Citrus Sinensis ID: 002323

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930------
MGWFRAGSSVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQMPRSFGARKSQ
cccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEHHHHHccccccccEEEEEEEHHHHccccHHHHHHHccccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEcccccccccccccccEEEEcccccEEEcccccccccccccEEEEcccHHHHHHHHHcccccccccccEEEEcccccccccccEEEEEcccccHHHHHccccccEEEcccccccccccccccHHHHHHHcccccccccccccHHHHHHcccccEEEEEcccHHHHHHHHHHHcccccccccEEEccccccccccccccHHccccccccccccccccccEEccccccccccccccccEEEEEccHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHcccccccccccccccc
ccEEEccHHHHHHHHccccccccccccccccccHHccccccHccccHHcccccccccHHHHHHccHcccccHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHccccHHHcccEEEEccEEcccccccccccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHcccHHHHHHHHccccccccccccEcccccEEEccccccccccccccEEEEEEEEccccEEEEccEEEEEEEEEEcccccccccEEEEEEEEccHHHccccEEHHHHcccccccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEccccccccEEccEEEEEEccccccEEEHHHcccccccccEEEEEccccHHHHHHHHHcccccccccEEEEEHcccccccccEEEEEHHHccHHHHHHHHccHEEEccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHccEEEccccHHHHHHHHHHHHHccccccEEEEccHHHcccHHHHccHHHHHccccccccccccccccEccccccHHcccHHHcEEEEEEccHEHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccccEEEccccccccccc
MGWFRAGSSVAKLAIKRTLsqgcsyttrtrivpsqtrhfhstvfkskaqsapvprpvplskltdsfldgtsSVYLEELQRAweadpnsvdesWDNFFRNFVgqaatspgisgqTIQESMRLLLLVRAYQVnghmkakldplgleereipedldpalygfteadldrEFFIGVWRmagflsenrpvQTLRSILTRLEQAYCGSIGYEYMHIADRDQCnwlrdkietptpmqynRQRREVILDRLIWSTQFENFLATKWTtakrfgleggetlIPGMKEMFDRAADLGVEsivigmphrgrlnvlgnvvrkpLRQIFsefsggtkpvdedglytgtgdvkyhlgtsydrptrggkrihlslvanpshleavdpvvvgktrakqyyshdvdrtknmgvlihgdgsfagqGVVYETLHlsalpnyttggtIHIVVNNqvafttdpragrssqyctDAVVHVCELAAEWRQKFHSDVVVDLVCYrrfghneidepsftqpkmyqvirSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEfmaskdyvpkrRDWLSAYWagfkspeqvsrirntgvkpEILKNVGKAItnlpenfkphrgvKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEgnhvrlsgqdvergtfshrhsvlhdqetgekycpldhvmmnqdeemftvsnsslsefgVLGFElgysmenpnsLVLWEAqfgdfangaQVIFDQFLSSGESKWLRQTGLVVllphgydgqgpehsSARLERFLqmsddnpfvipemdpTLRKQIQECNWqivnvttpanYFHVLRRQIhrgfrkplivispknllrhkdcksnlsefddvqghpgfdkqGTRFKRLIkdqnghsdlEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSvslndiqmprsfgarksq
mgwfragssVAKLAIKrtlsqgcsyttrtrivpsqtrhFHSTvfkskaqsapvprpvplsKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAatspgisgqTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAgflsenrpVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIEtptpmqynrqrREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFsefsggtkpvdedgLYTGTGDVKYHLGTSYDRPTRGGKRIHLslvanpshleavdpvvvGKTRAKQyyshdvdrtknMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHneidepsftqpKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEefmaskdyvpkRRDWLSAYWagfkspeqvsrirntgvkPEILKNVGKaitnlpenfkphrgvKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRhsvlhdqetgekYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQihrgfrkplivispknllrhKDCKSNlsefddvqghpgfdkqGTRFKRLIkdqnghsdleegIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVslndiqmprsfgarksq
MGWFRAGSSVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQMPRSFGARKSQ
********SVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFH*************************FLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLH***TGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYD**********************FVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCK*********************FKRLI*******DLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDI************
***F****SV*******************************************************FLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPT***YNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDY******WL**YWA*F**********NTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQM***F******
*********VAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHST***********PRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQMPR********
*GW***GSSVAKLAIK***************************************PVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQA******SGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKP****GLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQMP*********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGWFRAGSSVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDAVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESxxxxxxxxxxxxxxxxxxxxxEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGRSAVQVMLQFAGWNSFVLSHMTWFSVSLNDIQMPRSFGARKSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query936 2.2.26 [Sep-21-2011]
Q54JE41013 2-oxoglutarate dehydrogen yes no 0.912 0.843 0.504 0.0
O743781009 2-oxoglutarate dehydrogen yes no 0.861 0.798 0.497 0.0
P209671014 2-oxoglutarate dehydrogen yes no 0.899 0.830 0.461 0.0
Q5RCB81023 2-oxoglutarate dehydrogen yes no 0.900 0.824 0.455 0.0
Q60HE21023 2-oxoglutarate dehydrogen N/A no 0.900 0.824 0.455 0.0
Q022181023 2-oxoglutarate dehydrogen yes no 0.900 0.824 0.455 0.0
O611991029 2-oxoglutarate dehydrogen yes no 0.853 0.776 0.472 0.0
Q5XI781023 2-oxoglutarate dehydrogen yes no 0.901 0.825 0.453 0.0
Q605971023 2-oxoglutarate dehydrogen yes no 0.901 0.825 0.453 0.0
Q623T01027 2-oxoglutarate dehydrogen N/A no 0.851 0.776 0.473 0.0
>sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=ogdh PE=3 SV=1 Back     alignment and function desciption
 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/917 (50%), Positives = 605/917 (65%), Gaps = 63/917 (6%)

Query: 13  LAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLSKLTDSFLDGTSS 72
             +K+ +++    + +  ++ S  +   STV         + +P    +L++SFLDGTSS
Sbjct: 2   FTLKQVINKSIQTSMKNGVMSSAVKRSFSTV-------GGINQPKSRKELSESFLDGTSS 54

Query: 73  VYLEELQRAWEADPNSVDESWDNFFRNF-----VGQAATSPGISGQTI------------ 115
            Y+E++   W  DP SV  SW +FF +       G+A  SP   G ++            
Sbjct: 55  TYVEDMFANWVKDPKSVHPSWASFFESSERGVPAGEAFMSPPTLGSSVATKATPSTYTSS 114

Query: 116 ------QESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFF 169
                  +SMRLLLLVRAYQV GH  A LDPLGLE +E P + +PA YGFTEAD+DR  F
Sbjct: 115 GSPKQVSDSMRLLLLVRAYQVRGHALANLDPLGLEVKEEPAEFNPAKYGFTEADMDRPIF 174

Query: 170 IGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPM 229
           +G   ++GFL+  +P  TLR +L RL++ YCG IG EYMHI DR+ C+W+RDK ET  P+
Sbjct: 175 VGEGFISGFLTNKQPETTLRQVLKRLKETYCGDIGIEYMHIQDREMCDWIRDKFETSQPV 234

Query: 230 QYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVES 289
           +   + +  IL+RL W+ QFE FL  K+   +RFGL+G E+LIPGMK M D A + GVES
Sbjct: 235 EIPDKEKIKILERLSWADQFEGFLGLKYRATRRFGLDGCESLIPGMKAMIDTATEDGVES 294

Query: 290 IVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPT 349
           IV+GMPHRGRLNVL NVVRKPL  IF+EF+GG   +  +G Y+ TGDVKYHLGTSYDR T
Sbjct: 295 IVLGMPHRGRLNVLANVVRKPLPAIFNEFNGGV--ISIEGEYSATGDVKYHLGTSYDRVT 352

Query: 350 RGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVV 409
             GK++HLSLVANPSHLEAV+P+V GK RAKQ+YS D ++ K+M V +HGD S AGQGVV
Sbjct: 353 SSGKKVHLSLVANPSHLEAVNPLVEGKVRAKQHYSKDTEQKKSMAVQLHGDASVAGQGVV 412

Query: 410 YETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD----------------- 452
           YETLHLS L NY+TGGT+HIVVNNQ+ FTT+P+  RSS+YCTD                 
Sbjct: 413 YETLHLSNLDNYSTGGTVHIVVNNQIGFTTNPKYSRSSKYCTDVAKTIDIPVFHVNGDNV 472

Query: 453 -AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIY 511
            AVV VC++AAEWRQKF  DV VD+VCYR+ GHNE D+P FTQP MY  I       E Y
Sbjct: 473 EAVVKVCKIAAEWRQKFKRDVFVDIVCYRKHGHNETDQPKFTQPIMYDKIGKQQPIIEKY 532

Query: 512 QKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRI 571
             KL+    +TQE   +++  ++    + +     +VP   DWL + W GFKSP ++   
Sbjct: 533 SNKLIAEKVITQEQYLQMKNIIHESYEKGYQDGMKHVPNAEDWLESRWEGFKSPIELGNP 592

Query: 572 RNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATL 631
             TG+  ++L+ +GK +   P  F+ H  +K++ +++  M + G G DWA  EALAF +L
Sbjct: 593 GRTGIDQDLLQKIGKVLYTEPSGFEVHSTIKRLLKEKKDMFDKGTGFDWATAEALAFGSL 652

Query: 632 LVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHV---MMNQDEEMFTVSNSSL 688
           L++GNHVRLSGQDVERGTFSHRH+V HDQ+T + Y PL  +   +  +D   F  SNSSL
Sbjct: 653 LLDGNHVRLSGQDVERGTFSHRHAVWHDQKTDQTYAPLTKLATALGKKDAAEFVASNSSL 712

Query: 689 SEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLP 748
           SEF VLGFELGYS+ENP++L+LWEAQFGDF+NGAQVI DQF+SSGE KW+RQ+GL +LLP
Sbjct: 713 SEFAVLGFELGYSLENPDALILWEAQFGDFSNGAQVIIDQFISSGEQKWMRQSGLTMLLP 772

Query: 749 HGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVL 808
           HGYDG GPEHSS R+ER+LQ+ D +P  IP  +   RKQ Q CN Q++N +TP NYFH L
Sbjct: 773 HGYDGAGPEHSSCRIERYLQLCDSDPNKIPPKEEAERKQSQHCNMQVLNCSTPVNYFHAL 832

Query: 809 RRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHS 868
           RRQ+HR FRKPL++ +PK LLR++   S   EF +       D     +     DQ    
Sbjct: 833 RRQVHRDFRKPLVIATPKYLLRYEKSFSTAKEFSN-------DSFTRLYPEAFPDQ---I 882

Query: 869 DLEEGIRRLVLCSGKVF 885
           +  E I R+V C+G+V+
Sbjct: 883 NKPEKINRIVFCTGQVY 899
The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).
Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 2EC: .EC: 4EC: .EC: 2
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1 Back     alignment and function description
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1 Back     alignment and function description
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1 Back     alignment and function description
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3 Back     alignment and function description
>sp|O61199|ODO1_CAEEL 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T22B11.5 PE=1 SV=2 Back     alignment and function description
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1 Back     alignment and function description
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3 Back     alignment and function description
>sp|Q623T0|ODO1_CAEBR 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis briggsae GN=CBG01737 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query936
2241095801021 predicted protein [Populus trichocarpa] 0.945 0.866 0.910 0.0
2555751201021 2-oxoglutarate dehydrogenase, putative [ 0.945 0.866 0.909 0.0
2241009291021 predicted protein [Populus trichocarpa] 0.945 0.866 0.906 0.0
4494599281022 PREDICTED: 2-oxoglutarate dehydrogenase, 0.945 0.865 0.902 0.0
4494499701021 PREDICTED: 2-oxoglutarate dehydrogenase, 0.945 0.866 0.882 0.0
4494838891021 PREDICTED: 2-oxoglutarate dehydrogenase, 0.945 0.866 0.881 0.0
306942421017 2-oxoglutarate dehydrogenase, E1 compone 0.944 0.869 0.877 0.0
70767841009 2-oxoglutarate dehydrogenase, E1 subunit 0.944 0.876 0.877 0.0
2977941871025 E1 subunit of 2-oxoglutarate dehydrogena 0.945 0.863 0.874 0.0
2978168341017 hypothetical protein ARALYDRAFT_485968 [ 0.944 0.869 0.874 0.0
>gi|224109580|ref|XP_002315242.1| predicted protein [Populus trichocarpa] gi|222864282|gb|EEF01413.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1738 bits (4502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 822/903 (91%), Positives = 864/903 (95%), Gaps = 18/903 (1%)

Query: 1   MGWFRAGSSVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLS 60
           M WFRAGS VA+LAI+RTLSQG SY TR+R++P Q R+FHSTVFKSKAQ+APVPRPVPLS
Sbjct: 1   MAWFRAGSGVARLAIRRTLSQGGSYATRSRVIPPQNRYFHSTVFKSKAQAAPVPRPVPLS 60

Query: 61  KLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR 120
           KLTD+FLDGTSSVYLEELQRAWE DPNSVDESWDNFF+NFVGQAATSPGISGQTIQESMR
Sbjct: 61  KLTDNFLDGTSSVYLEELQRAWETDPNSVDESWDNFFKNFVGQAATSPGISGQTIQESMR 120

Query: 121 LLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLS 180
           LLLLVRAYQVNGHMKAKLDPLGLEEREIP+DLDPALYGFT+ADLDREFF+GVWRMAGFLS
Sbjct: 121 LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTDADLDREFFLGVWRMAGFLS 180

Query: 181 ENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVIL 240
           ENRPVQTLR+ILTRLEQAYCGSIGYEYMHIADR++CNWLRDKIETPT MQYNRQRREVIL
Sbjct: 181 ENRPVQTLRAILTRLEQAYCGSIGYEYMHIADREKCNWLRDKIETPTSMQYNRQRREVIL 240

Query: 241 DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL 300
           DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDR+ADLGVESIVIGMPHRGRL
Sbjct: 241 DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL 300

Query: 301 NVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360
           NVLGNVVRKPLRQIFSEFSGGTKPVDE GLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
Sbjct: 301 NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360

Query: 361 ANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPN 420
           ANPSHLEAVDPVVVGKTRAKQYYS+D DRTKNMG+LIHGDGSFAGQGVVYETLHLSALPN
Sbjct: 361 ANPSHLEAVDPVVVGKTRAKQYYSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPN 420

Query: 421 YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD------------------AVVHVCELAA 462
           YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD                  AVVHVCELAA
Sbjct: 421 YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAA 480

Query: 463 EWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVT 522
           EWRQ FHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIR+HPSA EIY+KKLLES QVT
Sbjct: 481 EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVT 540

Query: 523 QEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEILK 582
           +EDI+RIQEKV +ILNEEF+ASKDYVPKRRDWLS++W GFKSPEQ+SR+RNTGVKPEILK
Sbjct: 541 EEDISRIQEKVLSILNEEFLASKDYVPKRRDWLSSHWTGFKSPEQLSRVRNTGVKPEILK 600

Query: 583 NVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSG 642
           NVGKAIT  PENFKPHR VKKVYEQR QMIETGEGIDWAVGEALAFATLLVEGNHVRLSG
Sbjct: 601 NVGKAITTFPENFKPHRAVKKVYEQRLQMIETGEGIDWAVGEALAFATLLVEGNHVRLSG 660

Query: 643 QDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSM 702
           QDVERGTFSHRHSV+HDQETGEKYCPLDHV+MNQDEEMFTVSNSSLSEFGVLGFELGYSM
Sbjct: 661 QDVERGTFSHRHSVVHDQETGEKYCPLDHVVMNQDEEMFTVSNSSLSEFGVLGFELGYSM 720

Query: 703 ENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSAR 762
           E+PNSLV+WEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLV+LLPHGYDGQGPEHSSAR
Sbjct: 721 ESPNSLVIWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVLLLPHGYDGQGPEHSSAR 780

Query: 763 LERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIV 822
           LERFLQMSDDNP+VIPEM+PTLRKQIQECNWQ+VNVTTPANYFHVLRRQIHR FRKPL+V
Sbjct: 781 LERFLQMSDDNPYVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLVV 840

Query: 823 ISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSG 882
           I+PKNLLRHK+CKSNLSEFDDVQGHPGFDKQGTRFKRLIKD+N HSDLEEGIRRLVLCSG
Sbjct: 841 IAPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDRNDHSDLEEGIRRLVLCSG 900

Query: 883 KVF 885
           K++
Sbjct: 901 KIY 903

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255575120|ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gi|223532141|gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224100929|ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449459928|ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] gi|449518101|ref|XP_004166082.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449449970|ref|XP_004142737.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449483889|ref|XP_004156723.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30694242|ref|NP_191101.2| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gi|332645860|gb|AEE79381.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7076784|emb|CAB75899.1| 2-oxoglutarate dehydrogenase, E1 subunit-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297794187|ref|XP_002864978.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] gi|297310813|gb|EFH41237.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297816834|ref|XP_002876300.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] gi|297322138|gb|EFH52559.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query936
TAIR|locus:20999811017 AT3G55410 [Arabidopsis thalian 0.481 0.443 0.904 0.0
TAIR|locus:21700001025 AT5G65750 [Arabidopsis thalian 0.482 0.440 0.896 0.0
WB|WBGene000206791029 ogdh-1 [Caenorhabditis elegans 0.803 0.730 0.493 3.6e-211
UNIPROTKB|O611991029 T22B11.5 "2-oxoglutarate dehyd 0.803 0.730 0.493 3.6e-211
UNIPROTKB|Q623T01027 CBG01737 "2-oxoglutarate dehyd 0.803 0.732 0.495 6.6e-210
TIGR_CMR|SPO_0344985 SPO_0344 "2-oxoglutarate dehyd 0.345 0.327 0.532 6.9e-210
FB|FBgn0010352 1105 Nc73EF "Neural conserved at 73 0.818 0.693 0.492 6.1e-207
POMBASE|SPBC3H7.03c1009 SPBC3H7.03c "2-oxoglutarate de 0.795 0.738 0.465 2.7e-193
CGD|CAL0006070996 KGD1 [Candida albicans (taxid: 0.810 0.762 0.461 1e-189
DICTYBASE|DDB_G02881271013 ogdh "2-oxoglutarate dehydroge 0.599 0.553 0.548 1.4e-183
TAIR|locus:2099981 AT3G55410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2168 (768.2 bits), Expect = 0., Sum P(2) = 0.
 Identities = 409/452 (90%), Positives = 433/452 (95%)

Query:     1 MGWFRAGSSVAKLAIKRTLSQGCSYTTRTRIVPSQTRHFHSTVFKSKAQSAPVPRPVPLS 60
             M WFRAGSSV KLA++R L+QG SY TRTR +PSQTR FHST+ + KAQSAPVPR VPLS
Sbjct:     1 MVWFRAGSSVTKLAVRRILNQGASYATRTRSIPSQTRSFHSTICRPKAQSAPVPRAVPLS 60

Query:    61 KLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR 120
             KLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
Sbjct:    61 KLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR 120

Query:   121 LLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLS 180
             LLLLVRAYQVNGHMKAKLDPLGLE+REIPEDLD ALYGFTEADLDREFF+GVW+M+GF+S
Sbjct:   121 LLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLDLALYGFTEADLDREFFLGVWQMSGFMS 180

Query:   181 ENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVIL 240
             ENRPVQTLRSILTRLEQAYCG+IG+EYMHIADRD+CNWLR+KIETPTP +YNR+RREVIL
Sbjct:   181 ENRPVQTLRSILTRLEQAYCGNIGFEYMHIADRDKCNWLREKIETPTPWRYNRERREVIL 240

Query:   241 DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL 300
             DRL WSTQFENFLATKWTTAKRFGLEGGE+LIPGMKEMFDRAADLGVESIVIGM HRGRL
Sbjct:   241 DRLAWSTQFENFLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVESIVIGMSHRGRL 300

Query:   301 NVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360
             NVLGNVVRKPLRQIFSEFSGG +PVDE G YTGTGDVKYHLGTSYDRPTRGGK+IHLSLV
Sbjct:   301 NVLGNVVRKPLRQIFSEFSGGIRPVDEVG-YTGTGDVKYHLGTSYDRPTRGGKKIHLSLV 359

Query:   361 ANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPN 420
             ANPSHLEA D VVVGKTRAKQYYS+D+DRTKN+G+LIHGDGSFAGQGVVYETLHLSALPN
Sbjct:   360 ANPSHLEAADSVVVGKTRAKQYYSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPN 419

Query:   421 YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD 452
             YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD
Sbjct:   420 YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD 451
GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006099 "tricarboxylic acid cycle" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA
GO:0030976 "thiamine pyrophosphate binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IDA
GO:0050897 "cobalt ion binding" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=RCA
TAIR|locus:2170000 AT5G65750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00020679 ogdh-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|O61199 T22B11.5 "2-oxoglutarate dehydrogenase, mitochondrial" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q623T0 CBG01737 "2-oxoglutarate dehydrogenase, mitochondrial" [Caenorhabditis briggsae (taxid:6238)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0344 SPO_0344 "2-oxoglutarate dehydrogenase, E1 component" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
FB|FBgn0010352 Nc73EF "Neural conserved at 73EF" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
POMBASE|SPBC3H7.03c SPBC3H7.03c "2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0006070 KGD1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288127 ogdh "2-oxoglutarate dehydrogenase, E1 subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q1RHI4ODO1_RICBR1, ., 2, ., 4, ., 20.40110.83860.8468yesno
Q59106ODO1_CUPNH1, ., 2, ., 4, ., 20.41570.82690.8147yesno
Q60597ODO1_MOUSE1, ., 2, ., 4, ., 20.45340.90170.8250yesno
Q5XI78ODO1_RAT1, ., 2, ., 4, ., 20.45340.90170.8250yesno
P0AFG4ODO1_ECOL61, ., 2, ., 4, ., 20.40220.83110.8338yesno
Q92J42ODO1_RICCN1, ., 2, ., 4, ., 20.40090.83220.8394yesno
Q54JE4ODO1_DICDI1, ., 2, ., 4, ., 20.50490.91230.8430yesno
Q68XI7ODO1_RICTY1, ., 2, ., 4, ., 20.40730.81510.8177yesno
P20967ODO1_YEAST1, ., 2, ., 4, ., 20.46120.89950.8303yesno
Q9ZDY3ODO1_RICPR1, ., 2, ., 4, ., 20.41170.81620.8162yesno
Q02218ODO1_HUMAN1, ., 2, ., 4, ., 20.45510.90060.8240yesno
P20707ODO1_AZOVI1, ., 2, ., 4, ., 20.40680.83220.8260yesno
P45303ODO1_HAEIN1, ., 2, ., 4, ., 20.38900.82050.8213yesno
Q5RCB8ODO1_PONAB1, ., 2, ., 4, ., 20.45510.90060.8240yesno
Q72PJ7ODO1_LEPIC1, ., 2, ., 4, ., 20.42840.82150.8358yesno
P51056ODO1_COXBU1, ., 2, ., 4, ., 20.40770.82790.8297yesno
Q148N0ODO1_BOVIN1, ., 2, ., 4, ., 20.45030.90170.8250yesno
Q8F6S7ODO1_LEPIN1, ., 2, ., 4, ., 20.42840.82150.8358yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.2.40.921
4th Layer1.2.4.20.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_X2288
hypothetical protein (1021 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_XIV0422
hypothetical protein (373 aa)
• ••••• 0.995
estExt_Genewise1_v1.C_LG_XI2803
hypothetical protein (467 aa)
• ••••• 0.992
LPD1
precursor of dehydrogenase dihydrolipoamide dehydrogenase 1 (EC-1.8.1.4) (511 aa)
• ••••• 0.981
LPD4
precursor of dehydrogenase dihydrolipoamide dehydrogenase 4 (EC-1.8.1.4) (529 aa)
•    •• 0.934
LPD3
precursor of dehydrogenase dihydrolipoamide dehydrogenase 3 (EC-1.8.1.4) (527 aa)
•    •• 0.934
grail3.0032001601
hypothetical protein (434 aa)
• ••••• 0.926
estExt_fgenesh4_pg.C_LG_XVI0781
SubName- Full=Putative uncharacterized protein; (363 aa)
   •••• 0.921
eugene3.00280188
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (361 aa)
   •••• 0.921
estExt_fgenesh4_pg.C_660173
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (371 aa)
   • •• 0.918
estExt_fgenesh4_pg.C_LG_VII0812
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (367 aa)
   • •• 0.918

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query936
PRK09404924 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 co 0.0
COG0567906 COG0567, SucA, 2-oxoglutarate dehydrogenase comple 0.0
PRK122701228 PRK12270, kgd, alpha-ketoglutarate decarboxylase; 0.0
TIGR00239929 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenas 0.0
cd02016265 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate 1e-166
pfam02779172 pfam02779, Transket_pyr, Transketolase, pyrimidine 4e-50
pfam00676303 pfam00676, E1_dh, Dehydrogenase E1 component 1e-43
smart00861136 smart00861, Transket_pyr, Transketolase, pyrimidin 7e-25
TIGR03182315 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E 1e-05
COG1071358 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogena 2e-04
cd02000293 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph 0.002
>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information 
 Score = 1186 bits (3070), Expect = 0.0
 Identities = 419/859 (48%), Positives = 531/859 (61%), Gaps = 82/859 (9%)

Query: 62  LTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNF---------------VGQAAT 106
           L  SFL G ++ Y+EEL   +  DP+SVDE W  FF                    + A 
Sbjct: 9   LDSSFLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAHSAVRESFRRLAK 68

Query: 107 SPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDR 166
              +S       +++L L+ AY+  GH+ A LDPLGL +R    +LDPA YG TEADLDR
Sbjct: 69  PARVSSAVSDPQVKVLQLINAYRFRGHLAANLDPLGLWKRPDVPELDPAFYGLTEADLDR 128

Query: 167 EFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETP 226
            F  G         E     TLR I+  L++ YCGSIG EYMHI+D ++  WL+ +IE+ 
Sbjct: 129 TFNTGSL---ALGKETA---TLREIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESG 182

Query: 227 TPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLG 286
            P  ++ + ++ IL+RL  +  FE FL TK+   KRF LEGGE+LIP + E+  RA  LG
Sbjct: 183 RP-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKRFSLEGGESLIPMLDEIIRRAGKLG 241

Query: 287 VESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYD 346
           V+ IVIGM HRGRLNVL NV+ KP R +F+EF G   P +  G    +GDVKYHLG S D
Sbjct: 242 VKEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLG----SGDVKYHLGFSSD 297

Query: 347 RPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQ-YYSHDVDRTKNMGVLIHGDGSFAG 405
           R T GG+ +HLSL  NPSHLE V+PVV G  RA+Q       DR K + +LIHGD +FAG
Sbjct: 298 RETDGGE-VHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDGQDRKKVLPILIHGDAAFAG 356

Query: 406 QGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD------------- 452
           QGVV ETL+LS L  Y TGGTIHIV+NNQ+ FTT P   RS+ YCTD             
Sbjct: 357 QGVVAETLNLSQLRGYRTGGTIHIVINNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVN 416

Query: 453 -----AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSA 507
                AVV    LA E+RQKF  DVV+DLVCYRR GHNE DEPSFTQP MY+ I+ HP+ 
Sbjct: 417 GDDPEAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHNEGDEPSFTQPLMYKKIKKHPTT 476

Query: 508 FEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQ 567
            E+Y  KL+    +T+E+ + +  +    L+  F   K++ P   DWL+  W+ +   E 
Sbjct: 477 RELYADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWRPA--DWLAGDWSPYLGHEW 534

Query: 568 VSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALA 627
                +TGV  E LK + + +T +PE FK H  VKK+ E R +M E  + IDW + EALA
Sbjct: 535 DDP-VDTGVPLERLKELAEKLTTVPEGFKVHPKVKKILEDRREMAEGEKPIDWGMAEALA 593

Query: 628 FATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEEMFTVSNSS 687
           FA+LL EG  VRLSGQD  RGTFSHRH+VLHDQ+TGE Y PL+H+   Q    F V +S 
Sbjct: 594 FASLLDEGYPVRLSGQDSGRGTFSHRHAVLHDQKTGETYIPLNHLSEGQAS--FEVYDSP 651

Query: 688 LSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLL 747
           LSE  VLGFE GYS   PN+LV+WEAQFGDFANGAQV+ DQF+SSGE KW R +GLV+LL
Sbjct: 652 LSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQFISSGEQKWGRLSGLVMLL 711

Query: 748 PHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHV 807
           PHGY+GQGPEHSSARLERFLQ+  ++                  N Q+ N TTPA YFH+
Sbjct: 712 PHGYEGQGPEHSSARLERFLQLCAED------------------NMQVCNPTTPAQYFHL 753

Query: 808 LRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGH 867
           LRRQ  R FRKPL+V++PK+LLRH    S+L E    +G          F+ +I D +  
Sbjct: 754 LRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEEL--AEG---------SFQPVIGDIDEL 802

Query: 868 SDLEEGIRRLVLCSGKVFI 886
               + ++R+VLCSGKV+ 
Sbjct: 803 DP--KKVKRVVLCSGKVYY 819

Length = 924
>gnl|CDD|223641 COG0567, SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|161785 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>gnl|CDD|238974 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>gnl|CDD|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|201386 pfam00676, E1_dh, Dehydrogenase E1 component Back     alignment and domain information
>gnl|CDD|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|234139 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>gnl|CDD|223997 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 936
KOG04501017 consensus 2-oxoglutarate dehydrogenase, E1 subunit 100.0
PRK122701228 kgd alpha-ketoglutarate decarboxylase; Reviewed 100.0
COG0567906 SucA 2-oxoglutarate dehydrogenase complex, dehydro 100.0
TIGR00239929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 100.0
PRK09404924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 100.0
KOG0451913 consensus Predicted 2-oxoglutarate dehydrogenase, 100.0
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 100.0
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 100.0
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 100.0
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 100.0
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 100.0
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 100.0
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 100.0
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 100.0
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 100.0
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 100.0
COG0022324 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
PRK12315581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
KOG0525362 consensus Branched chain alpha-keto acid dehydroge 99.96
TIGR00204617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 99.94
PRK05899624 transketolase; Reviewed 99.93
KOG0524359 consensus Pyruvate dehydrogenase E1, beta subunit 99.92
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 99.91
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 99.91
PLN02582677 1-deoxy-D-xylulose-5-phosphate synthase 99.88
PRK12571641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 99.87
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 99.85
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 99.85
PTZ00182355 3-methyl-2-oxobutanate dehydrogenase; Provisional 99.85
PRK11892464 pyruvate dehydrogenase subunit beta; Provisional 99.84
PLN02234641 1-deoxy-D-xylulose-5-phosphate synthase 99.83
CHL00144327 odpB pyruvate dehydrogenase E1 component beta subu 99.8
PRK09212327 pyruvate dehydrogenase subunit beta; Validated 99.79
PLN02683356 pyruvate dehydrogenase E1 component subunit beta 99.78
PLN02225701 1-deoxy-D-xylulose-5-phosphate synthase 99.78
PLN02790654 transketolase 99.75
PRK12754663 transketolase; Reviewed 99.73
PTZ00089661 transketolase; Provisional 99.71
PRK12753663 transketolase; Reviewed 99.7
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 99.66
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 99.63
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.21
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 99.19
PRK05261785 putative phosphoketolase; Provisional 99.06
COG1154627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 99.02
TIGR03186 889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 98.91
PRK09405 891 aceE pyruvate dehydrogenase subunit E1; Reviewed 98.85
PRK13012 896 2-oxoacid dehydrogenase subunit E1; Provisional 98.79
KOG0523632 consensus Transketolase [Carbohydrate transport an 98.77
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 98.75
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 98.31
COG0021663 TktA Transketolase [Carbohydrate transport and met 98.23
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 98.16
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 97.99
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 97.96
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 97.84
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 97.74
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 97.72
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 97.62
TIGR00759 885 aceE pyruvate dehydrogenase E1 component, homodime 97.45
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 97.44
PRK07524535 hypothetical protein; Provisional 97.43
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 97.43
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 97.39
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 97.25
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 97.21
PRK07092530 benzoylformate decarboxylase; Reviewed 97.18
PRK08327569 acetolactate synthase catalytic subunit; Validated 97.14
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 97.13
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 97.13
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 97.06
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 97.03
PRK06163202 hypothetical protein; Provisional 97.02
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 97.0
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 96.88
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 96.86
PRK08155564 acetolactate synthase catalytic subunit; Validated 96.82
PRK08266542 hypothetical protein; Provisional 96.8
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 96.75
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 96.7
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 96.69
PRK06112578 acetolactate synthase catalytic subunit; Validated 96.68
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 96.65
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 96.5
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 96.47
PRK11269591 glyoxylate carboligase; Provisional 96.44
PRK07064544 hypothetical protein; Provisional 96.36
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 96.36
PRK09124574 pyruvate dehydrogenase; Provisional 96.35
PRK06154565 hypothetical protein; Provisional 96.32
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 96.28
PRK06546578 pyruvate dehydrogenase; Provisional 96.2
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 96.07
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 96.04
PRK12474518 hypothetical protein; Provisional 96.0
CHL00099585 ilvB acetohydroxyacid synthase large subunit 95.97
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 95.93
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 95.91
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 95.87
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 95.81
PRK07586514 hypothetical protein; Validated 95.8
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 95.67
PRK08199557 thiamine pyrophosphate protein; Validated 95.66
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 95.66
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 95.57
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 95.52
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 95.51
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 95.46
PRK08617552 acetolactate synthase; Reviewed 95.43
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 95.41
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 95.4
PRK08273597 thiamine pyrophosphate protein; Provisional 95.4
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 95.33
PLN02573578 pyruvate decarboxylase 95.3
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 95.22
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 95.18
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 95.1
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 95.06
PRK05858542 hypothetical protein; Provisional 95.04
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 94.9
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 94.82
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 94.81
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 94.79
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 94.78
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 94.75
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 94.68
PLN02470585 acetolactate synthase 94.54
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 94.45
PRK06457549 pyruvate dehydrogenase; Provisional 94.44
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 94.36
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 94.34
PRK08611576 pyruvate oxidase; Provisional 94.22
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 94.08
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 93.99
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 93.74
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 93.67
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 93.19
PRK08322547 acetolactate synthase; Reviewed 93.17
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 92.78
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 92.54
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 92.22
COG3957793 Phosphoketolase [Carbohydrate transport and metabo 92.12
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 91.25
TIGR03336 595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 91.16
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 90.79
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 90.01
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 89.6
PRK08366 390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 85.5
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 85.12
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 82.4
PRK07119352 2-ketoisovalerate ferredoxin reductase; Validated 82.4
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 81.19
PRK09622 407 porA pyruvate flavodoxin oxidoreductase subunit al 80.58
>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-254  Score=2113.18  Aligned_cols=824  Identities=63%  Similarity=1.076  Sum_probs=783.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCCCCHHHHHHHhhccC------CCCCCCC---------------
Q 002323           51 APVPRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVG------QAATSPG---------------  109 (936)
Q Consensus        51 ~~~~~~~~~~~~~~s~l~g~Na~YIEelY~~y~~DP~SVd~sWr~~F~~l~~------~~~~~~~---------------  109 (936)
                      .+.++.++++...++||+|+++.||||||+.|++||+|||.||++||++..+      ++++.|+               
T Consensus        35 ~~~~r~~~~~~~td~Fl~g~ss~YveEmy~AW~~dP~SVh~SWDayFrn~~~~~~~~~~a~~~p~~~~~~~~~t~~~~~~  114 (1017)
T KOG0450|consen   35 QQVPRSVAASVATDPFLSGTSSSYVEEMYRAWLEDPNSVHKSWDAYFRNVSAGAPPPAQASQAPLSRSAAVAGTQSAVAA  114 (1017)
T ss_pred             ccccccccCcccccccccCcchHHHHHHHHHHHcCCchhhhhHHHHHHhcccCCCCccccccCCCccccccccccccccc
Confidence            5567778888889999999999999999999999999999999999998843      1222221               


Q ss_pred             -----CChhhHHHHHHHHHHHHHHhhcCccccccCCCCCCC---C-----CCCCCCCccccCCCcccccceeecCccccc
Q 002323          110 -----ISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEE---R-----EIPEDLDPALYGFTEADLDREFFIGVWRMA  176 (936)
Q Consensus       110 -----~~~~~~~~~~~v~~lI~ayr~~GH~~A~lDPL~~~~---~-----~~~~~L~~~~~gl~~~dl~~~~~~~~~~~~  176 (936)
                           .+++.+.++++|+.|||||+.+||..|+|||||+..   +     +.+++|++.+|||+|+|||++|.+.   ++
T Consensus       115 ~~~t~~s~~~v~~hl~vqlLiRaYQirGH~~A~LDPLGi~~~~~~~~~p~~i~~~~~l~~Ygf~E~DLDref~L~---~t  191 (1017)
T KOG0450|consen  115 RPNTGISDKTVEDHLKVQLLIRAYQIRGHHKAKLDPLGINDADLDSSVPADIPEELTLAFYGFTEADLDREFHLP---TT  191 (1017)
T ss_pred             ccCCCcccccHHHHHHHHHHHHHHHhcccccccCCccccccccccccCCCCCChhhhhhhcCCchhhccceeccC---Cc
Confidence                 234678999999999999999999999999999843   1     2466799999999999999999984   45


Q ss_pred             ccccCCCCCcCHHHHHHHHHHHhcCCccccccccCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 002323          177 GFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATK  256 (936)
Q Consensus       177 ~~~~~~~~~~tl~ei~~~L~~~YCg~ig~E~~hi~~~e~r~Wl~~~iE~~~~~~ls~e~~~~il~~M~~ar~fE~fl~~k  256 (936)
                      +|++++++.+|||||+++|+++||++||+|||||.|.++|+||++|||++....++.|+|+-||++|+++..||+||++|
T Consensus       192 ~Fi~~~~~~ltLreIl~rlE~~YC~~igvEfmhI~~~eqcnWir~k~EtP~~~q~s~e~k~~il~RL~~st~FE~FLa~K  271 (1017)
T KOG0450|consen  192 TFIGGGESSLTLREILRRLEKAYCGSIGVEFMHINDLEQCNWIRQKFETPGPMQYSHEQKRVILDRLTRSTRFEEFLATK  271 (1017)
T ss_pred             ccccCCCccccHHHHHHHHHHHhhccceeEEEeeCcHHHhHHHHHhccCCCccccCHHHHHHHHHHHHHhhHHHHHHhhh
Confidence            78888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccccccCCcchhhhhHHHHHHHHhhCCCCcEEecCCCCchHHHHHhhcCCCHHHHHHhhcCCCCCCCCCCCccCCCC
Q 002323          257 WTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGD  336 (936)
Q Consensus       257 ~~~~KrfgleG~Eali~gl~~li~~A~~~Gv~DivigM~HRgrlnvLa~vlg~p~~~ifaEf~G~~~~~~~G~~~ggsGD  336 (936)
                      |+..||||+||||++||||+.+++.++++||+++|+||+||||||+|+||+.||+++||+||.|... ..     .||||
T Consensus       272 w~seKRFGLEGcE~lIP~mK~iiDrS~elGVe~iviGMpHRGRLNvL~NVvRKpl~qIfseF~g~~~-~D-----eGSGD  345 (1017)
T KOG0450|consen  272 WPSEKRFGLEGCEVLIPAMKTIIDRSSELGVESIVIGMPHRGRLNVLANVVRKPLEQIFSEFSGLEA-AD-----EGSGD  345 (1017)
T ss_pred             CCccccccccchhhhhhHHHHHhhhhhhcCchheEecCCccchhHHHHHHHhhHHHHHHHhccCCCC-Cc-----CCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999443 33     37999


Q ss_pred             cccccccccCCCCC-CCceeeeeeccccCCCccccceeechhHHHHHhcCCCCCCceEEEEEecCcccCCCchHHHhhhc
Q 002323          337 VKYHLGTSYDRPTR-GGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHL  415 (936)
Q Consensus       337 VkyHlG~s~~~~~~-~g~~I~lsl~~NPSHLeav~PVa~G~ArA~q~~~~d~~~~~~v~v~~hGDgA~sGQGvv~EtLNl  415 (936)
                      ||||||.+.++.+. +|+.|+|+|++||||||+++|||+|++||.|++.+|.+++|+|.|++||||||+|||||||||++
T Consensus       346 VKYHLG~~~~R~~r~s~k~i~LslVANPSHLEA~DPVV~GKtrA~q~y~~D~~~~k~m~ILiHGDaaFAgQGVVyET~hl  425 (1017)
T KOG0450|consen  346 VKYHLGMYYERPNRVSGKNITLSLVANPSHLEAVDPVVMGKTRAEQFYTGDEEGKKVMGILIHGDAAFAGQGVVYETFHL  425 (1017)
T ss_pred             eeeeeccccccccccCCceeEEEEecCchhhcccCceeechHHHHHHhccccccceeEEEEEecchhhccCceEEEeecc
Confidence            99999999999988 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccccEEEEEEeCCcccccCCCCCCCcchhhH------------------HHHHHHHHHHHHHHccCCCEEEEEE
Q 002323          416 SALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD------------------AVVHVCELAAEWRQKFHSDVVVDLV  477 (936)
Q Consensus       416 A~LP~Y~~GGtIhIV~NNQigfTT~~~~~rss~y~tD------------------AV~~a~~~A~e~rr~f~~pvlIdlv  477 (936)
                      +.||+|+||||||||+||||||||+|+.+|||+||||                  ||..+|+.|.|||.+|++||+||+|
T Consensus       426 s~LP~YtT~GTvHvVvNNQIgFTTDPR~aRSspYcTDvar~v~aPIFHVNaDD~EAV~~vc~vAAeWR~tFh~DvVVDlV  505 (1017)
T KOG0450|consen  426 SDLPSYTTGGTVHVVVNNQIGFTTDPRFARSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRKTFHKDVVVDLV  505 (1017)
T ss_pred             ccCCCcccCCeEEEEEccccccccCcccccCCCCchhHHHHhCCCeEeecCCChHHHHHHHHHHHHHHHHhccCeEEEEE
Confidence            9999999999999999999999999999999999998                  9999999999999999999999999


Q ss_pred             eeecCCCCCCCCCCCCCHHHHHHHHcCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCc-cchhh
Q 002323          478 CYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKR-RDWLS  556 (936)
Q Consensus       478 ~YRr~GHne~Ddp~ytqp~~y~~i~~~~dpl~~y~~~Li~eGilt~eei~~i~~~~~~~l~~a~~~A~~~~p~~-~~~~~  556 (936)
                      ||||+||||.|+|+||||.||++|++|++++++|.++|+++|.+|++|+++..+++...+++||+.++++.|.. .+|++
T Consensus       506 cyRR~GHNE~DeP~FTQPlMYk~I~k~~~~l~~Y~ekLl~egtvs~~evd~~~~k~~~I~eeafe~sKd~~~~~~rdWL~  585 (1017)
T KOG0450|consen  506 CYRRHGHNEIDEPMFTQPLMYKQIRKHKPVLQKYAEKLLSEGTVSQQEVDEEIKKYDNILEEAFERSKDYKPLHIRDWLD  585 (1017)
T ss_pred             EEeecCCCcccCccccchHHHHHHHcCCcHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHhhccccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999865 89999


Q ss_pred             hhccCCCCccccc---ccCCCCCChHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHhcCCcccHHHHHHHHhhhhhh
Q 002323          557 AYWAGFKSPEQVS---RIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLV  633 (936)
Q Consensus       557 ~~w~~~~~~~~~~---~~~~Tgv~~~~l~~i~~~~~~~P~~f~~h~~l~r~l~~R~~~~~~~~~iDWa~aE~LAfgsLl~  633 (936)
                      .+|.+|+.|+...   ..++|||+.+.|+.||+++.++||+|++|+.|+|+|+.|.+|+++ ++||||+||+|||||||.
T Consensus       586 spW~gF~spd~~~~i~~~~~Tgv~~e~L~~ig~~~ss~PE~F~~Hrgl~Ril~~R~~mi~~-~~iDwal~EalAFgsLl~  664 (1017)
T KOG0450|consen  586 SPWPGFFSPDGQPKILPCPSTGVKEEILKHIGKVASSVPEGFKIHRGLKRILKNRAQMIKS-EGVDWALAEALAFGSLLK  664 (1017)
T ss_pred             CCCccccCccCCCccccCCCCCCCHHHHHHHHHhhccCCcccchhhhHHHHHHHHHHhhhh-cccchHHHHHHHHHHHHh
Confidence            9999999874322   256799999999999999999999999999999999999999998 889999999999999999


Q ss_pred             cCCcEEEecccCCCcccccccceeeecCCC-ceeecCCCCcccCCCcceEEEccCcchhHHHHHHhhhccCCCCcceeee
Q 002323          634 EGNHVRLSGQDVERGTFSHRHSVLHDQETG-EKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWE  712 (936)
Q Consensus       634 eg~~Vrl~GqDv~rGtF~~RHavl~dq~t~-~~y~pL~~l~~~~~~g~~rV~nspLSE~avlG~e~G~sl~g~~~LviwE  712 (936)
                      ||.+||||||||+||||||||+|||||+++ ++|+||++|.  .+|+++.|+||.|||+||||||+||||++|+.|||||
T Consensus       665 EG~hVRlSGQDVERGTFShRH~VLHDQ~~d~~~y~PlnhL~--~~Qa~ytV~NSSLSEygVLGFElGYsm~sPNaLVlWE  742 (1017)
T KOG0450|consen  665 EGIHVRLSGQDVERGTFSHRHHVLHDQEVDKRTYIPLNHLW--PNQAPYTVCNSSLSEYGVLGFELGYSMASPNALVLWE  742 (1017)
T ss_pred             cCceEEeecccccccccccchhhhcccccCcceecchhhcC--CCCCceeeeccchhhhheecceecccccCCCceEEee
Confidence            999999999999999999999999999999 8999999999  7899999999999999999999999999999999999


Q ss_pred             ccchhhhhhHHHHHHHHHhhhhhhhcCccccEEEcCccCCCCCccccCchhhhhhhcCCCCCCcccCCCchhhhhccccc
Q 002323          713 AQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECN  792 (936)
Q Consensus       713 aqFgDF~n~Aq~iidqfi~~~~~kw~~~s~lv~~lPhG~~G~GpeHSs~RiERfLQl~~~~~~~~~~~pg~~~~~~~~~N  792 (936)
                      ||||||+|+||+||||||++|++||.+++||||+|||||+|+||||||+|+|||||||+|||++||.....+.+|+|+||
T Consensus       743 AQFGDFaNtAQ~IiDQFIssGqaKW~rqsGlVllLPHGyeG~GPEHSSaR~ERfLQm~nddp~~~p~~~~~~~~Ql~dcN  822 (1017)
T KOG0450|consen  743 AQFGDFANTAQCIIDQFISSGQAKWVRQSGLVLLLPHGYEGMGPEHSSARPERFLQMSNDDPDVFPDEEEFLQRQLQDCN  822 (1017)
T ss_pred             hhhccccccchhhHHhHhccchhhhhhhcCeEEEccCCcCCCCcccccccHHHHHHhccCCCccCCcccHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999987655889999999


Q ss_pred             eEEEEcCCHHHHHHHHHHHHhcCCCCcEEEEccccccCCCCCCCCcccccccCCCCCCCCCCCceeEeecCCCCCCCCCC
Q 002323          793 WQIVNVTTPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEE  872 (936)
Q Consensus       793 ~~Vv~pstpa~~fhlLrrq~~r~~~~Pli~~~pK~Llr~~~~~S~l~ef~~~~~~~~~~~pg~~F~~vi~d~~~~~~~~~  872 (936)
                      |+||||||||||||+|||||+|+||||||+|+||+|||||.|+|+++||.+          |+.||+||+|....+.+|+
T Consensus       823 w~vvn~tTPaNyfHvLRRQi~~~FRKPliif~pKsLLRHp~arS~~~ef~~----------g~~fq~vi~e~g~~~~~pe  892 (1017)
T KOG0450|consen  823 WQVVNCTTPANYFHVLRRQIHRPFRKPLIIFTPKSLLRHPEARSSFSEFDE----------GTGFQRVIPEDGKAAQNPE  892 (1017)
T ss_pred             eEEEecCChHHHHHHHHHHhhhcccCceEEeccHHhhcCccccCCHHHhcc----------CCCCceeccccccccCChh
Confidence            999999999999999999999999999999999999999999999999996          6789999999777778899


Q ss_pred             CccEEEEeCchhHHHHHHhhcccC
Q 002323          873 GIRRLVLCSGKVFITSLMKGGRSA  896 (936)
Q Consensus       873 ~v~rvilcsGkvyydL~~~r~~~~  896 (936)
                      +|||||||||||||||.++|++.+
T Consensus       893 ~vkrlv~csGkVyydL~k~Rk~~~  916 (1017)
T KOG0450|consen  893 NVKRLVFCSGKVYYDLTKERKEVG  916 (1017)
T ss_pred             hceEEEEecceEehhhhHHHHhcC
Confidence            999999999999999999999877

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query936
2jgd_B933 E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 1e-172
2jgd_A933 E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 1e-172
2xta_A868 Crystal Structure Of The Suca Domain Of Mycobacteri 1e-166
2xt6_A1113 Crystal Structure Of Mycobacterium Smegmatis Alpha- 1e-166
>pdb|2JGD|B Chain B, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933 Back     alignment and structure 
Iteration: 1

 Score =  602 bits (1553), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 350/870 (40%), Positives = 476/870 (54%), Gaps = 92/870 (10%)
Query: 62  LTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQ----- 116
           L  S+L G +  ++E+L   +  DP+SVD +W + F+   G          QT +     
Sbjct: 10  LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRL 69
Query: 117 ------------------ESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYG 158
                             + +++L L+ AY+  GH  A LDPLGL +++   DLDP+ + 
Sbjct: 70  AKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHD 129
Query: 159 FTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNW 218
            TEAD    F +G +      +  +    L  +L  L+Q YCG IG EYMHI   ++  W
Sbjct: 130 LTEADFQETFNVGSF------ASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRW 183
Query: 219 LRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEM 278
           ++ +IE+     +N + ++  L  L  +   E +L  K+  AKRF LEGG+ LIP +KEM
Sbjct: 184 IQQRIESGRAT-FNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEM 242
Query: 279 FDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVK 338
              A + G   +V+GM HRGRLNVL NV+ K  + +F EF+G  K       + GTGDVK
Sbjct: 243 IRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKE------HLGTGDVK 296
Query: 339 YHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIH 398
           YH+G S D  T GG  +HL+L  NPSHLE V PVV+G  RA+     +    K + + IH
Sbjct: 297 YHMGFSSDFQTDGG-LVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIH 355
Query: 399 GDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTT-DPRAGRSSQYCTD----- 452
           GD +  GQGVV ETL++S    Y  GGT+ IV+NNQV FTT +P   RS+ YCTD     
Sbjct: 356 GDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMV 415
Query: 453 -------------AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQ 499
                        AV  V  LA ++R  F  DV +DLVCYRR GHNE DEPS TQP MYQ
Sbjct: 416 QAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQ 475
Query: 500 VIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYW 559
            I+ HP+  +IY  KL +    T ED   +       L+       ++ P   +  S  W
Sbjct: 476 KIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPM--NMHSFTW 533
Query: 560 AGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGID 619
           + + + E      N  V+ + L+ + K I+ +PE  +    V K+Y  R  M    +  D
Sbjct: 534 SPYLNHEWDEEYPNK-VEMKRLQELAKRISTVPEAVEMQSRVAKIYADRQAMAAGEKLFD 592
Query: 620 WAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEE 679
           W   E LA+ATL+ EG  VRLSG+D  RGTF HRH+V+H+Q  G  Y PL H+   Q   
Sbjct: 593 WGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQG-- 650
Query: 680 MFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLR 739
            F V +S LSE  VL FE GY+   P +L +WEAQFGDFANGAQV+ DQF+SSGE KW R
Sbjct: 651 AFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR 710
Query: 740 QTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVT 799
             GLV+LLPHGY+GQGPEHSSARLER+LQ+                    E N Q+   +
Sbjct: 711 MCGLVMLLPHGYEGQGPEHSSARLERYLQL------------------CAEQNMQVCVPS 752
Query: 800 TPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKR 859
           TPA  +H+LRRQ  RG R+PL+V+SPK+LLRH    S+L E  +    P   +       
Sbjct: 753 TPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGE------- 805
Query: 860 LIKDQNGHSDLEEGIRRLVLCSGKVFITSL 889
            I + +      +G++R+V+CSGKV+   L
Sbjct: 806 -IDELD-----PKGVKRVVMCSGKVYYDLL 829
>pdb|2JGD|A Chain A, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933 Back     alignment and structure
>pdb|2XTA|A Chain A, Crystal Structure Of The Suca Domain Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase In Complex With Acetyl-Coa (Triclinic Form) Length = 868 Back     alignment and structure
>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query936
2jgd_A933 2-oxoglutarate dehydrogenase E1 component; flavopr 0.0
2xt6_A1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 0.0
2yic_A868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 8e-06
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Length = 933 Back     alignment and structure
 Score = 1309 bits (3391), Expect = 0.0
 Identities = 345/866 (39%), Positives = 470/866 (54%), Gaps = 92/866 (10%)

Query: 62  LTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAA---------------- 105
           L  S+L G +  ++E+L   +  DP+SVD +W + F+   G                   
Sbjct: 10  LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRL 69

Query: 106 -------TSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYG 158
                  +S      T  + +++L L+ AY+  GH  A LDPLGL +++   DLDP+ + 
Sbjct: 70  AKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHD 129

Query: 159 FTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDQCNW 218
            TEAD    F +G +      +  +    L  +L  L+Q YCG IG EYMHI   ++  W
Sbjct: 130 LTEADFQETFNVGSF------ASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRW 183

Query: 219 LRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEM 278
           ++ +IE+     +N + ++  L  L  +   E +L  K+  AKRF LEGG+ LIP +KEM
Sbjct: 184 IQQRIESGRA-TFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEM 242

Query: 279 FDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVK 338
              A + G   +V+GM HRGRLNVL NV+ K  + +F EF+G  K         GTGDVK
Sbjct: 243 IRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHL------GTGDVK 296

Query: 339 YHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIH 398
           YH+G S D  T  G  +HL+L  NPSHLE V PVV+G  RA+     +    K + + IH
Sbjct: 297 YHMGFSSDFQT-DGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIH 355

Query: 399 GDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTT-DPRAGRSSQYCTD----- 452
           GD +  GQGVV ETL++S    Y  GGT+ IV+NNQV FTT +P   RS+ YCTD     
Sbjct: 356 GDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMV 415

Query: 453 -------------AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQ 499
                        AV  V  LA ++R  F  DV +DLVCYRR GHNE DEPS TQP MYQ
Sbjct: 416 QAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQ 475

Query: 500 VIRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYW 559
            I+ HP+  +IY  KL +    T ED   +       L+       ++ P      +  W
Sbjct: 476 KIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFT--W 533

Query: 560 AGFKSPEQVSRIRNTGVKPEILKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGID 619
           + + + E         V+ + L+ + K I+ +PE  +    V K+Y  R  M    +  D
Sbjct: 534 SPYLNHEWDEEY-PNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFD 592

Query: 620 WAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEKYCPLDHVMMNQDEE 679
           W   E LA+ATL+ EG  VRLSG+D  RGTF HRH+V+H+Q  G  Y PL H+   Q   
Sbjct: 593 WGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGA- 651

Query: 680 MFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLR 739
            F V +S LSE  VL FE GY+   P +L +WEAQFGDFANGAQV+ DQF+SSGE KW R
Sbjct: 652 -FRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR 710

Query: 740 QTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVT 799
             GLV+LLPHGY+GQGPEHSSARLER+LQ+  +                   N Q+   +
Sbjct: 711 MCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQ------------------NMQVCVPS 752

Query: 800 TPANYFHVLRRQIHRGFRKPLIVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKR 859
           TPA  +H+LRRQ  RG R+PL+V+SPK+LLRH    S+L E  +             F  
Sbjct: 753 TPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAN-----------GTFLP 801

Query: 860 LIKDQNGHSDLEEGIRRLVLCSGKVF 885
            I + +      +G++R+V+CSGKV+
Sbjct: 802 AIGEIDELDP--KGVKRVVMCSGKVY 825
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113 Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Length = 868 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Length = 365 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query936
2jgd_A933 2-oxoglutarate dehydrogenase E1 component; flavopr 100.0
2xt6_A1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 100.0
2yic_A868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 100.0
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 100.0
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 100.0
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 100.0
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 100.0
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 100.0
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 100.0
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 99.96
2o1x_A629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 99.96
1gpu_A680 Transketolase; transferase(ketone residues); HET: 99.95
2ozl_B341 PDHE1-B, pyruvate dehydrogenase E1 component subun 99.95
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 99.94
2bfd_B342 2-oxoisovalerate dehydrogenase beta subunit; oxido 99.94
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 99.94
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 99.94
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 99.94
1r9j_A673 Transketolase; domains, EACH of the alpha/beta typ 99.94
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 99.93
1umd_B324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 99.93
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 99.93
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 99.93
3l84_A632 Transketolase; TKT, structural genomics, center fo 99.92
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 99.92
1w85_B324 Pyruvate dehydrogenase E1 component, beta subunit; 99.92
3uk1_A711 Transketolase; structural genomics, seattle struct 99.91
2qtc_A886 Pyruvate dehydrogenase E1 component; thiamin dipho 99.81
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 99.1
1yd7_A395 2-keto acid:ferredoxin oxidoreductase subunit alph 98.4
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 97.99
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 97.84
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 97.76
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 97.76
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 97.74
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 97.57
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 97.48
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 97.4
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 97.37
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 97.31
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 97.28
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 97.27
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 97.23
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 97.2
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 97.16
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 97.12
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 97.02
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 96.99
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 96.95
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 96.92
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 96.91
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 96.86
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 96.34
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
Probab=100.00  E-value=6.8e-177  Score=1607.41  Aligned_cols=782  Identities=44%  Similarity=0.747  Sum_probs=642.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhCCCCCCHHHHHHHhhccC-----CCCCCC----------CC--------ChhhHHHHH
Q 002323           63 TDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVG-----QAATSP----------GI--------SGQTIQESM  119 (936)
Q Consensus        63 ~~s~l~g~Na~YIEelY~~y~~DP~SVd~sWr~~F~~l~~-----~~~~~~----------~~--------~~~~~~~~~  119 (936)
                      +++||+|.|+.|||+||++|++||+||+++|+.||+++..     .....+          ..        ......+++
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~~p~sv~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (933)
T 2jgd_A           11 DSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQV   90 (933)
T ss_dssp             -------------------------------------------------------------------------CHHHHHH
T ss_pred             hhcccccccHHHHHHHHHHHhhCccccCHHHHHHHhcccccCCcccccccchhhhhhhccccccccccccCcchhHHHHH
Confidence            4589999999999999999999999999999999998731     100000          00        112345788


Q ss_pred             HHHHHHHHHhhcCccccccCCCCCCCCCCCCCCCccccCCCcccccceeecCcccccccccCCCCCcCHHHHHHHHHHHh
Q 002323          120 RLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFIGVWRMAGFLSENRPVQTLRSILTRLEQAY  199 (936)
Q Consensus       120 ~v~~lI~ayr~~GH~~A~lDPL~~~~~~~~~~L~~~~~gl~~~dl~~~~~~~~~~~~~~~~~~~~~~tl~ei~~~L~~~Y  199 (936)
                      +|++||+|||.+||+.|+||||++..+..+++|++.+|||+++|||++|.+|.     +.. +.+.+||+||+++|+++|
T Consensus        91 ~~~~li~~yr~~gh~~a~~dpl~~~~~~~~~~l~~~~~g~~~~d~~~~~~~~~-----~~~-~~~~~~l~~~~~~l~~~y  164 (933)
T 2jgd_A           91 KVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGS-----FAS-GKETMKLGELLEALKQTY  164 (933)
T ss_dssp             HHHHHHHHHHHHGGGGSCCCSSSCCCCC---CCSSGGGGCCC-CTTSEEECTT-----CC----CEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccccccCCCCCCCCCCCCCCCHhHcCCchhhccceeccCc-----ccc-CcCcCcHHHHHHHHHHhc
Confidence            99999999999999999999999865667889999999999999999999872     221 456799999999999999


Q ss_pred             cCCccccccccCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchhhhhHHHHH
Q 002323          200 CGSIGYEYMHIADRDQCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMF  279 (936)
Q Consensus       200 Cg~ig~E~~hi~~~e~r~Wl~~~iE~~~~~~ls~e~~~~il~~M~~ar~fE~fl~~k~~~~KrfgleG~Eali~gl~~li  279 (936)
                      ||+||+|||||.|+++|+||+++||+. .+.+++|+++++|++|+++|.||+|+.++|+++||||++|+|+++||+.+++
T Consensus       165 c~~ig~e~~~i~~~~~~~w~~~~~e~~-~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~~~G~Ea~i~g~~~~~  243 (933)
T 2jgd_A          165 CGPIGAEYMHITSTEEKRWIQQRIESG-RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMI  243 (933)
T ss_dssp             HSSEEEECSSCCCHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCTTCTTHHHHHHHHH
T ss_pred             cCCCcceeeecCCHHHhHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCchHHHHHHHHHH
Confidence            999999999999999999999999976 5689999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCcEEecCCCCchHHHHHhhcCCCHHHHHHhhcCCCCCCCCCCCccCCCCcccccccccCCCCCCCceeeeee
Q 002323          280 DRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSL  359 (936)
Q Consensus       280 ~~A~~~Gv~DivigM~HRgrlnvLa~vlg~p~~~ifaEf~G~~~~~~~G~~~ggsGDVkyHlG~s~~~~~~~g~~I~lsl  359 (936)
                      ++|+++|++|+|+||+||||+|+|+|++|+|+.+||+||+|+.++.+      |+||||||+|++....+. |..+||++
T Consensus       244 ~~a~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~------g~gdv~~Hlg~~~~~~~~-gg~~~l~l  316 (933)
T 2jgd_A          244 RHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHL------GTGDVKYHMGFSSDFQTD-GGLVHLAL  316 (933)
T ss_dssp             HHHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CC------SCCCCGGGCCEEEEEEET-TEEEEEEE
T ss_pred             HHHhhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCC------CCCCccccCCcccccccC-CCceEEee
Confidence            99999999999999999999999999999999999999999986653      468999999988765444 55799999


Q ss_pred             ccccCCCccccceeechhHHHHHhcCCCCCCceEEEEEecCcccCCCchHHHhhhccCCCCCccccEEEEEEeCCccccc
Q 002323          360 VANPSHLEAVDPVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTT  439 (936)
Q Consensus       360 ~~NPSHLeav~PVa~G~ArA~q~~~~d~~~~~~v~v~~hGDgA~sGQGvv~EtLNlA~LP~Y~~GGtIhIV~NNQigfTT  439 (936)
                      ++||||||+++|+|+|+|+|+|+++.+.++.+.++||+|||||+++||+|||+||+|.+.+|.|||+||||+||||||||
T Consensus       317 ~~~~shlg~~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist  396 (933)
T 2jgd_A          317 AFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTT  396 (933)
T ss_dssp             CCCCSSTTCHHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC-----
T ss_pred             cccCcccccccCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccC
Confidence            99999999999999999999999865444567999999999999559999999999999999999999999999999999


Q ss_pred             -CCCCCCCcchhhH------------------HHHHHHHHHHHHHHccCCCEEEEEEeeecCCCCCCCCCCCCCHHHHHH
Q 002323          440 -DPRAGRSSQYCTD------------------AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQV  500 (936)
Q Consensus       440 -~~~~~rss~y~tD------------------AV~~a~~~A~e~rr~f~~pvlIdlv~YRr~GHne~Ddp~ytqp~~y~~  500 (936)
                       ++.+++++.|++|                  ||++|++.|++++|++++|+|||++|||++|||++|+|+||+|+||+.
T Consensus       397 ~~~~~~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~yr~~~e~~~  476 (933)
T 2jgd_A          397 SNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQK  476 (933)
T ss_dssp             ----------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-----------CCTTHHH
T ss_pred             CCHHhcccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchhhCCHHHHHH
Confidence             9998888888875                  899999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccchhhhhccCCCCcccccccCCCCCChHH
Q 002323          501 IRSHPSAFEIYQKKLLESAQVTQEDINRIQEKVNTILNEEFMASKDYVPKRRDWLSAYWAGFKSPEQVSRIRNTGVKPEI  580 (936)
Q Consensus       501 i~~~~dpl~~y~~~Li~eGilt~eei~~i~~~~~~~l~~a~~~A~~~~p~~~~~~~~~w~~~~~~~~~~~~~~Tgv~~~~  580 (936)
                      |++++||+.+|+++|+++|++|++++++++++++++|+++++.|++..|.+.++  ..|.++... .....++||++.+.
T Consensus       477 ~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~~~p~~~~~--~~~~~~~~~-~~~~~~~tg~~~~~  553 (933)
T 2jgd_A          477 IKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHS--FTWSPYLNH-EWDEEYPNKVEMKR  553 (933)
T ss_dssp             HHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTTEECCCGGG--CTTGGGSSC-CTTCCCCCCCCHHH
T ss_pred             HHccCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcch--hhccccccc-ccccCCCCCCCHHH
Confidence            998899999999999999999999999999999999999999998754443332  457654321 11224679999999


Q ss_pred             HHHHHHHhccCCCCCCchhHHHHHHHHHHHHHhcCCcccHHHHHHHHhhhhhhcCCcEEEecccCCCcccccccceeeec
Q 002323          581 LKNVGKAITNLPENFKPHRGVKKVYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQ  660 (936)
Q Consensus       581 l~~i~~~~~~~P~~f~~h~~l~r~l~~R~~~~~~~~~iDWa~aE~LAfgsLl~eg~~Vrl~GqDv~rGtF~~RHavl~dq  660 (936)
                      |+.++++++++|++|++|++|+|++++|.+|+++++.+||+++|++||++|+.+|.+||++||||+||||+|||||||||
T Consensus       554 l~~i~~~~~~~p~~~~~~~~v~~~~~~R~~~~~~~~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d~  633 (933)
T 2jgd_A          554 LQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQ  633 (933)
T ss_dssp             HHHHHHHTTCCCTTSCCCHHHHHHHHHHHHHHTTSSCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEECS
T ss_pred             HHHHHhhhcCCCCCCcccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhcccc
Confidence            99999999999999999999999999999999999899999999999999999999999999999999999999999999


Q ss_pred             CCCceeecCCCCcccCCCcceEEEccCcchhHHHHHHhhhccCCCCcceeeeccchhhhhhHHHHHHHHHhhhhhhhcCc
Q 002323          661 ETGEKYCPLDHVMMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQ  740 (936)
Q Consensus       661 ~t~~~y~pL~~l~~~~~~g~~rV~nspLSE~avlG~e~G~sl~g~~~LviwEaqFgDF~n~Aq~iidqfi~~~~~kw~~~  740 (936)
                      +||..|+||++|.  ++||++||+||||||++++||++|||+.|+++|+|||+|||||+|+||+++|||++++++||+++
T Consensus       634 ~~g~~~~~l~~l~--~~~gp~rv~ds~IaE~~~vg~a~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~~~~  711 (933)
T 2jgd_A          634 SNGSTYTPLQHIH--NGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRM  711 (933)
T ss_dssp             SSSCEECGGGCSC--TTCCCEEEECCCSCHHHHHHHHHHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHHCCC
T ss_pred             cCCceeechHHHH--HHcCCCeEEECCcCHHHHHHHHHHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHHccC
Confidence            9999999999999  89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccEEEcCccCCCCCccccCchhhhhhhcCCCCCCcccCCCchhhhhccccceEEEEcCCHHHHHHHHHHHHhcCCCCcE
Q 002323          741 TGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPL  820 (936)
Q Consensus       741 s~lv~~lPhG~~G~GpeHSs~RiERfLQl~~~~~~~~~~~pg~~~~~~~~~N~~Vv~pstpa~~fhlLrrq~~r~~~~Pl  820 (936)
                      +||||++||||+|+||+|||+|+|||||||+.        |          ||+|++||||+|||||||+|+.+++++||
T Consensus       712 ~~vv~~l~~G~~g~G~~Hss~~~E~~l~~~~~--------p----------nm~V~~Pst~~e~~~lLr~a~~~~~~~Pv  773 (933)
T 2jgd_A          712 CGLVMLLPHGYEGQGPEHSSARLERYLQLCAE--------Q----------NMQVCVPSTPAQVYHMLRRQALRGMRRPL  773 (933)
T ss_dssp             CCCEEEEECCCSSSCTTSSCCCHHHHHHTCCT--------T----------CCEEECCCSHHHHHHHHHHHHHSSCCCCE
T ss_pred             CCEEEEEeCCCCCCCcccccchHHHHHHHhCC--------C----------CeEEEecCCHHHHHHHHHHHHHhcCCCcE
Confidence            99999999999999999999999999999986        2          79999999999999999999877779999


Q ss_pred             EEEccccccCCCCCCCCcccccccCCCCCCCCCCCceeEeecCCCCCCCCCCCccEEEEeCchhHHHHHHhhcc
Q 002323          821 IVISPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVFITSLMKGGR  894 (936)
Q Consensus       821 i~~~pK~Llr~~~~~S~l~ef~~~~~~~~~~~pg~~F~~vi~d~~~~~~~~~~v~rvilcsGkvyydL~~~r~~  894 (936)
                      ||++||+|||++.++|+++||.+           +.|+.+|++...  ...++|+|||+|+|++||+|.++|++
T Consensus       774 ii~~pk~l~r~~~~~~~~~~~~~-----------~~f~~~ig~~~~--~~g~dV~~vI~~~G~v~~~l~aa~~~  834 (933)
T 2jgd_A          774 VVMSPKSLLRHPLAVSSLEELAN-----------GTFLPAIGEIDE--LDPKGVKRVVMCSGKVYYDLLEQRRK  834 (933)
T ss_dssp             EEEECSGGGGCTTCCBCHHHHHH-----------CCCCSEECCCSC--CCGGGCCEEEEECTTHHHHHHHHHHH
T ss_pred             EEEecchhccCCCCcCCccccCC-----------CceeecCCcceE--eecCcceEEEEEchHHHHHHHHHHHH
Confidence            99999999999999998999976           779999988753  23678999999999999999998754
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 936
d1umda_362 c.36.1.11 (A:) Branched-chain alpha-keto acid dehy 3e-10
d2bfda1395 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid 3e-05
d1qs0a_407 c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B 2e-04
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Length = 362 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

 Score = 61.1 bits (147), Expect = 3e-10
 Identities = 32/203 (15%), Positives = 63/203 (31%), Gaps = 21/203 (10%)

Query: 371 PVVVGKTRAKQYYSHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIV 430
           P+      A                +         +G  Y  ++ +A+        + I 
Sbjct: 140 PIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPA---VFIA 196

Query: 431 VNNQVAFTTDPRAGRSSQYCTD------------------AVVHVCELAAEWRQKFHSDV 472
            NN  A + D R    S    D                  A  +V + A E  ++     
Sbjct: 197 ENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPS 256

Query: 473 VVDLVCYRRFGHNEIDEPSFTQPKMYQVIRSHPSAFEIYQKKLLESAQVTQEDINRIQEK 532
           +V+L  YR   H+  D+ S  +PK              +++ L       +E    ++E+
Sbjct: 257 LVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREE 316

Query: 533 VNTILNEEFMASKDYVPKRRDWL 555
           +   L      +++  P   +W+
Sbjct: 317 IRAELERGLKEAEEAGPVPPEWM 339
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Length = 395 Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Length = 407 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query936
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 100.0
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 100.0
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 100.0
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 100.0
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 100.0
d1w85b1192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d 100.0
d2bfdb1203 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.97
d2ozlb1192 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.97
d1ik6a1191 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.96
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 99.96
d1umdb1186 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.9
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 97.99
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 97.95
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 97.87
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 97.71
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 97.37
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 97.28
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 97.24
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 97.18
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 96.97
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 96.95
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 96.68
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 96.57
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 96.57
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 96.56
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 96.48
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 96.44
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 96.18
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 96.09
d2ieaa2415 Pyruvate dehydrogenase E1 component, PP module {Es 95.7
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 94.73
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 88.74
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-57  Score=504.41  Aligned_cols=295  Identities=16%  Similarity=0.178  Sum_probs=269.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---ccCCcchhhhhHHHHHHHHhhCCC-CcEEecCCCCchHHHH
Q 002323          228 PMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRF---GLEGGETLIPGMKEMFDRAADLGV-ESIVIGMPHRGRLNVL  303 (936)
Q Consensus       228 ~~~ls~e~~~~il~~M~~ar~fE~fl~~k~~~~Krf---gleG~Eali~gl~~li~~A~~~Gv-~DivigM~HRgrlnvL  303 (936)
                      .++||+|+++++|+.|+++|.||+++..+|+++|.+   ++.|+|++.+|+.+.+      .. .|++++ +||+|+++|
T Consensus        25 ~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al------~~~~D~~~~-~yR~h~~~l   97 (362)
T d1umda_          25 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAI------RPGFDWVFP-YYRDHGLAL   97 (362)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHS------CTTTSEEEC-CTTTHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcceeeCCCCHHHHHHHHHHHc------CCCCCeEEe-ccccHHHHH
Confidence            478999999999999999999999999999999864   4799999999876655      34 499999 899999999


Q ss_pred             HhhcCCCHHHHHHhhcCCCCCCCCCCCccCCCCcccccccccCCCCCCCceeeeeeccccCCCccccceeechhHHHHHh
Q 002323          304 GNVVRKPLRQIFSEFSGGTKPVDEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYY  383 (936)
Q Consensus       304 a~vlg~p~~~ifaEf~G~~~~~~~G~~~ggsGDVkyHlG~s~~~~~~~g~~I~lsl~~NPSHLeav~PVa~G~ArA~q~~  383 (936)
                      ++  |.|+.++|+|++|+.+++++|+  +|+    +|++ +.+.++          ++..++||++.|+|+|.|+|.|++
T Consensus        98 a~--G~~~~~~~ae~~gk~~g~~~Gr--ggs----~H~~-~~~~~~----------~~~~~ivg~~~p~a~G~A~a~k~~  158 (362)
T d1umda_          98 AL--GIPLKELLGQMLATKADPNKGR--QMP----EHPG-SKALNF----------FTVASPIASHVPPAAGAAISMKLL  158 (362)
T ss_dssp             HH--TCCHHHHHHHHHTBTTCTTTTC--SCS----SCCC-BTTTTB----------CCCCSSTTTTHHHHHHHHHHHHHT
T ss_pred             HH--HhhHHHHHHHHhcccCCCcccc--ccc----cccc-ccccCc----------ccccccccccchHHHHHHHhhhcc
Confidence            99  9999999999999999999887  677    8995 445444          445566999999999999999999


Q ss_pred             cCCCCCCceEEEEEecCcccCCCchHHHhhhcc---CCCCCccccEEEEEEeCCcccccCCCCCCCcchhhH--------
Q 002323          384 SHDVDRTKNMGVLIHGDGSFAGQGVVYETLHLS---ALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTD--------  452 (936)
Q Consensus       384 ~~d~~~~~~v~v~~hGDgA~sGQGvv~EtLNlA---~LP~Y~~GGtIhIV~NNQigfTT~~~~~rss~y~tD--------  452 (936)
                      +++     .|+||++||||++ ||+||||||||   +||      +||||+||+||+||+.+++++..+.++        
T Consensus       159 ~~~-----~v~v~~~GDGa~~-eG~f~Ealn~A~~~~lP------vifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~  226 (362)
T d1umda_         159 RTG-----QVAVCTFGDGATS-EGDWYAGINFAAVQGAP------AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIP  226 (362)
T ss_dssp             TCC-----CCEEEEEETGGGG-SHHHHHHHHHHHHTTCS------EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSC
T ss_pred             ccc-----ceeeeeccCCccc-CCchHHHHHHhhhccCC------eeeeeeecccccccccccccccchhhhhhhhheee
Confidence            876     9999999999998 99999999999   999      999999999999999887776654432        


Q ss_pred             ----------HHHHHHHHHHHHHHccCCCEEEEEEeeecCCCCCCCCCC-CCCHHHHHHHHcCCCHHHHHHHHHHHcCCC
Q 002323          453 ----------AVVHVCELAAEWRQKFHSDVVVDLVCYRRFGHNEIDEPS-FTQPKMYQVIRSHPSAFEIYQKKLLESAQV  521 (936)
Q Consensus       453 ----------AV~~a~~~A~e~rr~f~~pvlIdlv~YRr~GHne~Ddp~-ytqp~~y~~i~~~~dpl~~y~~~Li~eGil  521 (936)
                                +|+.+++.|++++|++++|+|||+.|||+.||+++|++. ||++++++.|+ .+||+.+|+++|+++|++
T Consensus       227 ~~~vDGnDv~~v~~a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~-~~DPi~~~~~~L~~~g~~  305 (362)
T d1umda_         227 GYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLW  305 (362)
T ss_dssp             EEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCC
T ss_pred             eeEeccchHHHHHHHHHHHHHHHHhcCCCEEEEcccccccCCCccccchhhcchhhhHHHh-cCCHHHHHHHHHHHCCCC
Confidence                      999999999999999999999999999999999999886 99999999999 489999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhcC-CCccchhhhhccC
Q 002323          522 TQEDINRIQEKVNTILNEEFMASKDYV-PKRRDWLSAYWAG  561 (936)
Q Consensus       522 t~eei~~i~~~~~~~l~~a~~~A~~~~-p~~~~~~~~~w~~  561 (936)
                      |++++++|+++++++|++++++|++.| |++.++++++|++
T Consensus       306 se~e~~~i~~ei~~~V~~a~~~A~~~p~P~~~~l~~~VY~~  346 (362)
T d1umda_         306 NEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAE  346 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTSSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhcccCC
Confidence            999999999999999999999999987 8888889999876
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure