDVASLVKCQLVVASFGADGKHVDVTGLQLPGVLDDMFAYTGPLGAVFSEDSVSLHLWAPTAQGVSVCFFDGPAG-P  161 (884)
T ss_dssp             CTTSCHHHHTTSEEEEEEECTTSSEEEEEEEECHHHHHHHHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEESTTTS-C
T ss_pred             CCcccHHHHhhcceEEEEECCCCCEeeccccccCcccccccccCCCccCEEECCEEEEEEECCCCCEEEEEEEeCCCC-C
Confidence            9888999999999998    8999999999999999999999999999999999999999999999999999986543 3


Q ss_pred             CceEEecccCCCEEEEEeCCCCCCceEEEEEEEecCCCccccceeecCccccccccCCCccEEEeCCCCCCCCCcccccc
Q 002079          244 PLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLV  323 (971)
Q Consensus       244 ~~~~~~M~~~~GvW~v~~~~~~~G~~Y~Y~v~~~~p~~g~~~~~~vtDPYa~~ls~ng~~s~vvdl~~~~~~p~~W~~~~  323 (971)
                      ..+.++|++.+|+|++++++...|.+|+|+|++++|..+++..++++||||++++.++.+|+++|++...++|.+|+...
T Consensus       162 ~~~~~~~~~~~g~W~~~~~~~~~g~~Y~y~v~~~~~~~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (884)
T 4aio_A          162 ALETVQLKESNGVWSVTGPREWENRYYLYEVDVYHPTKAQVLKCLAGDPYARSLSANGARTWLVDINNETLKPASWDELA  241 (884)
T ss_dssp             EEEEEECEEETTEEEEEEEGGGTTCEEEEEEEEEETTTTEEEEEEECCTTCSEESGGGSSEECCCTTCGGGSCTTGGGGG
T ss_pred             eeeeeeecCCCCEEEEEECCCCCCCEEEEEEeCCCCCcccccCccccCCCeeeeccCCCCeeEecCccCccCcccccccc
Confidence            33445557789999999999999999999999999998877778899999999999999999999999999999997655


Q ss_pred             cCCCCCCCCCCceEEEEEcccccccCCCCCCCCCcccccccccchhhhhhHHHHHHcCCcEEEeCCcccCCCCCcccccc
Q 002079          324 YEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENW  403 (971)
Q Consensus       324 ~~~P~~~~~~d~vIYElHVrdFs~~d~s~~~~~rG~y~g~~e~~s~~i~hL~~L~~lGvT~I~LlPvfd~~~v~e~~~~~  403 (971)
                      +++|...+++++||||+|||+||..++++++..||||+|++++.+..|+||+|||+||||||||||||+++++++.....
T Consensus       242 ~~~p~~~~~~~~vIYE~HVr~ft~~~~~~~~~~~Gtf~g~~~~~~~~ie~L~yLk~LGVtaveLmPv~e~~~~~~~~~~~  321 (884)
T 4aio_A          242 DEKPKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVHLLPSFHFAGVDDIKSNW  321 (884)
T ss_dssp             GTSCCCSCGGGCCEEEECHHHHHTTCTTSCTTTTTSGGGGSCTTSHHHHHHHHHHHHTCCEEEECCCEEESSSCSCGGGC
T ss_pred             cccCCCCCcccCEEEEEEcCccccCCCCCCccccCcccccccchhhHHHHhHHHHHcCCCEEEeccccccCccccccccc
Confidence            57787778999999999999999999999999999999999998889999999999999999999999999988765443


Q ss_pred             cccCCCCCccccccCCCcccceeeecCccccchhhhhhcCCCCChHHHHHHHhhcCCCCCCCCCCcCCCCCcCCCCCCCC
Q 002079          404 KSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNP  483 (971)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~ape~sYgt~~  483 (971)
                      ...                             |...+..+.+++.++|+++.+++..+.+||||||.+||+|+++|||++
T Consensus       322 ~~~-----------------------------d~~~l~~~~~~~~~~~~l~~~~~~~~~~~WGYd~~~y~a~~~~ygt~~  372 (884)
T 4aio_A          322 KFV-----------------------------DECELATFPPGSDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASDP  372 (884)
T ss_dssp             CCC-----------------------------CHHHHTTSCTTCSHHHHHHHHHTTTSSCCCCCCEEEEEEECGGGSSCS
T ss_pred             ccc-----------------------------ccccccccCCchHHHHhhhhhhhhccccccCcCcccccCCCcccccCc
Confidence            322                             567788889999999999999999999999999999999999999999


Q ss_pred             CCCchhHHHHHHHHHHHhcCCEEEEEEeeccccCCCCCCCCCccCCCCCcceeecCCCCccccCCCCCCCCCCCHHHHHH
Q 002079          484 NGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERL  563 (971)
Q Consensus       484 ~g~~ri~Efr~mV~alH~~Gi~VIlDvVyNHt~~~g~~~~~s~lDk~vP~YY~r~~~~G~~~~stc~~d~a~e~~mv~k~  563 (971)
                      +++.|++|||+||++||++||+||||||||||+..|+|+..+..++..|.||++...+|.+.+.+||++++++|++++++
T Consensus       373 d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts~~h~wf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  452 (884)
T 4aio_A          373 DGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDRL  452 (884)
T ss_dssp             STTHHHHHHHHHHHHHHHTTCEEEEEECCSBCSCCSSSSTTCCHHHHSTTTSBCBCTTSCBCCTTSSSBBCTTSHHHHHH
T ss_pred             cccchHHHHHHHHHHHHhcCCceeeeeccccccCCCcchhhccccccCcceeeccCCCCCccCcCCccccCCCCchhhhh
Confidence            99999999999999999999999999999999999999988889999999998888899999999999999999999999


Q ss_pred             HHHHHHHHHHhCCccEEEEecCCCCcHHHHHHHHHHHHhhcccccCCCCCCcEEecccccccccccccccccccccccCC
Q 002079          564 IIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSG  643 (971)
Q Consensus       564 i~Dsl~~W~~ey~IDGFRfDlm~~~~~~~~~~~~~al~~i~p~~~~~~~~~~~l~GEgWd~gev~~~~~~~~a~q~~~~g  643 (971)
                      |+|++++|+++|||||||||++.++.+..+......+..+..+...+++..+++++|+|+..+......+....|.++.+
T Consensus       453 ~~d~~~~w~~~~~vDg~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~  532 (884)
T 4aio_A          453 IVDDLLNWAVNYKVDGFRFDLMGHIMKRTMMRAKSALQSLTTDAHGVDGSKIYLYGEGWDFAEVARNQRGINGSQLNMSG  532 (884)
T ss_dssp             HHHHHHHHHHHSCCCEEEETTGGGSBHHHHHHHHHHHHTCCHHHHSSCGGGCEEEECCCCCGGGGGGTTSSBCCTTTTTT
T ss_pred             hhhhhhhhhhhcccccCCcccchhhhhHHHHhhhhhcccccccccccccccceecccCCcccccccccccccchhccCCc
Confidence            99999999999999999999999999999999999988887766566667899999999998877777777888999989


Q ss_pred             CcccccchHHHHHHcCCCCCCCCcccccccccccCCCCCCCCChHHHHHHHHHHHhhHHhhhcccchhhhccccCCcccc
Q 002079          644 TGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVK  723 (971)
Q Consensus       644 tgig~fnDrlRdavrgg~~F~~~~~~gf~~G~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnl~~~~~~~~~g~~~~  723 (971)
                      ..|+.|||++|+++++...++.....||..++...++++..+........+....+.+..++.+++.++.+.+..+....
T Consensus       533 ~~i~e~nd~~r~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~  612 (884)
T 4aio_A          533 TGIGSFNDRIRDAINGGNPFGNPLQQGFNTGLFLEPNGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKK  612 (884)
T ss_dssp             SSCEEEEHHHHHHHHCSCTTSCTTCCCTTTTTTTSCCSSCCCCHHHHHHHHHHHHHHHHHHHBTCBSSCEEECTTSCEEE
T ss_pred             ccchhhhhhHHhhhhccccccchhhhhhccccccchhhhhccccchhhhhhhhhhhhhhhccCcchhhhhccccchhhcc
Confidence            99999999999999998888777888999999888888888887777777888889999999999999999888888777


Q ss_pred             cccccccCCCCccccCCCCceeeeccccccccHHHHhc-------------------------CCCeeeEeccccccccC
Q 002079          724 GSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVS-------------------------LKGIPFFHCGDEILRSK  778 (971)
Q Consensus       724 Gs~~~~y~g~p~~ya~~P~~~iNyVs~HDn~tL~D~l~-------------------------~~GiPfiy~GdEigrSk  778 (971)
                      .+....+++.+.++...|.+.+||++|||++|+++.+.                         ..|+||||||+|+||++
T Consensus       613 ~~~~~~~~~~~~~~~~~p~~~~nfl~NHD~~r~~~~~~~~~~~~~~~~~r~~r~kla~alllt~pG~P~IY~GdEiG~t~  692 (884)
T 4aio_A          613 GSEIHTFDGLPVGYTASPIETINYVSAHDNETLFDVISVKTPMILSVDERCRINHLASSMMALSQGIPFFHAGDEILRSK  692 (884)
T ss_dssp             TTTSBCTTSCBSCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTSCHHHHHHHHHHHHHHHHTSBSEEEEETTGGGTCCC
T ss_pred             chhhhhhcccchhhccCchhhcccccCCCCCcccccccccccccccHHHHHHHHHHHHHHHHHcCCCcEEEcccccCccC
Confidence            77666678888889899999999999999999887543                         22999999999999999


Q ss_pred             CCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCcCCCCccccccCCCCCCCCchhhhHHHHHHHHHHHHHHHhcCccccc
Q 002079          779 SLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRL  858 (971)
Q Consensus       779 s~d~nsY~sgD~~N~~dw~~~~n~w~~GlP~~~~n~~~w~~i~~~l~~~~~~~~~~~~~~~~~~~k~Li~LRks~pafrl  858 (971)
                      .+++|+|+++||+|++||.+..++|+.+.+....+...|..+.+....++++++..+..+++++||+||+|||++|+|++
T Consensus       693 ~~~~n~y~~~~~~~~~D~~R~p~~W~~~~~~g~~~~~~w~~~~~~~~~~~v~~q~~d~~sl~~~yr~Li~LRk~~paL~~  772 (884)
T 4aio_A          693 SIDRDSYNSGDWFNKLDFTYETNNWGVGLPPSEKNEDNWPLMKPRLENPSFKPAKGHILAALDSFVDILKIRYSSPLFRL  772 (884)
T ss_dssp             TTCSCGGGSHHHHHCCCTTCSCCSCSSCCCCHHHHGGGHHHHHHHHTCGGGSCCHHHHHHHHHHHHHHHHHHTTCGGGGC
T ss_pred             CCCcccccCcchhcccccccCcCCcCcccCccccCCccccccccccccchhhhhhcchHHHHHHHHHHHHHHhcChhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhccceEEecCCCCCCCcEEEEEEEcCCCCCCCccccCCCCCEEEEEEeCCCCcEEEEcCCCCCCceEeecceecc
Q 002079          859 RTANAIQERICFHNTGPSAVPGVIVMSIEDGHEGVPGLSQLDSNYSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKS  938 (971)
Q Consensus       859 gt~~~i~~~v~f~~~g~~~~~gviv~~~~d~~~~~~~~~~~d~~~~~ivVv~N~s~~~~~~~lp~~~~~~~~l~~~~~~~  938 (971)
                      |++++|.+++.|++.++.+.+|+++|++.+..+........+...+.++||+|+++++++++||.+.+.++++++++..+
T Consensus       773 g~~~~i~~~~~~~~~~~~~~~gv~~~~~~d~~~~~~~~~~r~~~~~~llVv~N~s~~~~~v~LP~~~~~~~~l~~~~~~~  852 (884)
T 4aio_A          773 STANDIKQRVRFHNTGPSLVPGVIVMGIEDARGESPEMAQLDTNFSYVVTVFNVCPHEVSMDIPALASMGFELHPVQVNS  852 (884)
T ss_dssp             CSHHHHHHHEEECSCSTTCCTTEEEEEEECCCSSSCSSCCCCSSEEEEEEEEECSSSCEEEECGGGCSSCCEECHHHHTC
T ss_pred             CCHHHHhhcceeeccCccccCceEEEEeccCCCcceeEEEecCCCCEEEEEEeCCCCCEEEECCCCCCCceEEEEeeccC
Confidence            99999999999999999999999999999876543333344566789999999999999999998877889999998888


Q ss_pred             ccccccCcceeecCcEEEEcCceEEEEEEccC
Q 002079          939 VDEIVKNSSYEANSGCFVIPPRTTSVFVEPRA  970 (971)
Q Consensus       939 ~d~~v~~~~~~~~~g~~tVpa~S~aVfv~~~~  970 (971)
                      .+..+........+++|||||+|++||+++||
T Consensus       853 ~~~~~~~~~~~~~~~~ltvP~~S~~Vlv~~r~  884 (884)
T 4aio_A          853 SDTLVRKSAYEAATGRFTVPGRTVSVFVEPRC  884 (884)
T ss_dssp             SCTTGGGCEEETTTTEEEECTTEEEEEEEEC-
T ss_pred             CcccccCCceeccCCEEEECCCEEEEEEEecC
Confidence            88888777777778899999999999999997
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* Back     alignment and structure
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1 Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 971
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 3e-87
d2fhfa4118 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella 2e-39
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 2e-37
d2fhfa2125 b.1.18.2 (A:163-287) Pullulanase PulA {Klebsiella 2e-35
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 2e-22
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 8e-16
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 3e-04
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 2e-13
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 7e-13
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 2e-12
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 5e-09
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 2e-12
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 9e-05
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 4e-11
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-09
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 2e-09
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 8e-09
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 4e-08
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 2e-07
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 4e-07
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 0.001
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 4e-07
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 1e-06
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 1e-06
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 2e-06
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 3e-06
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 4e-06
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 6e-06
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 1e-05
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 1e-05
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 8e-05
d1iv8a2 653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 2e-04
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 2e-04
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 3e-04
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 5e-04
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 6e-04
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 7e-04
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 7e-04
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 0.003
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Pullulanase PulA
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  289 bits (738), Expect = 3e-87
 Identities = 213/575 (37%), Positives = 310/575 (53%), Gaps = 45/575 (7%)

Query: 316 PEGWDKLV--YEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSH 373
           PEGWD L   + +      + ++I+E H+RD S  D TV  + RG YLA T Q S  V H
Sbjct: 1   PEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQH 60

Query: 374 LKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKS 433
           LK+LS +G+TH+ LLP F  A V++  +    +      +    +   S      C   S
Sbjct: 61  LKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGS 120

Query: 434 FADAEVLEKLP---PDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTI 490
             +  + +       D+ + QA  T +   D YNWGY+P  + VP+GSYA++P G+ R  
Sbjct: 121 TVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARIK 180

Query: 491 EFRRMVQALNH-IGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSD-GFIEHST 548
           EFR M+QA+   +G++V++DVVYNH   +GP D  SVLDK+VP YY R N   G +E +T
Sbjct: 181 EFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESAT 240

Query: 549 CMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIH 608
           C +++A EH M  +LI D L  W  +YK+DGFRFDLM +  K+ ++ A   + +L  +  
Sbjct: 241 CCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALNPD-- 298

Query: 609 GVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQ 668
                 IY +GEGWD  +   + R   ASQ NL GTGIG+F+DR+RDA+ GG PF     
Sbjct: 299 ------IYFFGEGWDSNQ---SDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDA 349

Query: 669 QGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVK 728
                G+        +    + +       D  ++G+A NL DF L + +G   +GSE+ 
Sbjct: 350 LRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEI- 408

Query: 729 TYDGTPVAYALCPTETISYVSAHDNETLFDVVS-------------------------LK 763
            Y+G P  YA  PTE ++YVS HDN+TL+D++S                          +
Sbjct: 409 DYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQ 468

Query: 764 GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPR 823
           GI F   G E+LRSKS  RDSY+SGDW NR+D+S   NN+ VG+P    +  N+ +I  R
Sbjct: 469 GIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDII-AR 527

Query: 824 LADPSFKPQKSHILAALENFSDVLRIRYSSPLFRL 858
           + D    P ++ +      + ++  +R SSPLF L
Sbjct: 528 VKDAVATPGETELKQMTAFYQELTALRKSSPLFTL 562
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 118 Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure
>d2fhfa2 b.1.18.2 (A:163-287) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 125 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query971
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d2fhfa2125 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.94
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.86
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.86
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.84
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.53
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.51
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.41
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.38
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 97.7
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.68
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.68
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 97.46
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 96.92
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 96.89
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 96.7
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 96.48
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 96.29
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 96.23
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 95.57
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 95.46
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 95.2
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 95.15
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 94.41
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 93.11
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 92.75
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 92.17
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 90.99
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 89.86
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 89.6
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 88.95
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 88.33
d1ji1a1122 Maltogenic amylase, N-terminal domain N {Thermoact 87.97
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 87.08
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 87.08
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 85.91
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 85.9
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 85.66
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 85.21
d1nofa1106 Glycosyl hydrolase family 5 xylanase {Erwinia chry 84.49
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 84.35
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 83.34
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 82.49
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 80.63
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Pullulanase PulA
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6e-69  Score=621.90  Aligned_cols=525  Identities=41%  Similarity=0.720  Sum_probs=394.5

Q ss_pred             CCcccccccCCCCCC----CCCCceEEEEEcccccccCCCCCCCCCcccccccccchhhhhhHHHHHHcCCcEEEeCCcc
Q 002079          316 PEGWDKLVYEKPDIL----SFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTF  391 (971)
Q Consensus       316 p~~W~~~~~~~P~~~----~~~d~vIYElHVrdFs~~d~s~~~~~rG~y~g~~e~~s~~i~hL~~L~~lGvT~I~LlPvf  391 (971)
                      |++|+..  +.|...    .++++||||+|||+|+.++++++...+|||+||+++.+++|+||+||++||||+|||||||
T Consensus         1 ~~~~~~~--~~~~~~~~~~~~~~~viYei~vr~F~d~~~d~~~~~~G~f~~~~~~~~~~i~~LdyL~~LGVtaiwL~Pi~   78 (563)
T d2fhfa5           1 PEGWDGL--TMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVF   78 (563)
T ss_dssp             CTTGGGC--CCSSCCSSHHHHHTCEEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEEESCCE
T ss_pred             CCCCCCC--CCccccCCCCCHHHcEEEEecchhhhccCCCCccccCcChhhccccCcchhhhHHHHHHcCCCEEEeCCcc
Confidence            7899986  555442    3579999999999999999999999999999999998889999999999999999999999


Q ss_pred             cCCCCCcccccccccCCCCCccccccCCCcccceeeec-Cccccch--hhhhhcCCCCChHHHHHHHhhcCCCCCCCCCC
Q 002079          392 QFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCAC-GIKSFAD--AEVLEKLPPDSTEQQAQITAIQNDDGYNWGYN  468 (971)
Q Consensus       392 d~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYd  468 (971)
                      ++++++++....................+-.....+.+ +.+...+  ........................+.+|||||
T Consensus        79 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~wGYd  158 (563)
T d2fhfa5          79 DLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYD  158 (563)
T ss_dssp             EESSSCCCGGGCCCTTSBHHHHHHHCHHHHTSTTGGGTTSSCBHHHHHHHHSTTCBTTBCHHHHHHHHHTTSSSCCCCCC
T ss_pred             cCCccccccccccccccccccccccccccchhhhhhhccccchhhhhhhcccccccchhhhhhcccccccccCcCCCCCC
Confidence            99988764322111000000000000000000000000 0000000  00011112223334444445566778999999


Q ss_pred             cCCCCCcCCCCCCCCCCCchhHHHHHHHHHH-HhcCCEEEEEEeeccccCCCCCCCCCccCCCCCcceeecCCC-Ccccc
Q 002079          469 PVLWGVPKGSYASNPNGSCRTIEFRRMVQAL-NHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSD-GFIEH  546 (971)
Q Consensus       469 p~~y~ape~sYgt~~~g~~ri~Efr~mV~al-H~~Gi~VIlDvVyNHt~~~g~~~~~s~lDk~vP~YY~r~~~~-G~~~~  546 (971)
                      +.+||+|+++|||.++...+++|||+||+++ |++||+||||+|+|||+..|+|+..+..+...|.+|++.... +...+
T Consensus       159 v~dy~~i~p~~Gt~~d~~~~l~Efk~lV~a~~H~rGIkVIlD~V~NHts~~h~wf~~~~~~~~~~~~y~~~~~~~~~~~~  238 (563)
T d2fhfa5         159 PFHYTVPEGSYATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVES  238 (563)
T ss_dssp             EEEEEEECSTTSSCCSTTHHHHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCC
T ss_pred             hhhcccccCccCcCcchhhHHHHHHHHHHHHhhccCceeeecCcccccCCCCCchhhcccCCCCCcceeccCCCCCcccC
Confidence            9999999999999998889999999999988 899999999999999999999998887777777777666554 44555


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHhCCccEEEEecCCCCcHHHHHHHHHHHHhhcccccCCCCCCcEEecccccccc
Q 002079          547 STCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGE  626 (971)
Q Consensus       547 stc~~d~a~e~~mv~k~i~Dsl~~W~~ey~IDGFRfDlm~~~~~~~~~~~~~al~~i~p~~~~~~~~~~~l~GEgWd~ge  626 (971)
                      .+|++.++.+++++++++.+++.+|+.++++||||+|++.++++.++......+....        +.+++++|.|+...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~dg~r~D~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  310 (563)
T d2fhfa5         239 ATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALN--------PDIYFFGEGWDSNQ  310 (563)
T ss_dssp             TTSSEEBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHTTC--------TTCEEEECCCCCSC
T ss_pred             CCCCcccCccchhHHHHHHHhhHHHHhhhcccccchhhhhhcchhhhhhhhHHHhhhC--------cccccccccccccc
Confidence            7788999999999999999999999999999999999999999999999998888877        46899999997544


Q ss_pred             cccccccccccccccCCCcccccchHHHHHHcCCCCCCCCc----ccccccccccCCCCCCCCChHHHHHHHHHHHhhHH
Q 002079          627 VAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPL----QQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQ  702 (971)
Q Consensus       627 v~~~~~~~~a~q~~~~gtgig~fnDrlRdavrgg~~F~~~~----~~gf~~G~~~~~n~~~~g~~~~~~~~l~~~~d~i~  702 (971)
                      ..   ....+.+....+..++.|++.+|+++++..+|....    ..++..+....+....... ...   .....+..+
T Consensus       311 ~~---~~~~~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~  383 (563)
T d2fhfa5         311 SD---RFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLS-DDQ---ARHLADLTR  383 (563)
T ss_dssp             TT---TSCBCCTTTTTTSSCEEECHHHHHHHHCSCTTCCTTHHHHCCCGGGTTTTSCCSSCCCC-HHH---HHHHHHHHH
T ss_pred             cc---cccccccccCCcchhHHHhHHHHHHHHhccccccccchhhcccccccchhhhhhhhccc-chh---hhhhhhhhh
Confidence            22   112334555556789999999999999977765321    2344444333333322211 111   222345677


Q ss_pred             hhhcccchhhhccccCCcccccccccccCCCCccccCCCCceeeeccccccccHHHHhc---------------------
Q 002079          703 VGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVS---------------------  761 (971)
Q Consensus       703 ~glaGnl~~~~~~~~~g~~~~Gs~~~~y~g~p~~ya~~P~~~iNyVs~HDn~tL~D~l~---------------------  761 (971)
                      .++.+++..+.+....+....+... .+.....++...+...+||++|||+.|+.+.+.                     
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vnfl~NHD~~r~~~~~~~~~~~~~~~~~~~~~~kla~~  462 (563)
T d2fhfa5         384 LGMAGNLADFVLIDKDGAVKRGSEI-DYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLA  462 (563)
T ss_dssp             HHHTTCBTTCEEECTTSCEEEGGGS-EETTEESCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTCCHHHHHHHHHHHHH
T ss_pred             cccccchhhhhccchhhhhhhcchh-hhccccccccCCccceeeeeccCCcccccccccccCCCcccHHHHHHHHHHHHH
Confidence            8899999998888877777766654 455555566778889999999999999876442                     


Q ss_pred             ----CCCeeeEeccccccccCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCcCCCCccccccCCCCCCCCchhhhHH
Q 002079          762 ----LKGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHIL  837 (971)
Q Consensus       762 ----~~GiPfiy~GdEigrSks~d~nsY~sgD~~N~~dw~~~~n~w~~GlP~~~~n~~~w~~i~~~l~~~~~~~~~~~~~  837 (971)
                          ..||||||||+||||+|.+++++|++++++++|+|+...++|+.+.|....+...|..... ....++.++..+..
T Consensus       463 ~llt~pG~P~IYyGeEiG~t~~~~~~~y~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~q~~d~~  541 (563)
T d2fhfa5         463 TVMLGQGIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIAR-VKDAVATPGETELK  541 (563)
T ss_dssp             HHHTSSSEEEEETTGGGTCCCTTCSCCTTSHHHHHCCCTTCSCCSCSSSCCCHHHHGGGHHHHHH-HTTSSCCCCHHHHH
T ss_pred             HHHHhcCccEEEcCcccCCcCCCCcccccCcccccccccccCccCCcccCcccCCCccccccccc-cccccccccccCHH
Confidence                2399999999999999999999999999999999999999999999998888888876543 34566777788888


Q ss_pred             HHHHHHHHHHHHHhcCcccccC
Q 002079          838 AALENFSDVLRIRYSSPLFRLR  859 (971)
Q Consensus       838 ~~~~~~k~Li~LRks~pafrlg  859 (971)
                      +++++||+||+|||++|+||.|
T Consensus       542 sl~~~yr~Li~LRk~~pal~~G  563 (563)
T d2fhfa5         542 QMTAFYQELTALRKSSPLFTLG  563 (563)
T ss_dssp             HHHHHHHHHHHHHTSCGGGGCC
T ss_pred             HHHHHHHHHHHHHhCCHhhcCC
Confidence            9999999999999999999986
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d2fhfa2 b.1.18.2 (A:163-287) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure