Citrus Sinensis ID: 002354
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 932 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SZC9 | 949 | Copper-transporting ATPas | yes | no | 0.966 | 0.949 | 0.672 | 0.0 | |
| B9DFX7 | 883 | Copper-transporting ATPas | no | no | 0.827 | 0.873 | 0.427 | 1e-172 | |
| P37385 | 790 | Probable copper-transport | yes | no | 0.789 | 0.931 | 0.374 | 1e-141 | |
| P07893 | 790 | Probable copper-transport | yes | no | 0.789 | 0.931 | 0.371 | 1e-139 | |
| Q4L970 | 795 | Copper-exporting P-type A | yes | no | 0.766 | 0.898 | 0.356 | 1e-122 | |
| Q4A0G1 | 794 | Copper-exporting P-type A | yes | no | 0.751 | 0.881 | 0.347 | 1e-122 | |
| P37279 | 747 | Cation-transporting ATPas | no | no | 0.777 | 0.970 | 0.353 | 1e-121 | |
| Q8CN02 | 794 | Copper-exporting P-type A | yes | no | 0.765 | 0.897 | 0.345 | 1e-120 | |
| Q5HL56 | 794 | Copper-exporting P-type A | yes | no | 0.765 | 0.897 | 0.345 | 1e-120 | |
| Q8NUQ9 | 802 | Copper-exporting P-type A | yes | no | 0.760 | 0.884 | 0.350 | 1e-119 |
| >sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/933 (67%), Positives = 743/933 (79%), Gaps = 32/933 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 587
LVVACPCALGLATPTAMLVGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT G PV
Sbjct: 550 LVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPV 609
Query: 588 VTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFSNC 643
VT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA NC
Sbjct: 610 VTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNC 660
Query: 644 QNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVY 703
Q +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY
Sbjct: 661 QTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVY 720
Query: 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763
+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V
Sbjct: 721 IGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERV 780
Query: 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVL 823
++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV+ VVL
Sbjct: 781 IAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVL 840
Query: 824 MGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGAL 883
MGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGAL
Sbjct: 841 MGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGAL 900
Query: 884 MGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 916
MG+SS+GVM NSLLLR +F S + P +
Sbjct: 901 MGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Plays also a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: nEC: 1 |
| >sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust.
Identities = 359/839 (42%), Positives = 514/839 (61%), Gaps = 68/839 (8%)
Query: 118 EELSALSSDV-IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKV 176
E + +++SD I+LDV GM CGGC A VK +L S +V+SA VN+ TETA V + +V
Sbjct: 67 ESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEV 126
Query: 177 IPNWQRQLGEALAKHLTSCGFKSSLR--DMGTDNFFKVFETKMHEKRNRLKESGRGLAVS 234
+ E+LAK LT GF++ R MG K ++ + +K + L +S +A +
Sbjct: 127 TAD----TAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKKEDLLVKSRNRVAFA 182
Query: 235 WALCAVCLVGHLSHILGAKASWIHVFHSTGFHL--------SLSLFTLLGPGFQLILDGV 286
W L A+C H SHIL + IH+ H + L L++ LLGPG +L+ DG+
Sbjct: 183 WTLVALCCGSHTSHILHSLG--IHIAHGGIWDLLHNSYVKGGLAVGALLGPGRELLFDGI 240
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKA-FFEEPIMLIAFVLLGKNLEQR 345
K+ K +PNMN+LVGLG++++F++S ++ + P+L W A FF+EP+ML+ FVLLG++LE+R
Sbjct: 241 KAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFVLLGRSLEER 300
Query: 346 AKIKATSDMTGLLGILPSKARLLV---DND-------AKDSI-IEVPCNSLHVGDHIVVL 394
AK++A++DM LL ++ +++RL++ DN+ + DSI I V + + VGD ++VL
Sbjct: 301 AKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDIRVGDSLLVL 360
Query: 395 PGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGET 454
PG+ P DG V AGRS VDES TGE LPV K V+AG+IN +G L ++ G +
Sbjct: 361 PGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRIKASSTGSNS 420
Query: 455 AMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI--Q 512
+ IVR+VE+AQ APVQRLAD ++G F Y +++LSA TF FW G+H+ P +
Sbjct: 421 TISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSHIFPDVLLND 480
Query: 513 YGGP----VSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFA 568
GP ++L+L+L+ VLVV+CPCALGLATPTA+L+GTSLGA RG L+RGG++LE+ A
Sbjct: 481 IAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLA 540
Query: 569 MVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVH 628
++ V DKTGTLT GRPVV+ V + G E E+LK AA VE H
Sbjct: 541 SIDCVALDKTGTLTEGRPVVSGVASLG--------------YEEQEVLKMAAAVEKTATH 586
Query: 629 PIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTF 688
PI KAIV AE N + + + EPG GT+A I+ R V+VG+++W+ + +
Sbjct: 587 PIAKAIVNEAESLNLKTPETRGQ--LTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDS 644
Query: 689 QE-VEMEDLMNQSL-------------VYVGVDNM-LAGLIYVEDRIRDDAAHVVNSLSS 733
+ V++E L++ L VYVG + + G I + D +R DA V L
Sbjct: 645 SDMVKLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQE 704
Query: 734 QGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGI 793
+GI +LSGD++ + VA VGI + + P +K FI+ LQ+ + VAMVGDGI
Sbjct: 705 KGIKTVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGI 764
Query: 794 NDAAALASSHIGVAMG--GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWW 851
NDA +LA + +G+A+ AAS ASV+L+ N+LS ++ AL L++ TM V QNL W
Sbjct: 765 NDAPSLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAW 824
Query: 852 AFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASF 910
A YN++ IPIAAGVLLP +TPS++G LM LSSI V++NSLLL+L S K S
Sbjct: 825 AIAYNVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKNSL 883
|
Mediates copper transfer across the chloroplast thylakoid membrane. Required for copper delivery into the thylakoids lumen, which is essential for the function of copper proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P37385|ATSY_SYNE7 Probable copper-transporting ATPase SynA OS=Synechococcus elongatus (strain PCC 7942) GN=synA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 304/812 (37%), Positives = 454/812 (55%), Gaps = 76/812 (9%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
SS I+++V GM C GC A+V+R L+ V + SVNL T A V A +I +
Sbjct: 12 SSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKV--DYDAALIED---- 65
Query: 184 LGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLV 243
L +T GF++ LR + E +++ RL+ LA++ L V
Sbjct: 66 -PTVLTTEITGLGFRAQLRQDDNPLTLPIAEIPPLQQQ-RLQ-----LAIAAFLLIVSSW 118
Query: 244 GHLSHIL-----GAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNT 298
GHL H L G W FH L+ + LLGPG ++ G + L GAPNMN+
Sbjct: 119 GHLGHWLDHPLPGTDQLW--------FHALLATWALLGPGRSILQAGWQGLRCGAPNMNS 170
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
LV LG S++ S +A L P+LGW FF+EP+ML+ F+LLG+ LE++A+ ++ + + LL
Sbjct: 171 LVLLGTGSAYLASLVALLWPQLGWVCFFDEPVMLLGFILLGRTLEEQARFRSQAALQNLL 230
Query: 359 GILPSKARLLV--DNDAKDSIIEVPCN-----SLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ P +LL + A ++E P L GD++ VLPGDRIP DG + AG+ST
Sbjct: 231 ALQPETTQLLTAPSSIAPQDLLEAPAQIWPVAQLRAGDYVQVLPGDRIPVDGCIVAGQST 290
Query: 412 VDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREA 471
+D + TGEPLP V AG++NL+ L + + G +T + IVR V EAQ R+A
Sbjct: 291 LDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKA 350
Query: 472 PVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQY------------------ 513
PVQR AD ++G F YGV A++A TF FW G+ P +Q
Sbjct: 351 PVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAH 410
Query: 514 ---GGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMV 570
P+ LAL L+ SVLVVACPCALGLATPTA+LV T L A +G+L+RGG++LE+ A +
Sbjct: 411 PHSHSPLLLALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDVLEQLARI 470
Query: 571 NTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPI 630
VFDKTGTLT G+ + ++ P+ + +L++AA +E+++ HP+
Sbjct: 471 KHFVFDKTGTLTQGQFELIEI-------------QPLADVDPDRLLQWAAALEADSRHPL 517
Query: 631 GKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE 690
A+ AA+ +N + +D + PG G + R + +G W++ T
Sbjct: 518 ATALQTAAQAANLAPIAASDRQQV--PGLGVSGTCDGRSLRLGNPTWVQVATAKLPTGSA 575
Query: 691 VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 750
+++ D L +++D+ R +AA VV +L S+G V +LSGD++ +A
Sbjct: 576 AATS-------IWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSGDRQTTAV 628
Query: 751 YVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGG 810
+A +G+ + V++ V P +K I LQ+ + VAM+GDGINDA ALA++ +G+++
Sbjct: 629 ALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAAVGISLAA 688
Query: 811 GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPV 870
G A + A ++L +RL +LVA LS++ ++T++QNL WA GYN+V +P+AAG LP
Sbjct: 689 GSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAGAFLPA 748
Query: 871 TGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 902
G LTP+IAGA M +SS+ V++NSLLLR F
Sbjct: 749 YGLALTPAIAGACMAVSSLAVVSNSLLLRYWF 780
|
Involved in copper transport. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P07893|ATSY_SYNP6 Probable copper-transporting ATPase SynA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 302/812 (37%), Positives = 453/812 (55%), Gaps = 76/812 (9%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
SS I+++V GM C GC A+V+R L+ V + SVNL T A V A +I +
Sbjct: 12 SSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKV--DYDAALIED---- 65
Query: 184 LGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLV 243
L +T GF++ LR + E +++ RL+ LA++ L V
Sbjct: 66 -PTVLTTEITGLGFRAQLRQDDNPLTLPIAEIPPLQQQ-RLQ-----LAIAAFLLIVSSW 118
Query: 244 GHLSHIL-----GAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNT 298
GHL H L G W FH L+++ LLGPG ++ G + L GAPNMN+
Sbjct: 119 GHLGHWLDHPLPGTDQLW--------FHALLAIWALLGPGRSILQAGWQGLRCGAPNMNS 170
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
LV LG S++ S +A L P+LGW F +EP+ML+ F+LLG+ LE++A+ ++ + + LL
Sbjct: 171 LVLLGTGSAYLASLVALLWPQLGWVCFLDEPVMLLGFILLGRTLEEQARFRSQAALQNLL 230
Query: 359 GILPSKARLLV--DNDAKDSIIEVPCN-----SLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ P +LL + A ++E P L GD++ VLPG RIP DG + AG+ST
Sbjct: 231 ALQPETTQLLTAPSSIAPQDLLEAPAQIWPVAQLRAGDYVQVLPGVRIPVDGCIVAGQST 290
Query: 412 VDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREA 471
+D + TGEPLP V AG++NL+ L + + G +T + IVR V EAQ R+A
Sbjct: 291 LDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKA 350
Query: 472 PVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQY------------------ 513
PVQR AD ++G F YGV A++A TF FW G+ P +Q
Sbjct: 351 PVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAH 410
Query: 514 ---GGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMV 570
P+ LAL L+ SVLVVACPCALGLATPTA+LV T L A +G+L+RGG++LE+ A +
Sbjct: 411 PHSHSPLLLALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDVLEQLARI 470
Query: 571 NTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPI 630
VFDKTGTLT G+ + ++ P+ + +L++AA +E+++ HP+
Sbjct: 471 KHFVFDKTGTLTQGQFELIEI-------------QPLADVDPDRLLQWAAALEADSRHPL 517
Query: 631 GKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE 690
A+ AA+ +N + +D + PG G + R + +G W++ T
Sbjct: 518 ATALQTAAQAANLAPIAASDRQQV--PGLGVSGTCDGRSLRLGNPTWVQVATAKLPTGSA 575
Query: 691 VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 750
+++ D L +++D+ R +AA VV +L S+G V +LSGD++ +A
Sbjct: 576 AATS-------IWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSGDRQTTAV 628
Query: 751 YVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGG 810
+A +G+ + V++ V P +K I LQ+ + VAM+GDGINDA ALA++ +G+++
Sbjct: 629 ALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAAVGISLAA 688
Query: 811 GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPV 870
G A + A ++L +RL +LVA LS++ ++T++QNL WA GYN+V +P+AAG LP
Sbjct: 689 GSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAGAFLPA 748
Query: 871 TGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 902
G LTP+IAGA M +SS+ V++NSLLLR F
Sbjct: 749 YGLALTPAIAGACMAVSSLAVVSNSLLLRYWF 780
|
Involved in copper transport. Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/796 (35%), Positives = 426/796 (53%), Gaps = 82/796 (10%)
Query: 120 LSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV--WPVSK 173
+ L DV+I LD+ GMTC C+ ++++L P V A+VNLTTE A+V +P
Sbjct: 62 VQKLGYDVVIDKAELDITGMTCAACSNRIEKVLNKAPGVKDATVNLTTEQAMVTYYP--- 118
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFET-KMHEKRNRLKESGRGLA 232
Q L + + +R++G D K E + K+ LK L
Sbjct: 119 ------GQTDLDTLIGR----------IRNLGYDAQPKQSEEDQATRKQQELKHKRNKLM 162
Query: 233 VSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKG 292
+S L L+ L H+ + + F L+ G+Q + K+L G
Sbjct: 163 ISTILSLPLLMTMLVHLFNMHLP--DILMNPWFQFILATPIQFIIGWQFYVGAYKNLRNG 220
Query: 293 APNMNTLVGLGAVSSFTVS--------SLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQ 344
NM+ LV LG +++ S S A +P L +FE +LI +L GK LE
Sbjct: 221 GFNMDVLVALGTSAAYFYSIYEMIKWFSGATNMPHL----YFETSAVLITLILFGKYLEA 276
Query: 345 RAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404
RAK + T+ ++ LL + +ARL+ DN + VP N ++V D +++ PG++IP DG
Sbjct: 277 RAKSQTTNALSELLNLQAKEARLIDDNGMEKM---VPLNQVNVDDILLIKPGEKIPVDGQ 333
Query: 405 VRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVE 464
+ G + +DES TGE +PV K + V ++N NG +T+ + G +TA+ +I+++VE
Sbjct: 334 IIKGETAIDESMLTGESMPVDKHVDDVVIGSTMNTNGVITIMATKVGKDTALSNIIKVVE 393
Query: 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524
EAQS +AP+QRLAD +SG+F VIA++ TF+ W + + G AL +
Sbjct: 394 EAQSSKAPIQRLADIISGYFVPIVIAIALLTFLIW---------ITLVHPGQFEDALVAA 444
Query: 525 CSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIG 584
SVLV+ACPCALGLATPT+++VGT A G+L +GG +E+ V+TVVFDKTGTLT G
Sbjct: 445 ISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEYVERTHQVDTVVFDKTGTLTHG 504
Query: 585 RPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQ 644
+P VT + + + L A E+N+ HP+ AIV A+
Sbjct: 505 KPEVT------------------YFEGDKDTLTLVASAENNSEHPLATAIVNYAKQHKVN 546
Query: 645 NVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTF-QEVEMEDLMNQSLVY 703
V V + + PG G AII+D + VG + H ++ + Q+++ + +++
Sbjct: 547 LVNVTN--YQTLPGHGIQAIIDDSMLFVGNQKLMLDHQINIQSIKQKMKQMEAEGHTVML 604
Query: 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763
+ D L G+I V D ++ A + LSS I ML+GD + +A+ +A VGI D+V
Sbjct: 605 IAYDGKLRGMIAVADTVKASAKEAIQQLSSMNIRTVMLTGDNERTAKAIAKEVGI--DQV 662
Query: 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVL 823
++GV P +K I +LQ ++ VAMVGDGINDA AL + IG+AMG G A E A + +
Sbjct: 663 IAGVLPEDKAHHITQLQEQKHNVAMVGDGINDAPALVKADIGIAMGTGTEVAIEAADITI 722
Query: 824 MGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGAL 883
+G + + A+ S T++ +KQNL+WAFGYNI GIPIAA L L P IAGA
Sbjct: 723 LGGDIQLVPKAIHASHKTIRNIKQNLFWAFGYNIAGIPIAAMGL-------LAPWIAGAA 775
Query: 884 MGLSSIGVMANSLLLR 899
M LSS+ V++N+L L+
Sbjct: 776 MALSSVSVVSNALRLK 791
|
Involved in copper export. Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 273/785 (34%), Positives = 420/785 (53%), Gaps = 85/785 (10%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
LDV GMTC C+ ++++L V A+VNLTTE A + A + +AL
Sbjct: 76 LDVIGMTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATSV--------DALI 127
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
K + G+ + + K K +K L+ L +S L A L+ L H+
Sbjct: 128 KKIQKIGYDAQPK--------KEVAEKSSQKELELRSKLVKLIISAVLAAPLLLTMLVHL 179
Query: 250 LGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFT 309
G + +F + F L+ G+Q + K+L G+ NM+ LV LG +++
Sbjct: 180 FGIQIP--SIFMNPWFQFILATPVQFIIGWQFYVGAYKNLRNGSANMDVLVALGTSAAYF 237
Query: 310 VSSL--------AALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
S A ++P L +FE +LI +L GK LE RAK + T+ ++ LL +
Sbjct: 238 YSLYEMVKWLFNANVMPHL----YFETSAVLITLILFGKYLETRAKTQTTNALSELLNLQ 293
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
+AR+L DN K+ +I P N + GD++++ PG++IP DG + G++++DES TGE
Sbjct: 294 AKEARVLRDN--KEQMI--PLNDVVEGDYLIIKPGEKIPVDGKIIKGKTSIDESMLTGES 349
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PV K+ + V ++N NG++TV+ + G +TA+ I+++VEEAQ +AP+QRLAD +S
Sbjct: 350 MPVEKVQDDNVIGSTMNKNGSITVKATKVGKDTALASIIKVVEEAQGSKAPIQRLADVIS 409
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATP 541
G+F V+ ++ TF+ W F G AL + +VLV+ACPCALGLATP
Sbjct: 410 GYFVPIVVGIAVLTFIIWIAFVQQ---------GQFEPALVAAIAVLVIACPCALGLATP 460
Query: 542 TAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN 601
T+++VGT A G+L +GG +E+ ++TVV DKTGT+T G+PVVT
Sbjct: 461 TSIMVGTGKAAENGILFKGGEHIERTHQIDTVVLDKTGTITNGKPVVTDFD--------- 511
Query: 602 SKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEE-PGSG 660
+ E L+ A E + HP+ AIV ++ N+K+ D T E PG G
Sbjct: 512 ---------GDEEALQLLASAEKGSEHPLADAIV---NYAQTMNIKLLDTTDFEAVPGRG 559
Query: 661 TVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ------SLVYVGVDNMLAGLI 714
A I + + VG ++ VD + ED+M Q + + + ++ G++
Sbjct: 560 IKANISGKNLIVGNRQFMNDENVDIK-----DSEDIMTQFEKSGKTAMLIAINQEYRGMV 614
Query: 715 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKR 774
V D ++D A + L I V ML+GD + +A+ +A+ VGI D +++ V P EK
Sbjct: 615 AVADTVKDSTATAIKQLHDLNIKVVMLTGDNERTAQAIANEVGI--DTIIAQVLPEEKAA 672
Query: 775 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834
I LQ + +AMVGDG+NDA AL + IG+A+G G A E A V ++G L + A
Sbjct: 673 KIKSLQTQDKTIAMVGDGVNDAPALVQADIGIAIGTGTEVAIEAADVTILGGDLLLIPKA 732
Query: 835 LELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMAN 894
++ S+ T++ ++QNL+WAFGYN+ GIPIAA L L P IAGA M LSS+ V+ N
Sbjct: 733 IKASKATIRNIRQNLFWAFGYNVAGIPIAALGL-------LAPWIAGAAMALSSVSVVTN 785
Query: 895 SLLLR 899
+L L+
Sbjct: 786 ALRLK 790
|
Involved in copper export. Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|P37279|ATCS_SYNE7 Cation-transporting ATPase PacS OS=Synechococcus elongatus (strain PCC 7942) GN=pacS PE=3 SV=2 | Back alignment and function description |
|---|
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 276/781 (35%), Positives = 433/781 (55%), Gaps = 56/781 (7%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA-IVWPVSKAKVIPNWQRQLGEAL 188
L + GM C CA ++ ++++ P V SVN E A + + + +V A+
Sbjct: 7 LTLRGMGCAACAGRIEALIQALPGVQECSVNFGAEQAQVCYDPALTQV---------AAI 57
Query: 189 AKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSH 248
+ + G+ + DN +V + H + ++ + + VS + ++ ++G L
Sbjct: 58 QAAIEAAGYHAFPLQDPWDN--EVEAQERHRRARSQRQLAQRVWVSGLIASLLVIGSLPM 115
Query: 249 ILGAKASWIHVF-HSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSS 307
+LG I ++ H G L L+L +L G ++ K+ + M+TLV +G ++
Sbjct: 116 MLGISIPGIPMWLHHPGLQLGLTL-PVLWAGRSFFINAWKAFRQNTATMDTLVAVGTGAA 174
Query: 308 FTVSSLAALVPKLGW--------KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLG 359
F S L P+ W ++E ++IA +LLG++LE+RAK + ++ + L+G
Sbjct: 175 FLYSLAVTLFPQ--WLTRQGLPPDVYYEAIAVIIALLLLGRSLEERAKGQTSAAIRQLIG 232
Query: 360 ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTG 419
+ AR+L + +P + V D + V PG+++P DG V GRSTVDES TG
Sbjct: 233 LQAKTARVLRQGQE----LTLPITEVQVEDWVRVRPGEKVPVDGEVIDGRSTVDESMVTG 288
Query: 420 EPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
E LPV K EV ++N G+LT+ R G ET + IV+LV++AQ+ +AP+QRLADQ
Sbjct: 289 ESLPVQKQVGDEVIGATLNKTGSLTIRATRVGRETFLAQIVQLVQQAQASKAPIQRLADQ 348
Query: 480 VSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLA 539
V+G F VIA++ TFV W + G V+LAL + VL++ACPCALGLA
Sbjct: 349 VTGWFVPAVIAIAILTFVLW-----------FNWIGNVTLALITAVGVLIIACPCALGLA 397
Query: 540 TPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 599
TPT+++VGT GA G+L++ LE + TV+ DKTGTLT G+P VT + G D
Sbjct: 398 TPTSIMVGTGKGAEYGILIKSAESLELAQTIQTVILDKTGTLTQGQPSVTDFLAIG---D 454
Query: 600 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGS 659
+ +Q +L +AA +E+ + HP+ +AIV E V D F PGS
Sbjct: 455 RDQQQT---------LLGWAASLENYSEHPLAEAIVRYGEAQGITLSTVTD--FEAIPGS 503
Query: 660 GTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVED 718
G +E + +GT WL G++TS Q + E + +++V V D L ++ + D
Sbjct: 504 GVQGQVEGIWLQIGTQRWLGELGIETSALQNQWEDWEAAGKTVVGVAADGHLQAILSIAD 563
Query: 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE 778
+++ + VV SL G+ V ML+GD + +A+ +A VGI +VL+ V+P++K + +
Sbjct: 564 QLKPSSVAVVRSLQRLGLQVVMLTGDNRRTADAIAQAVGI--TQVLAEVRPDQKAAQVAQ 621
Query: 779 LQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838
LQ+ VVAMVGDGINDA ALA + +G+A+G G A + + L+ L ++ A++LS
Sbjct: 622 LQSRGQVVAMVGDGINDAPALAQADVGIAIGTGTDVAIAASDITLISGDLQGIVTAIQLS 681
Query: 839 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLL 898
R TM ++QNL++AF YN+ GIPIAAG+L P+ G +L+P +AGA M SS+ V+ N+L L
Sbjct: 682 RATMTNIRQNLFFAFIYNVAGIPIAAGILYPLLGWLLSPMLAGAAMAFSSVSVVTNALRL 741
Query: 899 R 899
R
Sbjct: 742 R 742
|
May play a role in the osmotic adaptation. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/801 (34%), Positives = 435/801 (54%), Gaps = 88/801 (10%)
Query: 118 EELSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSK 173
E++ +L DV + L++ GMTC C+ ++++L V A+VNLTTE A++
Sbjct: 59 EQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI----- 113
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
K P+ EAL K + + G+ + + + + + K+ LK L +
Sbjct: 114 -KYYPSATNT--EALIKRIQNIGYDAETKTSS--------KAQSNRKKQELKHKRNKLII 162
Query: 234 SWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGA 293
S L L+ + HI + S + + L LS G+Q + K+L G+
Sbjct: 163 SAILSLPLLLVMVVHI--SPISIPSILVNPWVQLILSTPVQFIIGWQFYVGAYKNLRNGS 220
Query: 294 PNMNTLVGLGAVSSFTVSSLAALV--------PKLGWKAFFEEPIMLIAFVLLGKNLEQR 345
NM+ LV +G +++ S ++ P L +FE +LI +LLGK LE R
Sbjct: 221 ANMDVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHL----YFETSAILITLILLGKYLEAR 276
Query: 346 AKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405
AK + T+ ++ LL + +AR++ +N I +P + + VGD +++ PG++IP DG V
Sbjct: 277 AKSQTTNALSELLNLQAKEARVIKENKE----IMLPLDKVKVGDTLLIKPGEKIPVDGKV 332
Query: 406 RAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465
G +++DES TGE +PV K V ++N NG++ +E + GG+TA+ I+++VE+
Sbjct: 333 TKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIKVVED 392
Query: 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSC 525
AQS +AP+QRLAD +SG+F V++++ TF+ W +F V P G AL +
Sbjct: 393 AQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHP------GQFEPALVSAI 443
Query: 526 SVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGR 585
SVLV+ACPCALGLATPT+++VGT A G+L +GG +E+ V+T+V DKTGT+T G+
Sbjct: 444 SVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVLDKTGTITNGQ 503
Query: 586 PVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQN 645
PVVT V + + L+ A E+ + HP+ AIV ++ +
Sbjct: 504 PVVTDYV------------------GDNDTLQLLASAENASEHPLADAIV---TYAKDKG 542
Query: 646 VKVADG-TFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN------ 698
+ + D TF PG G A I +++ VG + + + S ++ D +N
Sbjct: 543 LNLLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISN----KLNDQLNHYEHLG 598
Query: 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758
Q+ + + VDN + G+I V D +++DA + L + I V ML+GD +A+ +A VGI
Sbjct: 599 QTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGI 658
Query: 759 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 818
+ V++ V P EK I+ LQ+ VAMVGDGINDA AL + IG+A+G G A E
Sbjct: 659 --EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAEVAIEA 716
Query: 819 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 878
A + ++G L + A++ S+ T+K ++QNL+WAFGYN+ GIPIAA L L P
Sbjct: 717 ADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL-------LAPW 769
Query: 879 IAGALMGLSSIGVMANSLLLR 899
IAGA M LSS+ V+ N+L L+
Sbjct: 770 IAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/801 (34%), Positives = 435/801 (54%), Gaps = 88/801 (10%)
Query: 118 EELSALSSDVII----LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSK 173
E++ +L DV + L++ GMTC C+ ++++L V A+VNLTTE A++
Sbjct: 59 EQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI----- 113
Query: 174 AKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
K P+ EAL K + + G+ + + + + + K+ LK L +
Sbjct: 114 -KYYPSATNT--EALIKRIQNIGYDAETKTSS--------KAQSNRKKQELKHKRNKLII 162
Query: 234 SWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGA 293
S L L+ + HI + S + + L LS G+Q + K+L G+
Sbjct: 163 SAILSLPLLLVMVVHI--SPISIPSILVNPWVQLILSTPVQFIIGWQFYVGAYKNLRNGS 220
Query: 294 PNMNTLVGLGAVSSFTVSSLAALV--------PKLGWKAFFEEPIMLIAFVLLGKNLEQR 345
NM+ LV +G +++ S ++ P L +FE +LI +LLGK LE R
Sbjct: 221 ANMDVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHL----YFETSAILITLILLGKYLEAR 276
Query: 346 AKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405
AK + T+ ++ LL + +AR++ +N I +P + + VGD +++ PG++IP DG V
Sbjct: 277 AKSQTTNALSELLNLQAKEARVIKENKE----IMLPLDKVKVGDTLLIKPGEKIPVDGKV 332
Query: 406 RAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465
G +++DES TGE +PV K V ++N NG++ +E + GG+TA+ I+++VE+
Sbjct: 333 TKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIKVVED 392
Query: 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSC 525
AQS +AP+QRLAD +SG+F V++++ TF+ W +F V P G AL +
Sbjct: 393 AQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHP------GQFEPALVSAI 443
Query: 526 SVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGR 585
SVLV+ACPCALGLATPT+++VGT A G+L +GG +E+ V+T+V DKTGT+T G+
Sbjct: 444 SVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVLDKTGTITNGQ 503
Query: 586 PVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQN 645
PVVT V + + L+ A E+ + HP+ AIV ++ +
Sbjct: 504 PVVTDYV------------------GDNDTLQLLASAENASEHPLADAIV---TYAKDKG 542
Query: 646 VKVADG-TFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN------ 698
+ + D TF PG G A I +++ VG + + + S ++ D +N
Sbjct: 543 LNLLDNDTFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISN----KLNDQLNHYEHLG 598
Query: 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758
Q+ + + VDN + G+I V D +++DA + L + I V ML+GD +A+ +A VGI
Sbjct: 599 QTAMMIAVDNQINGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGI 658
Query: 759 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 818
+ V++ V P EK I+ LQ+ VAMVGDGINDA AL + IG+A+G G A E
Sbjct: 659 --EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGAEVAIEA 716
Query: 819 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 878
A + ++G L + A++ S+ T+K ++QNL+WAFGYN+ GIPIAA L L P
Sbjct: 717 ADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL-------LAPW 769
Query: 879 IAGALMGLSSIGVMANSLLLR 899
IAGA M LSS+ V+ N+L L+
Sbjct: 770 IAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MW2) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 278/794 (35%), Positives = 420/794 (52%), Gaps = 85/794 (10%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
LD+ GMTC C++ ++++L V +A+VNLTTE +AKV + + L
Sbjct: 76 LDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTE--------QAKVDYYPEETDADKLV 127
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
+ G+ +S++D D + K L+ L +S L L+ H+
Sbjct: 128 TRIQKLGYDASIKDNNKD--------QTSRKAEALQHKLIKLIISAVLSLPLLMLMFVHL 179
Query: 250 LGAKASWIHV---FHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVS 306
+H+ F + F L+ G+Q + K+L G NM+ LV +G +
Sbjct: 180 FN-----MHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLRNGGANMDVLVAVGTSA 234
Query: 307 SFTVSSLAALVPKLGWKA-----FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
++ S+ +V L +FE +LI +L GK LE RAK + T+ + LL +
Sbjct: 235 AY-FYSIYEMVRWLNGSTTQPHLYFETSAVLITLILFGKYLEARAKSQTTNALGELLSLQ 293
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
+AR+L D + + +P N +HVGD ++V PG++IP DG + G + +DES TGE
Sbjct: 294 AKEARILKDGNE----VMIPLNEVHVGDTLIVKPGEKIPVDGKIIKGMTAIDESMLTGES 349
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PV K + V ++N NGT+T+ + GG+TA+ +I+++VEEAQS +AP+QRLAD +S
Sbjct: 350 IPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIIS 409
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATP 541
G+F V+ ++ TF+ W V P G AL S SVLV+ACPCALGLATP
Sbjct: 410 GYFVPIVVGIALLTFIVWITL---VTP------GTFEPALVASISVLVIACPCALGLATP 460
Query: 542 TAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN 601
T+++VGT A G+L +GG +E+ ++T+V DKTGT+T GRPVVT
Sbjct: 461 TSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDY---------- 510
Query: 602 SKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGT 661
H + + L+ A E ++ HP+ +AIV A+ Q TF PG G
Sbjct: 511 ------H--GDNQTLQLLATAEKDSEHPLAEAIVNYAK--EKQLTLTETTTFKAVPGHGI 560
Query: 662 VAIIEDRKVSVGTIDW-------LRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLI 714
A I+ + VG L H D T+ E + ++ + + V+ L G+I
Sbjct: 561 EATIDHHHILVGNRKLMADNDISLPKHISDDLTYYERD-----GKTAMLIAVNYSLTGII 615
Query: 715 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKR 774
V D ++D A + L GI V ML+GD KN+A+ +A VGI D V++ + P EK
Sbjct: 616 AVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI--DTVIADILPEEKAA 673
Query: 775 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834
I +LQ VAMVGDG+NDA AL + IG+A+G G A E A + ++G L + A
Sbjct: 674 QIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKA 733
Query: 835 LELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMAN 894
+ S+ T++ ++QNL+WAFGYNI GIPIAA L L P +AGA M LSS+ V+ N
Sbjct: 734 IYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMALSSVSVVTN 786
Query: 895 SLLL-RLKFSSKQK 907
+L L +++ ++K
Sbjct: 787 ALRLKKMRLEPRRK 800
|
Involved in copper export. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 932 | ||||||
| 224073351 | 865 | heavy metal ATPase [Populus trichocarpa] | 0.904 | 0.974 | 0.790 | 0.0 | |
| 225448275 | 928 | PREDICTED: putative copper-transporting | 0.855 | 0.858 | 0.805 | 0.0 | |
| 255581361 | 947 | copper-transporting atpase paa1, putativ | 0.983 | 0.968 | 0.723 | 0.0 | |
| 224059034 | 879 | heavy metal ATPase [Populus trichocarpa] | 0.918 | 0.973 | 0.766 | 0.0 | |
| 356524832 | 935 | PREDICTED: putative copper-transporting | 0.843 | 0.840 | 0.753 | 0.0 | |
| 449438779 | 933 | PREDICTED: copper-transporting ATPase PA | 0.860 | 0.859 | 0.743 | 0.0 | |
| 42573157 | 949 | putative copper-transporting ATPase PAA1 | 0.966 | 0.949 | 0.672 | 0.0 | |
| 3549654 | 870 | metal-transporting P-type ATPase (fragme | 0.855 | 0.916 | 0.720 | 0.0 | |
| 42573159 | 949 | putative copper-transporting ATPase PAA1 | 0.966 | 0.949 | 0.670 | 0.0 | |
| 297802654 | 949 | predicted protein [Arabidopsis lyrata su | 0.963 | 0.946 | 0.672 | 0.0 |
| >gi|224073351|ref|XP_002304082.1| heavy metal ATPase [Populus trichocarpa] gi|222841514|gb|EEE79061.1| heavy metal ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1315 bits (3403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/849 (79%), Positives = 745/849 (87%), Gaps = 6/849 (0%)
Query: 62 PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGGEELS 121
P +R RLEC+SS AASFG G GG GGGGGGGG+ G D +S S G EE
Sbjct: 17 PLVRLRLECVSSSAASFGTTSGGGGGGGEFGGGGGGGGSNGGDA-ESNSVAEAVGAEEAP 75
Query: 122 ALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQ 181
LS DVIILDVGGMTCGGCAASVKRILESQ QV SASVNL TETAIV PV++AK++PNWQ
Sbjct: 76 VLSPDVIILDVGGMTCGGCAASVKRILESQSQVFSASVNLATETAIVRPVTEAKIVPNWQ 135
Query: 182 RQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVC 241
+QLGEALAKHLTSCGF S+LRD G DN FKVFE KM EKR+RLKESG LAVSWALCAVC
Sbjct: 136 KQLGEALAKHLTSCGFISNLRDEGRDNVFKVFEKKMDEKRDRLKESGHQLAVSWALCAVC 195
Query: 242 LVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVG 301
L+GH+SHI KASWIHVFHS GFHLSLSLFTLLGPG QLI DGVKSLFKGAPNMNTLVG
Sbjct: 196 LLGHVSHIFATKASWIHVFHSVGFHLSLSLFTLLGPGRQLIHDGVKSLFKGAPNMNTLVG 255
Query: 302 LGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
LGA+SSF VSSLAALVPKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKA SDMTGLL +L
Sbjct: 256 LGALSSFAVSSLAALVPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSVL 315
Query: 362 PSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTG 419
P+KARL+V+ DA D SI+EVPC+SL VGD IVVLPGDR+PADG VRAGRST+DESSFTG
Sbjct: 316 PTKARLVVNGDATDLGSIVEVPCSSLSVGDQIVVLPGDRVPADGTVRAGRSTIDESSFTG 375
Query: 420 EPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
EPLPVTK+P S V+AGSINLNGTLT+EV+RPGGETAMGDIVRLVEEAQSREAPVQRLAD+
Sbjct: 376 EPLPVTKLPGSHVSAGSINLNGTLTIEVKRPGGETAMGDIVRLVEEAQSREAPVQRLADK 435
Query: 480 VSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLA 539
VSGHFTYGV+A+SAATF+FW++FG H+LP A+ G PVSLALQLSCSVLVVACPCALGLA
Sbjct: 436 VSGHFTYGVMAISAATFMFWSMFGTHILPAALNQGNPVSLALQLSCSVLVVACPCALGLA 495
Query: 540 TPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 599
TPTA+LVGTSLGATRGLLLRGGN+LEKF+MVN+VVFDKTGTLTIGRPVVTKVV+ G +
Sbjct: 496 TPTAVLVGTSLGATRGLLLRGGNVLEKFSMVNSVVFDKTGTLTIGRPVVTKVVSLGGMEI 555
Query: 600 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK-VADGTFIEEPG 658
+S+ P SE E+LK AAGVESNT+HP+GKAIVEAA ++C +VK V DGTF+EEPG
Sbjct: 556 TDSQLKPNATWSEVEVLKLAAGVESNTIHPVGKAIVEAARAASCTSVKQVTDGTFMEEPG 615
Query: 659 SGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVED 718
SG VA IE++ VSVGT+DW++ HGV + FQEV ED+ NQS+VYVGVDN LAGLIY ED
Sbjct: 616 SGAVATIENKVVSVGTLDWIQRHGVCENPFQEV--EDIKNQSVVYVGVDNTLAGLIYFED 673
Query: 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE 778
+IR+DA HVV SLS QGI VYMLSGD+K +AEYVASLVGIPK+KVLSGVKP+EKK+FI+E
Sbjct: 674 QIREDARHVVESLSCQGINVYMLSGDRKKNAEYVASLVGIPKEKVLSGVKPDEKKKFISE 733
Query: 779 LQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838
LQ D+N+VAMVGDGINDAAALA SH+GVAMG GVGAASEV+S+VLMGNRLSQ+L ALELS
Sbjct: 734 LQKDQNIVAMVGDGINDAAALAESHVGVAMGEGVGAASEVSSIVLMGNRLSQVLDALELS 793
Query: 839 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLL 898
RLTMKTVKQNLWWAF YNIVGIPIAAGVLLP+TGT+LTPSIAGALMG SSIGVM NSLLL
Sbjct: 794 RLTMKTVKQNLWWAFAYNIVGIPIAAGVLLPITGTILTPSIAGALMGFSSIGVMMNSLLL 853
Query: 899 RLKFSSKQK 907
RLKFSSKQK
Sbjct: 854 RLKFSSKQK 862
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448275|ref|XP_002274497.1| PREDICTED: putative copper-transporting ATPase PAA1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1314 bits (3400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/802 (80%), Positives = 714/802 (89%), Gaps = 5/802 (0%)
Query: 118 EELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVI 177
EE++ S DVIILDVGGMTCGGCAASVKRILESQPQVSS SVNLTTETAIVWPVS+AKVI
Sbjct: 105 EEVTGFSPDVIILDVGGMTCGGCAASVKRILESQPQVSSVSVNLTTETAIVWPVSEAKVI 164
Query: 178 PNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWAL 237
PNWQ+QLGE LAKHLT+CGFKS+ RD DNFFKVFE KM EKRN+LKESGR LAVSWAL
Sbjct: 165 PNWQQQLGEELAKHLTNCGFKSNPRDSVRDNFFKVFERKMDEKRNKLKESGRELAVSWAL 224
Query: 238 CAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMN 297
CAVCL GHLSH LG KASWIH FHSTGFHLSLSLFTLLGPG LILDG+KS KGAPNMN
Sbjct: 225 CAVCLFGHLSHFLGTKASWIHAFHSTGFHLSLSLFTLLGPGRGLILDGLKSFLKGAPNMN 284
Query: 298 TLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGL 357
TLVGLGAVSSF+VSSLAAL+P+LGWKAFFEEPIMLIAFVLLG+NLEQRAKIKATSDMTGL
Sbjct: 285 TLVGLGAVSSFSVSSLAALIPELGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGL 344
Query: 358 LGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDES 415
L ILP+KARL ++ D+++ S +EVPCN+L VGD IVVLPGDR+PADG+VRAGRSTVDES
Sbjct: 345 LSILPAKARLFINGDSEEFSSTVEVPCNNLSVGDQIVVLPGDRVPADGIVRAGRSTVDES 404
Query: 416 SFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQR 475
SFTGEPLPVTK+P +EV+AGSINLNGTL VEVRRPGGETAMGDIVRLVE AQSREAPVQR
Sbjct: 405 SFTGEPLPVTKLPGAEVSAGSINLNGTLRVEVRRPGGETAMGDIVRLVEAAQSREAPVQR 464
Query: 476 LADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCA 535
LAD+V+GHFTYGV+ALSAATF+FWNLFGA +LP A G VSLALQLSCSVLVVACPCA
Sbjct: 465 LADKVAGHFTYGVMALSAATFMFWNLFGARILPAAFHQGSSVSLALQLSCSVLVVACPCA 524
Query: 536 LGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSG 595
LGLATPTA+LVGTSLGAT+GLLLRGGNILEKF+ +NT+VFDKTGTLTIGRPVVTKVVT G
Sbjct: 525 LGLATPTAILVGTSLGATKGLLLRGGNILEKFSEMNTIVFDKTGTLTIGRPVVTKVVTPG 584
Query: 596 SLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIE 655
D +S+++ SE E+LK AAGVESNT+HP+GKAIVEAA NCQNVKV DGTF+E
Sbjct: 585 CEKDTDSRKSSKSIWSEVEVLKLAAGVESNTIHPVGKAIVEAARAVNCQNVKVVDGTFVE 644
Query: 656 EPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIY 715
EPGSG VA +E++KVSVGT DW++ HGV + FQEV ++L NQS+VYVGVD LAGLIY
Sbjct: 645 EPGSGAVATVENKKVSVGTFDWVQRHGVQENPFQEV--DELKNQSVVYVGVDGTLAGLIY 702
Query: 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRF 775
ED+IRDDA HVV SLS QGI VYMLSGDK+N+AE+VAS VGIPKDKVLSGVKPNEK +F
Sbjct: 703 FEDQIRDDARHVVESLSRQGISVYMLSGDKRNAAEHVASSVGIPKDKVLSGVKPNEKSKF 762
Query: 776 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835
I ELQ N VAMVGDGINDAAALASS IG+AMGGGVGAASEV+S+VLMGNRLSQLL A
Sbjct: 763 IRELQKAHNTVAMVGDGINDAAALASSDIGIAMGGGVGAASEVSSIVLMGNRLSQLLDAF 822
Query: 836 ELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANS 895
ELSRLTMKTVKQNLWWAF YNIVGIPIAAG+LLP+TGTMLTPSIAGALMGLSS+GVM NS
Sbjct: 823 ELSRLTMKTVKQNLWWAFAYNIVGIPIAAGMLLPITGTMLTPSIAGALMGLSSVGVMTNS 882
Query: 896 LLLRLKFSSKQKASFQA-PSSR 916
LLLR KFS+KQK ++A P+S+
Sbjct: 883 LLLRSKFSAKQKQIYEASPNSK 904
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581361|ref|XP_002531490.1| copper-transporting atpase paa1, putative [Ricinus communis] gi|223528899|gb|EEF30897.1| copper-transporting atpase paa1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1287 bits (3331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/948 (72%), Positives = 785/948 (82%), Gaps = 31/948 (3%)
Query: 1 MESALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPLTSISTQTLPFASLSRRKFSA 58
MES L +STT + TLF +SKA RHF LT + + +SL R+F++
Sbjct: 1 MESTLCISTTAASFTLFKLSKALNRHF-----------TLTKAAASSSSSSSLFTRRFTS 49
Query: 59 VLP------------PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGG 106
P IR RL C+S+ A+S + G G GG GGGGG SD G
Sbjct: 50 FHSSSSSLRSLCALSPLIRHRLACVSNSASS-SFSAGGNGSGGPFGGDGGGGGGDRSDAG 108
Query: 107 DSKSKLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA 166
DSKS L G E++SALS DVIILDVGGMTCGGCAASVKRILESQPQVSSA+VNLTTETA
Sbjct: 109 DSKSNLAAGGTEDVSALSPDVIILDVGGMTCGGCAASVKRILESQPQVSSATVNLTTETA 168
Query: 167 IVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKE 226
+VWPVS+A VIPNW+++LGEALAKHLT+CGF S+ RD G NFF VFE KM EKR RLKE
Sbjct: 169 VVWPVSEATVIPNWKKELGEALAKHLTTCGFSSNPRDAGRQNFFDVFEKKMDEKRARLKE 228
Query: 227 SGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGV 286
SGR LAVSWALCAVCL+GHLSHI KASWIH+FHSTGFHLS+SLFTLLGPG QLILDG+
Sbjct: 229 SGRELAVSWALCAVCLLGHLSHIFPLKASWIHLFHSTGFHLSMSLFTLLGPGRQLILDGL 288
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRA 346
KSLFKGAPNMNTLVGLGA+SSF VSSLAAL+P+LGWKAFFEEPIMLIAFVLLG+NLEQRA
Sbjct: 289 KSLFKGAPNMNTLVGLGALSSFAVSSLAALIPRLGWKAFFEEPIMLIAFVLLGRNLEQRA 348
Query: 347 KIKATSDMTGLLGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGV 404
KIKA SDMTGLL ILPSKARLLV ++ +D SI+EVPC SL VGD IVVLPGDR+PADG+
Sbjct: 349 KIKAASDMTGLLSILPSKARLLVQSNIEDPGSIVEVPCTSLSVGDQIVVLPGDRVPADGI 408
Query: 405 VRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVE 464
VRAGRST+DESSFTGEPLPVTK+P S+VAAGSINLNGTLTVEV+RPGGETA+GDIVRLVE
Sbjct: 409 VRAGRSTIDESSFTGEPLPVTKLPGSKVAAGSINLNGTLTVEVQRPGGETAIGDIVRLVE 468
Query: 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524
EAQ REAPVQRLAD+VSGHFTYGV+ALSAATF+FW LFG H+LP A+ +G PVSLALQLS
Sbjct: 469 EAQGREAPVQRLADKVSGHFTYGVMALSAATFMFWKLFGTHMLPPAVYHGNPVSLALQLS 528
Query: 525 CSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIG 584
CSVLV+ACPCALGLATPTA+LVGTSLGATRGLLLRGGN+LEKF+MV T+VFDKTGTLTIG
Sbjct: 529 CSVLVIACPCALGLATPTAVLVGTSLGATRGLLLRGGNVLEKFSMVKTIVFDKTGTLTIG 588
Query: 585 RPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQ 644
RPVVTKVVT G + +++ N H SE E+L+ AA VESNT+HP+GKAIV+AA+ Q
Sbjct: 589 RPVVTKVVTLGDIKITDTQMNANHKWSEVEVLRLAAAVESNTLHPVGKAIVQAAQAVTYQ 648
Query: 645 NVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYV 704
N+KV DGTF+EEPGSG VA +++++VSVGT+DW++ +GVD FQEV EDL NQS+VYV
Sbjct: 649 NMKVTDGTFMEEPGSGAVATVDNKQVSVGTLDWVQRNGVDGILFQEV--EDLKNQSIVYV 706
Query: 705 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 764
GV+N LAG+IY+ED+IR+DA VV SL QGI VYMLSGDK+ +AE+VAS+VGI K+KVL
Sbjct: 707 GVENTLAGIIYLEDQIREDARQVVESLCRQGIDVYMLSGDKRTTAEHVASVVGIQKEKVL 766
Query: 765 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 824
+GVKP+EKK+FI+ELQ +N+VAMVGDGINDAAALA SH+GVAMGGGVGAASEV+SVVL
Sbjct: 767 AGVKPDEKKKFISELQKHQNIVAMVGDGINDAAALALSHVGVAMGGGVGAASEVSSVVLT 826
Query: 825 GNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALM 884
GNRLSQLL ALELSRLTMKTVKQNLWWAF YNI+GIPIAAG+LLP+TGTMLTPSIAGALM
Sbjct: 827 GNRLSQLLDALELSRLTMKTVKQNLWWAFAYNIIGIPIAAGMLLPLTGTMLTPSIAGALM 886
Query: 885 GLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLMDLKGK 932
GLSSIGVM NSLLLR KFSSKQ +A S N + S L+D K
Sbjct: 887 GLSSIGVMTNSLLLRFKFSSKQTQDSKA-SPSTNVSFGSDHLIDQTKK 933
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059034|ref|XP_002299685.1| heavy metal ATPase [Populus trichocarpa] gi|222846943|gb|EEE84490.1| heavy metal ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1275 bits (3299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/865 (76%), Positives = 750/865 (86%), Gaps = 9/865 (1%)
Query: 62 PHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGGEELS 121
P +R RLEC+SS AASFG + G GG G G GGGGG +S S G G EE+S
Sbjct: 3 PLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGGGGSDGGDAESNSVAGAVGAEEVS 62
Query: 122 ALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQ 181
ALS DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNL TETAIVWPVS+AKV+PNWQ
Sbjct: 63 ALSPDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLATETAIVWPVSEAKVVPNWQ 122
Query: 182 RQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVC 241
++LGEALAKHLTSCGF S+LRD G NFFK+FE KM EKR+RLKES LAVS ALCAVC
Sbjct: 123 KELGEALAKHLTSCGFMSNLRDAGRQNFFKIFEKKMDEKRDRLKESSHQLAVSCALCAVC 182
Query: 242 LVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVG 301
L+GH+SH+ AK WIH FHS GFH+SLSLFTLLGPG QLILDGVKSL KGAPNMNTLVG
Sbjct: 183 LLGHVSHMFAAKPPWIHAFHSVGFHVSLSLFTLLGPGRQLILDGVKSLSKGAPNMNTLVG 242
Query: 302 LGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
LGA+SSF VSSLAAL+PKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKATSDMTGLL +L
Sbjct: 243 LGALSSFAVSSLAALIPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSVL 302
Query: 362 PSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTG 419
P+KARL+V+ DAKD SI+EVPC+SL VGD IVVLPGDR+PADG V AGRST+DESSFTG
Sbjct: 303 PTKARLVVNGDAKDLGSIVEVPCSSLSVGDKIVVLPGDRVPADGTVTAGRSTIDESSFTG 362
Query: 420 EPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
EPLPVTK+P S+V+AGSINLNGTLT+EV+RPGGETAMGDIVRLVEEAQSREAPVQRLAD+
Sbjct: 363 EPLPVTKLPGSQVSAGSINLNGTLTIEVKRPGGETAMGDIVRLVEEAQSREAPVQRLADK 422
Query: 480 VSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLA 539
VSGHFTYGV+ +SAATFVFW++FG +LP A+ G P+SLALQLSCSVLVVACPCALGLA
Sbjct: 423 VSGHFTYGVMTISAATFVFWSMFGTRILPAALNQGNPISLALQLSCSVLVVACPCALGLA 482
Query: 540 TPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 599
TPTA+LVGTSLGATRGLLLRGGN+LEKF+MVN+VVFDKTGTLTIGRP VTKVV G +
Sbjct: 483 TPTAVLVGTSLGATRGLLLRGGNVLEKFSMVNSVVFDKTGTLTIGRPAVTKVVPLGGMKI 542
Query: 600 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGS 659
+S+ N LSE E+LK AAGVESNT+HP+GKAIVEAA+ + CQNVKV DGTF+EEPGS
Sbjct: 543 TDSQLNAT--LSEVELLKLAAGVESNTIHPVGKAIVEAAQAAGCQNVKVTDGTFMEEPGS 600
Query: 660 GTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR 719
G VA IE++ VS+GT+DW++ + T ++ +L NQS+VYVGVDN LAGLIY ED+
Sbjct: 601 GAVATIENKVVSIGTLDWIQRYF--TCWLLCIKYHNLKNQSVVYVGVDNTLAGLIYFEDQ 658
Query: 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINEL 779
IR+DA VV SLSSQGI VYMLSGDKK++AE+VASLVGIPK+KVLSGVKP+EKKRFI+EL
Sbjct: 659 IREDARQVVESLSSQGINVYMLSGDKKSTAEHVASLVGIPKEKVLSGVKPDEKKRFISEL 718
Query: 780 QNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSR 839
Q D+++VAMVGDGINDA ALA SH+GVAMGGGVGAASEV+S+VLMGNRLSQ+L ALELSR
Sbjct: 719 QKDQSIVAMVGDGINDAGALAESHVGVAMGGGVGAASEVSSIVLMGNRLSQVLDALELSR 778
Query: 840 LTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 899
LTMKTVKQNLWWAF YNIVGIPIAAG+LLPV GT+LTPSIAGALMGLSSIGVM NSLLLR
Sbjct: 779 LTMKTVKQNLWWAFAYNIVGIPIAAGMLLPVNGTILTPSIAGALMGLSSIGVMTNSLLLR 838
Query: 900 LKFSSKQKASFQA-PSSRVNSNVDS 923
KFS KQK + A P++++ +VDS
Sbjct: 839 FKFSLKQKKVYGASPNTKI--DVDS 861
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524832|ref|XP_003531032.1| PREDICTED: putative copper-transporting ATPase PAA1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/806 (75%), Positives = 689/806 (85%), Gaps = 20/806 (2%)
Query: 111 KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWP 170
KL G +ELSALS DVIILDV GM CGGCAA+VKRILE+QPQVSSASVNLTTETAIVWP
Sbjct: 118 KLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENQPQVSSASVNLTTETAIVWP 177
Query: 171 VSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRG 230
VS+AK PNWQ+QLGEALA+HLTSCG+ SSLRD DNF ++FE KM E+ +L+ESGR
Sbjct: 178 VSEAKNAPNWQKQLGEALAEHLTSCGYNSSLRDSTRDNFLQIFERKMEERHRQLRESGRE 237
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLF 290
LAVSWALCAVCLVGH SH AKA WIHVFHS GFHLSLSLFTLLGPG QLILDG+KSL
Sbjct: 238 LAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSIGFHLSLSLFTLLGPGRQLILDGLKSLL 297
Query: 291 KGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKA 350
K PNMNTLVGLGA+SSFTVSS AAL+PKLGWKAFFEEPIMLIAFVLLG+NLEQRAKIKA
Sbjct: 298 KRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKA 357
Query: 351 TSDMTGLLGILPSKARLLVDNDAKD--SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408
SDMTGLL +LP KARLL++N + S++EVP +SL VGD I+VLPGDRIPADGVVR+G
Sbjct: 358 ASDMTGLLSLLPPKARLLLNNGETEVGSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRSG 417
Query: 409 RSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS 468
RSTVDESSFTGEPLPVTK+P SEVAAGSINLNGTLT+EV+RPG ETAM +IVRLVEEAQS
Sbjct: 418 RSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVQRPGSETAMANIVRLVEEAQS 477
Query: 469 REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVL 528
REAPVQRLAD+V+GHFTYGV+A SAATF FW+L+G H+LP A+ G VSLALQL+CSVL
Sbjct: 478 REAPVQRLADKVAGHFTYGVMATSAATFTFWSLYGTHILPPALYQGRAVSLALQLACSVL 537
Query: 529 VVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 588
VVACPCALGLATPTA+LVGTSLGA RGLLLRGGNILEKFAMV+TVVFDKTGTLT+GRPVV
Sbjct: 538 VVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTVGRPVV 597
Query: 589 TKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKV 648
T +V + + S Q + LS+ E+L+ AA VE+N+VHP+GKAIV+AA+ +NC N KV
Sbjct: 598 TNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVHPVGKAIVDAAQAANCHNAKV 657
Query: 649 ADGTFIEEPGSGTVAIIEDRKVSVGTIDWL-------RSHGVDTSTFQEVEMEDLMNQSL 701
DGTF+EEPGSG VA I D+KVSVGT++W+ R H + ++ NQS
Sbjct: 658 KDGTFLEEPGSGAVATIYDKKVSVGTLEWITRYLVCPRIHNIKSN-----------NQSF 706
Query: 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 761
VYVGVD+ LAGLIY ED IR+DA VV+ LS Q IGVYMLSGDK+N+AE+VASLVGIPK+
Sbjct: 707 VYVGVDDTLAGLIYFEDEIREDARDVVDRLSKQNIGVYMLSGDKRNAAEHVASLVGIPKE 766
Query: 762 KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASV 821
KVLS VKP+EKK+FINELQ D N+VAMVGDGINDAAALASSH+G+A+GGGVGAASEV+S+
Sbjct: 767 KVLSEVKPDEKKKFINELQKDNNIVAMVGDGINDAAALASSHVGIALGGGVGAASEVSSI 826
Query: 822 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAG 881
VLM N+LSQ++ ALELSRLTM T+KQNLWWAF YNIVGIPIAAGVL P+ GT+LTPSIAG
Sbjct: 827 VLMRNQLSQIVDALELSRLTMNTIKQNLWWAFIYNIVGIPIAAGVLFPINGTVLTPSIAG 886
Query: 882 ALMGLSSIGVMANSLLLRLKFSSKQK 907
ALMGLSSIGVM NSLLLR KFSSKQK
Sbjct: 887 ALMGLSSIGVMTNSLLLRFKFSSKQK 912
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438779|ref|XP_004137165.1| PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1229 bits (3181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/807 (74%), Positives = 698/807 (86%), Gaps = 5/807 (0%)
Query: 110 SKLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
+KL EE+S+L + VIILDVGGMTCGGCAASVKRILE+QPQVSSASVNLTTETA++W
Sbjct: 120 NKLVSGSAEEISSLLASVIILDVGGMTCGGCAASVKRILENQPQVSSASVNLTTETAVIW 179
Query: 170 PVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGR 229
PV + K P+ ++LGE LA HLT CGF SSLRD G DN F VFE KM EKRNRLKESGR
Sbjct: 180 PVPEVKDSPHRVKKLGETLANHLTRCGFASSLRDSGRDNIFMVFEKKMEEKRNRLKESGR 239
Query: 230 GLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
L SWALCAVCL+GH+SH GAKASWIH FH+T FHLSL LFTLLGPG QLI+DG+KSL
Sbjct: 240 NLVFSWALCAVCLLGHISHFFGAKASWIHTFHTTQFHLSLCLFTLLGPGRQLIIDGMKSL 299
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIK 349
KGAPNMNTLVGLGA+SSF+VSSLAAL+PKLGWKAFFEEP+MLIAFVLLG+NLEQRAKI+
Sbjct: 300 VKGAPNMNTLVGLGALSSFSVSSLAALMPKLGWKAFFEEPVMLIAFVLLGRNLEQRAKIR 359
Query: 350 ATSDMTGLLGILPSKARLLVDNDAK-DSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408
A SDMTGLL ILPSKARL+VD D + S +E+PC+SL +GD ++VLPGDRIPADG+V++G
Sbjct: 360 AASDMTGLLSILPSKARLVVDGDTELSSTVEIPCSSLSIGDEVIVLPGDRIPADGIVKSG 419
Query: 409 RSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS 468
RS VDESSFTGEPLPVTK+P S+VAAG+INLNGTLTV+V R GG+TAMGDI+RLVEEAQS
Sbjct: 420 RSIVDESSFTGEPLPVTKLPGSQVAAGTINLNGTLTVKVHRQGGDTAMGDIIRLVEEAQS 479
Query: 469 REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVL 528
REAPVQRLAD+VSGHFTYGV+ LSAATF+FW+ FG+ +LP A +G VSLALQLSCSVL
Sbjct: 480 REAPVQRLADKVSGHFTYGVMVLSAATFIFWSQFGSRILPAAFYHGSSVSLALQLSCSVL 539
Query: 529 VVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 588
VVACPCALGLATPTAMLVGTSLGAT+GLLLRGGNILE+F+MV+TVVFDKTGTLT+GRPVV
Sbjct: 540 VVACPCALGLATPTAMLVGTSLGATKGLLLRGGNILEQFSMVDTVVFDKTGTLTVGRPVV 599
Query: 589 TKV-VTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK 647
TKV TS + +++ N SE EILKFAA VESNTVHP+GKAIVEAA N ++K
Sbjct: 600 TKVFATSRYERNVDTQTNSHGNYSENEILKFAAAVESNTVHPVGKAIVEAARAVNGHSLK 659
Query: 648 VADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE---VEMEDLMNQSLVYV 704
V +GTF+EEPGSG VA +E+R +S+GT+DW++ HGV FQE ++ DL S+VYV
Sbjct: 660 VVEGTFVEEPGSGAVATVENRIISIGTLDWVQRHGVIVDDFQETDDLKAHDLKAHSVVYV 719
Query: 705 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 764
G+DN LAG IY ED IR+DA HVV++LS QGI Y+LSGDK+++AEY+ASLVGIPK+KV
Sbjct: 720 GIDNSLAGCIYYEDGIREDARHVVDTLSRQGINTYILSGDKRSNAEYIASLVGIPKEKVR 779
Query: 765 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 824
SGVKP+EKK+FI+ELQ + N+VAMVGDGINDAAALA++ IG+AMGGGVGAASEV+ +VLM
Sbjct: 780 SGVKPHEKKKFISELQENNNIVAMVGDGINDAAALATADIGIAMGGGVGAASEVSPIVLM 839
Query: 825 GNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALM 884
GNRLSQLL ALELSRLTMKTVKQNLWWAFGYNIVGIP+AAGVLLP+TGT+LTPSIAGALM
Sbjct: 840 GNRLSQLLDALELSRLTMKTVKQNLWWAFGYNIVGIPVAAGVLLPITGTILTPSIAGALM 899
Query: 885 GLSSIGVMANSLLLRLKFSSKQKASFQ 911
GLSS+GVMANSLLLR++FS +K S +
Sbjct: 900 GLSSVGVMANSLLLRIRFSQNRKKSLE 926
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573157|ref|NP_974675.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] gi|12643855|sp|Q9SZC9.1|HMA6_ARATH RecName: Full=Copper-transporting ATPase PAA1, chloroplastic; AltName: Full=Protein HEAVY METAL ATPASE 6; AltName: Full=Protein glucose insensitive root 1; Flags: Precursor gi|4490319|emb|CAB38810.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|7270300|emb|CAB80069.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|110737997|dbj|BAF00934.1| metal-transporting P-type ATPase [Arabidopsis thaliana] gi|332660839|gb|AEE86239.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/933 (67%), Positives = 743/933 (79%), Gaps = 32/933 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 587
LVVACPCALGLATPTAMLVGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT G PV
Sbjct: 550 LVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPV 609
Query: 588 VTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFSNC 643
VT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA NC
Sbjct: 610 VTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNC 660
Query: 644 QNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVY 703
Q +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY
Sbjct: 661 QTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVY 720
Query: 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763
+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V
Sbjct: 721 IGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERV 780
Query: 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVL 823
++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV+ VVL
Sbjct: 781 IAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVL 840
Query: 824 MGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGAL 883
MGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGAL
Sbjct: 841 MGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGAL 900
Query: 884 MGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 916
MG+SS+GVM NSLLLR +F S + P +
Sbjct: 901 MGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3549654|emb|CAA20565.1| metal-transporting P-type ATPase (fragment) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1182 bits (3058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/810 (72%), Positives = 689/810 (85%), Gaps = 13/810 (1%)
Query: 111 KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWP 170
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVWP
Sbjct: 54 KLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWP 113
Query: 171 VSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRG 230
V +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR
Sbjct: 114 VPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGRE 173
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLF 290
LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL
Sbjct: 174 LAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSLL 233
Query: 291 KGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKA 350
KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIKA
Sbjct: 234 KGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIKA 293
Query: 351 TSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410
TSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GRS
Sbjct: 294 TSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGRS 353
Query: 411 TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470
T+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSRE
Sbjct: 354 TIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSRE 413
Query: 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVV 530
APVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVLVV
Sbjct: 414 APVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVLVV 473
Query: 531 ACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTK 590
ACPCALGLATPTAMLVGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT G PVVT+
Sbjct: 474 ACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPVVTE 533
Query: 591 VVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNV 646
V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA NCQ +
Sbjct: 534 VII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNCQTM 584
Query: 647 KVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGV 706
K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY+GV
Sbjct: 585 KAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVYIGV 644
Query: 707 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG 766
DN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V++G
Sbjct: 645 DNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERVIAG 704
Query: 767 VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN 826
VKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV+ VVLMGN
Sbjct: 705 VKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVLMGN 764
Query: 827 RLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGL 886
RL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGALMG+
Sbjct: 765 RLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGALMGV 824
Query: 887 SSIGVMANSLLLRLKFSSKQKASFQAPSSR 916
SS+GVM NSLLLR +F S + P +
Sbjct: 825 SSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 854
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573159|ref|NP_974676.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] gi|332660841|gb|AEE86241.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1182 bits (3057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/933 (67%), Positives = 742/933 (79%), Gaps = 32/933 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHFLKRIPMAYRIQPL----TSISTQTLPFASLSR--- 53
+A++ S+ +L L TISKA RHF A + PL S S + L SR
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFTG----ARHLHPLLLARCSPSVRRLGGFHGSRFTS 69
Query: 54 -----RKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDS 108
R A + P IR RLEC+SS + SF + G GG GG GGG GG
Sbjct: 70 SNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGD 129
Query: 109 KS-KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAI 167
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAI
Sbjct: 130 SKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAI 189
Query: 168 VWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKES 227
VWPV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKES
Sbjct: 190 VWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKES 249
Query: 228 GRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVK 287
GR LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+K
Sbjct: 250 GRELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIK 309
Query: 288 SLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
SL KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAK
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAK 369
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
IKATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++
Sbjct: 370 IKATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKS 429
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
GRST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQ
Sbjct: 430 GRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQ 489
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
SREAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSV
Sbjct: 490 SREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSV 549
Query: 528 LVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 587
LVVACPCALGLATPTAMLVGTSLGA RGLLLRGG+ILEKF++V+TVVFDKTGTLT G PV
Sbjct: 550 LVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPV 609
Query: 588 VTKVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFSNC 643
VT+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA NC
Sbjct: 610 VTEVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNC 660
Query: 644 QNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVY 703
Q +K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY
Sbjct: 661 QTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVY 720
Query: 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763
+GVDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V
Sbjct: 721 IGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERV 780
Query: 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVL 823
++GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS++GVAMGGG GAASEV+ VVL
Sbjct: 781 IAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVL 840
Query: 824 MGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGAL 883
MGNRL+QLL A+ELSR TMKTVKQNLWWAFGYNIV IPIAAGVLLP+TGTMLTPS+AGAL
Sbjct: 841 MGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVRIPIAAGVLLPLTGTMLTPSMAGAL 900
Query: 884 MGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 916
MG+SS+GVM NSLLLR +F S + P +
Sbjct: 901 MGVSSLGVMTNSLLLRYRFFSNRNDKNVKPEPK 933
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802654|ref|XP_002869211.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315047|gb|EFH45470.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1181 bits (3054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/927 (67%), Positives = 742/927 (80%), Gaps = 29/927 (3%)
Query: 3 SALSLSTTTTTLTLFTISKA--RHF----------LKRIPMAYRIQPLTSISTQTLPFAS 50
+A++ S+ +L L TISKA RHF L R A R L +L ++
Sbjct: 14 TAMARSSGGPSLPLLTISKALNRHFSGARHLHPLLLARCSPAVR--RLGGFHGSSLTSSN 71
Query: 51 LSRRKFSAVLPPHIRCRLECMSSCAASFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKS 110
+ R A + P IR RL+C+S + SF + G GG GG GG GG
Sbjct: 72 SALRSLGAAVLPVIRHRLQCLSISSPSFRSISSGGGSGFGGYNGGSGGAGGGGSESGDSK 131
Query: 111 -KLGGRGGEELSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
KLG + +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVW
Sbjct: 132 SKLGAGTNDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVW 191
Query: 170 PVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGR 229
PV +AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR
Sbjct: 192 PVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGR 251
Query: 230 GLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
LAVSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL
Sbjct: 252 ELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSL 311
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIK 349
KG+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIK
Sbjct: 312 LKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIK 371
Query: 350 ATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409
ATSDMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GR
Sbjct: 372 ATSDMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGR 431
Query: 410 STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSR 469
ST+DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSR
Sbjct: 432 STIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSR 491
Query: 470 EAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLV 529
EAPVQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVLV
Sbjct: 492 EAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVLV 551
Query: 530 VACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 589
VACPCALGLATPTAMLVGTSLGA RGLLLRGG+ILEKF+ V+TVVFDKTGTLT G PVVT
Sbjct: 552 VACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSSVDTVVFDKTGTLTKGHPVVT 611
Query: 590 KVVTSGSLTDPNSKQNPIHPL----SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQN 645
+V+ +NP H L SE E+L AA VESNT HP+GKAIV+AA NCQ
Sbjct: 612 EVII---------PENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARACNCQT 662
Query: 646 VKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVG 705
+K DGTF EEPGSG VAI+ +++V+VGT++W++ HG ++ +E +L NQS+VY+G
Sbjct: 663 MKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWVQRHGATGNSTLALEEHELNNQSVVYIG 722
Query: 706 VDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS 765
VDN LA +I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI +++V++
Sbjct: 723 VDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINQERVIA 782
Query: 766 GVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMG 825
GVKP EKK FINELQ ++ +VAMVGDGINDAAALASS +GVAMGGG GAASEV+ VVLMG
Sbjct: 783 GVKPAEKKTFINELQKNKKIVAMVGDGINDAAALASSDVGVAMGGGAGAASEVSPVVLMG 842
Query: 826 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMG 885
NRL+QLL A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGALMG
Sbjct: 843 NRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGALMG 902
Query: 886 LSSIGVMANSLLLRLK-FSSKQKASFQ 911
+SS+GVM NSLLLR + FS++ +F+
Sbjct: 903 VSSLGVMTNSLLLRYRFFSNRNDKNFK 929
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 932 | ||||||
| TAIR|locus:2119265 | 949 | PAA1 "P-type ATP-ase 1" [Arabi | 0.909 | 0.893 | 0.653 | 4e-296 | |
| TAIR|locus:504956435 | 883 | PAA2 "P-type ATPase of Arabido | 0.821 | 0.867 | 0.391 | 5.2e-136 | |
| UNIPROTKB|P74512 | 780 | slr1950 "Cation-transporting A | 0.792 | 0.947 | 0.386 | 8.7e-127 | |
| TIGR_CMR|CHY_0940 | 838 | CHY_0940 "copper-translocating | 0.790 | 0.879 | 0.321 | 4.1e-102 | |
| TIGR_CMR|SPO_0794 | 828 | SPO_0794 "copper-translocating | 0.468 | 0.527 | 0.331 | 1.3e-99 | |
| TAIR|locus:2031361 | 995 | HMA5 "heavy metal atpase 5" [A | 0.649 | 0.608 | 0.373 | 3.3e-98 | |
| POMBASE|SPBC29A3.01 | 904 | ccc2 "copper transporting ATPa | 0.731 | 0.754 | 0.333 | 3.4e-92 | |
| TIGR_CMR|DET_0953 | 828 | DET_0953 "copper-translocating | 0.333 | 0.375 | 0.383 | 9.5e-91 | |
| TAIR|locus:2156354 | 1001 | RAN1 "RESPONSIVE-TO-ANTAGONIST | 0.648 | 0.603 | 0.365 | 6.3e-89 | |
| ASPGD|ASPL0000011958 | 1182 | ygA [Emericella nidulans (taxi | 0.548 | 0.432 | 0.366 | 1.3e-88 |
| TAIR|locus:2119265 PAA1 "P-type ATP-ase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2843 (1005.8 bits), Expect = 4.0e-296, P = 4.0e-296
Identities = 558/854 (65%), Positives = 663/854 (77%)
Query: 54 RKFSAVLPPHIRCRLECMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 113
R A + P IR RLEC+
Sbjct: 75 RSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKL 134
Query: 114 XXXXEE-LSALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172
+ +S SSD+IILDVGGMTCGGC+ASVK+ILESQPQV+SASVNLTTETAIVWPV
Sbjct: 135 GANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVP 194
Query: 173 KAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLA 232
+AK +P+WQ+ LGE LA HLT+CGF+S+ RD+ T+NFFKVFETK +K+ RLKESGR LA
Sbjct: 195 EAKSVPDWQKSLGETLANHLTNCGFQSTPRDLVTENFFKVFETKTKDKQARLKESGRELA 254
Query: 233 VSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKG 292
VSWALCAVCLVGHL+H LG A WIH HSTGFH+SL L TLLGPG +L+LDG+KSL KG
Sbjct: 255 VSWALCAVCLVGHLTHFLGVNAPWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSLLKG 314
Query: 293 APNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATS 352
+PNMNTLVGLGA+SSF+VSSLAA++PKLGWK FFEEP+MLIAFVLLG+NLEQRAKIKATS
Sbjct: 315 SPNMNTLVGLGALSSFSVSSLAAMIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIKATS 374
Query: 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTV 412
DMTGLL +LPSKARLL+D D ++S +EVPCNSL VGD +V+LPGDR+PADGVV++GRST+
Sbjct: 375 DMTGLLSVLPSKARLLLDGDLQNSTVEVPCNSLSVGDLVVILPGDRVPADGVVKSGRSTI 434
Query: 413 DESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472
DESSFTGEPLPVTK S+VAAGSINLNGTLTVEV R GGETA+GDI+RLVEEAQSREAP
Sbjct: 435 DESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEAQSREAP 494
Query: 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVAC 532
VQ+L D+V+G FTYGV+ALSAATF FWNLFGAHVLP+A+ G P+SLALQLSCSVLVVAC
Sbjct: 495 VQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLALQLSCSVLVVAC 554
Query: 533 PCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVV 592
PCALGLATPTAMLV +ILEKF++V+TVVFDKTGTLT G PVVT+V+
Sbjct: 555 PCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPVVTEVI 614
Query: 593 TSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGT 652
N + N SE E+L AA VESNT HP+GKAIV+AA NCQ +K DGT
Sbjct: 615 IP-----ENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNCQTMKAEDGT 669
Query: 653 FIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAG 712
F EEPGSG VAI+ +++V+VGT++W++ HG ++ +E ++ NQS+VY+GVDN LA
Sbjct: 670 FTEEPGSGAVAIVNNKRVTVGTLEWVKRHGATGNSLLALEEHEINNQSVVYIGVDNTLAA 729
Query: 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK 772
+I ED++R+DAA VV +L+ QGI VYMLSGDK+N+A YVAS+VGI ++V++GVKP EK
Sbjct: 730 VIRFEDKVREDAAQVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERVIAGVKPAEK 789
Query: 773 KRFINELQNDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLL 832
K FINELQ ++ +VAMVGDGINDAAALASS++ LMGNRL+QLL
Sbjct: 790 KNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGAGAASEVSPVVLMGNRLTQLL 849
Query: 833 VALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVM 892
A+ELSR TMKTVKQNLWWAFGYNIVGIPIAAGVLLP+TGTMLTPS+AGALMG+SS+GVM
Sbjct: 850 DAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGALMGVSSLGVM 909
Query: 893 ANSLLLRLKFSSKQ 906
NSLLLR +F S +
Sbjct: 910 TNSLLLRYRFFSNR 923
|
|
| TAIR|locus:504956435 PAA2 "P-type ATPase of Arabidopsis 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 327/835 (39%), Positives = 475/835 (56%)
Query: 121 SALSSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNW 180
S S I+LDV GM CGGC A VK +L S +V+SA VN+ TETA V + +V +
Sbjct: 71 SITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADT 130
Query: 181 QRQLGEALA-------KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAV 233
L + L + ++ G +++ E + + RNR+ + +A
Sbjct: 131 AESLAKRLTESGFEAKRRVSGMGVAENVKKW--KEMVSKKEDLLVKSRNRVAFAWTLVA- 187
Query: 234 SWALCAVCLVGHLSHILGAKAS----WIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSL 289
LC H+ H LG + W + H++ L++ LLGPG +L+ DG+K+
Sbjct: 188 ---LCCGSHTSHILHSLGIHIAHGGIW-DLLHNSYVKGGLAVGALLGPGRELLFDGIKAF 243
Query: 290 FKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKA-FFEEPIMLIAFVLLGKNLEQRAKI 348
K +PNMN+LVGLG++++F++S ++ + P+L W A FF+EP+ML+ FVLLG++LE+RAK+
Sbjct: 244 GKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFVLLGRSLEERAKL 303
Query: 349 KATSDMTGLLGILPSKARLLV---DND-------AKDSI-IEVPCNSLHVGDHIVVLPGD 397
+A++DM LL ++ +++RL++ DN+ + DSI I V + + VGD ++VLPG+
Sbjct: 304 QASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDIRVGDSLLVLPGE 363
Query: 398 RIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMG 457
P DG V AGRS VDES TGE LPV K V+AG+IN +G L ++ G + +
Sbjct: 364 TFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRIKASSTGSNSTIS 423
Query: 458 DIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI--QYGG 515
IVR+VE+AQ APVQRLAD ++G F Y +++LSA TF FW G+H+ P + G
Sbjct: 424 KIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSHIFPDVLLNDIAG 483
Query: 516 P----VSLALQLSCSVLVVACPCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVN 571
P ++L+L+L+ VLVV+CPCALGLATPTA+L+ ++LE+ A ++
Sbjct: 484 PDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLASID 543
Query: 572 TVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIG 631
V DKTGTLT GRPVV+ V + G E E+LK AA VE HPI
Sbjct: 544 CVALDKTGTLTEGRPVVSGVASLG--------------YEEQEVLKMAAAVEKTATHPIA 589
Query: 632 KAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE- 690
KAIV AE N + + G + EPG GT+A I+ R V+VG+++W+ + + +
Sbjct: 590 KAIVNEAESLNLKTPETR-GQ-LTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDM 647
Query: 691 VEMEDLMNQSL-------------VYVGVDNM-LAGLIYVEDRIRDDAAHVVNSLSSQGI 736
V++E L++ L VYVG + + G I + D +R DA V L +GI
Sbjct: 648 VKLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGI 707
Query: 737 GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDA 796
+LSGD++ + VA VGI + + P +K FI+ LQ+ + VAMVGDGINDA
Sbjct: 708 KTVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDA 767
Query: 797 AALASSH--IXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFG 854
+LA + I L+ N+LS ++ AL L++ TM V QNL WA
Sbjct: 768 PSLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIA 827
Query: 855 YNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKAS 909
YN++ IPIAAGVLLP +TPS++G LM LSSI V++NSLLL+L S K S
Sbjct: 828 YNVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKNS 882
|
|
| UNIPROTKB|P74512 slr1950 "Cation-transporting ATPase E1-E2 ATPase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] | Back alignment and assigned GO terms |
|---|
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 303/784 (38%), Positives = 433/784 (55%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
+ LDVGGM C GC A+V+R L+ V+ + VNL T A+V K+ P +A
Sbjct: 26 LTLDVGGMKCAGCVAAVERQLDQLTGVTDSCVNLVTAVAVV-RYEPEKIQP-------QA 77
Query: 188 LAKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLS 247
+A+HL+ GF S +R G + EK R + GL ++ L + +GHLS
Sbjct: 78 IAEHLSQRGFPSQIRH-GHG----AIPATIGEKETR-ENVNWGLTIALVLLLLSGLGHLS 131
Query: 248 HILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSS 307
H G I FH FH SL+ + PG ++ LDG + L G NMNTLV LG S+
Sbjct: 132 HFGGPM---IPFFHHPIFHWSLATLAIAIPGREIFLDGWRGLRFGHANMNTLVALGTGSA 188
Query: 308 FTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARL 367
+ S +A P LGW+ FF+EP+ML+ +LLG+ LE +A+ KA S +T LL + PS ARL
Sbjct: 189 YLTSCIAWAWPGLGWECFFDEPVMLLGMLLLGRTLESKARQKAKSALTELLALQPSLARL 248
Query: 368 LV-DNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTK 426
+ D ++ IE+P + VG+ + VLPG++IP DG++ AG++ VDES TGE LPV K
Sbjct: 249 VGRGEDQGETGIEIPVEQVRVGEWVQVLPGEKIPVDGILVAGKTLVDESLLTGESLPVAK 308
Query: 427 IPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486
+ V AG+ N +G + + G ET + I++LVE AQ+++AP+QRLADQV+G F Y
Sbjct: 309 NVDDAVIAGAWNQSGAIIIAATHIGAETTLARIIQLVETAQTQKAPMQRLADQVAGWFAY 368
Query: 487 GVIALSAATFVFWNLFGAHVLPTAIQYGG--PVSLALQLSCSVLVVACPCALGLATPTAM 544
GV+A++ T FW + G + P + G P+ LAL+LS SVLVVACPCALGLATPTA+
Sbjct: 369 GVLAIALVTLGFWAMVGQSLFPEMVADTGLSPLLLALKLSVSVLVVACPCALGLATPTAI 428
Query: 545 LVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ 604
LV NILE + FDKTGTLT G +T V
Sbjct: 429 LVGTSLGAEQGILIKGGNILEILQRTTVMAFDKTGTLTQGNLQLTDAV------------ 476
Query: 605 NPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIE-EPGSGTVA 663
P+ ++ E+L AA VE T HP+ + ++ +A Q +++ IE E G G
Sbjct: 477 -PVADITGIELLTLAASVEQGTRHPLAQGLISSA-----QGLELLPVENIETEAGQGVQG 530
Query: 664 IIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--SLVYVGVDNMLAGLIYVEDRIR 721
+ ++ VG WL GV + ++ L++Q ++++V + L G + + D +R
Sbjct: 531 WYQGDRLLVGNQQWLMEQGVMGEPQWQTAVDQLLDQGKTVIFVARNQQLQGFLALRDTLR 590
Query: 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQ- 780
+A + L GI +L+GD A+ +A VGI ++ + + P K I +Q
Sbjct: 591 PEAKATIAQLKQWGIAPLLLTGDHPAIAQAIAMEVGI--EEFQAQMTPQAKVAKIKAMQG 648
Query: 781 -NDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSR 839
N +V+AMVGDGINDA ALA + + LM + LS +L AL LSR
Sbjct: 649 FNPVSVIAMVGDGINDAPALAQADVGISLSGATAVAMETADVVLMRSHLSDVLKALTLSR 708
Query: 840 LTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 899
T+ +KQNL WA GYN++ IP+AAG LP +LTP+IA A+M SSI V+ N+L LR
Sbjct: 709 STVAKIKQNLLWALGYNLLAIPLAAGAFLPSFAIVLTPAIAAAMMASSSIVVVLNALALR 768
Query: 900 LKFS 903
+FS
Sbjct: 769 YQFS 772
|
|
| TIGR_CMR|CHY_0940 CHY_0940 "copper-translocating P-type ATPase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 968 (345.8 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 256/797 (32%), Positives = 401/797 (50%)
Query: 132 VGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKH 191
V GM+C C V++ V A VNL + V KA E +
Sbjct: 80 VEGMSCAACVQKVEKAARGFAGVLDAVVNLPAQQLTV----KAY----------EGV--- 122
Query: 192 LTSCGFKSSLRDMGTDNF-FKVFETKMHEKRNRLKESGRG---LAVSWALCAVCLVGHLS 247
L K +R++G + F F+ + EK R KE + V W L + ++G +
Sbjct: 123 LDVGRLKREIRELGYEIFNFEEIDPLAREKEAREKEIRHQRLKMIVVWPLAILAMIGTMR 182
Query: 248 HILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSS 307
H+ K + F ++++ +L G++ + + L +G +MN L G S+
Sbjct: 183 HLWIFKYFVPEFLGNNYFLMAITTPVVLYGGYEFFVKSYQGLKRGVTDMNLLYATGIGSA 242
Query: 308 FTVSSLAALVPKLGW---KA-FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS 363
+ ++ + L P G+ KA FFE +L AF++LG+ LE + + + + L+ + P
Sbjct: 243 YLIAVINTLFPNAGFGGPKATFFESAALLTAFIILGRYLEALTRGRTSEALRKLISLKPK 302
Query: 364 KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLP 423
AR+L++ + K E+P + + +GD +VV PG+ IP DGVV G ++VDES TGE LP
Sbjct: 303 TARVLINGEEK----EIPADEVEIGDLVVVRPGETIPVDGVVERGTASVDESMLTGESLP 358
Query: 424 VTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483
V K S V GSI G LTV+ R G ET++ I++L+EEAQ+ +AP+Q+LAD V+G+
Sbjct: 359 VDKGEGSMVLGGSIIKTGALTVKATRVGKETSLSRIIKLMEEAQTTKAPLQKLADVVAGN 418
Query: 484 FTYGVIALSAATFVFWNLFG--AHVLPTAIQYGGPVSLA--------LQLSCSVLVVACP 533
F GV L+ TF FW +G A+ P P +A + +S +VLV++CP
Sbjct: 419 FILGVHILALVTFFFWFFYGYQAYFTPETRFLMSPAKIAEMGVFGFSMLISLTVLVISCP 478
Query: 534 CALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVT 593
CA+GLA P+A++ ++EK V + FDKTGT+T G P VT ++
Sbjct: 479 CAVGLAMPSAIMAGTGKGAEYGVLFKNAEVIEKMTKVKVIAFDKTGTITKGEPEVTDLI- 537
Query: 594 SGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTF 653
P ++E ++L+ A E + HP+ +AI++ N Q TF
Sbjct: 538 ------------PFE-INEQQLLELAGVAEKLSEHPLAQAIIKKYREIN-QKEPSEPATF 583
Query: 654 IEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--SLVYVGVDNMLA 711
PG G +A + G+ +L+ + VDTS E+ + L + +LVY D+ L
Sbjct: 584 HNIPGKGIMATYSGVNILAGSEKFLQENRVDTSLAGEIAKK-LKGEGKTLVYFAADHRLV 642
Query: 712 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771
G+I + D +++ +A + L +G ML+GD + +A +A VGI +V++GV P
Sbjct: 643 GVIALADTVKESSAKAIELLKKKGYIPVMLTGDNEVTARAIAQKVGI--SEVVAGVLPEG 700
Query: 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMGNRLSQL 831
K I Q +VAM GDGINDA AL + + ++ L +
Sbjct: 701 KVEAIKAYQEKGYMVAMAGDGINDAPALTQADVGIAMGTGTDIAKEAGEVVIVKGDLVDI 760
Query: 832 LVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGV 891
+ A++++R T VKQN +WAF YN +GIP AAGV P T +++P +A LM SS+ V
Sbjct: 761 VNAMDIARATFGKVKQNFFWAFVYNTLGIPFAAGVFYPWTKALVSPELAALLMAFSSVSV 820
Query: 892 MANSLLLRLKFSSKQKA 908
N+LLL+ +F KA
Sbjct: 821 TLNTLLLK-RFKPSGKA 836
|
|
| TIGR_CMR|SPO_0794 SPO_0794 "copper-translocating P-type ATPase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 582 (209.9 bits), Expect = 1.3e-99, Sum P(3) = 1.3e-99
Identities = 157/473 (33%), Positives = 241/473 (50%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
L V G++C C V+R L + P V A VNL T TA V V+ P ALA
Sbjct: 73 LTVEGLSCASCVGRVERALNAAPGVVEAQVNLATRTARVSYVT-GSTDP-------AALA 124
Query: 190 KHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHI 249
T+ G+ + D + + KR L LA+ AL V L+ H+
Sbjct: 125 AVSTAAGYAARPEGGAEDGGEEPSDEAAILKRQTL------LAILLAL-PVFLIEMGGHM 177
Query: 250 LGAKASWIH--VFHSTGFHLSLSLFTLL--GPGFQLILDGVKSLFKGAPNMNTLVGLGAV 305
+ A WI + T + + +L T+L GPG G +L +GAP+MN LV LG
Sbjct: 178 IPALHHWIMATIGQQTSYLIQFALTTVLLFGPGRVFYAKGFPALLRGAPDMNALVALGTG 237
Query: 306 SSFTVSSLAALVPKL---GW-KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGIL 361
+++ S +A P L G ++E +++A +LLG+ LE RA+ + + + L+G+
Sbjct: 238 AAYGFSLVATFAPGLLPAGTANVYYEAAAVIVALILLGRWLEARARGRTGAAIEALVGLQ 297
Query: 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEP 421
P AR+ + +EV + GD +++ PGDRIPAD V G+S VDES TGEP
Sbjct: 298 PRHARI----ERNGQPVEVEIADIQPGDTLLIRPGDRIPADARVLDGQSHVDESMITGEP 353
Query: 422 LPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
+PVTK + G++N G L + G +T + I+R+VE+AQ + P+Q + D+++
Sbjct: 354 VPVTKSAGDTLVGGTVNGAGALRARAEKVGADTVLAQIIRMVEQAQGAKLPIQSVVDRIT 413
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATP 541
F V+ ++A T + W FG P A+ + AL +VL++ACPCA+GLATP
Sbjct: 414 LWFVPIVMGVAALTVLVWLAFGPS--P-ALGH------ALVAGVAVLIIACPCAMGLATP 464
Query: 542 TAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 594
T+++V + L++ + FDKTGTLT+GRP +T + T+
Sbjct: 465 TSIMVGTGRAAELGVLFRKGDALQRLQEARVIAFDKTGTLTLGRPELTDLTTA 517
|
|
| TAIR|locus:2031361 HMA5 "heavy metal atpase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 910 (325.4 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 238/638 (37%), Positives = 344/638 (53%)
Query: 278 GFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSL----AALVPKLGWKAFFEEPIMLI 333
G++ K+L +G+ NM+ L+ LG +++ S AA P FFE MLI
Sbjct: 354 GWRFYTGSYKALRRGSANMDVLIALGTNAAYFYSLYTVLRAATSPDFKGVDFFETSAMLI 413
Query: 334 AFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSII---EVPCNSLHVGDH 390
+F++LGK LE AK K + + L+ + P A +L+ D + ++ E+ + D
Sbjct: 414 SFIILGKYLEVMAKGKTSQAIAKLMNLAPDTA-ILLSLDKEGNVTGEEEIDGRLIQKNDV 472
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRP 450
I ++PG ++ +DG V G+S V+ES TGE PV K V G++N NG L V+V R
Sbjct: 473 IKIVPGAKVASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIGGTLNENGVLHVKVTRV 532
Query: 451 GGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA-HVLPT 509
G E+A+ IVRLVE AQ +APVQ+LAD++S F VI LS +T++ W L G H P
Sbjct: 533 GSESALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTWLAWFLAGKLHWYPE 592
Query: 510 A-IQYG-GPVSLALQLSCSVLVVACPCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKF 567
+ I LALQ SV+V+ACPCALGLATPTA++V LE+
Sbjct: 593 SWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALERA 652
Query: 568 AMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTV 627
VN +VFDKTGTLT+G+PVV K L +N + E + A E N+
Sbjct: 653 HKVNCIVFDKTGTLTMGKPVVVKT----KLL-----KNMVL----REFYELVAATEVNSE 699
Query: 628 HPIGKAIVE-AAEFSNCQ-NVKVADGT-FIEEPGSGTVAIIEDRKVSVGTIDWLRSHGV- 683
HP+ KAIVE A +F + + N + F+ G G A ++ R++ VG + + H V
Sbjct: 700 HPLAKAIVEYAKKFRDDEENPAWPEACDFVSITGKGVKATVKGREIMVGNKNLMNDHKVI 759
Query: 684 --DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYML 741
D + + ED M Q+ + V +++ L G++ V D ++ A ++ L S I M+
Sbjct: 760 IPDDAEELLADSED-MAQTGILVSINSELIGVLSVSDPLKPSAREAISILKSMNIKSIMV 818
Query: 742 SGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALAS 801
+GD +A +A VGI D V++ KP +K + ELQ +VVAMVGDGIND+ AL +
Sbjct: 819 TGDNWGTANSIAREVGI--DSVIAEAKPEQKAEKVKELQAAGHVVAMVGDGINDSPALVA 876
Query: 802 SHIXXXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIP 861
+ + LM + L ++ A++LSR T ++ N WA GYN++GIP
Sbjct: 877 ADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLMGIP 936
Query: 862 IAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 899
IAAGVL P T L P IAGA M SS+ V+ SLLL+
Sbjct: 937 IAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCSLLLK 974
|
|
| POMBASE|SPBC29A3.01 ccc2 "copper transporting ATPase Ccc2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 855 (306.0 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 239/717 (33%), Positives = 369/717 (51%)
Query: 231 LAVSWALCAVCLVGHLSHILGAKASWI--HVFHSTGFH---LSLSLFTLLGPGFQLILDG 285
+++S++L + L +A+++ H F H L LSL G G
Sbjct: 175 ISISFSLAVMFLPQIFDSCDSMRAAFLVPHYFGICAGHIISLVLSLPVQFGVGRVYYSAA 234
Query: 286 VKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWK-----AFFEEPIMLIAFVLLGK 340
+L +G NM+ LV LG+ +F S ++ FF+ ML+ FV LG+
Sbjct: 235 YHALKRGTANMDVLVSLGSTVAFAASIFFMILYSARHADNPAPIFFDTADMLLTFVTLGR 294
Query: 341 NLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIP 400
LE +AK ++ ++ LL + PS A ++ DN+ IE+ + + GD I+V PG+ IP
Sbjct: 295 YLESKAKGSTSAALSQLLSLAPSSATIIEDNEQ----IEILADLIERGDLILVKPGEIIP 350
Query: 401 ADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIV 460
DG V G S VDESS +GEP+PV K + E+ +G+ N NG L V+ + E+ + IV
Sbjct: 351 VDGTVVEGSSYVDESSVSGEPVPVHKTIDDELLSGTANGNGRLLVKATKSPRESQLAVIV 410
Query: 461 RLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV--- 517
LV+ AQ AP+Q+ AD+V+G F ++ALS +TF FW LF + + P+
Sbjct: 411 DLVQRAQISHAPIQQFADRVAGIFVPVIVALSISTFTFWFLFTKYSSKYPSVFDDPMGKF 470
Query: 518 SLALQLSCSVLVVACPCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDK 577
++ L+L+ SV+VVACPCALGL+TPTA++V ILE+ V+TVVFDK
Sbjct: 471 AVCLKLTISVVVVACPCALGLSTPTAVMVGTGVGALNGIIIKGGEILERLNQVDTVVFDK 530
Query: 578 TGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVE- 636
TGTLT+G+ VT + S+ D N ++ + + + F ES++ HPIGKAI E
Sbjct: 531 TGTLTVGKLSVTDI----SIVD-NLEE--LLDIPKNIFWAFVKASESSSEHPIGKAITEK 583
Query: 637 AAEFSNCQNVKVADGTFIEEPGSGTVAII--EDRKVS--VGTIDWLRSHGVDT-STFQ-E 690
A+EF++ + + +F PG G ++ ++R +G L + V F +
Sbjct: 584 ASEFTDVSEIGIE--SFNAVPGEGVDVVLRWKERTFHALLGNSLLLEHNNVSIPDDFDSK 641
Query: 691 VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 750
+++ + V + +D G + D++R D+ V++L G V +L+GD+K +A
Sbjct: 642 LKLSSSSGLTCVRIAIDGQFVGFLGCMDQVRPDSYQTVSALKQLGKKVCLLTGDQKATAR 701
Query: 751 YVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIXXXXXX 810
VA + I V + P++K I +L++ ++ VAMVGDGIND+ +L + +
Sbjct: 702 RVAQGLEIDFSDVYAEAVPSQKAEIIQKLKDQKHCVAMVGDGINDSPSLVLADVGIAPIN 761
Query: 811 XXXXXXXXXXXXLMGNR-LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLP 869
L+ L V+ +LSR+ +K +K NL WA YN V IPIA G LP
Sbjct: 762 GSGIALESADVILVRKGVLLDTAVSFDLSRVIVKRIKMNLVWACIYNFVMIPIAMGFFLP 821
Query: 870 VTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 926
G L P A A M SS+ V+A+SLLLR K +A S+ +S L
Sbjct: 822 -WGIYLNPMWASAAMMFSSLSVLASSLLLRRWKKPKSLIFSEADDVETESSTNSSVL 877
|
|
| TIGR_CMR|DET_0953 DET_0953 "copper-translocating P-type ATPase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 9.5e-91, Sum P(3) = 9.5e-91
Identities = 130/339 (38%), Positives = 198/339 (58%)
Query: 295 NMNTLVGLGAVSSFTVSSLAALV-------PKLGWKAFFEEPIMLIAFVLLGKNLEQRAK 347
+MNTL+ LG +++ + SL ALV P L +F+ M+IA +L G+ LE RAK
Sbjct: 223 DMNTLIALGTSAAY-LYSLTALVFPSIFDSPLLEKHLYFDTSAMIIALILTGRFLEARAK 281
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
+ + + L+G+ PS A ++ D K+ ++ + + + GD IV+ PG+R+P DG++
Sbjct: 282 GRTSDAIRRLVGLQPSTASII--RDGKEILVGI--SEVVAGDKIVIRPGERLPVDGLILE 337
Query: 408 GRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467
G S++DES TGE +P K V G+ N G T E ++ G +TA+ I+RLVEEAQ
Sbjct: 338 GYSSLDESMVTGESIPAEKKAGDYVIGGTFNQTGAFTYEAQKVGADTALARIIRLVEEAQ 397
Query: 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSV 527
+AP+QRLAD+++ F VI+++ TFVFW +FG P+ Y AL + +V
Sbjct: 398 GSKAPIQRLADKIASVFVPAVISIAILTFVFWLVFGPE--PS-FTYA-----ALNM-IAV 448
Query: 528 LVVACPCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPV 587
LV+ACPCALGLATPTA++V LEK ++T+V DKTGTLT G+PV
Sbjct: 449 LVIACPCALGLATPTALIVGMGKGAENGILIRSAVALEKMHKLDTIVLDKTGTLTRGKPV 508
Query: 588 VTKVVTSGSLTDP------NSKQNPIHPLSETEILKFAA 620
++ +V+ D +++Q HPL++ ++K AA
Sbjct: 509 LSNLVSHTMDKDSFLTLVASAEQFSEHPLAKA-VVKEAA 546
|
|
| TAIR|locus:2156354 RAN1 "RESPONSIVE-TO-ANTAGONIST 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 831 (297.6 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 232/634 (36%), Positives = 337/634 (53%)
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKL-G-WK-AFFEEPIMLIAFVLLGKNLE 343
++L G+ NM+ LV LG +S+ S A L + G W +F+ MLI FVLLGK LE
Sbjct: 361 RALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLLGKYLE 420
Query: 344 QRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHV--GDHIVVLPGDRIPA 401
AK K + M L+ + P+ A LL + + E ++L + GD + V PG +IPA
Sbjct: 421 SLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPGAKIPA 480
Query: 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVR 461
DGVV G S V+ES TGE +PV+K +S V G+IN++G L ++ + G + + I+
Sbjct: 481 DGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVLSQIIS 540
Query: 462 LVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA-HVLPTAI--QYGGPVS 518
LVE AQ +AP+Q+ AD V+ F VI L+ T V W++ GA P + G
Sbjct: 541 LVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPENGTHFV 600
Query: 519 LALQLSCSVLVVACPCALGLATPTAMLVXXXXXXXXXXXXXXXNILEKFAMVNTVVFDKT 578
+L S SV+V+ACPCALGLATPTA++V + LEK V V+FDKT
Sbjct: 601 FSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYVIFDKT 660
Query: 579 GTLTIGRPVVT--KVVTS---GS-LT-DPNSKQNPIHPLSETEILKFAAGVESNTVHPIG 631
GTLT G+ VT KV + G LT +++ + HPL++ I+ +A H
Sbjct: 661 GTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKA-IVAYA-----RHFHFFD 714
Query: 632 KAIVEAAEFSN--CQNVK-VADGT-FIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST 687
++ E E +N QN + D + F PG G ++ ++ + VG + + ++
Sbjct: 715 ES-TEDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPD 773
Query: 688 FQEVEMEDL--MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK 745
E +EDL ++ V V + L G++ + D ++ +AA VV L G+ M++GD
Sbjct: 774 HVEKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDN 833
Query: 746 KNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIX 805
+A VA VGI + V + V P K I LQ D + VAMVGDGIND+ ALA++ +
Sbjct: 834 WRTARAVAKEVGI--EDVRAEVMPAGKADVIRSLQKDGSTVAMVGDGINDSPALAAADVG 891
Query: 806 XXXXXXXXXXXXXXXXXLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAG 865
LM N L ++ A++LSR T+ ++ N +A YN+V IPIAAG
Sbjct: 892 MAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTLTRIRLNYVFAMAYNVVSIPIAAG 951
Query: 866 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 899
V PV L P AGA M LSS+ V+ +SLLLR
Sbjct: 952 VFFPVLRVQLPPWAAGACMALSSVSVVCSSLLLR 985
|
|
| ASPGD|ASPL0000011958 ygA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 779 (279.3 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 200/545 (36%), Positives = 291/545 (53%)
Query: 380 VPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINL 439
+P + VGD +V+ PGD++PADGVV G + VDES TGE LP+ K S V AG++N
Sbjct: 564 IPTELIEVGDIVVLHPGDKVPADGVVIRGETYVDESMITGEALPIHKAKGSLVIAGTVNG 623
Query: 440 NGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFW 499
+ ++V R G +T + IV+LV++AQ+ A +QR+AD V+G+F +I+L TF W
Sbjct: 624 TSAVDIKVIRTGKDTQLSKIVKLVQDAQTSRASIQRMADIVAGYFVPSIISLGLVTFFGW 683
Query: 500 NLFGAHVLP------TAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVXXXXXXX 553
+F +H+LP + GG V + L+L SV+V ACPCALGL+TPTA++V
Sbjct: 684 -MFVSHLLPHPPKIFVTKEGGGKVMVCLKLCISVIVFACPCALGLSTPTAVMVGTGVGAT 742
Query: 554 XXXXXXXXNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSET 613
+LE + VV+DKTGTLT G+ VT+ + +P+ +
Sbjct: 743 QGILVKGGAVLEAATKITHVVYDKTGTLTTGQMSVTE-----ARIEPHWSSSDWRRRLWW 797
Query: 614 EILKFAAGVESNTVHPIGKAIVEAA--EFSNCQNVKVAD--GTFIEEPGSGTVAIIE--- 666
I+ A E N+ HPIGKAI AA E N + G F G G A++E
Sbjct: 798 LIVGLA---EMNSEHPIGKAIHLAAKSESGNSGEGGLPGSLGDFEARIGKGIAALVEPAS 854
Query: 667 --DR---KVSVGTIDWLRSHGVDTSTFQEV--EMEDLMNQSL----VYVGVDNMLAGLIY 715
+R +V +G +L+SH V E + N + ++V +D AG I
Sbjct: 855 GVERVRYRVLIGNAAFLQSHSVAVPESAETTPDASGYKNSRVGITQIHVAIDGHFAGTIA 914
Query: 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRF 775
++D ++ A V +L GI +++GD + +A +AS VGI + V + V P++K+
Sbjct: 915 LQDTVKVTAVAAVAALHRMGISTSLITGDSRAAAISIASAVGIAPEAVHASVSPSDKQSI 974
Query: 776 INELQNDENVVAMVGDGINDAAALASSHIXXXXXXXXXXXXXXXXXXLMG-NRLSQLLVA 834
I LQ + VAMVGDGIND+ ALA++ + LM + L + +
Sbjct: 975 IASLQETGDRVAMVGDGINDSPALATASVGIALASGTDVAMEAADIVLMRPDDLLSVPAS 1034
Query: 835 LELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMAN 894
L LSR +K NL WA GYNI+G+P A G+ LP G ML P AGA M LSS+ V+ +
Sbjct: 1035 LALSRSVFNRIKLNLVWACGYNIIGLPFAMGLFLPFGGFMLPPMAAGAAMALSSVSVVVS 1094
Query: 895 SLLLR 899
SLLL+
Sbjct: 1095 SLLLK 1099
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SZC9 | HMA6_ARATH | 3, ., 6, ., 3, ., n, 1 | 0.6720 | 0.9667 | 0.9494 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.III.2222.1 | heavy metal ATPase (865 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 932 | |||
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.0 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-178 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-128 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-112 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-92 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-91 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-55 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-51 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-38 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-36 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-32 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-28 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 9e-28 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-23 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 6e-19 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 6e-14 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-12 | |
| cd00371 | 63 | cd00371, HMA, Heavy-metal-associated domain (HMA) | 3e-12 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-11 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-10 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-10 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-10 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 7e-09 | |
| pfam00403 | 62 | pfam00403, HMA, Heavy-metal-associated domain | 2e-08 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 7e-07 | |
| COG2608 | 71 | COG2608, CopZ, Copper chaperone [Inorganic ion tra | 3e-06 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-06 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-05 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-05 | |
| PLN03138 | 796 | PLN03138, PLN03138, Protein TOC75; Provisional | 3e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-05 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 2e-04 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-04 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 3e-04 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 5e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 6e-04 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 7e-04 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 0.001 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.001 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.002 | |
| PRK13748 | 561 | PRK13748, PRK13748, putative mercuric reductase; P | 0.002 | |
| pfam07172 | 91 | pfam07172, GRP, Glycine rich protein family | 0.002 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 0.004 | |
| COG2179 | 175 | COG2179, COG2179, Predicted hydrolase of the HAD s | 0.004 | |
| PHA00370 | 297 | PHA00370, III, attachment protein | 0.004 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 683 bits (1766), Expect = 0.0
Identities = 308/775 (39%), Positives = 424/775 (54%), Gaps = 71/775 (9%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETA-IVWPVSKAKVIPNWQRQLGEAL 188
L V GMTC CA+ ++ L P V A VNL TE A +V+ + L +
Sbjct: 6 LSVEGMTCAACASRIEA-LNKLPGVEEARVNLATERATVVYDPEEV--------DLPADI 56
Query: 189 AKHLTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSH 248
+ G+ + L D + L+E R L ++ L L+ L
Sbjct: 57 VAAVEKAGYSARLTAALAD--------PAEAEARLLRELLRRLIIAGLLTLPLLLLSLGL 108
Query: 249 ILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSF 308
+LGA L+ L G+ ++L +G NM+TLV L + ++
Sbjct: 109 LLGAFLLPW-------VSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAY 161
Query: 309 TVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLL 368
S A L P +FEE MLI LLG+ LE RAK +A + LL + P A ++
Sbjct: 162 AYSLYATLFP-----VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVV 216
Query: 369 VDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIP 428
+ EVP + VGD ++V PG+RIP DGVV +G S+VDES TGE LPV K P
Sbjct: 217 RGDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKP 273
Query: 429 ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGV 488
EV AG++NL+G+LT+ V R G +T + I+RLVEEAQS +AP+QRLAD+V+ +F V
Sbjct: 274 GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333
Query: 489 IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGT 548
+ ++A TF W LFG GG AL + +VLV+ACPCALGLATPTA+LVG
Sbjct: 334 LVIAALTFALWPLFG----------GGDWETALYRALAVLVIACPCALGLATPTAILVGI 383
Query: 549 SLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIH 608
A RG+L++GG LE+ A V+TVVFDKTGTLT G+P VT VV
Sbjct: 384 GRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------------ 431
Query: 609 PLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDR 668
E E+L AA +E ++ HP+ KAIV+AA +V+ F E PG G A ++
Sbjct: 432 --DEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVE----DFEEIPGRGVEAEVDGE 485
Query: 669 KVSVGTIDWLRSHGVDTSTFQE-VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHV 727
+V VG L G+D E +E + +++V+V VD L G+I + D +R DA
Sbjct: 486 RVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEA 545
Query: 728 VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVA 787
+ +L + GI V ML+GD + +AE +A +GI D+V + + P +K + ELQ + VA
Sbjct: 546 IAALKALGIKVVMLTGDNRRTAEAIAKELGI--DEVRAELLPEDKAEIVRELQAEGRKVA 603
Query: 788 MVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQ 847
MVGDGINDA ALA++ +G+AMG G A E A VVLM + LS + A++LSR T + +KQ
Sbjct: 604 MVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQ 663
Query: 848 NLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKF 902
NL+WAFGYN + IP+AAG L LTP IA M SS+ V+ N+L L F
Sbjct: 664 NLFWAFGYNAIAIPLAAGGL-------LTPWIAALAMSGSSVLVVLNALRLLRSF 711
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 556 bits (1435), Expect = 0.0
Identities = 247/599 (41%), Positives = 348/599 (58%), Gaps = 42/599 (7%)
Query: 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALV-----PKLGWKAFFEEPIMLIAFVLLGKN 341
K+L PNM+TL+ LG ++ SL AL+ L FF+ MLI F+LLG+
Sbjct: 11 KALRHKTPNMDTLIALGTTVAY-GYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRW 69
Query: 342 LEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPA 401
LE AK +A+ ++ L + PS A LL D+ I EVP L GD + VLPG++IP
Sbjct: 70 LEMLAKGRASDALSKLAKLQPSTATLLTDDG---EIEEVPVELLQPGDIVRVLPGEKIPV 126
Query: 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVR 461
DG V G S VDES TGE LPV K V AG++N G+L V G +T + IVR
Sbjct: 127 DGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVR 186
Query: 462 LVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLAL 521
LV +AQ +AP+QRLAD+V+G+F VIA++ TFV W + GA + AL
Sbjct: 187 LVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV-----------FAL 235
Query: 522 QLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTL 581
+++ +VL++ACPCALGLATPT + V T L A G+L++ G+ LE+ A ++TVVFDKTGTL
Sbjct: 236 EVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTL 295
Query: 582 TIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS 641
T G+P VT V E+L AA +E+ + HP+ KAIV A+
Sbjct: 296 TQGKPTVTDVH-------------VFGESDRDELLALAAALEAGSEHPLAKAIVSYAKAK 342
Query: 642 NCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSL 701
+V+D F PG G +E + +G L +G+ T E +
Sbjct: 343 GITLSQVSD--FKAIPGIGVEGTVEGHTIQLGNEKLLGENGLKTDGEVEEG----GGTTS 396
Query: 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 761
V V V+ LAG++ + D+++ +A V+ +L +GI ML+GD + +A+ VA +GI +
Sbjct: 397 VLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI--E 454
Query: 762 KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASV 821
V + V P++K I +LQ VVAMVGDGINDA ALA + +G+A+G G A E A V
Sbjct: 455 NVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADV 514
Query: 822 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 880
VL+ N L+ + A++LSR T++ +KQNL WAFGYN++ IPIAAGVL P +L+P++A
Sbjct: 515 VLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGI-LLSPAVA 572
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 528 bits (1362), Expect = e-178
Identities = 247/606 (40%), Positives = 358/606 (59%), Gaps = 53/606 (8%)
Query: 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355
M+ L+ L ++++ + E +L+ LLG+ LE+RAK +A+ ++
Sbjct: 1 MDLLMALATIAAYAMG-------------LVLEGALLLFLFLLGETLEERAKGRASDALS 47
Query: 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDES 415
LL + PS AR+L + S EVP L VGD ++V PG+RIP DGVV +G S VDES
Sbjct: 48 ALLALAPSTARVLQGDG---SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDES 104
Query: 416 SFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQR 475
+ TGE +PV K EV AG+IN +G+LT+ V + G ++ + IV LVEEAQS +AP+QR
Sbjct: 105 ALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQR 164
Query: 476 LADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCA 535
LAD+++ ++ V+A++ TFV W GA AL + +VLVVACPCA
Sbjct: 165 LADRIASYYVPAVLAIALLTFVVWLALGAL-------------GALYRALAVLVVACPCA 211
Query: 536 LGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSG 595
LGLATP A+LV + A RG+L++GG+ LEK A V TVVFDKTGTLT G+P V +
Sbjct: 212 LGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDIEP-- 269
Query: 596 SLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIE 655
L D +SE E+L AA +E ++ HP+ +AIV A+ + K D E
Sbjct: 270 -LDD--------ASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPKQED--VEE 318
Query: 656 EPGSGTVAIIE-DRKVSVGTIDWLRSHGVDTSTFQEVEMED-LMNQSLVYVGVDNMLAGL 713
PG G A ++ +V +G +L S ++ E +++V+V VD L G+
Sbjct: 319 VPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGV 378
Query: 714 IYVEDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK 772
I + D++R +A + +L + GI + ML+GD +++AE VA+ +GI D+V + + P +K
Sbjct: 379 IALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--DEVHAELLPEDK 436
Query: 773 KRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 832
+ ELQ + VVAMVGDGINDA ALA++ +G+AMG G A E A +VL+ + LS L
Sbjct: 437 LAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLP 496
Query: 833 VALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVM 892
A++LSR T + +KQNL WA GYN+V IP+AAG LLP+ +A L S++ V+
Sbjct: 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPL------WLLAVLLHEGSTVLVV 550
Query: 893 ANSLLL 898
NSL L
Sbjct: 551 LNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-128
Identities = 206/575 (35%), Positives = 299/575 (52%), Gaps = 60/575 (10%)
Query: 328 EPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHV 387
E +L+ +G+ LE+ A +A + L+ + P AR+L S+ EV L V
Sbjct: 20 EGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRG----GSLEEVAVEELKV 75
Query: 388 GDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEV 447
GD +VV PG+R+P DGVV +G STVDES+ TGE +PV K P EV AG+INL+G LT+ V
Sbjct: 76 GDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVV 135
Query: 448 RRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVL 507
+ ++ + IV LVEEAQSR+A QR D+ + ++T V+A++ A ++ L
Sbjct: 136 TKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRW-- 193
Query: 508 PTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKF 567
+ + +LVVA PCAL ++ P A L S A G+L++GG LE
Sbjct: 194 ----------PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEAL 243
Query: 568 AMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTV 627
A + TV FDKTGTLT GRP V VV E+L+ AA E +
Sbjct: 244 AKIKTVAFDKTGTLTTGRPKVVDVVP-------------------AEVLRLAAAAEQASS 284
Query: 628 HPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST 687
HP+ +AIV+ A + + E PG G A+++ +V +G L +
Sbjct: 285 HPLARAIVDYAR------KRENVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGARPE 338
Query: 688 FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIG-VYMLSGDKK 746
+++V+V D G I + D R DAA + L + GI V ML+GD++
Sbjct: 339 SA--------GKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRR 390
Query: 747 NSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGV 806
AE VA +GI D+V + + P +K + EL+ VAMVGDGINDA ALA++ +G+
Sbjct: 391 AVAERVARELGI--DEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGI 448
Query: 807 AMGG-GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAG 865
AMG G A E A VVL+ + LS+L A+ L+R T + VKQN+ I I
Sbjct: 449 AMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV--VIALGI----ILLL 502
Query: 866 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRL 900
+LL + G +L +A S++ V+ N+L L
Sbjct: 503 ILLALFG-VLPLWLAVLGHEGSTVLVILNALRLLR 536
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-112
Identities = 220/626 (35%), Positives = 330/626 (52%), Gaps = 48/626 (7%)
Query: 287 KSLFKGAPNMNTLVGLGA----VSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNL 342
KSL G+ M+TLV LG + S +V+ P ++E M+I + LG L
Sbjct: 243 KSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302
Query: 343 EQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402
E RA+ +++ + LL + P AR++ D K VP + G + + GDR+P D
Sbjct: 303 EARARQRSSKALEKLLDLTPPTARVVTDEGEK----SVPLADVQPGMLLRLTTGDRVPVD 358
Query: 403 GVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRL 462
G + G + +DE+ TGEP+P K V AG++ +G++ G T + I+R+
Sbjct: 359 GEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRM 418
Query: 463 VEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQ 522
V +AQS + + +LAD++S F V+ ++ + W FG A Q + L
Sbjct: 419 VRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP-----APQ----IVYTLV 469
Query: 523 LSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLT 582
++ +VL++ACPCALGLATP +++ G A G+L+R + L++ + ++T+VFDKTGTLT
Sbjct: 470 IATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLT 529
Query: 583 IGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSN 642
G+P V V T + E + L+ AA +E + HP+ +AI++ A
Sbjct: 530 EGKPQVVAVKTFNGVD-------------EAQALRLAAALEQGSSHPLARAILDKAGDMT 576
Query: 643 CQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--- 699
V F G G E + +G L VDT +E +
Sbjct: 577 LPQVN----GFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTK-----ALEAEITAQAS 627
Query: 700 ---SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 756
+ V + VD A L+ + D +R D+ + L G + ML+GD +A +A
Sbjct: 628 QGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA 687
Query: 757 GIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816
GI D+V++GV P+ K I LQ+ VAMVGDGINDA ALA + +G+AMGGG A
Sbjct: 688 GI--DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAI 745
Query: 817 EVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLT 876
E A++ LM + L + AL +SR T++ +KQNL AF YN +GIPIAAG+L P TGT+L
Sbjct: 746 ETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLN 805
Query: 877 PSIAGALMGLSSIGVMANS-LLLRLK 901
P +AGA M LSSI V++N+ LLR K
Sbjct: 806 PVVAGAAMALSSITVVSNANRLLRFK 831
|
Length = 834 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = 1e-92
Identities = 152/579 (26%), Positives = 254/579 (43%), Gaps = 66/579 (11%)
Query: 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDH 390
++ VL+ L + K+KA + L L + V + E+P L GD
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRN---GWKEIPAKDLVPGDV 57
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESE----------VAAGSINLN 440
++V G+ +PADGV+ +G VDES+ TGE PV K E V AG+
Sbjct: 58 VLVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFG 117
Query: 441 GTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH-FTYGVIALSAATFVFW 499
GTL V V G T +G I +V+ P+Q D++ F ++ L+ A F++
Sbjct: 118 GTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYL 177
Query: 500 NLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLR 559
+ G + AL + VLV+ P AL A A+ VG + A +G+L+R
Sbjct: 178 FIRGWD--------PNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVR 229
Query: 560 GGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA 619
N LE+ V+ + DKTGTLT + + V G K++ L A
Sbjct: 230 NLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG------GKEDNSSSLV-------A 276
Query: 620 AGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFI-------EEPGSGTVAIIEDRK--- 669
+ P+ KA++++AE + + + + D
Sbjct: 277 CDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLL 336
Query: 670 VSVGTIDWLRSHGVDTSTFQEVEMEDLMNQS---LVYVGVDNM-----LAGLIYVEDRIR 721
G +++ + E + + ++ + GLI ED +R
Sbjct: 337 FVKGAPEFILERCNNYE-----EKYLELARQGLRVLAFASKELEDDLEFLGLITFEDPLR 391
Query: 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQN 781
DA + L + GI V M++GD +A+ +A +GI V + V P +K + + LQ
Sbjct: 392 PDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI---DVFARVSPEQKLQIVEALQK 448
Query: 782 DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLT 841
++VAM GDG+NDA AL + +G+AMG A A +VL+ + LS ++ A++ R
Sbjct: 449 KGHIVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDDLSAIVKAVKEGRKI 503
Query: 842 MKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 880
+K N++WA YN++ IP+A +++ + + ++A
Sbjct: 504 FSNIKSNIFWAIAYNLILIPLALLLIVIILLLPMLAALA 542
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 305 bits (784), Expect = 2e-91
Identities = 229/789 (29%), Positives = 360/789 (45%), Gaps = 126/789 (15%)
Query: 132 VGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKH 191
V GM C CA V+ + V+ V TE K++ + + +
Sbjct: 59 VSGMDCPSCARKVENAVRQLAGVNQVQVLFATE----------KLVVDADNDIRAQVESA 108
Query: 192 LTSCGFKSSLRDMGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILG 251
+ GF SLRD + E+ + ++ + + +H G
Sbjct: 109 VQKAGF--SLRDEQA--------AAAAPESRLKSENLPLITLAVMMAISWGLEQFNHPFG 158
Query: 252 AKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVS 311
A F +T + L+ + +LI G S F + TL+ +V+
Sbjct: 159 QLA-----FIATTL---VGLYPIARKALRLIRSG--SPFA----IETLM--------SVA 196
Query: 312 SLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDN 371
++ AL +G A E M++ L+G+ LE A +A ++ L+ ++P A L D
Sbjct: 197 AIGALF--IGATA---EAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDG 251
Query: 372 DAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESE 431
+ + EV L GD I V G R+PADG + + ++ DES+ TGE +PV + +
Sbjct: 252 ERE----EVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEK 307
Query: 432 VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIAL 491
V AG+ +++ +T+EV G +A+ I+ L+EEA+ R AP++R D+ S +T ++ +
Sbjct: 308 VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLV 367
Query: 492 SAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLG 551
+ + L A I Y G L L L++ CPCAL ++TP A+ G +
Sbjct: 368 ALLVILVPPLLFAAPWQEWI-YRG---LTL------LLIGCPCALVISTPAAITSGLAAA 417
Query: 552 ATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLS 611
A RG L++GG LE+ V TV FDKTGTLT G+P VT + P +S
Sbjct: 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIH-------------PATGIS 464
Query: 612 ETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVS 671
E+E+L AA VE + HP+ +AIV A+ + + GSG + +V
Sbjct: 465 ESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRAL--AGSGIEGQVNGERVL 522
Query: 672 VGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSL 731
+ + + + ++ + +++V V ++ + GLI ++D +R DA ++ L
Sbjct: 523 ICAPG--KLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL 580
Query: 732 SSQGIGVYMLSGDKKNSAEYVASLVGI-------PKDKVLSGVKPNEKKRFINELQNDEN 784
+ GI ML+GD +A +A +GI P+DKV + + EL N
Sbjct: 581 KALGIKGVMLTGDNPRAAAAIAGELGIDFRAGLLPEDKV----------KAVTEL-NQHA 629
Query: 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 844
+AMVGDGINDA A+ ++ IG+AMG G A E A L NRL L +ELSR T
Sbjct: 630 PLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHAN 689
Query: 845 VKQNLWWAFGYNIVGIPIAAGV--------LLPVTG---TMLTPSIAGALMGLSSIGVMA 893
++QN I IA G+ LL +TG +L S A AL V A
Sbjct: 690 IRQN-----------ITIALGLKAIFLVTTLLGITGLWLAVLADSGATAL-------VTA 731
Query: 894 NSL-LLRLK 901
N+L LLR +
Sbjct: 732 NALRLLRKR 740
|
Length = 741 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 7e-55
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 14/236 (5%)
Query: 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDH 390
+++ VL+ LE + +A + L +LP A ++ + E+P + L VGD
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDG---KEEEIPADELVVGDI 57
Query: 391 IVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRP 450
+++ PGDR+PADG + G VDES+ TGE LPV K V AG++ L+G L V V
Sbjct: 58 VLLKPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTAT 117
Query: 451 GGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTA 510
G +T +G I RLVEEA+S + P+QRL D+++ V+AL+ F+ W
Sbjct: 118 GEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIW----------- 166
Query: 511 IQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEK 566
GG AL + +VLV ACP AL LA P A+ VG A +G+L++ + LE
Sbjct: 167 FFRGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 4e-51
Identities = 156/689 (22%), Positives = 260/689 (37%), Gaps = 140/689 (20%)
Query: 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPI----MLIAFVLLGKNLEQRAKIKAT 351
L+ + A+ S V W + I +++ LLG E +A
Sbjct: 82 FIILLLVAALLSAFVGD---------WVDAGVDAIVILLVVVINALLGFVQE----YRAE 128
Query: 352 SDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST 411
+ L + KA++L D +E+P + L GD +++ GD +PAD +
Sbjct: 129 KALEALKKMSSPKAKVLRDGK----FVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184
Query: 412 -VDESSFTGEPLPVTKIPESEVA--------------AGSINLNGTLTVEVRRPGGETAM 456
VDES+ TGE LPV K +G+ ++G V G ET
Sbjct: 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEF 244
Query: 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGP 516
G I RL+ + + P+QR +++ + L A FV LF
Sbjct: 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVV-GLFRGGN---------G 294
Query: 517 VSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFD 576
+ + + ++ V A P L A+ +G A ++R N +E V+ + D
Sbjct: 295 LLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSD 354
Query: 577 KTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN----------T 626
KTGTLT + V K+ +G D + K P +L AA + ++
Sbjct: 355 KTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLL--AAALCNSVTPEKNGWYQA 412
Query: 627 VHPIGKAIVEAAEFSNC--------QNVKVAD-----------GTFIEEPGSGTVAI--- 664
P A+VE AE + ++ +
Sbjct: 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKG 472
Query: 665 ----IEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSL------------------- 701
I +R S+G ++ L T +E +++L ++ L
Sbjct: 473 APEVILERCKSIGELEPLTE--EGLRTLEEA-VKELASEGLRVLAVAYKKLDRAEKDDEV 529
Query: 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 761
+ D + GL +ED R+D + L GI V+M++GD +A +A GI +
Sbjct: 530 DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAE 589
Query: 762 ----KVLSG-----------------------VKPNEKKRFINELQNDENVVAMVGDGIN 794
V+ G V P +K R + LQ +VVAM GDG+N
Sbjct: 590 AESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVN 649
Query: 795 DAAALASSHIGVAMGG-GVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAF 853
DA AL ++ +G+AMGG G AA E A +VL+ + + +++A+ R +K+ + +
Sbjct: 650 DAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLL 709
Query: 854 GYNIVGI------PIAAGVLLPVTGTMLT 876
N+ + + LP+T L
Sbjct: 710 SKNVGEVLTLLIYSLFNLFFLPLTPLQLL 738
|
Length = 917 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 9e-38
Identities = 141/497 (28%), Positives = 232/497 (46%), Gaps = 51/497 (10%)
Query: 365 ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPV 424
A+LL D+ +I +VP + L GD ++V GD IP DG V G ++VDES+ TGE PV
Sbjct: 107 AKLLRDDG---AIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVASVDESAITGESAPV 163
Query: 425 TKIPESEVAA---GSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481
K + A+ G+ L+ L VE GET + ++ LVE AQ R+ P +
Sbjct: 164 IKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALT--- 220
Query: 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATP 541
I L A T VF L L YGG ++++ + ++LV P +G
Sbjct: 221 -------ILLIALTLVF--LLVTATLWPFAAYGG-NAISVTVLVALLVCLIPTTIGGLLS 270
Query: 542 TAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN 601
+ G ++ G +E V+T++ DKTGT+T+G + ++ +
Sbjct: 271 AIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--------- 321
Query: 602 SKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIVEAAEFSNCQ--NVKVADGTFIEEP 657
P + E + A A + +T P GK+IV A+ + +V+ TF+E
Sbjct: 322 ----PAQGVDEKTLADAAQLASLADDT--PEGKSIVILAKQLGIREDDVQSLHATFVEFT 375
Query: 658 G----SGTVAIIEDRKVSVGTIDWLRSH-----GVDTSTF-QEVEMEDLMNQSLVYVGVD 707
SG + R + G +D ++ H G + Q V+ + + V D
Sbjct: 376 AQTRMSGI-NLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCED 434
Query: 708 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV 767
N + G+IY++D ++ L GI M++GD + +A +A+ G+ D ++
Sbjct: 435 NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--DDFIAEA 492
Query: 768 KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827
P +K I + Q + +VAM GDG NDA ALA + +GVAM G AA E A++V + +
Sbjct: 493 TPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSD 552
Query: 828 LSQLLVALELSRLTMKT 844
++L+ + + + + T
Sbjct: 553 PTKLIEVVHIGKQLLIT 569
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 1e-36
Identities = 132/483 (27%), Positives = 218/483 (45%), Gaps = 61/483 (12%)
Query: 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPL 422
+ ARLL + SI VP L GD ++V G+ IP+DG V G ++VDES+ TGE
Sbjct: 104 TIARLLRADG---SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESA 160
Query: 423 PVTKIP---ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
PV + S V G+ L+ L + + GET + ++ LVE A+ ++ P +
Sbjct: 161 PVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNE----- 215
Query: 480 VSGHFTYGVIA----LSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCA 535
IA LS T +F L L Y G + ++ + ++LV P
Sbjct: 216 ---------IALTILLSGLTLIF--LLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTT 264
Query: 536 LGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSG 595
+G + G ++ G +E V+T++ DKTGT+T+G ++ +
Sbjct: 265 IGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI--- 321
Query: 596 SLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIVEAAE---FSNCQNVKVAD 650
P+ +SE E+ A A + T P G++IVE A+ ++ +
Sbjct: 322 ----------PVPGVSEEELADAAQLASLADET--PEGRSIVELAKKLGIELREDDLQSH 369
Query: 651 GTFIEEPG----SGTVAIIEDRKVSVGTID----WLRSHGVDTSTFQEVEMEDLMNQS-- 700
F+ SG V + R++ G +D ++R G + ++++
Sbjct: 370 AEFVPFTAQTRMSG-VDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGT 428
Query: 701 -LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759
LV V + + G+IY++D ++ L GI M++GD +A +A+ G+
Sbjct: 429 PLV-VVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV- 486
Query: 760 KDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVA 819
D ++ P +K I + Q + +VAM GDG NDA ALA + +GVAM G AA E A
Sbjct: 487 -DDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA 545
Query: 820 SVV 822
++V
Sbjct: 546 NMV 548
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 3e-32
Identities = 138/506 (27%), Positives = 223/506 (44%), Gaps = 109/506 (21%)
Query: 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPL 422
+ AR L + + EVP L GD ++V G+ IPADG V G ++VDES+ TGE
Sbjct: 104 TFARKLREPG---AAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVDESAITGESA 160
Query: 423 PVTKIP---ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQ 479
PV + S V G+ L+ + + + GE+ + ++ LVE A+ ++ P +
Sbjct: 161 PVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNE----- 215
Query: 480 VSGHFTYGVIA----LSAATFVFWNLFG-AHVLPTAIQYGGPVSLALQLSCSVLVVACPC 534
IA L+ T +F L A + P A GG +S+ VLV C
Sbjct: 216 ---------IALTILLAGLTIIF--LLVVATLPPFAAYSGGALSIT------VLVALLVC 258
Query: 535 ALGLATPTAMLVGTSLGATRGLL----------LRGGNILEKFAM----------VNTVV 574
L+ T++G GLL + N++ A V+T++
Sbjct: 259 ----------LIPTTIG---GLLSAIGIAGMDRVLQANVI---ATSGRAVEAAGDVDTLL 302
Query: 575 FDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGK 632
DKTGT+T+G ++ + P+ ++E E+ A + + T P G+
Sbjct: 303 LDKTGTITLGNRQASEFL-------------PVPGVTEEELADAAQLSSLADET--PEGR 347
Query: 633 AIVEAAEFSNCQNVKV-------ADGTFIEEPG----SGT-VAIIEDRKVSVGTI-DWLR 679
+IV A+ Q + TF+ SG + E RK +V I ++
Sbjct: 348 SIVVLAK----QRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVE 403
Query: 680 SHGVDTSTFQEVEMEDLMNQS---LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI 736
S+G + ++++ + LV V DN + G+IY++D ++ L GI
Sbjct: 404 SNGGHFPAELDAAVDEVARKGGTPLV-VAEDNRVLGVIYLKDIVKPGIKERFAELRKMGI 462
Query: 737 GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDA 796
M++GD +A +A+ G+ D L+ P +K I + Q + +VAM GDG NDA
Sbjct: 463 KTVMITGDNPLTAAAIAAEAGV--DDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDA 520
Query: 797 AALASSHIGVAMGGGVGAASEVASVV 822
ALA + +GVAM G AA E ++V
Sbjct: 521 PALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 4e-28
Identities = 119/495 (24%), Positives = 220/495 (44%), Gaps = 58/495 (11%)
Query: 369 VDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIP 428
+ D +I+ + L G + V G++IP DG V G +TVDES+ TGE PV K
Sbjct: 109 IKQDGSYEMIDA--SDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKES 166
Query: 429 ESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFT 485
+ V G+ + L VE+ G + + ++ LVE A ++ P +
Sbjct: 167 GGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNE----------- 215
Query: 486 YGVIALSAATFVFWNLFGAHVL---PTAIQYGGPVSLALQLSCSVLVVACPCALGLATPT 542
IAL +F +L P A +S+A+ ++ +V ++ P +G
Sbjct: 216 ---IALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLI--PTTIGGLLSA 270
Query: 543 AMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNS 602
+ G +L + G +E VN ++ DKTGT+T G + +
Sbjct: 271 IGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI---------- 320
Query: 603 KQNPIHPLSETEILK-----FAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP 657
P+ + + + + + +T P G++IV+ A + ++ G +I
Sbjct: 321 ------PVKSSSFERLVKAAYESSIADDT--PEGRSIVKLAYKQHI-DLPQEVGEYIPFT 371
Query: 658 GSGTVAIIE--DRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ------SLVYVGVDNM 709
++ ++ R+V G + + + V+++ L+ + + V DN
Sbjct: 372 AETRMSGVKFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE 431
Query: 710 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769
+ G+IY++D I+D L GI M +GD + +A +A G+ D+ ++ KP
Sbjct: 432 ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV--DRFVAECKP 489
Query: 770 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 829
+K I E Q ++VAM GDG NDA ALA +++G+AM G +A E A+++ + + +
Sbjct: 490 EDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPT 549
Query: 830 QLLVALELSRLTMKT 844
+L+ + + + + T
Sbjct: 550 KLMEVVLIGKQLLMT 564
|
Length = 673 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 9e-28
Identities = 131/550 (23%), Positives = 210/550 (38%), Gaps = 95/550 (17%)
Query: 348 IKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407
KA + + L L KAR+L D E+P + L GD + + GD +PAD +
Sbjct: 77 NKAGNAVEALKQSLAPKARVLRDG----KWQEIPASELVPGDVVRLKIGDIVPADCRLFE 132
Query: 408 GRS-TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEA 466
G VD+++ TGE LPVTK +GS G V G T G LV+
Sbjct: 133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQS- 191
Query: 467 QSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAI-QYGGPVSLALQLSC 525
+ SGH + + V + L G LQ +
Sbjct: 192 ----------TETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFAL 241
Query: 526 SVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNI------LEKFAMVNTVVFDKTG 579
+LV P A+ P + V ++GA L + I +E+ A ++ + DKTG
Sbjct: 242 VLLVGGIPIAM----PAVLSVTMAVGAAE--LAKKKAIVTRLTAIEELAGMDILCSDKTG 295
Query: 580 TLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA--AGVESNTVHPIGKAIV-E 636
TLT+ + + +++ + D + +L +A A E + I A++
Sbjct: 296 TLTLNKLSIDEILPFFNGFDKDD------------VLLYAALASREEDQ-DAIDTAVLGS 342
Query: 637 AAEFSN-CQNVKVADGTFIEEPGSGTVAIIEDR------KVSVGT----IDWLRSHGVDT 685
A + KV + + T A +ED KV+ G +D
Sbjct: 343 AKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILD--LCDNKKE 400
Query: 686 STFQEVE--MEDLMNQSLVYVGVDNM-------LAGLIYVEDRIRDDAAHVVNSLSSQGI 736
++VE +++L ++ +GV GL+ + D R D + G+
Sbjct: 401 IE-EKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGV 459
Query: 737 GVYMLSGDKKNSAEYVASLVGI----------PKDKV-----------------LSGVKP 769
V M++GD A+ A +G+ K + V P
Sbjct: 460 EVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFP 519
Query: 770 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLS 829
K + LQ ++V M GDG+NDA AL + +G+A+ G AA A +VL LS
Sbjct: 520 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLS 579
Query: 830 QLLVALELSR 839
++ A+ SR
Sbjct: 580 VIVDAILESR 589
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-23
Identities = 125/588 (21%), Positives = 221/588 (37%), Gaps = 109/588 (18%)
Query: 375 DSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTV-DESSFTGEPLPVTKIPESE-- 431
++ + + VGD + + GD +PADGV +G S DESS TGE P+ K P +
Sbjct: 175 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPF 234
Query: 432 VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIAL 491
+ +G++ G+ + V G + G ++ + +A P+Q +++G G +
Sbjct: 235 LLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLI--GKFGM 292
Query: 492 SAATFVFWNLFGAHVLPTAI-------QYGGPVSLALQLSCSVLVVACPCALGLATPTAM 544
+A +F L +V + ++ +++VVA P L LA A+
Sbjct: 293 GSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIAL 352
Query: 545 LVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTK-------------- 590
L+R E + DKTGTLT V +
Sbjct: 353 AYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVL 412
Query: 591 ---------------VVTSGSLTDPNSKQNPIHPLSETE--ILKFA--AGVESNTVHPIG 631
+ S S + S+TE +L F + V
Sbjct: 413 RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEE 472
Query: 632 KAIVEAAEFSNCQN-----VKVADGT-----------------FIEEPGSGTVAIIEDRK 669
K +V+ F++ + VK + G + I +D K
Sbjct: 473 K-VVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDK 531
Query: 670 VSVGTI------DWLRSHGVDTSTFQ--EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIR 721
+ D LR+ + F E +D N+ L +GV + ++D +R
Sbjct: 532 DRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGV-------VGIKDPLR 584
Query: 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI----------------------- 758
V GI V M++GD ++A+ +A GI
Sbjct: 585 PGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDP 644
Query: 759 --PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAA 815
PK +VL+ P +K+ + L++ VVA+ GDG NDA AL + +G +MG G A
Sbjct: 645 ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVA 704
Query: 816 SEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIA 863
E + ++L+ + + ++ A++ R +++ L + N+V + +
Sbjct: 705 KEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILT 752
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 6e-19
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 65/243 (26%)
Query: 570 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHP 629
+ VVFD GTLT G PVV +L+ AA
Sbjct: 1 IKAVVFDLDGTLTDGEPVVP---------------------EAEALLEAAA--------A 31
Query: 630 IGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ 689
+G AIV AA + G + +R + +
Sbjct: 32 LGVAIVIAAG---------------------------ENLTKEGREELVRRLLLRALAGE 64
Query: 690 EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA 749
E+ E L + V +D ++ GLI + D + A + L GI + +L+GD + +A
Sbjct: 65 ELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTA 124
Query: 750 EYVASLVGIPKDKVLSGV-------KPNEK--KRFINELQNDENVVAMVGDGINDAAALA 800
+A L+G+ V + + KP+ K + + EL V MVGDG+ND A
Sbjct: 125 NAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 801 SSH 803
++
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 3e-16
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 681 HGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYM 740
D + F+ +E L ++GV ML D R + A + + GI V M
Sbjct: 512 LLSDPANFEAIE------SDLTFIGVVGML-------DPPRPEVADAIEKCRTAGIRVIM 558
Query: 741 LSGDKKNSAEYVASLVGI-----------------------------PKDKVLSGVKPNE 771
++GD K +AE + +GI + S V+P+
Sbjct: 559 ITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 831
K + LQ +VAM GDG+NDA AL + IG+AMG G A E + +VL + + +
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 832 LVALELSRLTMKTVKQNLWWAFGYNI 857
+ A+E R +KQ + + NI
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 6e-14
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 711 AGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---------- 760
GL+ + D R V +L + G+ + M++GD + +A +A +G+P
Sbjct: 520 LGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEK 579
Query: 761 ---------DKVLSGV------KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG 805
+++ V P K + + LQ +VVAM GDG+NDA AL + IG
Sbjct: 580 LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIG 639
Query: 806 VAMG-GGVGAASEVASVVLMGNRLSQLLVALE 836
VAMG G A E A ++L + + +L A+E
Sbjct: 640 VAMGQTGTDVAKEAADMILTDDDFATILSAIE 671
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 2e-12
Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 32/294 (10%)
Query: 388 GDHIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLN------ 440
GD + + GDR+PAD +V A ++DES+ TGE PV+K+ AA + +L
Sbjct: 138 GDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIA 197
Query: 441 --GTLTVE------VRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALS 492
GTL V G T G + ++++ + + P+Q+ D + LS
Sbjct: 198 FMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQ-------LS 250
Query: 493 AATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGA 552
+F + G L Q G +S S+ V A P L + + +G +
Sbjct: 251 LVSFG---VIGVICLVGWFQ-GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306
Query: 553 TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE 612
+ ++R +E VN + DKTGTLT VTK+ TS L ++ N + L++
Sbjct: 307 KKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGL---HTMLNAV-SLNQ 362
Query: 613 TEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIE 666
+ V I+EA N + T + P VA+IE
Sbjct: 363 FGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTD--VALIE 414
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 3e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
L V GMTC GC + +++ LE P V S V+L T A V + E L
Sbjct: 2 LSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSP---------EELL 52
Query: 190 KHLTSCGFKSS 200
+ + G+K+
Sbjct: 53 EAIEDAGYKAR 63
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 3e-11
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 736 IGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND 795
+ +Y+ SGD+K S +A VGIP ++V +G P K + I EL+ V MVG+G ND
Sbjct: 46 VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGAND 105
Query: 796 AAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVALELSRL 840
AL + +G+ G + + V++ L + + S L
Sbjct: 106 ILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDTSEL 152
|
Length = 152 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 2e-10
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGD 389
++L A V++ + K++ M ++P +A ++ D + + + + VGD
Sbjct: 108 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK----MSINAEQVVVGD 163
Query: 390 HIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPE---------SEVAAGSIN- 438
+ V GDRIPAD ++ A VD SS TGE P T+ PE +A S N
Sbjct: 164 LVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNC 223
Query: 439 LNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY---GV-IALSAA 494
+ GT V G T MG I L ++ + P+ A ++ HF + GV + L +
Sbjct: 224 VEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI---AIEIE-HFIHIITGVAVFLGVS 279
Query: 495 TFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLG-AT 553
F+ + G L I G ++V P L LAT T L T+ A
Sbjct: 280 FFILSLILGYTWLEAVIFLIG-----------IIVANVPEGL-LATVTVCLTLTAKRMAR 327
Query: 554 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 588
+ L++ +E +T+ DKTGTLT R V
Sbjct: 328 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 362
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 3e-10
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 23/148 (15%)
Query: 707 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG 766
++ G + D ++ + +L GI V +L+GD + + VGI + L G
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLG 562
Query: 767 -----------------------VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSH 803
+ P +K R I L+ + V +GDGINDA AL +
Sbjct: 563 ADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKAD 622
Query: 804 IGVAMGGGVGAASEVASVVLMGNRLSQL 831
+G+++ A E + ++L+ L L
Sbjct: 623 VGISVDTAADIAKEASDIILLEKSLMVL 650
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 5e-10
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 691 VEMEDLMNQSLVYVGVDN---MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 747
V + L + Y D +L G I D ++ A + +L + G+ V +L+GD +
Sbjct: 519 VATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL 578
Query: 748 SAEYVASLVGIPKDKVLSG-----------------------VKPNEKKRFINELQNDEN 784
A V VG+ +VL G + P K+R + L+ + +
Sbjct: 579 VAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGH 638
Query: 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836
VV +GDGINDA AL ++ IG+++ G V A E A ++L L + L+ LE
Sbjct: 639 VVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIIL----LEKSLMVLE 686
|
Length = 902 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 5e-10
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 43/192 (22%)
Query: 684 DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG 743
D E L ++G LI + D R+++A V GI V+ML+G
Sbjct: 618 DDQLKNETLNRATAESDLEFLG-------LIGIYDPPRNESAGAVEKCHQAGINVHMLTG 670
Query: 744 DKKNSAEYVASLVGI-PKD-----------KVLSGVK----------------------- 768
D +A+ +A VGI P + V++G +
Sbjct: 671 DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCA 730
Query: 769 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNR 827
P K + I L + AM GDG+ND+ +L +++G+AMG G A + + +VL +
Sbjct: 731 PQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDN 790
Query: 828 LSQLLVALELSR 839
+ +L A+E R
Sbjct: 791 FASILNAIEEGR 802
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 7e-09
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 66/238 (27%)
Query: 711 AGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI------------ 758
GLI + D R V S GI V M++GD +A+ +A VGI
Sbjct: 560 VGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIA 619
Query: 759 -----------PKDK---VLSGVK-------------------------PNEKKRFINEL 779
P+D V+ G P +K +
Sbjct: 620 ARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679
Query: 780 QNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELS 838
Q +VA+ GDG+ND+ AL + IGVAMG G + + A ++L+ + + ++ +E
Sbjct: 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739
Query: 839 RLTMKTVKQNLWWAFGYNI-----------VGIPIAAG---VLLPVTGTMLTPSIAGA 882
RL +K+++ + NI IP+ G +L GT + P+I+ A
Sbjct: 740 RLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLA 797
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 2e-08
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVW 169
L V GMTC GCA V++ L P VSS SV+L T V
Sbjct: 1 TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVT 41
|
Length = 62 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 3e-08
Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 43/267 (16%)
Query: 388 GDHIVVLPGDRIPAD-GVVRAGRSTVDESSFTGEPLPVTKIPES-----EVAAGSINL-- 439
GD + + GD++PAD V+ VD+S TGE + V K ES V N+
Sbjct: 94 GDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLF 153
Query: 440 NGTLTVE------VRRPGGETAMGDIVRLVEEAQSREAPVQR----LADQVSGHFTYGVI 489
+GTL V V R G T +G I + A+ + P+Q+ + +S I
Sbjct: 154 SGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICI 213
Query: 490 ALSAATFVFWNLF--GAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVG 547
+ +N G + AI Y +++ ++ V A P L T + +G
Sbjct: 214 LVWVINIGHFNDPALGGGWIQGAIYY-------FKIAVALAVAAIPEGLPAVITTCLALG 266
Query: 548 TSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPI 607
T A + ++R +E + DKTGTLT + V KVV
Sbjct: 267 TRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDP----------- 315
Query: 608 HPLSETEILKFAAGVESNTVHPIGKAI 634
S + + +F V T P G I
Sbjct: 316 ---SSSSLNEFC--VTGTTYAPEGGVI 337
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 7e-07
Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 66/247 (26%)
Query: 377 IIEVPCNSLHVGDHIVVLPGDR---IPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVA 433
+ + + L GD IV +P +P D V+ +G V+ES TGE +PV K P +
Sbjct: 239 WVTIASDELVPGD-IVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNG 297
Query: 434 AGSINL------------NGTLTVEVR-------------RPGGETAMGDIVRLVEEAQS 468
+L GT +++R R G T+ G +VR +
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI--LYP 355
Query: 469 REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVL 528
+ + D V+AL + L I+ G P+ + S ++
Sbjct: 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL---------IKDGRPLGKIILRSLDII 406
Query: 529 VVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAM-------------VNTVVF 575
+ P AL P + +G + R L+K + ++ F
Sbjct: 407 TIVVPPAL----PAELSIGINNSLAR---------LKKKGIFCTSPFRINFAGKIDVCCF 453
Query: 576 DKTGTLT 582
DKTGTLT
Sbjct: 454 DKTGTLT 460
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 3e-06
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV 168
L V GMTCG C +V++ LE V+S V+L TA V
Sbjct: 6 LKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATV 44
|
Length = 71 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 7e-06
Identities = 59/199 (29%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 299 LVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358
L LGA+S T AA V L M+ LL N Q A+ +D L
Sbjct: 109 LTILGAISYATEDLFAAGVIAL----------MVAISTLL--NFIQEARSTKAAD--ALK 154
Query: 359 GILPSKARLL-VDNDAKDS-IIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST-VDES 415
++ + A +L V ND ++ +E+P + L GD I + GD IPAD + R V ++
Sbjct: 155 AMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQA 214
Query: 416 SFTGEPLPVTKIPESEVAAGSINL-------------NGTLTVEVRRPGGETAMGDIVRL 462
S TGE LPV K + S L +GT V G T G +
Sbjct: 215 SLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274
Query: 463 VEEAQSREAPVQRLADQVS 481
V E S Q+ +VS
Sbjct: 275 VSEQDSEPNAFQQGISRVS 293
|
Length = 902 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 1e-05
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 57/307 (18%)
Query: 349 KATSDMTGLLGILPSKARLLVD--NDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD-GVV 405
KA M L + A ++ + +DA DS VP GD ++ GD IPAD ++
Sbjct: 104 KAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVP------GDICLLKTGDTIPADLRLI 157
Query: 406 RAGRSTVDESSFTGEPLPVTKIP------ESEVAAGS-INLNGTLTVEVR--------RP 450
DE+ TGE LPV K E + G INL + + +
Sbjct: 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIAT 217
Query: 451 GGETAMGDIVR-------LVEEAQSREAPVQRLAD----QVSGHFTYGVIALSAAT---- 495
+ +G I L + + + +R + +V+ T + L+ T
Sbjct: 218 ALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHR 277
Query: 496 -------FVFW--NLFGAHVLPT-AIQYGGPVSL-ALQLSCSVLVVACPCALGLATPTAM 544
+F +F V+ V++ A+ L+ S++ P +L M
Sbjct: 278 KLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISII----PESLIAVLSITM 333
Query: 545 LVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKV--VTSGSLTDPNS 602
+G + + R +++R + LE VN + DKTGT+T G+ + ++ G+++ NS
Sbjct: 334 AMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393
Query: 603 KQNPIHP 609
+ +P
Sbjct: 394 -DDAFNP 399
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-05
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 758 IPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 808
+ V + + P++K+ + LQ + V M GDG ND AL + +G+++
Sbjct: 776 LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 3e-05
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 20/95 (21%)
Query: 38 LTSISTQTLPFASLSRRKFSAV-LPPHIRCRLECMSSCAA-------------------S 77
L+S Q F+S S + + I+C +S +A +
Sbjct: 16 LSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSASLVANGAVALLSASA 75
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKL 112
GG GG GG GGGGGGG GG G +L
Sbjct: 76 ISGGGGGGGGGFGGFGGGGGGGGGGGGGWRFWLRL 110
|
Length = 796 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 7e-05
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 712 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK--- 768
G + D ++ AA + +L G+ V +L+GD + VG+ + L G +
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEA 602
Query: 769 --------------------PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 808
P +K R + LQ + + V +GDGINDA AL + +G+++
Sbjct: 603 MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662
Query: 809 GGGVGAASEVASVVLM 824
G A E A ++L+
Sbjct: 663 DSGADIAKESADIILL 678
|
Length = 903 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 19/102 (18%)
Query: 728 VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---------KDKVLSG------VKPNEK 772
V +L +G V ++SG AE+V +G+ +D L+G V + K
Sbjct: 94 VKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153
Query: 773 KRFINELQNDENV----VAMVGDGINDAAALASSHIGVAMGG 810
+ + L E + VGDG ND + + ++ +G+A
Sbjct: 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNA 195
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 3e-04
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 38/303 (12%)
Query: 294 PNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSD 353
P + L L VS T A ++ L M++A LLG E RA+ +A
Sbjct: 70 PFIYILAMLMGVSYLTDDLEATVIIAL----------MVLASGLLGFIQESRAE-RAAYA 118
Query: 354 MTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST-V 412
+ ++ + R++ +N S+ EVP ++L GD I + GD IPAD V + R +
Sbjct: 119 LKNMVKNTATVLRVINEN-GNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFI 177
Query: 413 DESSFTGEPLPVTKIPESEVAA-------------GSINLNGTLTVEVRRPGGETAMGDI 459
++S+ TGE LPV K E + A G+ L+G V G T G +
Sbjct: 178 NQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSL 237
Query: 460 VRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSL 519
E + + A F GV ++S F + VL G
Sbjct: 238 AIAATERRGQTA------------FDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLE 285
Query: 520 ALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTG 579
A + +V V P L + + + G + + ++++ + ++ F ++ + DKTG
Sbjct: 286 AFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTG 345
Query: 580 TLT 582
TLT
Sbjct: 346 TLT 348
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 21/39 (53%), Positives = 22/39 (56%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G+ GG GGD GG GGGGGGG GG G GGR
Sbjct: 113 GSGGGGGGGDEGGYGGGGGGGGGGYGGESRSGGGGGRAS 151
|
Length = 182 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGV-------KPNEK 772
++ +L S G + +++ + + + +G+ D ++ G P
Sbjct: 92 PGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPL 151
Query: 773 KRFINELQNDENVVAMVGDGINDA-AALAS--SHIGVAMGGGVGAASEVASVVLMGNRLS 829
+ +L D MVGD +ND AA A+ +GV G A ++ + L+
Sbjct: 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLA 211
Query: 830 QLLVALE 836
+LL L
Sbjct: 212 ELLALLA 218
|
Length = 220 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Query: 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---------KDKVLSG-- 766
R+ A +V +L + G V ++SG E +A +GI D L+G
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV 135
Query: 767 ----VKPNEKKRFINELQNDENV----VAMVGDGINDAAALASSHIGVA 807
K + + EL + + GD ND L ++ + +A
Sbjct: 136 VGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 7e-04
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 77 SFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
FG G G GGGG GGGG GG GG + + GG GG
Sbjct: 5 GFGGGRGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGGGGGG 45
|
Length = 293 |
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 20/39 (51%), Positives = 20/39 (51%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G GGS GG GG GG GGG GG GG G GG
Sbjct: 109 GGRGGSGGGGGGGDEGGYGGGGGGGGGGYGGESRSGGGG 147
|
Length = 182 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G GG GGGG GGG GG G GGRGG
Sbjct: 10 RGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGGGG-GGRGG 48
|
Length = 293 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.002
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 78 FGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G G GGGGGGG G GG GG + GRGG
Sbjct: 2 MGGGFGGGRGGGRGGGGGGGRGGGGRGGGRGGGRGRGRGG 41
|
Length = 293 |
| >gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV 168
L + GMTC CAA VK LE P V SA V+ +A +
Sbjct: 2 TTLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQL 42
|
Length = 561 |
| >gnl|CDD|219320 pfam07172, GRP, Glycine rich protein family | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.002
Identities = 21/39 (53%), Positives = 21/39 (53%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G GG GG GGG GGGGG GG GG GG GG
Sbjct: 51 GYGGGGGGGYGGGGYYGGGGGYGGGGGGYPGGGGGGYGG 89
|
This family of proteins includes several glycine rich proteins as well as two nodulins 16 and 24. The family also contains proteins that are induced in response to various stresses. Length = 91 |
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.004
Identities = 18/41 (43%), Positives = 18/41 (43%)
Query: 77 SFGAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRGG 117
G G GG GG GGG G G GG GG GG G
Sbjct: 16 GGGGGGRGGGGRGGGRGGGRGRGRGGGGGGRGGGGGGGPGK 56
|
Length = 293 |
| >gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 28/125 (22%)
Query: 674 TIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVN---S 730
T D L++HG+ V + +DN L V D +
Sbjct: 19 TPDILKAHGIKG----------------VILDLDNTL-----VPWDNPDATPELRAWLAE 57
Query: 731 LSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKK--RFINELQNDENVVAM 788
L GI V ++S +K++ A +G+P + KP + R + E+ V M
Sbjct: 58 LKEAGIKVVVVSNNKESRVARAAEKLGVPF--IYRAKKPFGRAFRRALKEMNLPPEEVVM 115
Query: 789 VGDGI 793
VGD +
Sbjct: 116 VGDQL 120
|
Length = 175 |
| >gnl|CDD|164795 PHA00370, III, attachment protein | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 79 GAAGGSAGGDVGGGGGGGGGGNGGSDGGDSKSKLGGRG 116
G GG +GG GG GGGG GGS+GG + L G
Sbjct: 103 GNTGGGSGGGDTGGSGGGGSDGGGSEGGSTGKSLTKEG 140
|
Length = 297 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 932 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.96 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.67 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 99.28 | |
| COG2608 | 71 | CopZ Copper chaperone [Inorganic ion transport and | 99.22 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.18 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.18 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.15 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.15 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.15 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.13 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.12 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.11 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.08 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.05 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.04 | |
| PLN02887 | 580 | hydrolase family protein | 99.02 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.99 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.99 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.87 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.83 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.8 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.75 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.73 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.7 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.67 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.58 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.57 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.55 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.45 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.4 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.39 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.31 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.28 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.28 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.16 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.11 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.1 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.07 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.06 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.05 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.0 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.93 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.85 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.78 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.76 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.72 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.7 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.66 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.6 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.58 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.58 | |
| TIGR00003 | 68 | copper ion binding protein. This model describes a | 97.58 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.56 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.54 | |
| PLN02957 | 238 | copper, zinc superoxide dismutase | 97.45 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.37 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.35 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.33 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.31 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.31 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.27 | |
| KOG4656 | 247 | consensus Copper chaperone for superoxide dismutas | 97.26 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.22 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.21 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.21 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.2 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.19 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.15 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.15 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.12 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.09 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.08 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.07 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.06 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.02 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.98 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.97 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.94 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.89 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.85 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.84 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.75 | |
| KOG1603 | 73 | consensus Copper chaperone [Inorganic ion transpor | 96.74 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.69 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.68 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.67 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.67 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.67 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.57 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.51 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.48 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.47 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.45 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.42 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.41 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.36 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.3 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.29 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.22 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.16 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 96.05 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.04 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.04 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.02 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.02 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.02 | |
| PLN02940 | 382 | riboflavin kinase | 95.95 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.95 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.83 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.78 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.74 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.68 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.62 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 95.59 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.59 | |
| PLN02811 | 220 | hydrolase | 95.4 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.35 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.25 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.83 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.68 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.62 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.93 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.88 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.61 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.35 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 93.09 | |
| TIGR02052 | 92 | MerP mercuric transport protein periplasmic compon | 93.06 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.94 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 92.74 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.74 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 92.55 | |
| COG4907 | 595 | Predicted membrane protein [Function unknown] | 92.06 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 91.94 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 91.73 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 91.56 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.43 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 91.38 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.37 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.4 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 90.31 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 88.92 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.5 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 86.9 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 86.66 | |
| PLN03138 | 796 | Protein TOC75; Provisional | 86.14 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 85.23 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 84.64 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 83.8 | |
| PRK13748 | 561 | putative mercuric reductase; Provisional | 83.0 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 81.91 | |
| COG2177 | 297 | FtsX Cell division protein [Cell division and chro | 81.76 | |
| cd00371 | 63 | HMA Heavy-metal-associated domain (HMA) is a conse | 81.54 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 80.6 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 80.03 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-138 Score=1226.07 Aligned_cols=707 Identities=43% Similarity=0.642 Sum_probs=640.1
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccc-cchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKV-IPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~-~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.+..|.|+||+|++|+++|| +|+++|||.+++||+.++++.|.||+...+ . +.+.+.+++.||.......
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~--------~~~~~~v~~~gy~~~~~~~ 72 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLP--------ADIVAAVEKAGYSARLTAA 72 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccH--------HHHHHHHHhcCcccccccc
Confidence 35789999999999999999 999999999999999999999999976544 3 7899999999998765111
Q ss_pred CCccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHH
Q 002354 205 GTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILD 284 (932)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 284 (932)
.... .+ .+... . ++..+++++++++..+.++..+..+.+. ....|+.+++++|+++++|||||+.
T Consensus 73 ~~~~-----~~-~~~~~-~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~v~~~~g~~f~~~ 137 (713)
T COG2217 73 LADP-----AE-AEARL-L-RELLRRLIIAGLLTLPLLLLSLGLLLGA-------FLLPWVSFLLATPVLFYGGWPFYRG 137 (713)
T ss_pred ccch-----hh-hhhhh-h-hhHHHHHHHHHHHHHHHHHHHHHhhcch-------hhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0000 00 00000 1 2234567777777766655443333221 2245788999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCe
Q 002354 285 GVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK 364 (932)
Q Consensus 285 a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~ 364 (932)
+|+.++++.+|||+|+++|++++|+||.|.++.+ .||++++++++|+++|+++|.+++.|+++++++|.++.|++
T Consensus 138 a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-----~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~ 212 (713)
T COG2217 138 AWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-----VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKT 212 (713)
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCE
Confidence 9999999999999999999999999999998874 89999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEE
Q 002354 365 ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLT 444 (932)
Q Consensus 365 ~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~ 444 (932)
++++++++ ++++||+++|++||+|+|+|||+||+||+|++|++.||||+|||||.|+.|.+||.|++||+|.+|.++
T Consensus 213 A~~~~~~~---~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~ 289 (713)
T COG2217 213 ATVVRGDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLT 289 (713)
T ss_pred EEEEecCC---cEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEE
Confidence 99987642 389999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHH
Q 002354 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (932)
Q Consensus 445 ~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (932)
++|+++|.||++++|+++++++|.+|+|+|+++||++.+|+|.++++++++|++|++++. .+|..++.++
T Consensus 290 i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----------~~~~~a~~~a 359 (713)
T COG2217 290 IRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----------GDWETALYRA 359 (713)
T ss_pred EEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887753 3567899999
Q ss_pred HHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCC
Q 002354 525 CSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ 604 (932)
Q Consensus 525 i~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~ 604 (932)
+++|+++|||||++++|++++.++.+++|+||++|+++++|+++++|+++||||||||+|+|+|+++...
T Consensus 360 ~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~---------- 429 (713)
T COG2217 360 LAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL---------- 429 (713)
T ss_pred HhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCC
Q 002354 605 NPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVD 684 (932)
Q Consensus 605 ~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~ 684 (932)
++ +++++|++++++|.+|+||+++||+++++..+.. ....+++++|+|+.+.++|+.+.+|+++++.+++.+
T Consensus 430 ---~~-~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~~----~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~ 501 (713)
T COG2217 430 ---DG-DEDELLALAAALEQHSEHPLAKAIVKAAAERGLP----DVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGID 501 (713)
T ss_pred ---CC-CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCC----CccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCC
Confidence 33 7899999999999999999999999999887632 224499999999999999999999999999988765
Q ss_pred Cch-hhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCce
Q 002354 685 TST-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763 (932)
Q Consensus 685 ~~~-~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v 763 (932)
... .+..+..+.+|.++++++.|++++|++.++|++|++++++|++||++|++++|+|||++.+|+++|+++||+ ++
T Consensus 502 ~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--~v 579 (713)
T COG2217 502 LPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--EV 579 (713)
T ss_pred ccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--hh
Confidence 443 223344556789999999999999999999999999999999999999999999999999999999999997 89
Q ss_pred ecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 002354 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMK 843 (932)
Q Consensus 764 ~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 843 (932)
++++.||||.++|++||++|++|+|||||+||+|||++||||||||.|+|.|+++||+++++||+..+++++++||+|++
T Consensus 580 ~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~ 659 (713)
T COG2217 580 RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRR 659 (713)
T ss_pred eccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccc
Q 002354 844 TVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 901 (932)
Q Consensus 844 ~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~ 901 (932)
+||||++|+|+||+++||+|+++ +++|++|+++|.+||++|++||+||+..
T Consensus 660 ~IkqNl~~A~~yn~~~iplA~~g-------~l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 660 IIKQNLFWAFGYNAIAIPLAAGG-------LLTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------hcCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 99999999999999999999865 4899999999999999999999999753
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-135 Score=1172.34 Aligned_cols=775 Identities=40% Similarity=0.588 Sum_probs=682.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (932)
..+.|.|.||+|++|+.+||+.+++++||++++|+..++++.|.||++...+ .++.+.+++.||++......
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~p--------r~i~k~ie~~~~~~~~~~~~ 217 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGP--------RDIIKAIEETGFEASVRPYG 217 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccCh--------HHHHHHHHhhcccceeeecc
Confidence 6799999999999999999999999999999999999999999999999988 78999999999998766532
Q ss_pred CccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHHH-Hhh------hhhhhhHHHhhhhHHHHHHHHHHHHhcc
Q 002354 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLS-HIL------GAKASWIHVFHSTGFHLSLSLFTLLGPG 278 (932)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~g 278 (932)
+......+ + .++ +++.+++.++.+.++++++++..+. ++. .. +.++.+....+++++|++|++|..|
T Consensus 218 ~~~~~~~l-~-~~~---ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~vqf~~G 291 (951)
T KOG0207|consen 218 DTTFKNSL-K-HKE---EIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLV-PFLPGLSYGNSLSFVLATPVQFVGG 291 (951)
T ss_pred ccchhhhh-h-hhh---HHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhc-cccccchhhhHHHhhhheeeEEecc
Confidence 22211011 1 112 3455566677776666655443211 111 11 2334455566889999999999999
Q ss_pred HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccc--cchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Q 002354 279 FQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLG--WKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTG 356 (932)
Q Consensus 279 ~~~~~~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~--~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~ 356 (932)
||||.+||++|+|++.|||+|+++++.++|+||.+.....-.. +..|||++.|++.|+.+|+|+|.+++.|+..++.+
T Consensus 292 ~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alsk 371 (951)
T KOG0207|consen 292 RPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSK 371 (951)
T ss_pred eeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHH
Confidence 9999999999999999999999999999999998765542222 78999999999999999999999999999999999
Q ss_pred hhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccce
Q 002354 357 LLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGS 436 (932)
Q Consensus 357 L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt 436 (932)
|+++.|.++.++.++. .+++|+.+.|++||+|.|+||++||+||+|++|+++||||++|||++||.|++|+.|.+||
T Consensus 372 Lmsl~p~~a~ii~~g~---~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGs 448 (951)
T KOG0207|consen 372 LMSLAPSKATIIEDGS---EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGS 448 (951)
T ss_pred HhhcCcccceEeecCC---cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeee
Confidence 9999999999987632 3889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCc
Q 002354 437 INLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGP 516 (932)
Q Consensus 437 ~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~ 516 (932)
+|.+|.+.++++++|.||.++||+++++++|.+|+|+|+++||++.||+|+++++++.+|++|.+++...+.....+...
T Consensus 449 iN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~ 528 (951)
T KOG0207|consen 449 INLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDA 528 (951)
T ss_pred ecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999886433222222257
Q ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCC
Q 002354 517 VSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGS 596 (932)
Q Consensus 517 ~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~ 596 (932)
+..+|+.+++||+++|||+|+||+|+++++++..+|++|+|+|++++||.+.++++|+||||||||+|+|.|.++....
T Consensus 529 ~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~- 607 (951)
T KOG0207|consen 529 FSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLS- 607 (951)
T ss_pred HHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecC-
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999998872
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCe--eEEEEcCeEEEeec
Q 002354 597 LTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSG--TVAIIEDRKVSVGT 674 (932)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g--~~~~i~~~~~~~Gs 674 (932)
+.++..+++.++++.|..++||+++||++|++..+.........++++.||+| +...+++.++.+|+
T Consensus 608 -----------~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN 676 (951)
T KOG0207|consen 608 -----------NPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGN 676 (951)
T ss_pred -----------CcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeech
Confidence 23778999999999999999999999999999877544444445788899999 77888999999999
Q ss_pred HHHHhhcCCCCch--hhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 002354 675 IDWLRSHGVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 752 (932)
Q Consensus 675 ~~~i~~~~~~~~~--~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~i 752 (932)
.+|+.+++....+ .+..++.+..|++++|+++|+++.|++.++|++|+|+..+|+.||++|++++|+||||..+|.++
T Consensus 677 ~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 677 KEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred HHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 9999998875442 22334456789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH
Q 002354 753 ASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 753 a~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
|+++|++ .||+++.|+||.++|+.+|++++.|+|||||+||+|||++|||||+||.|++.|.|+||+|++.||+.+++
T Consensus 757 A~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~ 834 (951)
T KOG0207|consen 757 AQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVP 834 (951)
T ss_pred HHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhH
Confidence 9999987 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhcccccccccccc--
Q 002354 833 VALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASF-- 910 (932)
Q Consensus 833 ~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~-- 910 (932)
.+++++|+++++||+|+.|+++||+++||+|+|+|.|+. +.|+||.|.++|.+||+.|++||+.|++++.|.-....
T Consensus 835 ~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~-~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~~ 913 (951)
T KOG0207|consen 835 FAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG-IVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYRY 913 (951)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCc-cccCchHHHHHHHhhhHHHhhhHHHHhhccccccccceec
Confidence 999999999999999999999999999999999999975 89999999999999999999999999887766422222
Q ss_pred ----CCCCCCCCCCccccccccccCC
Q 002354 911 ----QAPSSRVNSNVDSHQLMDLKGK 932 (932)
Q Consensus 911 ----k~~~~~~~~~~~~~~~~~~~~~ 932 (932)
+..-.+.-.++++|+=+|-||+
T Consensus 914 e~~~~~~~~~~~~~~~~~~gl~~~~~ 939 (951)
T KOG0207|consen 914 EAETSSSIGQKSESVDLHRGLDDKGR 939 (951)
T ss_pred ccccccccccccccceEEeccccccc
Confidence 2222244455888887776654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-115 Score=1083.22 Aligned_cols=724 Identities=33% Similarity=0.512 Sum_probs=628.7
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (932)
.++.+.++||+|++|++.+|+.+.+.+||.++++++.++++.+... .+. +.+.+.++++||.+.+.+++
T Consensus 99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~---~s~--------~~I~~~I~~~Gy~a~~~~~~ 167 (834)
T PRK10671 99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS---ASP--------QDLVQAVEKAGYGAEAIEDD 167 (834)
T ss_pred ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc---CCH--------HHHHHHHHhcCCCccccccc
Confidence 3678999999999999999999999999999999999999888632 232 56778889999987654321
Q ss_pred CccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHH-HHhhhhhhhhHHHhhhhHH-HHHHHHHHHHhccHHHHH
Q 002354 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHL-SHILGAKASWIHVFHSTGF-HLSLSLFTLLGPGFQLIL 283 (932)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~g~~~~~ 283 (932)
..... ..+...++ ..++..+++.++++++++.++..+ ..++...+.+. ..|+ .+++++|+++|+|||||+
T Consensus 168 ~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~ 239 (834)
T PRK10671 168 AKRRE-RQQETAQA---TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNR----SLWLVIGLITLAVMVFAGGHFYR 239 (834)
T ss_pred cchhh-hhhhhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccch----hHHHHHHHHHHHHHHHhhHHHHH
Confidence 11100 00000011 112233466777666554443221 10000001111 1244 356788999999999999
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhcc----ccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhc
Q 002354 284 DGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVP----KLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLG 359 (932)
Q Consensus 284 ~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~----~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~ 359 (932)
+||++|+++.+|||+|+++|++++|++|++..+.+ ..+.+.||++++++++|+++|+|+|.+++.|+.+.+++|.+
T Consensus 240 ~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~ 319 (834)
T PRK10671 240 SAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLD 319 (834)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999876542 11225699999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeee
Q 002354 360 ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINL 439 (932)
Q Consensus 360 ~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~ 439 (932)
+.|++++++++ |++++|+.++|+|||+|+|++||+||+||+|++|++.||||+|||||.|+.|++||.||+||+|.
T Consensus 320 l~p~~a~~~~~----~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~ 395 (834)
T PRK10671 320 LTPPTARVVTD----EGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQ 395 (834)
T ss_pred cCCCEEEEEeC----CcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCCCCEecCCCCEEEecceec
Confidence 99999999976 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHH
Q 002354 440 NGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSL 519 (932)
Q Consensus 440 ~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~ 519 (932)
+|.++++|+++|.+|.+++|++++++++.+|+++|+.+|+++.+|+|++++++++++++|++.+.. ..|..
T Consensus 396 ~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~---------~~~~~ 466 (834)
T PRK10671 396 DGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPA---------PQIVY 466 (834)
T ss_pred ceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------hHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765421 12456
Q ss_pred HHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCC
Q 002354 520 ALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 599 (932)
Q Consensus 520 ~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~ 599 (932)
++.+++++|+++|||||++++|+++..++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++...
T Consensus 467 ~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~----- 541 (834)
T PRK10671 467 TLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF----- 541 (834)
T ss_pred HHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc-----
Confidence 788999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHh
Q 002354 600 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLR 679 (932)
Q Consensus 600 ~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~ 679 (932)
++.++.+++.+++++|..+.||+++||+++++.... ....+++..+|+|+.+.+++..+.+|+++++.
T Consensus 542 --------~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~~----~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~ 609 (834)
T PRK10671 542 --------NGVDEAQALRLAAALEQGSSHPLARAILDKAGDMTL----PQVNGFRTLRGLGVSGEAEGHALLLGNQALLN 609 (834)
T ss_pred --------CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCC----CCcccceEecceEEEEEECCEEEEEeCHHHHH
Confidence 345678899999999999999999999998864322 22357889999999999999999999999998
Q ss_pred hcCCCCchhh-hHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002354 680 SHGVDTSTFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 680 ~~~~~~~~~~-~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi 758 (932)
+.+....... ..+..+.+|.+++++++|++++|++.+.|++||+++++|++|++.|++++|+|||+..++..+++++||
T Consensus 610 ~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 610 EQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred HcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 7665432222 223345678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 759 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 759 ~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
+ ++++++.|++|.++++.++++++.|+|+|||.||++|++.||+||+||++++.++++||++++++++++|.+++++|
T Consensus 690 ~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~ 767 (834)
T PRK10671 690 D--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAIS 767 (834)
T ss_pred C--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 7 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhcc
Q 002354 839 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRL 900 (932)
Q Consensus 839 R~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~ 900 (932)
|+++++|+||+.|++.||+++||+|+|+++|.+|+.++|++|+++|.+||++|++||+||++
T Consensus 768 r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 829 (834)
T PRK10671 768 RATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLR 829 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcC
Confidence 99999999999999999999999999999998897899999999999999999999999964
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-113 Score=1038.89 Aligned_cols=687 Identities=29% Similarity=0.416 Sum_probs=595.2
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
..+..++++||+|++|++.+|+.+.+.+||.++++++.++++.+.|++... +.+.+.++++||++.+.++
T Consensus 52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~----------~~I~~aI~~~Gy~a~~~~~ 121 (741)
T PRK11033 52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR----------AQVESAVQKAGFSLRDEQA 121 (741)
T ss_pred CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch----------HHHHHHHHhcccccccccc
Confidence 456789999999999999999999999999999999999999999876421 4567788899998764432
Q ss_pred CCccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHH
Q 002354 205 GTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILD 284 (932)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 284 (932)
... + .+.+ .++ ..++.+. + +..++..+ .+....+. ..|+.++++ .++.|||||++
T Consensus 122 ~~~-------~-~~~~--~~~--~~~~~~~--~-~~~~~~~~--~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~ 176 (741)
T PRK11033 122 AAA-------A-PESR--LKS--ENLPLIT--L-AVMMAISW--GLEQFNHP-----FGQLAFIAT---TLVGLYPIARK 176 (741)
T ss_pred hhh-------h-HHHH--HHH--HHHHHHH--H-HHHHHHHH--HHhhhhhH-----HHHHHHHHH---HHHHHHHHHHH
Confidence 110 0 0000 111 1112211 1 11111111 00000010 013334333 35678999999
Q ss_pred HHHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCC
Q 002354 285 GVKSLFKGAP-NMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS 363 (932)
Q Consensus 285 a~~~l~~~~~-nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~ 363 (932)
||++++++++ |||+|++++++++++++. |++++|+++|+++|+++|.++++|+++.+++|+++.|.
T Consensus 177 a~~~l~~~~~~~~~~L~~~a~~~a~~~~~-------------~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~ 243 (741)
T PRK11033 177 ALRLIRSGSPFAIETLMSVAAIGALFIGA-------------TAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPE 243 (741)
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHHcc-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999885 999999999999987652 45788999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcE
Q 002354 364 KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTL 443 (932)
Q Consensus 364 ~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~ 443 (932)
+++++|+ |++++|++++|+|||+|+|++||+||+||+|++|++.||||+|||||.|+.|++||.||+||+|.+|.+
T Consensus 244 ~a~vir~----g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~ 319 (741)
T PRK11033 244 TATRLRD----GEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRLV 319 (741)
T ss_pred EEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeeccCCEEcCceE
Confidence 9999976 588999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHH
Q 002354 444 TVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQL 523 (932)
Q Consensus 444 ~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ 523 (932)
+++|+++|.+|.++||.+++++++.+++|+|+.+|+++++|+|+++++++++|++|+++. +.+|..++.+
T Consensus 320 ~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----------~~~~~~~i~~ 389 (741)
T PRK11033 320 TLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----------AAPWQEWIYR 389 (741)
T ss_pred EEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985542 1346778999
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCC
Q 002354 524 SCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSK 603 (932)
Q Consensus 524 ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~ 603 (932)
++++|+++|||+|++++|+++..++.+++|+||++|+++++|+++++|+||||||||||+|+|+|.+++..
T Consensus 390 a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~--------- 460 (741)
T PRK11033 390 GLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA--------- 460 (741)
T ss_pred HHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCC
Q 002354 604 QNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGV 683 (932)
Q Consensus 604 ~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~ 683 (932)
+++++++++.+++++|.++.||+++||+++++..+... ...++++..+|+|+.+.+++..+.+|+++++.+..
T Consensus 461 ----~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~- 533 (741)
T PRK11033 461 ----TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAI--PEAESQRALAGSGIEGQVNGERVLICAPGKLPPLA- 533 (741)
T ss_pred ----CCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC--CCCcceEEEeeEEEEEEECCEEEEEecchhhhhcc-
Confidence 34567889999999999999999999999998876642 23467788899999999999999999999986521
Q ss_pred CCchhhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCce
Q 002354 684 DTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKV 763 (932)
Q Consensus 684 ~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v 763 (932)
.......+..+.+|.+++++++|++++|++.|+|++|++++++|++|+++|++++|+|||+..++..+|+++||+ +
T Consensus 534 -~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---~ 609 (741)
T PRK11033 534 -DAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---F 609 (741)
T ss_pred -HHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---e
Confidence 111122234556789999999999999999999999999999999999999999999999999999999999995 7
Q ss_pred ecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 002354 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMK 843 (932)
Q Consensus 764 ~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 843 (932)
++++.|+||.++|+.+|+. +.|+|||||+||+|||+.|||||+||++++.++++||+++.++++..+++++++||++++
T Consensus 610 ~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~ 688 (741)
T PRK11033 610 RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHA 688 (741)
T ss_pred ecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999965 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccc
Q 002354 844 TVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 901 (932)
Q Consensus 844 ~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~ 901 (932)
+||||+.|+++||++++|+|+.+ .++||+|+++|.+||++|++||+|+.++
T Consensus 689 ~I~~nl~~a~~~n~~~i~~a~~g-------~~~~~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 689 NIRQNITIALGLKAIFLVTTLLG-------ITGLWLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999999999999743 3689999999999999999999998754
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-101 Score=911.29 Aligned_cols=558 Identities=45% Similarity=0.700 Sum_probs=521.6
Q ss_pred ccHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccc----cccchhhhhHHHHHHHHHHHHHHHHHHHHHhHH
Q 002354 277 PGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPK----LGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATS 352 (932)
Q Consensus 277 ~g~~~~~~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~----~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~ 352 (932)
+|||||++||+++++|++|||+|++++++++|++|+|.++.+. .+++.||++++++++++++|+++|.++++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999887642 234679999999999999999999999999999
Q ss_pred HHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCcc
Q 002354 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (932)
Q Consensus 353 ~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V 432 (932)
.+++|.++.|+++++++++ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||.|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~---~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd~V 157 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKD---GSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPV 157 (562)
T ss_pred HHHHHHhcCCCEEEEEECC---CeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCCEE
Confidence 9999999999999999864 4678999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhc
Q 002354 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQ 512 (932)
Q Consensus 433 ~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~ 512 (932)
|+||+|.+|.++++|+++|.+|.++||.+++++++.+|+|+|+.+|+++++|+++++++++++|++|.
T Consensus 158 ~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------ 225 (562)
T TIGR01511 158 IAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------ 225 (562)
T ss_pred EeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999999888773
Q ss_pred cCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEE
Q 002354 513 YGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVV 592 (932)
Q Consensus 513 ~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~ 592 (932)
.++.+++++|+++|||+|++++|+++..++.+++++||++|+++++|+++++|+||||||||||+|+|+|.++.
T Consensus 226 ------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~ 299 (562)
T TIGR01511 226 ------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVH 299 (562)
T ss_pred ------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEe
Confidence 26778999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEe
Q 002354 593 TSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSV 672 (932)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~ 672 (932)
+. ++.++++++.+++++|+++.||+++||+++++..+.... ...++++.+|+|+.+.++++++.+
T Consensus 300 ~~-------------~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~--~~~~~~~~~g~Gi~~~~~g~~~~i 364 (562)
T TIGR01511 300 VF-------------GDRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGITLV--EVSDFKAIPGIGVEGTVEGTKIQL 364 (562)
T ss_pred cC-------------CCCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcC--CCCCeEEECCceEEEEECCEEEEE
Confidence 65 345578899999999999999999999999987765422 235788999999999999999999
Q ss_pred ecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 002354 673 GTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 752 (932)
Q Consensus 673 Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~i 752 (932)
|+++++.+.+..... .+.++.++++++.|++++|.+.++|++||+++++|++|+++|++++|+|||+..+++.+
T Consensus 365 G~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~i 438 (562)
T TIGR01511 365 GNEKLLGENAIKIDG------KAEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV 438 (562)
T ss_pred ECHHHHHhCCCCCCh------hhhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 999999876653211 22468899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH
Q 002354 753 ASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 753 a~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
++++|++ +++++.|++|.++++.++++++.|+|+|||.||++|+++||+||+||++++.+++.||+++.++++..++
T Consensus 439 a~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~ 515 (562)
T TIGR01511 439 AKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVA 515 (562)
T ss_pred HHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHH
Confidence 9999995 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHH
Q 002354 833 VALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 880 (932)
Q Consensus 833 ~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~a 880 (932)
+++++||+++++|+||+.|+++||+++||+|+++++|+ |+.++|++|
T Consensus 516 ~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~-g~~~~p~~a 562 (562)
T TIGR01511 516 TAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPI-GILLSPAVA 562 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-ccccCCCcC
Confidence 99999999999999999999999999999999999886 778999864
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=834.71 Aligned_cols=533 Identities=39% Similarity=0.565 Sum_probs=497.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCC
Q 002354 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (932)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g 375 (932)
||+|++++++.+++++ .||+. +++++++++++++|.++++|+.+.+++|.++.|.+++|+|+ |
T Consensus 1 ~~~l~~~a~~~~~~~~------------~~~~~-~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~----g 63 (536)
T TIGR01512 1 VDLLMALAALGAVAIG------------EYLEG-ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRG----G 63 (536)
T ss_pred CcHHHHHHHHHHHHHh------------hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEC----C
Confidence 7999999999999876 24544 78889999999999999999999999999999999999987 5
Q ss_pred cEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcch
Q 002354 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (932)
Q Consensus 376 ~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~ 455 (932)
+++++++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||.+.+|.++++|++||.+|.
T Consensus 64 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~ 143 (536)
T TIGR01512 64 SLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADST 143 (536)
T ss_pred EEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhc
Q 002354 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCA 535 (932)
Q Consensus 456 ~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~a 535 (932)
+|||.+++++++.+++|+|+.+++++.+|++++++++++++++|+++.. +..++.+++++++++|||+
T Consensus 144 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~svlv~~~P~a 211 (536)
T TIGR01512 144 IAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------------WPFWVYRALVLLVVASPCA 211 (536)
T ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------cHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999999998888765431 1237888999999999999
Q ss_pred chhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 002354 536 LGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEI 615 (932)
Q Consensus 536 L~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~l 615 (932)
|++++|+++..++.+++++||++|+++++|+++++|++|||||||||+|+|+|.++++ .++
T Consensus 212 L~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------------------~~~ 272 (536)
T TIGR01512 212 LVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------------------AEV 272 (536)
T ss_pred cccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------------------HHH
Confidence 9999999999999999999999999999999999999999999999999999998863 268
Q ss_pred HHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhhhHHHHH
Q 002354 616 LKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMED 695 (932)
Q Consensus 616 l~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~~~~~~~ 695 (932)
+++++++|.++.||+++||++++++.+ ...++.+.+++|+.+.+++.++.+|+++++.+.+.. ..+
T Consensus 273 l~~a~~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~--------~~~ 338 (536)
T TIGR01512 273 LRLAAAAEQASSHPLARAIVDYARKRE------NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA--------RPE 338 (536)
T ss_pred HHHHHHHhccCCCcHHHHHHHHHHhcC------CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc--------chh
Confidence 999999999999999999999988754 235677889999999999999999999998775532 223
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHH
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKR 774 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~ 774 (932)
.++.+.++++.|+.+.|.+.++|++||+++++|++|+++|+ +++|+|||+..++..+++++|++ ++|+++.|++|.+
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~ 416 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELLPEDKLE 416 (536)
T ss_pred hCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCcHHHHH
Confidence 45778999999999999999999999999999999999999 99999999999999999999997 7899999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 775 FINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAF 853 (932)
Q Consensus 775 ~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~ 853 (932)
+++.++++++.|+|+|||.||++|++.||+||++| ++++.+++.||+++.++++..+.+++++||+++++|+||+.|++
T Consensus 417 ~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~ 496 (536)
T TIGR01512 417 IVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIAL 496 (536)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhc
Q 002354 854 GYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 899 (932)
Q Consensus 854 ~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~ 899 (932)
.||+++||+|+.+ +++||+|+++|.+||++|++||+|++
T Consensus 497 ~~n~~~i~~a~~G-------~~~p~~aa~~m~~ss~~v~~ns~r~~ 535 (536)
T TIGR01512 497 GIILLLILLALFG-------VLPLWLAVLGHEGSTVLVILNALRLL 535 (536)
T ss_pred HHHHHHHHHHHHh-------hccHHHHHHHHcChHHHHHHHHHhhc
Confidence 9999999999743 48999999999999999999999985
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-92 Score=836.65 Aligned_cols=551 Identities=44% Similarity=0.678 Sum_probs=505.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCC
Q 002354 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (932)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g 375 (932)
||+|++++++.+|++|. |.+++++++++++++++|.++++|+++.+++|.+..|.+++++|++ |
T Consensus 1 ~d~l~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~---g 64 (556)
T TIGR01525 1 MDLLMALATIAAYAMGL-------------VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGD---G 64 (556)
T ss_pred CcHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECC---C
Confidence 89999999999999874 3467899999999999999999999999999999999999999873 3
Q ss_pred cEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcch
Q 002354 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (932)
Q Consensus 376 ~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~ 455 (932)
++++|+.++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|+
T Consensus 65 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~ 144 (556)
T TIGR01525 65 SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDST 144 (556)
T ss_pred eEEEEEHHHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhc
Q 002354 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCA 535 (932)
Q Consensus 456 ~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~a 535 (932)
+|+|.+++++++.+++|+|+.+++++.+|+++++++++++|++|++.+. . .++.+++++++++|||+
T Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----------~--~~~~~~~~vlv~~~P~a 211 (556)
T TIGR01525 145 LAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----------L--GALYRALAVLVVACPCA 211 (556)
T ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------c--hHHHHHHHHHhhccccc
Confidence 9999999999999999999999999999999999999999999876532 1 57889999999999999
Q ss_pred chhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 002354 536 LGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEI 615 (932)
Q Consensus 536 L~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~l 615 (932)
|++++|+++..++.+++++||++|+++++|+++++|++|||||||||+|+|+|.++...+.. ..+++++
T Consensus 212 l~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------~~~~~~~ 280 (556)
T TIGR01525 212 LGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA-----------SISEEEL 280 (556)
T ss_pred hhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC-----------CccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999865210 0126788
Q ss_pred HHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCC-CeEEecCCeeEEEEcC-eEEEeecHHHHhhcCCCCchh-hhHH
Q 002354 616 LKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADG-TFIEEPGSGTVAIIED-RKVSVGTIDWLRSHGVDTSTF-QEVE 692 (932)
Q Consensus 616 l~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~-~~~~~~g~g~~~~i~~-~~~~~Gs~~~i~~~~~~~~~~-~~~~ 692 (932)
+.+++.+|.++.||+++||+++++..+.+... . ++.+.+++|+.+.+++ .++.+|+++++.......... +..+
T Consensus 281 l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~---~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~ 357 (556)
T TIGR01525 281 LALAAALEQSSSHPLARAIVRYAKKRGLELPK---QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLN 357 (556)
T ss_pred HHHHHHHhccCCChHHHHHHHHHHhcCCCccc---ccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHH
Confidence 99999999999999999999999887654221 3 6778899999999999 799999999984322221111 1222
Q ss_pred HHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhh
Q 002354 693 MEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771 (932)
Q Consensus 693 ~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~ 771 (932)
....++.++++++.|++++|.+.++|+++|+++++|++|+++| ++++|+|||+..++..+++++|++ ++|+++.|++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~~p~~ 435 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAELLPED 435 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccCCHHH
Confidence 3456788999999999999999999999999999999999999 999999999999999999999997 8999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWW 851 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~ 851 (932)
|.++++.+++.++.|+|+|||.||++|+++||+||++|++++.+++.||+++.++++..+.+++++||+++++|+||+.|
T Consensus 436 K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~ 515 (556)
T TIGR01525 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAW 515 (556)
T ss_pred HHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccccccHH-HHHHHhhhhHHHHHHHhhhh
Q 002354 852 AFGYNIVGIPIAAGVLLPVTGTMLTPS-IAGALMGLSSIGVMANSLLL 898 (932)
Q Consensus 852 a~~~N~i~i~la~~~~~~~~g~~l~P~-~aa~~m~~ssl~v~lnsl~l 898 (932)
+++||++++++|+++ +++|+ +|+++|.+||++|++||+|+
T Consensus 516 a~~~N~~~i~~a~~g-------~~~p~~~aa~~m~~ss~~v~lns~r~ 556 (556)
T TIGR01525 516 ALGYNLVAIPLAAGG-------LLPLWLLAVLLHEGSTVLVVLNSLRL 556 (556)
T ss_pred HHHHHHHHHHHHHHH-------hcCHHHHHHHHHhchHHHHHHHhhcC
Confidence 999999999999865 37896 99999999999999999985
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=838.12 Aligned_cols=507 Identities=24% Similarity=0.299 Sum_probs=446.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe
Q 002354 328 EPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407 (932)
Q Consensus 328 ~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~ 407 (932)
++++++++++++..++.++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++
T Consensus 57 ~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~ 132 (755)
T TIGR01647 57 DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRD----GKWQEIPASELVPGDVVRLKIGDIVPADCRLFE 132 (755)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC----CEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe
Confidence 4566777788888889999999999999999999999999987 589999999999999999999999999999999
Q ss_pred ee-eEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHH
Q 002354 408 GR-STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (932)
Q Consensus 408 G~-~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~ 486 (932)
|+ +.||||+|||||.|+.|.+||.+|+||.+.+|+++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.++++
T Consensus 133 g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~ 212 (755)
T TIGR01647 133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIV 212 (755)
T ss_pred cCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHH
Confidence 98 99999999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHh
Q 002354 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEK 566 (932)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~ 566 (932)
++++++++++++|++.. +.+|..++.+++++++++|||+|++++|+++..+..+++|+|+++|+++++|+
T Consensus 213 ~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~ 282 (755)
T TIGR01647 213 LIGVLVLIELVVLFFGR----------GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEE 282 (755)
T ss_pred HHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHh
Confidence 99999888888876521 23567889999999999999999999999999999999999999999999999
Q ss_pred cccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHh-cccCCCcHHHHHHHHHHhcCCcc
Q 002354 567 FAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV-ESNTVHPIGKAIVEAAEFSNCQN 645 (932)
Q Consensus 567 lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~-e~~s~hPi~~Ai~~~a~~~~~~~ 645 (932)
+|++|+||||||||||+|+|+|.+++..+ +++++++++.+++.. +..+.||+++|+++++...+...
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~------------~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~ 350 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILPFF------------NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEAR 350 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEecC------------CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999998752 124567788887755 47789999999999876543100
Q ss_pred ccccCCCeEEe----cCCeeEEEEc----CeE--EEeecHHHHhhcCCCCchh-----hhHHHHHhCCCeEEEEEE----
Q 002354 646 VKVADGTFIEE----PGSGTVAIIE----DRK--VSVGTIDWLRSHGVDTSTF-----QEVEMEDLMNQSLVYVGV---- 706 (932)
Q Consensus 646 ~~~~~~~~~~~----~g~g~~~~i~----~~~--~~~Gs~~~i~~~~~~~~~~-----~~~~~~~~~g~~~~~va~---- 706 (932)
.......+. .+++....++ ++. +.||+++.+.+.|...... +..++...+|.+++++++
T Consensus 351 --~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e 428 (755)
T TIGR01647 351 --DGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEE 428 (755)
T ss_pred --hcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCC
Confidence 000111111 3566666653 433 6799999999988643211 122335667999999998
Q ss_pred -CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------------
Q 002354 707 -DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------ 761 (932)
Q Consensus 707 -~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------ 761 (932)
+.+++|+++|+|++||+++++|++||++||+++|+|||++.+|.++|+++||...
T Consensus 429 ~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~ 508 (755)
T TIGR01647 429 GRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEM 508 (755)
T ss_pred CCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHH
Confidence 2389999999999999999999999999999999999999999999999999641
Q ss_pred ----ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 762 ----KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 762 ----~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
.+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|.|+++||+|+++|++..|++++++
T Consensus 509 ~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~ 588 (755)
T TIGR01647 509 VEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILE 588 (755)
T ss_pred HHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHH
Confidence 2899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 838 SRLTMKTVKQNLWWAFGYNIVGIPI 862 (932)
Q Consensus 838 gR~~~~~i~~nl~~a~~~N~i~i~l 862 (932)
||++++|||||+.|.++.|+..+..
T Consensus 589 gR~~~~ni~k~i~~~~~~n~~~~~~ 613 (755)
T TIGR01647 589 SRKIFQRMKSYVIYRIAETIRIVFF 613 (755)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHH
Confidence 9999999999999999999975543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=793.53 Aligned_cols=493 Identities=25% Similarity=0.315 Sum_probs=419.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccCCC-eEEE-EEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeee
Q 002354 332 LIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARL-LVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (932)
Q Consensus 332 il~~~llg~~le~~~~~ka~~~l~~L~~~~p~-~~~v-ir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~ 409 (932)
+++..+++.|+|.++++|+++.+++|+++.|+ ++++ .|+ |++++|++++|+|||+|.|++||+||+||+|++|+
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rd----g~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~ 147 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQD----GSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL 147 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeC----CEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc
Confidence 33445689999999999999999999999986 7874 444 58899999999999999999999999999999999
Q ss_pred eEEeccccccCCCceeecCC---CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHH
Q 002354 410 STVDESSFTGEPLPVTKIPE---SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (932)
Q Consensus 410 ~~VDES~LTGES~Pv~K~~g---~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~ 486 (932)
+.||||+|||||.|+.|++| +.||+||.+.+|+++++|+++|.+|++|||++++++++.+|+|+|...+.+...+
T Consensus 148 ~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-- 225 (673)
T PRK14010 148 ATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-- 225 (673)
T ss_pred eEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH--
Confidence 99999999999999999999 8899999999999999999999999999999999999999999996655443222
Q ss_pred HHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHh
Q 002354 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEK 566 (932)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~ 566 (932)
.+..+++++|++.... + .++...+...++++++.|||+|+..+|++...++.+++|+|+++|+++++|.
T Consensus 226 ---~ii~l~~~~~~~~~~~------~--~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~ 294 (673)
T PRK14010 226 ---TIIFLVVILTMYPLAK------F--LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVET 294 (673)
T ss_pred ---hHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHH
Confidence 2222222222211000 0 0223456677788888899999999999999999999999999999999999
Q ss_pred cccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccc
Q 002354 567 FAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNV 646 (932)
Q Consensus 567 lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~ 646 (932)
+|++|++|||||||||+|++.+.++.+. ++.+.++++++++.++..+.||+++||+++++..+.+..
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~~~-------------~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~~~ 361 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFIPV-------------KSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLP 361 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEEeC-------------CCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCCch
Confidence 9999999999999999999988887653 334567788888888889999999999999987665421
Q ss_pred cccCC--CeEEe-cCCeeEEEEcCeEEEeecHHHHhhcCCCC----c-hhh-hHHHHHhCCCeEEEEEECCEEEEEEEec
Q 002354 647 KVADG--TFIEE-PGSGTVAIIEDRKVSVGTIDWLRSHGVDT----S-TFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVE 717 (932)
Q Consensus 647 ~~~~~--~~~~~-~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~----~-~~~-~~~~~~~~g~~~~~va~~~~~lG~i~l~ 717 (932)
....+ .|... .++|+ .++++.+.||+++++.+.|... . ..+ ..+..+.+|.++++++.|++++|++.++
T Consensus 362 ~~~~~~~pF~~~~k~~gv--~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~ 439 (673)
T PRK14010 362 QEVGEYIPFTAETRMSGV--KFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLK 439 (673)
T ss_pred hhhcceeccccccceeEE--EECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEee
Confidence 11111 12111 23444 3677889999999998766421 1 111 1233456788999999999999999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAA 797 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~ 797 (932)
|++|||++++|++||++||+++|+|||++.+|.++|+++||+ ++|++++||||.++|+.+|++|+.|+|+|||+||+|
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAP 517 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAP 517 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHH
Confidence 999999999999999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred HHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 798 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 858 (932)
Q Consensus 798 al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i 858 (932)
||++||||||||+|+|.||++||+|+++||+..|.+++++||++|.|+++.+.|.++.|+.
T Consensus 518 ALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 518 ALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred HHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 9999999999999999999999999999999999999999999999999999999998863
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=827.25 Aligned_cols=559 Identities=21% Similarity=0.272 Sum_probs=465.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCC--CCcEEEEeCCCccCCCEEEEcCCCEEeeeEE
Q 002354 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDA--KDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (932)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~--~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgv 404 (932)
..+++++++++++.+++.++++|+++.+++|+++.|.+++|+|+++. +|++++|++++|+|||+|.|++||+|||||+
T Consensus 123 ~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~ 202 (902)
T PRK10517 123 FAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLR 202 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEE
Confidence 35677888899999999999999999999999999999999987321 1578999999999999999999999999999
Q ss_pred EEeee-eEEeccccccCCCceeecCCC-------------ccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCC
Q 002354 405 VRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (932)
Q Consensus 405 ll~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~ 470 (932)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.+++++++.++
T Consensus 203 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~ 282 (902)
T PRK10517 203 ILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEP 282 (902)
T ss_pred EEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCC
Confidence 99996 699999999999999999875 6999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 002354 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSL 550 (932)
Q Consensus 471 ~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~ 550 (932)
+|+|+.+|++++++..++++++.++++++.+.. .+|..++.+++++++++|||+|+++++++++.+..+
T Consensus 283 t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-----------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~ 351 (902)
T PRK10517 283 NAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-----------GDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVK 351 (902)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-----------CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999999999999999888888887777654432 246778999999999999999999999999999999
Q ss_pred hhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHh---cccCC
Q 002354 551 GATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV---ESNTV 627 (932)
Q Consensus 551 ~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~---e~~s~ 627 (932)
++|+|+++|+++++|++|++|+||||||||||+|+|+|.++... .+.++++++++++.. +....
T Consensus 352 mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~-------------~~~~~~~ll~~a~l~~~~~~~~~ 418 (902)
T PRK10517 352 LSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI-------------SGKTSERVLHSAWLNSHYQTGLK 418 (902)
T ss_pred HHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC-------------CCCCHHHHHHHHHhcCCcCCCCC
Confidence 99999999999999999999999999999999999999987532 122346677766542 23457
Q ss_pred CcHHHHHHHHHHhcCCccccccCCCeEEec----CCeeEEEEc---C--eEEEeecHHHHhhcCCCCc------h-----
Q 002354 628 HPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIE---D--RKVSVGTIDWLRSHGVDTS------T----- 687 (932)
Q Consensus 628 hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~---~--~~~~~Gs~~~i~~~~~~~~------~----- 687 (932)
||++.|++++++..+..........+.+.| .+++...+. + ..+.||+++.+.+.|.... +
T Consensus 419 ~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~ 498 (902)
T PRK10517 419 NLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIM 498 (902)
T ss_pred CHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHH
Confidence 999999999887543111111112223333 334444332 2 3488999999998875321 0
Q ss_pred hhh----HHHHHhCCCeEEEEEE----------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHH
Q 002354 688 FQE----VEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 747 (932)
Q Consensus 688 ~~~----~~~~~~~g~~~~~va~----------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~ 747 (932)
.++ .+....+|.+++++++ |++|+|+++|+|++||+++++|++|+++||+++|+|||++.
T Consensus 499 ~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 578 (902)
T PRK10517 499 LRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL 578 (902)
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 001 1234567999999885 56899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC-----------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe
Q 002354 748 SAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI 804 (932)
Q Consensus 748 ~a~~ia~~~gi~~~-----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v 804 (932)
+|.++|+++||+.+ .+|+|++|+||.++|+.||++|++|+|+|||+||+|||++|||
T Consensus 579 tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADV 658 (902)
T PRK10517 579 VAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADI 658 (902)
T ss_pred HHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCE
Confidence 99999999999631 7999999999999999999999999999999999999999999
Q ss_pred eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHh
Q 002354 805 GVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALM 884 (932)
Q Consensus 805 gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m 884 (932)
|||||+|+|.||++||+|+++||+..|++++++||++++||+|++.|.++.|+..+...+...+ +.+ ..|+.+..++
T Consensus 659 GIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~-~~~--~~pl~~~qiL 735 (902)
T PRK10517 659 GISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASA-FLP--FLPMLPLHLL 735 (902)
T ss_pred EEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-Hhh--hhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999865443322111 011 2477777777
Q ss_pred hhhHHHHHHHhhhhccccccccccccCCCCC
Q 002354 885 GLSSIGVMANSLLLRLKFSSKQKASFQAPSS 915 (932)
Q Consensus 885 ~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~ 915 (932)
+..-+.. +.++.|. ..+..++.+++||+
T Consensus 736 ~inl~~D-~~~~al~--~d~~~~~~m~~p~r 763 (902)
T PRK10517 736 IQNLLYD-VSQVAIP--FDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHHHH-HhHHhhc--CCCCChhhhcCCCC
Confidence 7766666 4455554 44555556788887
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=787.76 Aligned_cols=512 Identities=26% Similarity=0.362 Sum_probs=432.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCC-eEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEE
Q 002354 328 EPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (932)
Q Consensus 328 ~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~-~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll 406 (932)
..+.+++.++++.++|.++++|+++.+++|+++.|+ +++|+|++ +++++|++++|++||+|.|++||+||+||+|+
T Consensus 68 i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g---~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi 144 (679)
T PRK01122 68 ITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREP---GAAEEVPATELRKGDIVLVEAGEIIPADGEVI 144 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECC---CEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE
Confidence 345566668899999999999999999999999886 79999863 23889999999999999999999999999999
Q ss_pred eeeeEEeccccccCCCceeecCCCc---cccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhh
Q 002354 407 AGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483 (932)
Q Consensus 407 ~G~~~VDES~LTGES~Pv~K~~g~~---V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~ 483 (932)
+|.+.||||+|||||.|+.|++|+. ||+||.|.+|.++++|+++|.+|.++||++++++++.+|+|+|...+.+..+
T Consensus 145 eG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~ 224 (679)
T PRK01122 145 EGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAG 224 (679)
T ss_pred EccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHh
Confidence 9999999999999999999999998 9999999999999999999999999999999999999999999888877666
Q ss_pred HHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchH
Q 002354 484 FTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNI 563 (932)
Q Consensus 484 ~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~ 563 (932)
++.+.+++++..+.++++.+ .+ .++..++++++++|||+|+..+|++...++.+++|+|+++|++++
T Consensus 225 l~~i~l~~~~~~~~~~~~~g-----------~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~a 291 (679)
T PRK01122 225 LTIIFLLVVATLPPFAAYSG-----------GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRA 291 (679)
T ss_pred hhHHHHHHHHHHHHHHHHhC-----------ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchH
Confidence 65444433333222221111 12 267888999999999999999999999999999999999999999
Q ss_pred HHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHh-cC
Q 002354 564 LEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEF-SN 642 (932)
Q Consensus 564 lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~-~~ 642 (932)
+|.+|++|+||||||||||+|+|++.++++. ++.++++++.+++.++..+.||.++||+++++. .+
T Consensus 292 vE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~~~~~ 358 (679)
T PRK01122 292 VEAAGDVDTLLLDKTGTITLGNRQASEFLPV-------------PGVTEEELADAAQLSSLADETPEGRSIVVLAKQRFN 358 (679)
T ss_pred HHHhcCCCEEEEeCCCCCcCCcEEEEEEEeC-------------CCCCHHHHHHHHHHhcCCCCCchHHHHHHHHHhhcC
Confidence 9999999999999999999999999998865 345677899999999999999999999999876 23
Q ss_pred Ccccccc--CCCe-EEecCCeeEEE-EcCeEEEeecHHHHhhcCCC----Cc-hh-hhHHHHHhCCCeEEEEEECCEEEE
Q 002354 643 CQNVKVA--DGTF-IEEPGSGTVAI-IEDRKVSVGTIDWLRSHGVD----TS-TF-QEVEMEDLMNQSLVYVGVDNMLAG 712 (932)
Q Consensus 643 ~~~~~~~--~~~~-~~~~g~g~~~~-i~~~~~~~Gs~~~i~~~~~~----~~-~~-~~~~~~~~~g~~~~~va~~~~~lG 712 (932)
....... ..++ .+...++.++. ++++.+.||+++.+.+.|.. .. .. +..+..+.+|.++++++.|++++|
T Consensus 359 ~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~~~lG 438 (679)
T PRK01122 359 LRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNRVLG 438 (679)
T ss_pred CCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECCeEEE
Confidence 3211100 1111 22223344443 67889999999988765521 11 11 112334567899999999999999
Q ss_pred EEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCC
Q 002354 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDG 792 (932)
Q Consensus 713 ~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg 792 (932)
++.++|++|||++++|++||++||+++|+|||++.+|.++|+++||+ +++++++||||.++|+.+|++|+.|+|+|||
T Consensus 439 ~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDG 516 (679)
T PRK01122 439 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEGRLVAMTGDG 516 (679)
T ss_pred EEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 99999999999999999999999999999999999999999999997 7999999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-----HHHHHHhhh
Q 002354 793 INDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN-LWWAFGYNI-----VGIPIAAGV 866 (932)
Q Consensus 793 ~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~n-l~~a~~~N~-----i~i~la~~~ 866 (932)
+||+|||++||||||||+|+|.||++||+|+++||+..|.+++++||+++-+ |.. -.|++. |- ..+|..+..
T Consensus 517 vNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~t-r~~~~~f~~~-n~~~~~~~i~p~~~~~ 594 (679)
T PRK01122 517 TNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMT-RGALTTFSIA-NDVAKYFAIIPAMFAA 594 (679)
T ss_pred cchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhh-hHhhhhhhHH-HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999944 444 455554 53 456666666
Q ss_pred hhcccc
Q 002354 867 LLPVTG 872 (932)
Q Consensus 867 ~~~~~g 872 (932)
.||-.+
T Consensus 595 ~~~~~~ 600 (679)
T PRK01122 595 TYPQLN 600 (679)
T ss_pred hCcccc
Confidence 677654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-87 Score=824.86 Aligned_cols=557 Identities=21% Similarity=0.274 Sum_probs=461.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecC--CCCcEEEEeCCCccCCCEEEEcCCCEEeeeEE
Q 002354 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (932)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~--~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgv 404 (932)
..+++++++++++.+++.++++|+++++++|.++.+.+++|+|+-. .+|++++|+++||+|||+|.|++||+|||||+
T Consensus 89 ~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ 168 (867)
T TIGR01524 89 EATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADAR 168 (867)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEE
Confidence 3556677788888889999999999999999999999999998210 02689999999999999999999999999999
Q ss_pred EEeee-eEEeccccccCCCceeecCCC-------------ccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCC
Q 002354 405 VRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (932)
Q Consensus 405 ll~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~ 470 (932)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|||.+++++ ...+
T Consensus 169 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~ 247 (867)
T TIGR01524 169 VISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQ 247 (867)
T ss_pred EEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCC
Confidence 99997 699999999999999999875 59999999999999999999999999999999988 7778
Q ss_pred ChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 002354 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSL 550 (932)
Q Consensus 471 ~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~ 550 (932)
+|+|+.++++++++.+++++++.+++++|.+.. .+|..++.+++++++++|||+|++++|+++..+..+
T Consensus 248 t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ 316 (867)
T TIGR01524 248 TAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-----------GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAIN 316 (867)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-----------CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 999999999999999998888888877765432 246778999999999999999999999999999999
Q ss_pred hhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH---hcccCC
Q 002354 551 GATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAG---VESNTV 627 (932)
Q Consensus 551 ~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~---~e~~s~ 627 (932)
++|+|+++|+++++|++|++|+||||||||||+|+|+|.+++.. .+.+.++++.+++. .+..+.
T Consensus 317 mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~-------------~~~~~~~~l~~a~l~~~~~~~~~ 383 (867)
T TIGR01524 317 MSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS-------------SGETSERVLKMAWLNSYFQTGWK 383 (867)
T ss_pred HHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC-------------CCCCHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999998643 22335667776653 233457
Q ss_pred CcHHHHHHHHHHhcCCccccccCCCeEEec----CCeeEEEEcC-----eEEEeecHHHHhhcCCCCc------h-----
Q 002354 628 HPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIED-----RKVSVGTIDWLRSHGVDTS------T----- 687 (932)
Q Consensus 628 hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~~-----~~~~~Gs~~~i~~~~~~~~------~----- 687 (932)
||+++|+++++..............+.+.| ++++...+++ ..+.||+++.+.+.|.... .
T Consensus 384 ~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~ 463 (867)
T TIGR01524 384 NVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESE 463 (867)
T ss_pred ChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHH
Confidence 999999999887532211111112233344 4555555543 3489999999988775320 0
Q ss_pred hh----hHHHHHhCCCeEEEEEE----------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHH
Q 002354 688 FQ----EVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 747 (932)
Q Consensus 688 ~~----~~~~~~~~g~~~~~va~----------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~ 747 (932)
.+ ..+.++.+|.+++++++ |++++|+++|+|++|++++++|++|+++||+++|+|||+..
T Consensus 464 ~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~ 543 (867)
T TIGR01524 464 KSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEI 543 (867)
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 01 11224567899999886 23799999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC-----------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe
Q 002354 748 SAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI 804 (932)
Q Consensus 748 ~a~~ia~~~gi~~~-----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v 804 (932)
+|.++|+++||..+ .+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++|||
T Consensus 544 tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdV 623 (867)
T TIGR01524 544 VTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADV 623 (867)
T ss_pred HHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCE
Confidence 99999999999621 7999999999999999999999999999999999999999999
Q ss_pred eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccccccHHHHHHH
Q 002354 805 GVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGTMLTPSIAGAL 883 (932)
Q Consensus 805 gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~~~g~~l~P~~aa~~ 883 (932)
|||||+|+|.||++||+|+++|++..|++++++||++++|||||+.|.++.|+..+...+ +.++ . ...|+.+..+
T Consensus 624 GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~--~--~~~pl~~~qi 699 (867)
T TIGR01524 624 GISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF--I--PFLPMLSLHL 699 (867)
T ss_pred EEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH--h--hhhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999988875443322 1111 1 1247777777
Q ss_pred hhhhHHHHHHHhhhhccccccccccccCCCCC
Q 002354 884 MGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 915 (932)
Q Consensus 884 m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~ 915 (932)
..+.-+.. +.++.|. ..+...+.+++||+
T Consensus 700 l~inl~~d-~~~~al~--~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 700 LIQNLLYD-FSQLTLP--WDKMDREFLKKPHQ 728 (867)
T ss_pred HHHHHHHH-HHHHhhc--CCCCChHhhCCCCC
Confidence 77766666 5566664 44555555676666
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-86 Score=823.28 Aligned_cols=568 Identities=21% Similarity=0.267 Sum_probs=464.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecC--CCCcEEEEeCCCccCCCEEEEcCCCEEeeeE
Q 002354 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (932)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~--~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDg 403 (932)
|..+++++++++++.+++.++++|+++++++|+++.|.+++|+|++. .+|++++|++++|+|||+|.|++||+|||||
T Consensus 111 ~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg 190 (903)
T PRK15122 111 LTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADV 190 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeE
Confidence 34566777888899999999999999999999999999999998731 1257899999999999999999999999999
Q ss_pred EEEeee-eEEeccccccCCCceeecC-----------------------CCccccceeeecCcEEEEEEecCCcchHHHH
Q 002354 404 VVRAGR-STVDESSFTGEPLPVTKIP-----------------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDI 459 (932)
Q Consensus 404 vll~G~-~~VDES~LTGES~Pv~K~~-----------------------g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki 459 (932)
+|++|+ +.||||+|||||.|+.|.+ ++.||+||.+.+|.++++|++||.+|.+|||
T Consensus 191 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI 270 (903)
T PRK15122 191 RLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270 (903)
T ss_pred EEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHH
Confidence 999997 5899999999999999975 2679999999999999999999999999999
Q ss_pred HHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhh
Q 002354 460 VRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLA 539 (932)
Q Consensus 460 ~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la 539 (932)
.+++++ ...++|+|+.++++++++..+.+.++.+++++..+. +.+|..++.+++++++++|||+|+++
T Consensus 271 ~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-----------~~~~~~~l~~aisl~V~~~Pe~Lp~~ 338 (903)
T PRK15122 271 AKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-----------KGDWLEALLFALAVAVGLTPEMLPMI 338 (903)
T ss_pred HHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----------cCCHHHHHHHHHHHHHHHccchHHHH
Confidence 999987 566789999999999887776666555554443221 23567889999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 002354 540 TPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFA 619 (932)
Q Consensus 540 ~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~la 619 (932)
+|++++.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.. ++.++++++.++
T Consensus 339 vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~-------------~~~~~~~~l~~a 405 (903)
T PRK15122 339 VSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDV-------------SGRKDERVLQLA 405 (903)
T ss_pred HHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcC-------------CCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998754 122345667666
Q ss_pred HHh---cccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeE---EEE----cCe--EEEeecHHHHhhcCCCCc-
Q 002354 620 AGV---ESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTV---AII----EDR--KVSVGTIDWLRSHGVDTS- 686 (932)
Q Consensus 620 a~~---e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~---~~i----~~~--~~~~Gs~~~i~~~~~~~~- 686 (932)
+.. +..+.||+++|+++++...+..........+.+.|+.+.. ..+ +++ .+.||+++.+.+.|....
T Consensus 406 ~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~ 485 (903)
T PRK15122 406 WLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD 485 (903)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc
Confidence 532 3446799999999999876543111122344555554432 221 333 377899999988875321
Q ss_pred -----hh---------hhHHHHHhCCCeEEEEEE------------------CCEEEEEEEecccccHHHHHHHHHHHhC
Q 002354 687 -----TF---------QEVEMEDLMNQSLVYVGV------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQ 734 (932)
Q Consensus 687 -----~~---------~~~~~~~~~g~~~~~va~------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~ 734 (932)
+. +..+.++.+|.+++++++ |++|+|+++|+|++||+++++|++||++
T Consensus 486 ~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~a 565 (903)
T PRK15122 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALREN 565 (903)
T ss_pred CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHC
Confidence 00 012234567899999884 3589999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------------ceecccChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 735 GIGVYMLSGDKKNSAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 735 Gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
||+++|+|||++.+|.++|+++||..+ .+|+|++|+||.++|+.||++|+.|+|+||
T Consensus 566 GI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGD 645 (903)
T PRK15122 566 GVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGD 645 (903)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECC
Confidence 999999999999999999999999621 699999999999999999999999999999
Q ss_pred CcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcc
Q 002354 792 GINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPV 870 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~~ 870 (932)
|+||+|||++||||||||+|+|.||++||+|+++||+..|++++++||++++||++++.|.++.|+..+...+ +.++
T Consensus 646 GvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~-- 723 (903)
T PRK15122 646 GINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF-- 723 (903)
T ss_pred CchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999999999999999999875543322 1111
Q ss_pred ccccccHHHHHHHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCcccccc
Q 002354 871 TGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 926 (932)
Q Consensus 871 ~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 926 (932)
+ ...|+.+..+.+..-+.-. .++.|. ..++..+.+ +||++.+....++.+
T Consensus 724 -~-~~~pl~~~qil~~nli~D~-~~lal~--~d~~~~~~m-~~P~~~~~~~~~~~~ 773 (903)
T PRK15122 724 -I-PFLPMLAIHLLLQNLMYDI-SQLSLP--WDKMDKEFL-RKPRKWDAKNIGRFM 773 (903)
T ss_pred -h-ccchhHHHHHHHHHHHHHH-HHHhhc--CCCCCHhhc-CCCCCCChhhhHHHH
Confidence 1 1347766666666656663 565554 444555557 788887777776644
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-85 Score=818.06 Aligned_cols=586 Identities=20% Similarity=0.216 Sum_probs=462.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcc-CCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe
Q 002354 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGI-LPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407 (932)
Q Consensus 329 ~~~il~~~llg~~le~~~~~ka~~~l~~L~~~-~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~ 407 (932)
++++++.+++.-.+..++.+++++.+++|.+. .+.+++|+|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 131 ~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 131 GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG----GQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEeHHHCCCCCEEEECCCCEecccEEEEE
Confidence 33333333444444455555566666666653 4779999987 589999999999999999999999999999999
Q ss_pred e-eeEEeccccccCCCceeecCCCc--cccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhH
Q 002354 408 G-RSTVDESSFTGEPLPVTKIPESE--VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHF 484 (932)
Q Consensus 408 G-~~~VDES~LTGES~Pv~K~~g~~--V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~ 484 (932)
| ++.||||+|||||.|+.|.+++. ||+||.+.+|.++++|++||.+|.+|||.+++++++ +++|+|+.++++++++
T Consensus 207 g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 207 GLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLI 285 (941)
T ss_pred cCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHH
Confidence 9 89999999999999999999887 999999999999999999999999999999998865 5679999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc-C-cccc---hhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCcccc
Q 002354 485 TYGVIALSAATFVFWNLFGA-H-VLPT---AIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLR 559 (932)
Q Consensus 485 ~~~vl~la~~~~i~~~~~~~-~-~~~~---~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk 559 (932)
.++++++++++|++|++... . .... ....+.++...+.+++++++++|||+|++++|+++..+..+++++|+++|
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk 365 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVR 365 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEe
Confidence 99999888888877643210 0 0000 00012356778899999999999999999999999999999999999999
Q ss_pred CchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcc-------------cC
Q 002354 560 GGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVES-------------NT 626 (932)
Q Consensus 560 ~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~-------------~s 626 (932)
+++++|+||++|+||||||||||+|+|+|.+++..+..++........+. ...+++..+..+.+ ..
T Consensus 366 ~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~s~~~~~~~~~~~~~~~ 444 (941)
T TIGR01517 366 HLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK-HVRNILVEGISLNSSSEEVVDRGGKRAFI 444 (941)
T ss_pred chHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCH-HHHHHHHHHHHhCCCCccccCCCCccccC
Confidence 99999999999999999999999999999999875432221110000000 11223322222211 12
Q ss_pred CCcHHHHHHHHHHhcCCcccc-------ccCCCeEE-ecCCeeEEEEcC---eEEEeecHHHHhhcCCCCc---------
Q 002354 627 VHPIGKAIVEAAEFSNCQNVK-------VADGTFIE-EPGSGTVAIIED---RKVSVGTIDWLRSHGVDTS--------- 686 (932)
Q Consensus 627 ~hPi~~Ai~~~a~~~~~~~~~-------~~~~~~~~-~~g~g~~~~i~~---~~~~~Gs~~~i~~~~~~~~--------- 686 (932)
.+|++.|+++++...+.+... ....+|.. ..++++....++ ..++||+++.+...|....
T Consensus 445 g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~ 524 (941)
T TIGR01517 445 GSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPI 524 (941)
T ss_pred CCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccC
Confidence 578899999998865543211 11112222 123344444433 2488999999988774310
Q ss_pred -h-----hhhHHHHHhCCCeEEEEEE----------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCC
Q 002354 687 -T-----FQEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGD 744 (932)
Q Consensus 687 -~-----~~~~~~~~~~g~~~~~va~----------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd 744 (932)
. .+..+.++.+|.+++++++ |++|+|+++++|++|++++++|++||++|++++|+|||
T Consensus 525 ~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD 604 (941)
T TIGR01517 525 SDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGD 604 (941)
T ss_pred cHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCC
Confidence 0 0112335677889998875 34899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCC-------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHH
Q 002354 745 KKNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 799 (932)
Q Consensus 745 ~~~~a~~ia~~~gi~~~-------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al 799 (932)
+..||.++|+++||.++ .+|+|++|+||.++|+.||++|+.|+|+|||+||+|||
T Consensus 605 ~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapAL 684 (941)
T TIGR01517 605 NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPAL 684 (941)
T ss_pred ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHH
Confidence 99999999999999631 69999999999999999999999999999999999999
Q ss_pred HhCCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHH
Q 002354 800 ASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 878 (932)
Q Consensus 800 ~~A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~ 878 (932)
++|||||||| +|+|.|+++||+++++|++..|++++++||++++||+||+.|+++||+..+++++.+.+ ++ ...|+
T Consensus 685 k~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~--~~-~~~pl 761 (941)
T TIGR01517 685 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC--IS-STSPL 761 (941)
T ss_pred HhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-ccccH
Confidence 9999999999 99999999999999999999999999999999999999999999999998888764332 22 23577
Q ss_pred HHHHHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCccccc
Q 002354 879 IAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 925 (932)
Q Consensus 879 ~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~ 925 (932)
-+..+..++-+...+.++.|.. .++..+++++||.+.+.+..+..
T Consensus 762 ~~~qil~inl~~d~~~al~l~~--e~~~~~lm~~~P~~~~~~li~~~ 806 (941)
T TIGR01517 762 TAVQLLWVNLIMDTLAALALAT--EPPTEALLDRKPIGRNAPLISRS 806 (941)
T ss_pred HHHHHHHHHHHHHHhhHHHHcc--CCccHHHHhCCCCCCCCCcCCHH
Confidence 7777888888888888888864 44455568888887776665543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-84 Score=805.13 Aligned_cols=571 Identities=22% Similarity=0.310 Sum_probs=463.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeee-eEEec
Q 002354 336 VLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR-STVDE 414 (932)
Q Consensus 336 ~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~-~~VDE 414 (932)
+++.-.+..++.+|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++|+ +.|||
T Consensus 90 i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRd----g~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDE 165 (884)
T TIGR01522 90 ILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIRE----GKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDE 165 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceEEEc
Confidence 33334445555557778888999999999999987 58999999999999999999999999999999995 89999
Q ss_pred cccccCCCceeecCCC--------------ccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHH
Q 002354 415 SSFTGEPLPVTKIPES--------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQV 480 (932)
Q Consensus 415 S~LTGES~Pv~K~~g~--------------~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~ 480 (932)
|+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|+|.+++++++..++|+|+.++++
T Consensus 166 S~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l 245 (884)
T TIGR01522 166 SNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLL 245 (884)
T ss_pred ccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHH
Confidence 9999999999999874 79999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccC
Q 002354 481 SGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRG 560 (932)
Q Consensus 481 ~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~ 560 (932)
+.++.++++++++++++++++. +.+|..++..++++++++|||+|++++|+++..+..+++++|+++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 246 GKQLSLVSFGVIGVICLVGWFQ-----------GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----------cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 9999887766665555554332 23567889999999999999999999999999999999999999999
Q ss_pred chHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCC--------CCCC----CCCCC-CC--HHHHHHHHHHhccc
Q 002354 561 GNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDP--------NSKQ----NPIHP-LS--ETEILKFAAGVESN 625 (932)
Q Consensus 561 ~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~--------~~~~----~~~~~-~~--~~~ll~laa~~e~~ 625 (932)
++++|+||++|+||||||||||+|+|+|.+++..+..+.. .... ...+. .+ ..+++..++.+...
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 9999999999999999999999999999999875432110 0000 00000 11 13445444332211
Q ss_pred ---------CCCcHHHHHHHHHHhcCCccccccCCCeEEecCC------eeEEEE--cC--eEEEeecHHHHhhcCCCCc
Q 002354 626 ---------TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGS------GTVAII--ED--RKVSVGTIDWLRSHGVDTS 686 (932)
Q Consensus 626 ---------s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~------g~~~~i--~~--~~~~~Gs~~~i~~~~~~~~ 686 (932)
..||+++|++++++..+.+........+.+.|+. ++.... ++ ..+.||++|.+...|....
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1359999999999876653211112233444432 222222 22 3478999999998775321
Q ss_pred -------hh---------hhHHHHHhCCCeEEEEEECC-----EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCC
Q 002354 687 -------TF---------QEVEMEDLMNQSLVYVGVDN-----MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK 745 (932)
Q Consensus 687 -------~~---------~~~~~~~~~g~~~~~va~~~-----~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~ 745 (932)
.. +..+.+..+|.++++++++. +|+|+++++|++||+++++|+.|+++|++++|+|||+
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~ 554 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDS 554 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCC
Confidence 00 01123456799999999854 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC-------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHH
Q 002354 746 KNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALA 800 (932)
Q Consensus 746 ~~~a~~ia~~~gi~~~-------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~ 800 (932)
..+|.++|+++||... .+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+
T Consensus 555 ~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~ 634 (884)
T TIGR01522 555 QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALK 634 (884)
T ss_pred HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHH
Confidence 9999999999999631 599999999999999999999999999999999999999
Q ss_pred hCCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHH
Q 002354 801 SSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSI 879 (932)
Q Consensus 801 ~A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~ 879 (932)
+|||||+|| +|++.++++||+++++|++..+.+++++||++++|||||+.|.++.|+..+.+.+.. .++| ...|+.
T Consensus 635 ~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~ 711 (884)
T TIGR01522 635 LADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALA--TLMG-FPNPLN 711 (884)
T ss_pred hCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--HHHc-CCCchh
Confidence 999999999 799999999999999999999999999999999999999999999999877664321 2233 246777
Q ss_pred HHHHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCcccccc
Q 002354 880 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 926 (932)
Q Consensus 880 aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 926 (932)
+..+..+.-+...+.++.|.+ .+++.+.+++||.+.+....++.|
T Consensus 712 ~~qiL~inl~~d~~~a~~l~~--e~~~~~~m~~~P~~~~~~~~~~~~ 756 (884)
T TIGR01522 712 AMQILWINILMDGPPAQSLGV--EPVDKDVMRKPPRPRNDKILTKDL 756 (884)
T ss_pred HHHHHHHHHHHHhhHHHHhcc--CCCChhHhhCCCCCCCCCccCHHH
Confidence 778888888888888877765 445555688999888887777654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=759.61 Aligned_cols=517 Identities=27% Similarity=0.384 Sum_probs=434.9
Q ss_pred hhhhHHH--HHHHHHHHHHHHHHHHHHhHHHHHhhhccCCC-eEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEee
Q 002354 325 FFEEPIM--LIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPA 401 (932)
Q Consensus 325 yf~~~~~--il~~~llg~~le~~~~~ka~~~l~~L~~~~p~-~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPa 401 (932)
||+..+. +++.++++.++|.++++|+++.+++|+++.|+ .++|+|++ |++++|++++|+|||+|.|++||+||+
T Consensus 64 ~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d---g~~~~V~~~~L~~GDiV~V~~Gd~IPa 140 (675)
T TIGR01497 64 LFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD---GAIDKVPADQLKKGDIVLVEAGDVIPC 140 (675)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC---CEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 4554433 33447899999999999999999999999887 48887643 588999999999999999999999999
Q ss_pred eEEEEeeeeEEeccccccCCCceeecCCCc---cccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHH
Q 002354 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLAD 478 (932)
Q Consensus 402 Dgvll~G~~~VDES~LTGES~Pv~K~~g~~---V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d 478 (932)
||+|++|++.||||+|||||.||.|++|+. ||+||.+.+|.++++|+++|.+|+++||++++++++.+|+|+|...+
T Consensus 141 DG~vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~ 220 (675)
T TIGR01497 141 DGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALT 220 (675)
T ss_pred eEEEEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHH
Confidence 999999999999999999999999999985 99999999999999999999999999999999999999999998877
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccc
Q 002354 479 QVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLL 558 (932)
Q Consensus 479 ~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilv 558 (932)
.+..++..+.+ ++. +.+|.+.. +.+. ..++..++++++++|||+|+...|.....++.+++|+|+++
T Consensus 221 ~l~~~l~~v~l-i~~--~~~~~~~~--------~~~~--~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLv 287 (675)
T TIGR01497 221 ILLIALTLVFL-LVT--ATLWPFAA--------YGGN--AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIA 287 (675)
T ss_pred HHHHHHHHHHH-HHH--HHHHHHHH--------hcCh--hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEe
Confidence 76654433322 222 22232210 0111 23567789999999999999888988889999999999999
Q ss_pred cCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHH
Q 002354 559 RGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAA 638 (932)
Q Consensus 559 k~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a 638 (932)
|+++++|.+|++|+||||||||||+|+|++.++++. ++.++++++++++.++..++||+++|+++++
T Consensus 288 K~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~aa~~~~~s~hP~a~Aiv~~a 354 (675)
T TIGR01497 288 TSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-------------QGVDEKTLADAAQLASLADDTPEGKSIVILA 354 (675)
T ss_pred eCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec-------------CCCcHHHHHHHHHHhcCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999864 3456778999999999999999999999999
Q ss_pred HhcCCcccccc--CCCeEEecCC-eeEEE--EcCeEEEeecHHHHhhcCC----CCc-h-hhhHHHHHhCCCeEEEEEEC
Q 002354 639 EFSNCQNVKVA--DGTFIEEPGS-GTVAI--IEDRKVSVGTIDWLRSHGV----DTS-T-FQEVEMEDLMNQSLVYVGVD 707 (932)
Q Consensus 639 ~~~~~~~~~~~--~~~~~~~~g~-g~~~~--i~~~~~~~Gs~~~i~~~~~----~~~-~-~~~~~~~~~~g~~~~~va~~ 707 (932)
+..+.+..... ..++...++. ++++. .+++.+.||+++++.+.+. ... . .+..+..+.+|.+++++++|
T Consensus 355 ~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~ 434 (675)
T TIGR01497 355 KQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCED 434 (675)
T ss_pred HHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEEC
Confidence 87665422111 1223333333 55554 3678899999988765432 111 1 11223456789999999999
Q ss_pred CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEE
Q 002354 708 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVA 787 (932)
Q Consensus 708 ~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~ 787 (932)
++++|++.++|++||+++++|++||++|++++|+|||+..+|.++|+++||+ +++++++|+||.++|+.+|++|+.|+
T Consensus 435 ~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~g~~Va 512 (675)
T TIGR01497 435 NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAEGKLVA 512 (675)
T ss_pred CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999999999999999999999999999997 79999999999999999999999999
Q ss_pred EEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Q 002354 788 MVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI----VGIPIA 863 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~----i~i~la 863 (932)
|+|||+||+|||++|||||||++|++.++++||++++++|+..|.+++++||+++-+...-..|++.-++ ..||..
T Consensus 513 mvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~ 592 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAI 592 (675)
T ss_pred EECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888888888876544 455555
Q ss_pred hhhhhcccc
Q 002354 864 AGVLLPVTG 872 (932)
Q Consensus 864 ~~~~~~~~g 872 (932)
+...||..+
T Consensus 593 ~~~~~~~~~ 601 (675)
T TIGR01497 593 FAAAYPQLQ 601 (675)
T ss_pred HHhhCcchh
Confidence 555555443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-84 Score=737.41 Aligned_cols=588 Identities=23% Similarity=0.325 Sum_probs=469.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEE
Q 002354 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (932)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvl 405 (932)
|+++..|.+.+++.....-++++|+++++++|+++.|+.++|+|+ |+.+.+++++|||||||.++-||+||||.+|
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~----gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl 153 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRS----GKLQHILARELVPGDIVELKVGDKIPADLRL 153 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEec----CcccceehhccCCCCEEEEecCCccccceeE
Confidence 455555555555555555566667889999999999999999998 5899999999999999999999999999999
Q ss_pred Eee-eeEEeccccccCCCceeecC--------------CCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCC
Q 002354 406 RAG-RSTVDESSFTGEPLPVTKIP--------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (932)
Q Consensus 406 l~G-~~~VDES~LTGES~Pv~K~~--------------g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~ 470 (932)
++- +..||||.|||||.|+.|.. .+.+|+||.+..|.++++|+.||.+|.+|+|.+++++.++.|
T Consensus 154 ~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~k 233 (972)
T KOG0202|consen 154 IEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPK 233 (972)
T ss_pred EeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCC
Confidence 975 47899999999999999943 235899999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhHHHHHHHHHHHHHHH-HHhhccCcccchhccC---CcHHHHHHHHHHHHHHHhhhcchhhHHHHHHH
Q 002354 471 APVQRLADQVSGHFTYGVIALSAATFVF-WNLFGAHVLPTAIQYG---GPVSLALQLSCSVLVVACPCALGLATPTAMLV 546 (932)
Q Consensus 471 ~~lq~~~d~~~~~~~~~vl~la~~~~i~-~~~~~~~~~~~~~~~~---~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~ 546 (932)
+|+|+..|++...+..++.++++.+++. ..++. .| ...+ ..+...|..++++.+.++|.+|+..++++++.
T Consensus 234 TPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~---~p--~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLAL 308 (972)
T KOG0202|consen 234 TPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL---DP--VHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLAL 308 (972)
T ss_pred CcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc---cc--cccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHH
Confidence 9999999999999886666666655444 11111 01 0111 34567788999999999999999999999999
Q ss_pred HHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCC-------------CC---C---CCC
Q 002354 547 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN-------------SK---Q---NPI 607 (932)
Q Consensus 547 ~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~-------------~~---~---~~~ 607 (932)
|..+|+|++.++|++.++|+||.+++||.|||||||+|+|.+.+++..+...... .. . ...
T Consensus 309 G~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~ 388 (972)
T KOG0202|consen 309 GTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKD 388 (972)
T ss_pred hHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccc
Confidence 9999999999999999999999999999999999999999999999865332211 00 0 000
Q ss_pred CCCCHH---HHHHHHHH-----hccc-------CCCcHHHHHHHHHHhcCCccccccCC--------------------C
Q 002354 608 HPLSET---EILKFAAG-----VESN-------TVHPIGKAIVEAAEFSNCQNVKVADG--------------------T 652 (932)
Q Consensus 608 ~~~~~~---~ll~laa~-----~e~~-------s~hPi~~Ai~~~a~~~~~~~~~~~~~--------------------~ 652 (932)
.+...+ +++..++. ++++ -..|.+.|+...+++.++........ +
T Consensus 389 ~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~e 468 (972)
T KOG0202|consen 389 KAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAE 468 (972)
T ss_pred cccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeE
Confidence 112222 33333322 2212 25799999999998877653221111 1
Q ss_pred eEEecCCeeEEEE-----c---CeEEEeecHHHHhhcCCCCc--------hhh---------hHHHHHhCCCeEEEEEE-
Q 002354 653 FIEEPGSGTVAII-----E---DRKVSVGTIDWLRSHGVDTS--------TFQ---------EVEMEDLMNQSLVYVGV- 706 (932)
Q Consensus 653 ~~~~~g~g~~~~i-----~---~~~~~~Gs~~~i~~~~~~~~--------~~~---------~~~~~~~~g~~~~~va~- 706 (932)
+.+...+..++.+ . ...|.||++|.+.++|.... +.. ...+...+|.+++.++.
T Consensus 469 lpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~ 548 (972)
T KOG0202|consen 469 LPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASK 548 (972)
T ss_pred eecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEcc
Confidence 1112222222221 1 24599999999999884211 111 11124456778887764
Q ss_pred -----------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--
Q 002354 707 -----------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-- 761 (932)
Q Consensus 707 -----------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-- 761 (932)
|++|+|++++.||+|++++++|+.|+++||+|+|+|||+..||++||+++|+..+
T Consensus 549 ~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e 628 (972)
T KOG0202|consen 549 DSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE 628 (972)
T ss_pred CCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc
Confidence 5689999999999999999999999999999999999999999999999998532
Q ss_pred ---------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchH
Q 002354 762 ---------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVG 813 (932)
Q Consensus 762 ---------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~ 813 (932)
.+|+|++|+.|.++|+.||+.|+.|+|.|||+||+||||.||+||||| +|+|
T Consensus 629 d~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 629 DVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred cccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 689999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHH
Q 002354 814 AASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMA 893 (932)
Q Consensus 814 ~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~l 893 (932)
.+|++||+||.||||+.|..++++||.+|+|||+++.|.++.|+..+.+-+ +...+|+ -.|+.+..+.+..-+.--.
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~--l~aa~~~-p~pL~pvQiLWiNlvtDG~ 785 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIF--LTAAFGI-PEPLIPVQILWINLVTDGP 785 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHhCC-CCcccchhhheeeeeccCC
Confidence 999999999999999999999999999999999999999999986543322 1112343 3677777888887777777
Q ss_pred HhhhhccccccccccccCCCCCCCCCCccccccc
Q 002354 894 NSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 927 (932)
Q Consensus 894 nsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 927 (932)
.|..| -+.|..++++++||++.+.+++|+.|+
T Consensus 786 PA~aL--G~ep~D~DiM~kpPR~~~~~iit~~l~ 817 (972)
T KOG0202|consen 786 PATAL--GFEPVDPDIMKKPPRDSKDGIITGWLI 817 (972)
T ss_pred chhhc--CCCCCChhHHhCCCCCCCCCeeeHHHH
Confidence 77666 457888899999999999999999875
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=778.18 Aligned_cols=578 Identities=21% Similarity=0.263 Sum_probs=469.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEE
Q 002354 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (932)
Q Consensus 325 yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgv 404 (932)
+|..++.+++++++...++.++++|+.+.+++|.++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+
T Consensus 103 ~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRd----g~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~ 178 (997)
T TIGR01106 103 NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRD----GEKMSINAEQVVVGDLVEVKGGDRIPADLR 178 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEeeHHHCCCCCEEEECCCCEEeeeEE
Confidence 4445666777788888899999999999999999999999999987 589999999999999999999999999999
Q ss_pred EEeee-eEEeccccccCCCceeecCCC----------ccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChH
Q 002354 405 VRAGR-STVDESSFTGEPLPVTKIPES----------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (932)
Q Consensus 405 ll~G~-~~VDES~LTGES~Pv~K~~g~----------~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~l 473 (932)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++++++.+++|+
T Consensus 179 il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl 258 (997)
T TIGR01106 179 IISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI 258 (997)
T ss_pred EEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcH
Confidence 99996 799999999999999998874 5999999999999999999999999999999999988889999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhh
Q 002354 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGAT 553 (932)
Q Consensus 474 q~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~ 553 (932)
|+.+++++.+++++++++++++|++|.+.+ .+|..++.+++++++++|||+|++++++++..+..++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~ 327 (997)
T TIGR01106 259 AIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMAR 327 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHH
Confidence 999999999999998888888877765443 245678888999999999999999999999999999999
Q ss_pred cCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCC----CCC--CCHHHHHHHHHHhcc---
Q 002354 554 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHP--LSETEILKFAAGVES--- 624 (932)
Q Consensus 554 ~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~----~~~--~~~~~ll~laa~~e~--- 624 (932)
+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+..+..... .+. .....++..++.+..
T Consensus 328 ~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~ 407 (997)
T TIGR01106 328 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVF 407 (997)
T ss_pred CCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCee
Confidence 99999999999999999999999999999999999999876543322111000 010 111245554444321
Q ss_pred -------------cCCCcHHHHHHHHHHhcCCccccc--cCCCeEEe---cCCeeEEE-E--c---C---eEEEeecHHH
Q 002354 625 -------------NTVHPIGKAIVEAAEFSNCQNVKV--ADGTFIEE---PGSGTVAI-I--E---D---RKVSVGTIDW 677 (932)
Q Consensus 625 -------------~s~hPi~~Ai~~~a~~~~~~~~~~--~~~~~~~~---~g~g~~~~-i--~---~---~~~~~Gs~~~ 677 (932)
...+|++.|+++++...+...... ......+. +.+..+.. + + + ..+.||++|.
T Consensus 408 ~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~ 487 (997)
T TIGR01106 408 KAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPER 487 (997)
T ss_pred ccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHH
Confidence 124789999999987543221111 11112222 23332222 2 1 1 2479999999
Q ss_pred HhhcCCCC------ch-----hh----hHHHHHhCCCeEEEEEE------------------------CCEEEEEEEecc
Q 002354 678 LRSHGVDT------ST-----FQ----EVEMEDLMNQSLVYVGV------------------------DNMLAGLIYVED 718 (932)
Q Consensus 678 i~~~~~~~------~~-----~~----~~~~~~~~g~~~~~va~------------------------~~~~lG~i~l~D 718 (932)
+.+.|... .. .+ ..++++.+|.+++.+++ |++|+|+++++|
T Consensus 488 Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 488 ILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMID 567 (997)
T ss_pred HHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccC
Confidence 99988421 00 01 12235567888887663 456999999999
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 761 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 761 (932)
++|++++++|++|+++|++++|+|||+..+|.++|+++|+..+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 9999999999999999999999999999999999999999310
Q ss_pred --------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeCC
Q 002354 762 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGN 826 (932)
Q Consensus 762 --------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~~ 826 (932)
.||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|+|.++++||+++++|
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 299999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhcccccccc
Q 002354 827 RLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQ 906 (932)
Q Consensus 827 ~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~ 906 (932)
++..|.+++++||+++.|+++++.|.++.|+..+.+.+.. .++| .-.|+.+..++.+.-+...+.++.|.+ .+.+
T Consensus 728 ~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qlL~inli~d~lp~~al~~--e~~~ 802 (997)
T TIGR01106 728 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIF--IIAN-IPLPLGTITILCIDLGTDMVPAISLAY--EKAE 802 (997)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH--HHHc-CcchhHHHHHHHHHHHHHHHHHHHHhc--CCCC
Confidence 9999999999999999999999999999999766554422 2234 235777888888888888888888876 4455
Q ss_pred ccccCCCCCCC-CCCcc
Q 002354 907 KASFQAPSSRV-NSNVD 922 (932)
Q Consensus 907 ~~~~k~~~~~~-~~~~~ 922 (932)
.+.+++||++. +....
T Consensus 803 ~~~m~~~P~~~~~~~l~ 819 (997)
T TIGR01106 803 SDIMKRQPRNPKTDKLV 819 (997)
T ss_pred cccccCCCcCCcccccc
Confidence 55688777753 33444
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-81 Score=778.32 Aligned_cols=567 Identities=25% Similarity=0.333 Sum_probs=455.4
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeee-EEecc
Q 002354 337 LLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS-TVDES 415 (932)
Q Consensus 337 llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~-~VDES 415 (932)
.+...+...+..|+++.+++|+++.+.+++|+|+ |++++|+++||+|||+|.+++||+||||++|++++. .||||
T Consensus 114 ~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~----g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs 189 (917)
T COG0474 114 VINALLGFVQEYRAEKALEALKKMSSPKAKVLRD----GKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDES 189 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeC----CcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcc
Confidence 3333344445556777888888888999999996 699999999999999999999999999999999987 99999
Q ss_pred ccccCCCceeecC--------------CCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHH
Q 002354 416 SFTGEPLPVTKIP--------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS 481 (932)
Q Consensus 416 ~LTGES~Pv~K~~--------------g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~ 481 (932)
+|||||.|+.|.+ .+.+|+||.+.+|.+.+.|++||.+|.+|++.+++.......+|+|+.++++.
T Consensus 190 ~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~ 269 (917)
T COG0474 190 ALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLG 269 (917)
T ss_pred cccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHH
Confidence 9999999999963 46789999999999999999999999999999999998788999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCc
Q 002354 482 GHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGG 561 (932)
Q Consensus 482 ~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~ 561 (932)
.++..+.+++++++|+...+.+. .+|...+..++++++.++|.+|+..++++++.+..+++++++++|++
T Consensus 270 ~~l~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l 339 (917)
T COG0474 270 KFLLVLALVLGALVFVVGLFRGG----------NGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSL 339 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------ccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhcc
Confidence 99999999988888887644322 23688999999999999999999999999999999999999999999
Q ss_pred hHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCH--HHHHHHHHH---hccc------CCCcH
Q 002354 562 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE--TEILKFAAG---VESN------TVHPI 630 (932)
Q Consensus 562 ~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~--~~ll~laa~---~e~~------s~hPi 630 (932)
+++|+||++++||+|||||||+|+|+|.+++..+...+.. ......++ .+++..++. .... ..+|.
T Consensus 340 ~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdpt 416 (917)
T COG0474 340 NAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID---DKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPT 416 (917)
T ss_pred chhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc---ccccccchHHHHHHHHHHhcCcccccccCceecCCcc
Confidence 9999999999999999999999999999999874100000 00001111 122221111 1122 56999
Q ss_pred HHHHHHHHHhcCC--ccccccC-----CCeEEecCCeeEEEEc----C--eEEEeecHHHHhhcCCCC------c--hhh
Q 002354 631 GKAIVEAAEFSNC--QNVKVAD-----GTFIEEPGSGTVAIIE----D--RKVSVGTIDWLRSHGVDT------S--TFQ 689 (932)
Q Consensus 631 ~~Ai~~~a~~~~~--~~~~~~~-----~~~~~~~g~g~~~~i~----~--~~~~~Gs~~~i~~~~~~~------~--~~~ 689 (932)
+.||++.+++.+. +...... ..+.+.+.+..++.+. + ..++||+++.|.+.|... . ..+
T Consensus 417 E~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~ 496 (917)
T COG0474 417 EGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496 (917)
T ss_pred HHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHH
Confidence 9999999998776 3222211 1222333344333332 1 348999999998876521 0 001
Q ss_pred ----hHHHHHhCCCeEEE-----------------EEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHH
Q 002354 690 ----EVEMEDLMNQSLVY-----------------VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS 748 (932)
Q Consensus 690 ----~~~~~~~~g~~~~~-----------------va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~ 748 (932)
...++..+|.+++. .+.|..|+|+++++||+|++++++|+.|+++||+++|+|||+..|
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~T 576 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVET 576 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHH
Confidence 11123333443333 344678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCC---------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHh
Q 002354 749 AEYVASLVGIPKD---------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALAS 801 (932)
Q Consensus 749 a~~ia~~~gi~~~---------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~ 801 (932)
|.+||++||+..+ .||||++|+||.++|+.||+.|+.|+|+|||.||+||||+
T Consensus 577 A~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ 656 (917)
T COG0474 577 AIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKA 656 (917)
T ss_pred HHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHh
Confidence 9999999997432 5899999999999999999999999999999999999999
Q ss_pred CCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccccccHHH
Q 002354 802 SHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGTMLTPSI 879 (932)
Q Consensus 802 A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~~~g~~l~P~~ 879 (932)
|||||||| +|+|++|++||+++.++++..+..++++||++|.|+++.+.|.+.+|+..+.+.+ +.+ .+....|+.
T Consensus 657 ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~---~~~~~~p~~ 733 (917)
T COG0474 657 ADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSL---FNLFFLPLT 733 (917)
T ss_pred cCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcccccHH
Confidence 99999998 7999999999999999999999999999999999999999999999998544433 222 232246888
Q ss_pred HHHHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCccccc
Q 002354 880 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 925 (932)
Q Consensus 880 aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~ 925 (932)
+..++...-+...+.++.|.... ++.+.++.||.+.+.+.++..
T Consensus 734 ~~qll~inll~d~~pa~~L~~~~--~~~~~m~~~~~~p~~~i~~~~ 777 (917)
T COG0474 734 PLQLLWINLLTDSLPALALGVED--PESDVMKRPPRGPEEGLFNRK 777 (917)
T ss_pred HHHHHHHHHHHhhhhhheeecCC--CcccccccCCCCccccccchh
Confidence 88999998888998998887665 444556666666665555443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-80 Score=770.56 Aligned_cols=583 Identities=20% Similarity=0.241 Sum_probs=464.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEE
Q 002354 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (932)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvl 405 (932)
|..++++++++++.-.+..++.+|+++++++|+++.+.+++|+|+ |++++|+++||||||||.+++||+||||++|
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRd----g~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRN----GKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeC----CeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 345677778888888999999999999999999999999999988 6899999999999999999999999999999
Q ss_pred Eee-eeEEeccccccCCCceeecCC---------------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhc-
Q 002354 406 RAG-RSTVDESSFTGEPLPVTKIPE---------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS- 468 (932)
Q Consensus 406 l~G-~~~VDES~LTGES~Pv~K~~g---------------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~- 468 (932)
+++ ++.||||+|||||.||.|.+. +.+|+||.+.+|.++++|++||.+|.+|||.+++.+...
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 997 589999999999999999642 358999999999999999999999999999999865431
Q ss_pred ----------------------------------CCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccC
Q 002354 469 ----------------------------------REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG 514 (932)
Q Consensus 469 ----------------------------------~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~ 514 (932)
.++|+|+.+++++.++..+.+++++++|++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~------------ 304 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD------------ 304 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------
Confidence 2499999999999988887777777766543210
Q ss_pred CcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEec
Q 002354 515 GPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 594 (932)
Q Consensus 515 ~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~ 594 (932)
.+...+.+++++++.++|++|+..++++++.+..+++++++++|+++++|+||.+++||+|||||||+|+|+|.+++..
T Consensus 305 -~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~ 383 (1053)
T TIGR01523 305 -VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIP 383 (1053)
T ss_pred -hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEc
Confidence 1134667789999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CC-CC---------CCC-CC---------------C----C---------C----CCCCC---HHHHHHHHHHhc-----
Q 002354 595 GS-LT---------DPN-SK---------------Q----N---------P----IHPLS---ETEILKFAAGVE----- 623 (932)
Q Consensus 595 ~~-~~---------~~~-~~---------------~----~---------~----~~~~~---~~~ll~laa~~e----- 623 (932)
+. .+ .++ .. . + . ..+.. ..+++..++.+.
T Consensus 384 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~ 463 (1053)
T TIGR01523 384 RFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVF 463 (1053)
T ss_pred CCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeee
Confidence 31 11 000 00 0 0 0 00000 123444333221
Q ss_pred --------ccCCCcHHHHHHHHHHhcCCccc------cc---------------------cCCCeEEec---CCeeEEEE
Q 002354 624 --------SNTVHPIGKAIVEAAEFSNCQNV------KV---------------------ADGTFIEEP---GSGTVAII 665 (932)
Q Consensus 624 --------~~s~hPi~~Ai~~~a~~~~~~~~------~~---------------------~~~~~~~~~---g~g~~~~i 665 (932)
....+|++.|+++++...+.+.. .. ......+.| .+..+.++
T Consensus 464 ~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv 543 (1053)
T TIGR01523 464 KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASI 543 (1053)
T ss_pred ccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEE
Confidence 01258999999999877665210 00 001112222 33333332
Q ss_pred ---c-C---eEEEeecHHHHhhcCCCCc--------hh---------hhHHHHHhCCCeEEEEEE---------------
Q 002354 666 ---E-D---RKVSVGTIDWLRSHGVDTS--------TF---------QEVEMEDLMNQSLVYVGV--------------- 706 (932)
Q Consensus 666 ---~-~---~~~~~Gs~~~i~~~~~~~~--------~~---------~~~~~~~~~g~~~~~va~--------------- 706 (932)
+ + ..++||++|.+.+.|.... +. +..++++.+|.+++.+++
T Consensus 544 ~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~ 623 (1053)
T TIGR01523 544 YEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKN 623 (1053)
T ss_pred EEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhc
Confidence 1 2 2378999999999885321 00 112335678999888763
Q ss_pred ----------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---------------
Q 002354 707 ----------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------- 761 (932)
Q Consensus 707 ----------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------- 761 (932)
|++|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||..+
T Consensus 624 ~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vi 703 (1053)
T TIGR01523 624 ETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVM 703 (1053)
T ss_pred cccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceee
Confidence 4579999999999999999999999999999999999999999999999999532
Q ss_pred --------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcC
Q 002354 762 --------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVAS 820 (932)
Q Consensus 762 --------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad 820 (932)
.+|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||| +|++.|+++||
T Consensus 704 tG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aAD 783 (1053)
T TIGR01523 704 TGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASD 783 (1053)
T ss_pred ehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcC
Confidence 389999999999999999999999999999999999999999999999 89999999999
Q ss_pred EEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccccHHHHHHHhhhhHHHHHHHhhhh
Q 002354 821 VVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTPSIAGALMGLSSIGVMANSLLL 898 (932)
Q Consensus 821 ~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~-~~g~~l~P~~aa~~m~~ssl~v~lnsl~l 898 (932)
+++.+|++..|.+++++||++++||++++.|.++.|+..+.+.+ +.++. ..|....|+.+..+.++.-+...+.++.|
T Consensus 784 ivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL 863 (1053)
T TIGR01523 784 IVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGL 863 (1053)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999997655443 22221 11322347777777787778888888887
Q ss_pred ccccccccccccCCCCCCCCCCccccccc
Q 002354 899 RLKFSSKQKASFQAPSSRVNSNVDSHQLM 927 (932)
Q Consensus 899 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 927 (932)
.+ .+++.+++++||++.+.+.++..+.
T Consensus 864 ~~--e~~~~~~m~~~Pr~~~~~l~~~~~~ 890 (1053)
T TIGR01523 864 GL--EKAAPDLMDRLPHDNEVGIFQKELI 890 (1053)
T ss_pred cc--CCCChhHHhcCCCCCCccccCHHHH
Confidence 65 4566678999999888888876543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-78 Score=753.65 Aligned_cols=588 Identities=21% Similarity=0.249 Sum_probs=467.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEE
Q 002354 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (932)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll 406 (932)
..++++++++++...+..++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|+
T Consensus 37 ~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd----g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll 112 (917)
T TIGR01116 37 VEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD----GRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEEHHHCCCCCEEEECCCCEeeccEEEE
Confidence 35566677777888888888999999999999999999999987 58999999999999999999999999999999
Q ss_pred eee-eEEeccccccCCCceeecCC-------------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCCh
Q 002354 407 AGR-STVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472 (932)
Q Consensus 407 ~G~-~~VDES~LTGES~Pv~K~~g-------------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~ 472 (932)
+|+ +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|||.+++++++.+++|
T Consensus 113 ~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~ 192 (917)
T TIGR01116 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTP 192 (917)
T ss_pred EecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCC
Confidence 995 89999999999999999875 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCc-ccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHh
Q 002354 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHV-LPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLG 551 (932)
Q Consensus 473 lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~-~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~ 551 (932)
+|+.+++++.++.++++++++++|+++....... ....+. ..+...+..++++++++|||+|+++++++++.+..++
T Consensus 193 lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m 270 (917)
T TIGR01116 193 LQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWI--QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM 270 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH--HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH
Confidence 9999999999998888888777776653321100 000000 1234456678899999999999999999999999999
Q ss_pred hhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCC------CC-CCCCCCCC----------CCC---
Q 002354 552 ATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLT------DP-NSKQNPIH----------PLS--- 611 (932)
Q Consensus 552 a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~------~~-~~~~~~~~----------~~~--- 611 (932)
+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+ +. +....+.. ...
T Consensus 271 ~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (917)
T TIGR01116 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAG 350 (917)
T ss_pred HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHH
Confidence 99999999999999999999999999999999999999998754221 00 00000000 000
Q ss_pred HHHHHHHHHHhcc-------------cCCCcHHHHHHHHHHhcCCccccc----------------c--CCCeE---Eec
Q 002354 612 ETEILKFAAGVES-------------NTVHPIGKAIVEAAEFSNCQNVKV----------------A--DGTFI---EEP 657 (932)
Q Consensus 612 ~~~ll~laa~~e~-------------~s~hPi~~Ai~~~a~~~~~~~~~~----------------~--~~~~~---~~~ 657 (932)
..+++..++.+.. ...+|.+.|+++++++.+.+.... + ..... +.+
T Consensus 351 ~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s 430 (917)
T TIGR01116 351 LEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSR 430 (917)
T ss_pred HHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccCh
Confidence 1223333322111 125899999999988766432110 0 00111 222
Q ss_pred CCeeEEEE-c--C--eEEEeecHHHHhhcCCCCc-------h--hh-------hHHHHHh-CCCeEEEEEE---------
Q 002354 658 GSGTVAII-E--D--RKVSVGTIDWLRSHGVDTS-------T--FQ-------EVEMEDL-MNQSLVYVGV--------- 706 (932)
Q Consensus 658 g~g~~~~i-~--~--~~~~~Gs~~~i~~~~~~~~-------~--~~-------~~~~~~~-~g~~~~~va~--------- 706 (932)
.+..+..+ + + ..++||+++.+.+.|.... + .+ ..+.++. +|.+++.+++
T Consensus 431 ~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~ 510 (917)
T TIGR01116 431 DRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE 510 (917)
T ss_pred hhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc
Confidence 23333332 2 2 3488999999999885311 0 01 1223456 7888888763
Q ss_pred --------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------------
Q 002354 707 --------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------ 760 (932)
Q Consensus 707 --------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------ 760 (932)
|.+|+|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++|+..
T Consensus 511 ~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g 590 (917)
T TIGR01116 511 DLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTG 590 (917)
T ss_pred cccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeH
Confidence 347999999999999999999999999999999999999999999999999964
Q ss_pred -----------------CceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEE
Q 002354 761 -----------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVL 823 (932)
Q Consensus 761 -----------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl 823 (932)
..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||+||+|++.++++||+++
T Consensus 591 ~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl 670 (917)
T TIGR01116 591 REFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVL 670 (917)
T ss_pred HHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEE
Confidence 149999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccc
Q 002354 824 MGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 903 (932)
Q Consensus 824 ~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~ 903 (932)
.+|++..|.+++++||++++|+++++.|.++.|+..+.+.+... ++| .-.|+-+..+..++-+...+.++.|.+..
T Consensus 671 ~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~--~~~-~~~pl~~~qll~inli~d~lp~~~l~~~~- 746 (917)
T TIGR01116 671 ADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA--ALG-IPEGLIPVQLLWVNLVTDGLPATALGFNP- 746 (917)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH--HHc-CCchHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 99999999999999999999999999999999997555443221 233 23577777788888888888888886543
Q ss_pred cccccccCCCCCCCCCCccccc
Q 002354 904 SKQKASFQAPSSRVNSNVDSHQ 925 (932)
Q Consensus 904 ~~~~~~~k~~~~~~~~~~~~~~ 925 (932)
+..+.+++||.+.+...++-.
T Consensus 747 -~~~~~m~~pP~~~~~~l~~~~ 767 (917)
T TIGR01116 747 -PDKDIMWKPPRRPDEPLITGW 767 (917)
T ss_pred -cchhHhcCCCCCCCCCcccHH
Confidence 336668888887766666543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=705.47 Aligned_cols=556 Identities=22% Similarity=0.264 Sum_probs=456.4
Q ss_pred CCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEee-eeEEeccccccCCCceeecC--CCcccccee
Q 002354 361 LPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG-RSTVDESSFTGEPLPVTKIP--ESEVAAGSI 437 (932)
Q Consensus 361 ~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G-~~~VDES~LTGES~Pv~K~~--g~~V~aGt~ 437 (932)
...+..|+|+ |+.++|++.||++|||+.++.||.|||||++++| ++.+|||++||||.+++|.. +.++++||.
T Consensus 218 ~~~k~~ViR~----G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTk 293 (1034)
T KOG0204|consen 218 RNIKFQVIRG----GRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTK 293 (1034)
T ss_pred hceEEEEEEC----CEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecce
Confidence 3467888987 6999999999999999999999999999999999 58999999999999999976 668999999
Q ss_pred eecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcc---Cccc------
Q 002354 438 NLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA---HVLP------ 508 (932)
Q Consensus 438 v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~---~~~~------ 508 (932)
+.+|++++.|+.+|.+|..|+++..+.+...+++|+|-.+++++.....+.+.+++++|++...... ....
T Consensus 294 v~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~ 373 (1034)
T KOG0204|consen 294 VMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTT 373 (1034)
T ss_pred eecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCcc
Confidence 9999999999999999999999999999988999999999999999888888888888776543321 1000
Q ss_pred chhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEE
Q 002354 509 TAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVV 588 (932)
Q Consensus 509 ~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v 588 (932)
..-.....+.+.|..++.++++++|++||+|++++++.++++|.+.+.|+|.++++|++|..++||.|||||||.|+|+|
T Consensus 374 ~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 374 WSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred ccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 00001133566777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhc-----------------ccCCCcHHHHHHHHHHhcCCccccccCC
Q 002354 589 TKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE-----------------SNTVHPIGKAIVEAAEFSNCQNVKVADG 651 (932)
Q Consensus 589 ~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e-----------------~~s~hPi~~Ai~~~a~~~~~~~~~~~~~ 651 (932)
.+.+..++.++.+.+.. ..+++.-.--+..++. .....|.++||+.+....|.+....+.+
T Consensus 454 V~~~~~~~~~k~~~~~~--~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e 531 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKS--SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPE 531 (1034)
T ss_pred EeeeeccccccccCccc--ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcch
Confidence 99999876666444321 2333322111222221 2245899999999998877654333322
Q ss_pred C--eEEec------CCeeEEEE-cCe--EEEeecHHHHhhcCCCCch-------hh---------hHHHHHhCCCeEEEE
Q 002354 652 T--FIEEP------GSGTVAII-EDR--KVSVGTIDWLRSHGVDTST-------FQ---------EVEMEDLMNQSLVYV 704 (932)
Q Consensus 652 ~--~~~~~------g~g~~~~i-~~~--~~~~Gs~~~i~~~~~~~~~-------~~---------~~~~~~~~g~~~~~v 704 (932)
. .+..| ..|+.... ++. .++||+.|.+...|..+.. +. ..+..+.++.+++++
T Consensus 532 ~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~l 611 (1034)
T KOG0204|consen 532 EKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICL 611 (1034)
T ss_pred hheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeE
Confidence 1 22222 12333332 222 6899999999998864311 11 123356678888888
Q ss_pred EE---------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--
Q 002354 705 GV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-- 761 (932)
Q Consensus 705 a~---------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-- 761 (932)
++ +.+++|+++++||+||+++++|+.|+++||+|.|+||||-.||++||.+|||..+
T Consensus 612 Ay~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~ 691 (1034)
T KOG0204|consen 612 AYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG 691 (1034)
T ss_pred EeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC
Confidence 86 3479999999999999999999999999999999999999999999999999432
Q ss_pred -------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHH
Q 002354 762 -------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAA 815 (932)
Q Consensus 762 -------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a 815 (932)
+|+||-+|.||..+|+.|++.|++|+..|||+||+|||+.||||.||| .|++.|
T Consensus 692 d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 692 DFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred ccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 699999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHh
Q 002354 816 SEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANS 895 (932)
Q Consensus 816 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lns 895 (932)
||+|||++++|||+.|.++++|||+.|.+|+|+++|+++.|++++.+++-.- ...| =+|+-|..+.+..-++.+|-|
T Consensus 772 KEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A-~~~~--dsPLtAVQlLWVNLIMDTLgA 848 (1034)
T KOG0204|consen 772 KEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSA-CATG--DSPLTAVQLLWVNLIMDTLGA 848 (1034)
T ss_pred hhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhh-hhcC--CccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887775221 1234 379999999999999999999
Q ss_pred hhhccccccccccccCCCCCCCCCCccccccc
Q 002354 896 LLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 927 (932)
Q Consensus 896 l~l~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 927 (932)
|.|+-+ ||..+ ++|++|--.+-...|..|+
T Consensus 849 LALATe-pPt~~-Lm~RkP~GR~~~LIt~tMw 878 (1034)
T KOG0204|consen 849 LALATE-PPTDE-LMKRKPVGRTKPLITRTMW 878 (1034)
T ss_pred HHhccC-CCChH-HhcCCCCCCCCcchHHHHH
Confidence 999765 33333 6788887777777776665
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=716.52 Aligned_cols=477 Identities=34% Similarity=0.474 Sum_probs=432.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhc--cCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeee
Q 002354 333 IAFVLLGKNLEQRAKIKATSDMTGLLG--ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410 (932)
Q Consensus 333 l~~~llg~~le~~~~~ka~~~l~~L~~--~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~ 410 (932)
+++++++.+++.+.++++++.+++|.+ +.|++++|+|+ | +++|++++|+|||+|.+++||+|||||+|++|++
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~----g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~ 77 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRN----G-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC 77 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEEC----C-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE
Confidence 456788999999999999999999998 89999999986 5 7899999999999999999999999999999999
Q ss_pred EEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHH-hhHHHHHH
Q 002354 411 TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS-GHFTYGVI 489 (932)
Q Consensus 411 ~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~-~~~~~~vl 489 (932)
.||||+|||||.|+.|.+||.+++||.+.+|+++++|+++|.+|..+++...+++++..++++++..++++ .+|+++++
T Consensus 78 ~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~ 157 (499)
T TIGR01494 78 FVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVL 157 (499)
T ss_pred EEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999 89999999
Q ss_pred HHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhccc
Q 002354 490 ALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAM 569 (932)
Q Consensus 490 ~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~ 569 (932)
+++++++++|++.... ..+|..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|++++
T Consensus 158 ~la~~~~~~~~~~~~~--------~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~ 229 (499)
T TIGR01494 158 LIALAVFLFWAIGLWD--------PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGK 229 (499)
T ss_pred HHHHHHHHHHHHHHcc--------cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccC
Confidence 9999999888654321 01367889999999999999999999999999999999999999999999999999
Q ss_pred ccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCcccccc
Q 002354 570 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVA 649 (932)
Q Consensus 570 v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~ 649 (932)
+|++|||||||||+|+|++.++++.+ . |..+.||+++|++++++.....
T Consensus 230 v~~i~fDKTGTLT~~~~~v~~~~~~~-------------~-------------~~~s~hp~~~ai~~~~~~~~~~----- 278 (499)
T TIGR01494 230 VDYICSDKTGTLTKNEMSFKKVSVLG-------------G-------------EYLSGHPDERALVKSAKWKILN----- 278 (499)
T ss_pred CcEEEeeCCCccccCceEEEEEEecC-------------C-------------CcCCCChHHHHHHHHhhhcCcc-----
Confidence 99999999999999999999998641 1 4678999999999998754321
Q ss_pred CCCeEEecCCeeEEEEcC--eEEEeecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHH
Q 002354 650 DGTFIEEPGSGTVAIIED--RKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHV 727 (932)
Q Consensus 650 ~~~~~~~~g~g~~~~i~~--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~ 727 (932)
..+|...+ +|+...+++ ..+.+|+++++.+.|... .+..+....+|.++++++++++++|++.++|++|++++++
T Consensus 279 ~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~~--~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~ 355 (499)
T TIGR01494 279 VFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKDL--EEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKET 355 (499)
T ss_pred eeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHHH--HHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHH
Confidence 23455555 677777764 679999999998876421 1122234567899999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 728 VNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 728 i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
|+.|+++|++++|+|||++.++..+|+++|+ +++++|++|.++|+.+|++|+.|+|+|||.||++||++|||||+
T Consensus 356 i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia 430 (499)
T TIGR01494 356 ISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIA 430 (499)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccc
Confidence 9999999999999999999999999999997 79999999999999999999999999999999999999999999
Q ss_pred ecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002354 808 MGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGV 866 (932)
Q Consensus 808 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~ 866 (932)
|+ ++++||++++++++..+..++++||+++++++||+.|++.||++.+|+++++
T Consensus 431 ~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 431 MG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred cc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97 6899999999999999999999999999999999999999999999999753
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-76 Score=745.18 Aligned_cols=567 Identities=19% Similarity=0.231 Sum_probs=440.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEc--CCCEEee
Q 002354 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVL--PGDRIPA 401 (932)
Q Consensus 324 ~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~--~Ge~IPa 401 (932)
.||..++++++++++...+..++++|+.+.++++.. .|..++|+|+ |++++|+++||+|||+|.|+ +|++|||
T Consensus 191 ~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rd----g~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 191 EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRN----GKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEEC----CEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 355567777888888999999999999888888755 4789999987 58999999999999999999 9999999
Q ss_pred eEEEEeeeeEEeccccccCCCceeecCC------------------Cccccceeeec-------CcEEEEEEecCCcchH
Q 002354 402 DGVVRAGRSTVDESSFTGEPLPVTKIPE------------------SEVAAGSINLN-------GTLTVEVRRPGGETAM 456 (932)
Q Consensus 402 Dgvll~G~~~VDES~LTGES~Pv~K~~g------------------~~V~aGt~v~~-------G~~~~~V~~tG~~T~~ 456 (932)
||+|++|++.||||+|||||.|+.|.+. +.+|+||.+.+ |.+.++|++||.+|..
T Consensus 266 D~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~ 345 (1054)
T TIGR01657 266 DSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSK 345 (1054)
T ss_pred eEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccc
Confidence 9999999999999999999999999762 13999999984 7899999999999999
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcc
Q 002354 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCAL 536 (932)
Q Consensus 457 gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL 536 (932)
|++++++.+++..++++++.+.++...+. +++++.++++++.+ +..+.++...+.++++++++++|++|
T Consensus 346 G~i~~~i~~~~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~-------~~~~~~~~~~~l~~l~iiv~~vP~~L 414 (1054)
T TIGR01657 346 GQLVRSILYPKPRVFKFYKDSFKFILFLA----VLALIGFIYTIIEL-------IKDGRPLGKIILRSLDIITIVVPPAL 414 (1054)
T ss_pred hHHHHHhhCCCCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHH-------HHcCCcHHHHHHHHHHHHHhhcCchH
Confidence 99999999988888999888777655443 33333333222211 11234678889999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 002354 537 GLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEIL 616 (932)
Q Consensus 537 ~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll 616 (932)
++++++++..++.+++++||++|++.++|.+|++|++|||||||||+|+|.|.+++..+...................++
T Consensus 415 P~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (1054)
T TIGR01657 415 PAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITH 494 (1054)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHH
Confidence 99999999999999999999999999999999999999999999999999999998754321110000000001112222
Q ss_pred HHHHHhc-------ccCCCcHHHHHHHHHHhcCCc--c--cccc----------C------CCeEEecCCeeEEEE---c
Q 002354 617 KFAAGVE-------SNTVHPIGKAIVEAAEFSNCQ--N--VKVA----------D------GTFIEEPGSGTVAII---E 666 (932)
Q Consensus 617 ~laa~~e-------~~s~hPi~~Ai~~~a~~~~~~--~--~~~~----------~------~~~~~~~g~g~~~~i---~ 666 (932)
...+.+. ....+|++.|++++....-.. . .... . ..+.+.+.+..+.++ .
T Consensus 495 ~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~ 574 (1054)
T TIGR01657 495 KALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTN 574 (1054)
T ss_pred HHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEc
Confidence 2222211 234799999999986432100 0 0000 0 112222333222222 2
Q ss_pred --Ce--EEEeecHHHHhhcCCCCc---h-hhhHHHHHhCCCeEEEEEE---------------------CCEEEEEEEec
Q 002354 667 --DR--KVSVGTIDWLRSHGVDTS---T-FQEVEMEDLMNQSLVYVGV---------------------DNMLAGLIYVE 717 (932)
Q Consensus 667 --~~--~~~~Gs~~~i~~~~~~~~---~-~~~~~~~~~~g~~~~~va~---------------------~~~~lG~i~l~ 717 (932)
++ .++||+||.+.+.|.... . .+..+.++.+|.+++.+++ |++|+|+++|+
T Consensus 575 ~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~ 654 (1054)
T TIGR01657 575 DERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFE 654 (1054)
T ss_pred CCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEe
Confidence 22 589999999999987422 1 1233456788999998875 45799999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------------------------
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------ 761 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------ 761 (932)
|++||+++++|+.|+++||+++|+|||+..||.++|+++||..+
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVE 734 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccccccc
Confidence 99999999999999999999999999999999999999999310
Q ss_pred ---------------------------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccH
Q 002354 762 ---------------------------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDA 796 (932)
Q Consensus 762 ---------------------------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~ 796 (932)
.||||++|+||.++|+.||+.|+.|+|+|||+||+
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~ 814 (1054)
T TIGR01657 735 IPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDC 814 (1054)
T ss_pred ccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHH
Confidence 48999999999999999999999999999999999
Q ss_pred HHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccc
Q 002354 797 AALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLT 876 (932)
Q Consensus 797 ~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~ 876 (932)
+||++|||||||+++ | |..+||+++.+++++.|+++|++||+++.++++.+.|.+.|+++.... ...++ ..|..++
T Consensus 815 ~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~-~~~l~-~~~~~l~ 890 (1054)
T TIGR01657 815 GALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS-VSILY-LIGSNLG 890 (1054)
T ss_pred HHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HccCcCc
Confidence 999999999999865 3 458999999999999999999999999999999999999999875432 22222 2343344
Q ss_pred HHHHHHHhhhhHHHHHHHhhhhccccccccccccCCCCC
Q 002354 877 PSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 915 (932)
Q Consensus 877 P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~ 915 (932)
| ..++.+..++....++.|.+..|. .+++++||.
T Consensus 891 ~---~Q~l~i~li~~~~~~l~l~~~~p~--~~l~~~~P~ 924 (1054)
T TIGR01657 891 D---GQFLTIDLLLIFPVALLMSRNKPL--KKLSKERPP 924 (1054)
T ss_pred c---HHHHHHHHHHHHHHHHHHHcCCch--hhcCCCCCC
Confidence 4 466777778888888877655433 345666663
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-66 Score=651.30 Aligned_cols=616 Identities=16% Similarity=0.133 Sum_probs=456.3
Q ss_pred ccHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Q 002354 277 PGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTG 356 (932)
Q Consensus 277 ~g~~~~~~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~ 356 (932)
..|.|++..+...+++..|+.+|+...+.....+| + .....++.+.++++++..+++++|++.++|+++.++
T Consensus 12 ~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s------~-~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n- 83 (1057)
T TIGR01652 12 TVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS------P-TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN- 83 (1057)
T ss_pred cchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC------C-CCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh-
Confidence 34566777777777788888888754433221111 1 123456667778888889999999999999987654
Q ss_pred hhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe-----eeeEEeccccccCCCceeecCC--
Q 002354 357 LLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPE-- 429 (932)
Q Consensus 357 L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~-----G~~~VDES~LTGES~Pv~K~~g-- 429 (932)
++.++|+|++ |+++++++++|+|||+|.|++||+||||++|++ |.+.||||.||||+.|+.|.+.
T Consensus 84 -----~~~~~v~~~~---~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 84 -----NRLTEVLEGH---GQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred -----CcEEEEECCC---CcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 5789998863 478999999999999999999999999999996 7799999999999999999641
Q ss_pred ----------------------------------------------Cccccceeeec-CcEEEEEEecCCcchHHHHHHH
Q 002354 430 ----------------------------------------------SEVAAGSINLN-GTLTVEVRRPGGETAMGDIVRL 462 (932)
Q Consensus 430 ----------------------------------------------~~V~aGt~v~~-G~~~~~V~~tG~~T~~gki~~~ 462 (932)
+.+++||.+.+ |.+.+.|++||.+|.+++.
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n--- 232 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN--- 232 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc---
Confidence 34788999998 8999999999999987664
Q ss_pred HHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCccc-chhcc--------CCcHHHHHHHHHHHHHHHhh
Q 002354 463 VEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLP-TAIQY--------GGPVSLALQLSCSVLVVACP 533 (932)
Q Consensus 463 v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~-~~~~~--------~~~~~~~l~~ai~vLvva~P 533 (932)
....+.+++++++.++++..++..+.++++++.+++..++...... .++.. ...+...+..++.++...+|
T Consensus 233 ~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IP 312 (1057)
T TIGR01652 233 ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIP 312 (1057)
T ss_pred CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcc
Confidence 3445667899999999998887777777777776654333211000 01100 01233466778888889999
Q ss_pred hcchhhHHHHHHHHH------HHhhhc----CccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCC
Q 002354 534 CALGLATPTAMLVGT------SLGATR----GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSK 603 (932)
Q Consensus 534 ~aL~la~p~a~~~~~------~~~a~~----gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~ 603 (932)
.+|++.+.++...+. .++.++ ++++|+.+.+|+||+|++||+|||||||+|+|++++++..+..|.....
T Consensus 313 isL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~ 392 (1057)
T TIGR01652 313 ISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFT 392 (1057)
T ss_pred eeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcc
Confidence 999999999988888 666653 5999999999999999999999999999999999999887654432100
Q ss_pred --------C------------CC-----------------CCCCC--HHHHHHHHHHh-----c---c-------cCCCc
Q 002354 604 --------Q------------NP-----------------IHPLS--ETEILKFAAGV-----E---S-------NTVHP 629 (932)
Q Consensus 604 --------~------------~~-----------------~~~~~--~~~ll~laa~~-----e---~-------~s~hP 629 (932)
. .. .+..+ ..+++..++.+ + . ...+|
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp 472 (1057)
T TIGR01652 393 EIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASP 472 (1057)
T ss_pred hHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCC
Confidence 0 00 00000 11222211111 1 1 13689
Q ss_pred HHHHHHHHHHhcCCccccccCC-------------Ce------EEecCCe-eEEEEc--C---eEEEeecHHHHhhcCCC
Q 002354 630 IGKAIVEAAEFSNCQNVKVADG-------------TF------IEEPGSG-TVAIIE--D---RKVSVGTIDWLRSHGVD 684 (932)
Q Consensus 630 i~~Ai~~~a~~~~~~~~~~~~~-------------~~------~~~~g~g-~~~~i~--~---~~~~~Gs~~~i~~~~~~ 684 (932)
.+.|++++++..|+.....+.. .+ .+...+. +...+. + ..++||+++.+.+.|..
T Consensus 473 ~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~ 552 (1057)
T TIGR01652 473 DEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSS 552 (1057)
T ss_pred cHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhc
Confidence 9999999998887653321111 11 1111222 222222 2 24899999999988763
Q ss_pred Cc------hhhhHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEecccc
Q 002354 685 TS------TFQEVEMEDLMNQSLVYVGV--------------------------------------DNMLAGLIYVEDRI 720 (932)
Q Consensus 685 ~~------~~~~~~~~~~~g~~~~~va~--------------------------------------~~~~lG~i~l~D~l 720 (932)
.. ..+..++++.+|.+++.+++ |++|+|+++++|++
T Consensus 553 ~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~l 632 (1057)
T TIGR01652 553 GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKL 632 (1057)
T ss_pred cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhh
Confidence 21 11123346778999888763 56899999999999
Q ss_pred cHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---------------------------------------
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------------------- 761 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------------------- 761 (932)
|++++++|+.|+++||++||+|||+.+||.++|+++|+...
T Consensus 633 q~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 712 (1057)
T TIGR01652 633 QEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDS 712 (1057)
T ss_pred hhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccC
Confidence 99999999999999999999999999999999999997310
Q ss_pred ---------------------------------ceecccChhhHHHHHHHHhhC-CCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 762 ---------------------------------KVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 762 ---------------------------------~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
.|+||++|+||.++|+.+|+. |+.|+|+|||.||++||++|||||+
T Consensus 713 ~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIg 792 (1057)
T TIGR01652 713 GNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVG 792 (1057)
T ss_pred CceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeE
Confidence 289999999999999999998 9999999999999999999999998
Q ss_pred ec-CchHHHHhhcCEEEeCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccccHHHHHHH
Q 002354 808 MG-GGVGAASEVASVVLMGNRLSQLLVAL-ELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTPSIAGAL 883 (932)
Q Consensus 808 ~~-~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~-~~g~~l~P~~aa~~ 883 (932)
+. .....|+.+||+++. ++..+.+++ .+||.+++++++.+.|.+..|++.+.+.+ +.++. +.| .+|.-...+
T Consensus 793 i~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~--~~~~~~~~l 868 (1057)
T TIGR01652 793 ISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG--QTLYEGWYM 868 (1057)
T ss_pred ecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--HHHHHHHHH
Confidence 84 222368899999997 599999988 77999999999999999999986554433 22221 122 345556667
Q ss_pred hhhhHHHHHHHhhhhccccccccccccCCCCC
Q 002354 884 MGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 915 (932)
Q Consensus 884 m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~ 915 (932)
+.+..+...+.++.+.....+.++..++++|.
T Consensus 869 ~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ 900 (1057)
T TIGR01652 869 VLYNVFFTALPVISLGVFDQDVSASLSLRYPQ 900 (1057)
T ss_pred HHHHHHHHhHHHHHHHHhcccCCHHHHHhChH
Confidence 77888888888888865545555555666666
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-68 Score=602.20 Aligned_cols=610 Identities=21% Similarity=0.273 Sum_probs=457.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCC
Q 002354 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (932)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g 375 (932)
..+|+.+++.++|+...+..-..+...+.+...++++...+.+.-....++..|..+-++.+.++.|..++|+|+ |
T Consensus 96 ~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRd----g 171 (1019)
T KOG0203|consen 96 FSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRD----G 171 (1019)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeec----c
Confidence 456777777777764443332211111233334445555555556667777888899999999999999999998 5
Q ss_pred cEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeee-eEEeccccccCCCceeecCC----------CccccceeeecCcEE
Q 002354 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLT 444 (932)
Q Consensus 376 ~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~-~~VDES~LTGES~Pv~K~~g----------~~V~aGt~v~~G~~~ 444 (932)
+.+.+..++|++||+|.++-|++||||.+++++. ++||+|+|||||+|..+.+. +.-|.+|.+++|..+
T Consensus 172 ~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~ 251 (1019)
T KOG0203|consen 172 EKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGR 251 (1019)
T ss_pred eeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEE
Confidence 8899999999999999999999999999999886 89999999999999998763 347889999999999
Q ss_pred EEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHH
Q 002354 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (932)
Q Consensus 445 ~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (932)
+.|++||.+|.+|+|..+-..-+..++|+++..+++..+.+...+.+.+..|++-... +..|..++.+.
T Consensus 252 givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-----------gy~~l~avv~~ 320 (1019)
T KOG0203|consen 252 GIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-----------GYEWLRAVVFL 320 (1019)
T ss_pred EEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-----------cchhHHHhhhh
Confidence 9999999999999999998888889999999999998877776666666666543333 34567788888
Q ss_pred HHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCC
Q 002354 525 CSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ 604 (932)
Q Consensus 525 i~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~ 604 (932)
+.+++..+|.+|+..++..+....++++++++++|++++.|.+|...+||.|||||||+|.|.|.++|.++.........
T Consensus 321 i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~ 400 (1019)
T KOG0203|consen 321 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTE 400 (1019)
T ss_pred heeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876544322111
Q ss_pred CC------CCCCCHHHHHHHHHHhcc----------------cCCCcHHHHHHHHHHhcCCc--cccccCCCeEEecCCe
Q 002354 605 NP------IHPLSETEILKFAAGVES----------------NTVHPIGKAIVEAAEFSNCQ--NVKVADGTFIEEPGSG 660 (932)
Q Consensus 605 ~~------~~~~~~~~ll~laa~~e~----------------~s~hPi~~Ai~~~a~~~~~~--~~~~~~~~~~~~~g~g 660 (932)
+. ..+-.-.++.+.+..+.. -..++.+.|++++++...-. ..+.+.....++|...
T Consensus 401 ~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNS 480 (1019)
T KOG0203|consen 401 DQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNS 480 (1019)
T ss_pred hhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCccc
Confidence 00 011122344444332211 12578888999887643211 1111111112222111
Q ss_pred -----eEEEE-------cCeEEEeecHHHHhhcCCCCc------hhhhH--HH-------HHhCCCeE------------
Q 002354 661 -----TVAII-------EDRKVSVGTIDWLRSHGVDTS------TFQEV--EM-------EDLMNQSL------------ 701 (932)
Q Consensus 661 -----~~~~i-------~~~~~~~Gs~~~i~~~~~~~~------~~~~~--~~-------~~~~g~~~------------ 701 (932)
+.... +--.+.||++|.+.++|.... +..+. +. ....|.++
T Consensus 481 t~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~ 560 (1019)
T KOG0203|consen 481 TNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEK 560 (1019)
T ss_pred ccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhc
Confidence 11110 112377899999999886421 11000 00 00111111
Q ss_pred -----EEE-------EECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------
Q 002354 702 -----VYV-------GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------- 760 (932)
Q Consensus 702 -----~~v-------a~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--------- 760 (932)
.+- -.++.|+|++.+-|++|..+++++.+||.+||+|+|+|||++.||+++|++.||-.
T Consensus 561 ~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~ 640 (1019)
T KOG0203|consen 561 FPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDI 640 (1019)
T ss_pred CCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhh
Confidence 110 12568999999999999999999999999999999999999999999999999621
Q ss_pred ------------------------------------------CceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHH
Q 002354 761 ------------------------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAA 798 (932)
Q Consensus 761 ------------------------------------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~a 798 (932)
+.||||.+|+||+-||+.+|+.|..|+.+|||+||+||
T Consensus 641 a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPA 720 (1019)
T KOG0203|consen 641 AKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPA 720 (1019)
T ss_pred HHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChh
Confidence 15899999999999999999999999999999999999
Q ss_pred HHhCCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccc--c
Q 002354 799 LASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTM--L 875 (932)
Q Consensus 799 l~~A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~--l 875 (932)
||.|||||||| .|+|.+|++||++|++|||..|+.-+++||.+|+|+||.|.|.++.|+--|...+..+ ++|+- +
T Consensus 721 LKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi--~~giPLpl 798 (1019)
T KOG0203|consen 721 LKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI--LFGIPLPL 798 (1019)
T ss_pred hcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH--HhCCCccc
Confidence 99999999999 9999999999999999999999999999999999999999999999987554332211 23432 2
Q ss_pred cHHHHHHHhhhhHHHHHHHhhhhccccccccccccCCCCCC-CCCCccccccc
Q 002354 876 TPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR-VNSNVDSHQLM 927 (932)
Q Consensus 876 ~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~ 927 (932)
+++ ..+..-+ ..-+..|+.| .+.+++.++++++|++ ++-..-.|+|.
T Consensus 799 gti-tIL~IDL--gTDmvPAiSL--AYE~aEsDIM~r~PR~p~~D~LVN~rLi 846 (1019)
T KOG0203|consen 799 GTV-TILCIDL--GTDIVPAISL--AYEKAESDIMLRPPRNPKDDKLVNKRLI 846 (1019)
T ss_pred chh-hhhhhHh--hcccchhhhH--hccCchhhHHhcCCCCCcccccccchhH
Confidence 232 2222222 2233445555 4566777889999997 77777777664
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-65 Score=584.84 Aligned_cols=568 Identities=19% Similarity=0.250 Sum_probs=424.4
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcC-CCEEee
Q 002354 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP-GDRIPA 401 (932)
Q Consensus 323 ~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~-Ge~IPa 401 (932)
+.|+..++.++.+.+.+..+..|..++.+..++++.+. +..++|+|+ |.+++|+++||+||||+.+.+ +-..||
T Consensus 211 d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~----g~~~ti~S~eLVPGDil~i~~~~~~~Pc 285 (1140)
T KOG0208|consen 211 DSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRD----GFWETVDSSELVPGDILYIPPPGKIMPC 285 (1140)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEEC----CEEEEEeccccccccEEEECCCCeEeec
Confidence 45666677777778888888888888888888877665 578889987 589999999999999999999 899999
Q ss_pred eEEEEeeeeEEeccccccCCCceeecCC-------------------Cccccceeeec------CcEEEEEEecCCcchH
Q 002354 402 DGVVRAGRSTVDESSFTGEPLPVTKIPE-------------------SEVAAGSINLN------GTLTVEVRRPGGETAM 456 (932)
Q Consensus 402 Dgvll~G~~~VDES~LTGES~Pv~K~~g-------------------~~V~aGt~v~~------G~~~~~V~~tG~~T~~ 456 (932)
|++|++|+|.||||||||||+|+.|.+- +.+|+||.+++ +...+.|++||.+|..
T Consensus 286 Da~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~K 365 (1140)
T KOG0208|consen 286 DALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTK 365 (1140)
T ss_pred ceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccc
Confidence 9999999999999999999999999873 24899999874 6799999999999999
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcc
Q 002354 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCAL 536 (932)
Q Consensus 457 gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL 536 (932)
|+++|.+.+++....++.+.+.++. ....+++++.|++..+. ....|.+....+.+++.++.+.+|+||
T Consensus 366 GqLVRsilyPkP~~fkfyrds~~fi----~~l~~ia~~gfiy~~i~-------l~~~g~~~~~iiirsLDliTi~VPPAL 434 (1140)
T KOG0208|consen 366 GQLVRSILYPKPVNFKFYRDSFKFI----LFLVIIALIGFIYTAIV-------LNLLGVPLKTIIIRSLDLITIVVPPAL 434 (1140)
T ss_pred cHHHHhhcCCCCcccHHHHHHHHHH----HHHHHHHHHHHHHHhHh-------HHHcCCCHHHHhhhhhcEEEEecCCCc
Confidence 9999999998877766666555543 33334444444432221 123456778899999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCC------------
Q 002354 537 GLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ------------ 604 (932)
Q Consensus 537 ~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~------------ 604 (932)
|-+.++....+++|+.|+||.+-+++.+...|++|++|||||||||++.+.+..+.+.....+.....
T Consensus 435 PAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1140)
T KOG0208|consen 435 PAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFY 514 (1140)
T ss_pred hhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhcccee
Confidence 99999999999999999999999999999999999999999999999999999998754321111000
Q ss_pred --CCCCCCCH-HHHHHHHHHhccc---------CCCcHHHHHHHHHHhcC---------------Ccc--ccccCC---C
Q 002354 605 --NPIHPLSE-TEILKFAAGVESN---------TVHPIGKAIVEAAEFSN---------------CQN--VKVADG---T 652 (932)
Q Consensus 605 --~~~~~~~~-~~ll~laa~~e~~---------s~hPi~~Ai~~~a~~~~---------------~~~--~~~~~~---~ 652 (932)
.......+ ..+. ++.+.++ ..+|++..+.+...+.- ... .++... .
T Consensus 515 ~l~~~~~~~~~~~~~--~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~ 592 (1140)
T KOG0208|consen 515 KLSLRSSSLPMGNLV--AAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQ 592 (1140)
T ss_pred eccccccCCchHHHH--HHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccC
Confidence 00000001 1111 1112222 24677766555432210 000 001000 0
Q ss_pred --------------eEEecC-CeeEEEE--cC----eEEEeecHHHHhhcCCCCc---h-hhhHHHHHhCCCeEEEEEE-
Q 002354 653 --------------FIEEPG-SGTVAII--ED----RKVSVGTIDWLRSHGVDTS---T-FQEVEMEDLMNQSLVYVGV- 706 (932)
Q Consensus 653 --------------~~~~~g-~g~~~~i--~~----~~~~~Gs~~~i~~~~~~~~---~-~~~~~~~~~~g~~~~~va~- 706 (932)
|++.+. +.+...+ .+ ..|.||+||.|.+.|.+.. + .+..+.+..+|++++.+|.
T Consensus 593 ~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K 672 (1140)
T KOG0208|consen 593 STECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVIALASK 672 (1140)
T ss_pred CCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecC
Confidence 000010 1111112 11 2499999999999997542 2 2334557889999999875
Q ss_pred --------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----
Q 002354 707 --------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----- 761 (932)
Q Consensus 707 --------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----- 761 (932)
|.+|+|+|.|++++|++++.+|++|++++|+++|+||||..||..+||+||+-+.
T Consensus 673 ~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~ 752 (1140)
T KOG0208|consen 673 ELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVI 752 (1140)
T ss_pred ccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEE
Confidence 6789999999999999999999999999999999999999999999999998210
Q ss_pred ------------------------------------------------------------------------------ce
Q 002354 762 ------------------------------------------------------------------------------KV 763 (932)
Q Consensus 762 ------------------------------------------------------------------------------~v 763 (932)
.|
T Consensus 753 ~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~V 832 (1140)
T KOG0208|consen 753 IPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTV 832 (1140)
T ss_pred EEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeE
Confidence 69
Q ss_pred ecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 002354 764 LSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMK 843 (932)
Q Consensus 764 ~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 843 (932)
||||+|+||.++|+.||+.|+.|+|||||.||+.||++|||||+++++ +|.-+|.++-...+++.|+++|++||+.+-
T Consensus 833 fARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaALV 910 (1140)
T KOG0208|consen 833 FARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAALV 910 (1140)
T ss_pred EeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhhhh
Confidence 999999999999999999999999999999999999999999999754 577789999888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccccccccccCCCCCC
Q 002354 844 TVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR 916 (932)
Q Consensus 844 ~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~ 916 (932)
+-...++|...|.++...... .+|. .+..++-.. ++..--++.+.-++.+. ++.+.+....++||.+
T Consensus 911 TSf~~FkYMalYs~iqFisv~-~LY~-~~~nl~D~Q---fl~iDLlii~pia~~m~-~~~a~~~L~~~rP~~~ 977 (1140)
T KOG0208|consen 911 TSFACFKYMALYSAIQFISVV-FLYL-INSNLGDLQ---FLFIDLLIITPIAVMMS-RFDASDKLFPKRPPTN 977 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHhhh-eeee-ecccccchh---hhhhHHHHHHHHHHHHc-cCcHHHHhcCCCCCcc
Confidence 999999999999987654332 2332 233333332 22222233333334443 3345555556666654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-62 Score=527.29 Aligned_cols=561 Identities=25% Similarity=0.332 Sum_probs=427.9
Q ss_pred HHHHHHHHHhhc----CCCCchhHHHHHHHHHHHHHHHHHhccc-cccchhhhhHHHHHH-HHHHHHHHHHHHHHHhHHH
Q 002354 280 QLILDGVKSLFK----GAPNMNTLVGLGAVSSFTVSSLAALVPK-LGWKAFFEEPIMLIA-FVLLGKNLEQRAKIKATSD 353 (932)
Q Consensus 280 ~~~~~a~~~l~~----~~~nmd~Li~l~~~~a~~~s~~~~~~~~-~~~~~yf~~~~~il~-~~llg~~le~~~~~ka~~~ 353 (932)
+-++.+|+.|.- +.| .-+++.++++.+.++.++.-+++. .....|+....++++ -+++..+-|..++.|....
T Consensus 15 ~A~~~af~KL~P~~~~kNP-VMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAq 93 (681)
T COG2216 15 QALKDAFKKLNPRVLVKNP-VMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQ 93 (681)
T ss_pred HHHHHHHHhcChHHhhhCC-eEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 444555555532 223 334556666666655555444432 122334433333333 3667888888887777666
Q ss_pred HHhhhccCC-CeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCC---
Q 002354 354 MTGLLGILP-SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPE--- 429 (932)
Q Consensus 354 l~~L~~~~p-~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g--- 429 (932)
...|++... ..+++++++ |+++.|++.+|+.||+|+|+.||.||+||.|++|.+.||||.+||||-||-|..|
T Consensus 94 AdsLr~~~~~~~A~~l~~~---g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAITGESaPViresGgD~ 170 (681)
T COG2216 94 ADSLRKTKTETIARLLRAD---GSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGDF 170 (681)
T ss_pred HHHHHHHHHHHHHHHhcCC---CCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhccCCCcceeeccCCCc
Confidence 666665433 356666654 6899999999999999999999999999999999999999999999999999998
Q ss_pred CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccc
Q 002354 430 SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPT 509 (932)
Q Consensus 430 ~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~ 509 (932)
+.|-.||.+.+..++++++....+|++.|++.+++.++.+|+|-+--+.-+..-++.+.++.....+-+..+.+
T Consensus 171 ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~------ 244 (681)
T COG2216 171 SSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG------ 244 (681)
T ss_pred ccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC------
Confidence 77999999999999999999999999999999999999999998766554433333222211111111111110
Q ss_pred hhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEE
Q 002354 510 AIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 589 (932)
Q Consensus 510 ~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~ 589 (932)
+.. ..+...++++++.+|-..+--.+.-=..++.+..+.+++-+++.++|..|.+|+++.|||||+|.|+-.-.
T Consensus 245 ----g~~--~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~ 318 (681)
T COG2216 245 ----GGA--ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS 318 (681)
T ss_pred ----CCC--cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhh
Confidence 111 13345677888888888877777666788999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCC-CeEEecC------CeeE
Q 002354 590 KVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADG-TFIEEPG------SGTV 662 (932)
Q Consensus 590 ~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~-~~~~~~g------~g~~ 662 (932)
++++. ++.+++++.+.+....-..+.|-.+.|++.+++.+......... ..+++|. .|+.
T Consensus 319 ~f~p~-------------~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd 385 (681)
T COG2216 319 EFIPV-------------PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVD 385 (681)
T ss_pred heecC-------------CCCCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceeccccccc
Confidence 98886 77889999988888888889999999999999876543221111 1122221 1222
Q ss_pred EEEcCeEEEeecHHHHhhcCC----C-Cch-hhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCC
Q 002354 663 AIIEDRKVSVGTIDWLRSHGV----D-TST-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI 736 (932)
Q Consensus 663 ~~i~~~~~~~Gs~~~i~~~~~----~-~~~-~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi 736 (932)
. -++++++||+.+.++++-. . ... ....++-+..|.+.+.+..|++++|.+.++|.++|+.+|-+.+||++||
T Consensus 386 ~-~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgI 464 (681)
T COG2216 386 L-PGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGI 464 (681)
T ss_pred C-CCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCC
Confidence 1 1237899999988865422 1 111 1223345677999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHH
Q 002354 737 GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816 (932)
Q Consensus 737 ~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~ 816 (932)
+++|+||||+.||..+|++.|++ ++.++.+||+|.+.|+.-|.+|+.|+|+|||+||+|||++||||+||.+|++.||
T Consensus 465 kTvM~TGDN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAk 542 (681)
T COG2216 465 KTVMITGDNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 542 (681)
T ss_pred eEEEEeCCCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHH
Confidence 99999999999999999999998 8999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhhcccc
Q 002354 817 EVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFG----YNIVGIPIAAGVLLPVTG 872 (932)
Q Consensus 817 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~----~N~i~i~la~~~~~~~~g 872 (932)
|++..|=++.|...+.+.+++|++.+-+=----.|++. .=+..||..+...+|-.+
T Consensus 543 EAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~ 602 (681)
T COG2216 543 EAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLG 602 (681)
T ss_pred HhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999865331111122221 123456665556666555
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-62 Score=539.92 Aligned_cols=498 Identities=23% Similarity=0.295 Sum_probs=398.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeee-
Q 002354 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR- 409 (932)
Q Consensus 331 ~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~- 409 (932)
.|+.++++...+....+.++.+....|+.-+..++.|+|| |+|.++.+++||||||+.++.|++||||++|++|+
T Consensus 102 gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRD----Gkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~ 177 (942)
T KOG0205|consen 102 GICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRD----GKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP 177 (942)
T ss_pred hhheeeeecceeeeeeccccchHHHHHHhccCcccEEeec----CeeeeeeccccccCceeeeccCCEecCccceecCCc
Confidence 3344444544444444556777788888888889999998 69999999999999999999999999999999997
Q ss_pred eEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHH
Q 002354 410 STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVI 489 (932)
Q Consensus 410 ~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl 489 (932)
..||+|.|||||.|+.|.+||++|+||.+.+|++.++|++||.+|+.|+-..++.. ......+|+-++.+..++...+.
T Consensus 178 LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~ 256 (942)
T KOG0205|consen 178 LKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIA 256 (942)
T ss_pred cccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999987 45566788888887665543332
Q ss_pred HHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHH-hhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcc
Q 002354 490 ALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVA-CPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFA 568 (932)
Q Consensus 490 ~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva-~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg 568 (932)
+--++.+++.+... ...+......+.++++. +|.++|..++++++++..+++++|.++|+..++|.++
T Consensus 257 ~g~lie~~vmy~~q-----------~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemA 325 (942)
T KOG0205|consen 257 LGMLIEITVMYPIQ-----------HRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (942)
T ss_pred HHHHHHHHhhhhhh-----------hhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhh
Confidence 21111111111111 12233444556666766 9999999999999999999999999999999999999
Q ss_pred cccEEEecCCCCcccCceEEEE--EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhc-ccCCCcHHHHHHHHHHhcCCcc
Q 002354 569 MVNTVVFDKTGTLTIGRPVVTK--VVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE-SNTVHPIGKAIVEAAEFSNCQN 645 (932)
Q Consensus 569 ~v~~I~fDKTGTLT~g~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e-~~s~hPi~~Ai~~~a~~~~~~~ 645 (932)
.+|++|.|||||||.|+++|.+ +... ..+.++++++-.++... ....+.+++|++.....- +.
T Consensus 326 GmdVLCSDKTGTLTlNkLSvdknl~ev~------------v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dP--Ke 391 (942)
T KOG0205|consen 326 GMDVLCSDKTGTLTLNKLSVDKNLIEVF------------VKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADP--KE 391 (942)
T ss_pred CceEEeecCcCceeecceecCcCcceee------------ecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCH--HH
Confidence 9999999999999999999987 3222 25566777776665544 345578899998876541 11
Q ss_pred ccccCCCeEEecCC----eeEEEEc---C--eEEEeecHHHHhhcCCCCchh-----hhHHHHHhCCCeEEEEEEC----
Q 002354 646 VKVADGTFIEEPGS----GTVAIIE---D--RKVSVGTIDWLRSHGVDTSTF-----QEVEMEDLMNQSLVYVGVD---- 707 (932)
Q Consensus 646 ~~~~~~~~~~~~g~----g~~~~i~---~--~~~~~Gs~~~i~~~~~~~~~~-----~~~~~~~~~g~~~~~va~~---- 707 (932)
.......+++.|.. .+..++. | .++.||+|+++.+.|....+. +...+++..|.+-+.+++.
T Consensus 392 ara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e 471 (942)
T KOG0205|consen 392 ARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPE 471 (942)
T ss_pred HhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhcccc
Confidence 11111223333432 2333332 2 358899999999887643322 2234466678777777752
Q ss_pred ---------CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------------------
Q 002354 708 ---------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------------ 760 (932)
Q Consensus 708 ---------~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------------ 760 (932)
.+++|+.-+-|++|.+..++|++-...|+.|.|+|||...-++..++++|+-.
T Consensus 472 ~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~ 551 (942)
T KOG0205|consen 472 KTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMP 551 (942)
T ss_pred ccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCC
Confidence 37999999999999999999999999999999999999999999999999732
Q ss_pred ----------CceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhH
Q 002354 761 ----------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ 830 (932)
Q Consensus 761 ----------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~ 830 (932)
.+-|+.+.|++|.++|+.||++++.++|.|||.||+|+|+.||+|||+.+++|.|+.++|+|++...++.
T Consensus 552 ~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSv 631 (942)
T KOG0205|consen 552 GSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (942)
T ss_pred CCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchh
Confidence 1457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 831 LLVALELSRLTMKTVKQNLWWAFGYNIV 858 (932)
Q Consensus 831 i~~~i~~gR~~~~~i~~nl~~a~~~N~i 858 (932)
+..++..+|.+|++++..-.|+++..+-
T Consensus 632 iI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 632 IISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred hHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 9999999999999999988888776554
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-58 Score=577.94 Aligned_cols=596 Identities=18% Similarity=0.160 Sum_probs=422.1
Q ss_pred HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Q 002354 279 FQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358 (932)
Q Consensus 279 ~~~~~~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~ 358 (932)
|.|++..+...+++..|+.+|+..-+-....+| + .+...++.+.++++++..+++++|++.++|+++.++
T Consensus 100 ~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s------~-~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N--- 169 (1178)
T PLN03190 100 FSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA------V-FGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN--- 169 (1178)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc------c-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc---
Confidence 567777777788888999988643322111111 1 123445667788888999999999999999998765
Q ss_pred ccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe-----eeeEEeccccccCCCceeecCCC---
Q 002354 359 GILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPES--- 430 (932)
Q Consensus 359 ~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~-----G~~~VDES~LTGES~Pv~K~~g~--- 430 (932)
++.++|+++ |+++++++++|+|||+|.|++||+||||++|++ |.++||||.||||+.|+.|.+++
T Consensus 170 ---~~~~~v~~~----~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~ 242 (1178)
T PLN03190 170 ---NRLAWVLVD----DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETL 242 (1178)
T ss_pred ---CcEEEEEEC----CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhh
Confidence 578888876 588999999999999999999999999999997 88999999999999999997542
Q ss_pred ------------------------------------------ccccceeeecC-cEEEEEEecCCcchHHHHHHHHHHhh
Q 002354 431 ------------------------------------------EVAAGSINLNG-TLTVEVRRPGGETAMGDIVRLVEEAQ 467 (932)
Q Consensus 431 ------------------------------------------~V~aGt~v~~G-~~~~~V~~tG~~T~~gki~~~v~~a~ 467 (932)
.++.|+.+.+. .+.+.|++||.+|... ..-..+.
T Consensus 243 ~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~---~N~~~~~ 319 (1178)
T PLN03190 243 SKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM---LNNSGAP 319 (1178)
T ss_pred hcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh---hcCCCCC
Confidence 24455555555 4899999999999732 2233345
Q ss_pred cCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcc---C-cccchhcc--------C-----CcH----HHHHHHHHH
Q 002354 468 SREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA---H-VLPTAIQY--------G-----GPV----SLALQLSCS 526 (932)
Q Consensus 468 ~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~---~-~~~~~~~~--------~-----~~~----~~~l~~ai~ 526 (932)
.+++++++.++++..++..+.+++|++++++...+.. . .+...++. . ..+ ...+...+.
T Consensus 320 ~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~li 399 (1178)
T PLN03190 320 SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVI 399 (1178)
T ss_pred CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 6789999999999988877777777776655432211 0 00000000 0 001 122333345
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHhhhc----------CccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCC
Q 002354 527 VLVVACPCALGLATPTAMLVGTSLGATR----------GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGS 596 (932)
Q Consensus 527 vLvva~P~aL~la~p~a~~~~~~~~a~~----------gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~ 596 (932)
++-..+|..|.+.+.++.......+.++ .+.+|+.+..|+||+|++||+|||||||+|+|++.++...+.
T Consensus 400 l~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~ 479 (1178)
T PLN03190 400 VFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479 (1178)
T ss_pred HHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCE
Confidence 5557899999999999996655555443 267999999999999999999999999999999999988665
Q ss_pred CCCCCC----------------CC-CCCC--------------CCC-H-----HHHHH-HHHH--h-----c--------
Q 002354 597 LTDPNS----------------KQ-NPIH--------------PLS-E-----TEILK-FAAG--V-----E-------- 623 (932)
Q Consensus 597 ~~~~~~----------------~~-~~~~--------------~~~-~-----~~ll~-laa~--~-----e-------- 623 (932)
.|+... +. .+.. +.+ + .+++. ++-+ + +
T Consensus 480 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~ 559 (1178)
T PLN03190 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVK 559 (1178)
T ss_pred EcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcccc
Confidence 443110 00 0000 000 0 12222 2211 1 1
Q ss_pred ---ccCCCcHHHHHHHHHHhcCCccccccCC-----------C------eEEecCCeeEEE-Ec---C--eEEEeecHHH
Q 002354 624 ---SNTVHPIGKAIVEAAEFSNCQNVKVADG-----------T------FIEEPGSGTVAI-IE---D--RKVSVGTIDW 677 (932)
Q Consensus 624 ---~~s~hPi~~Ai~~~a~~~~~~~~~~~~~-----------~------~~~~~g~g~~~~-i~---~--~~~~~Gs~~~ 677 (932)
..+.+|.+.|+++++...|+........ . +.+.+.+..+.+ +. + ..++||+++.
T Consensus 560 ~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~ 639 (1178)
T PLN03190 560 LMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTS 639 (1178)
T ss_pred ceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHH
Confidence 1234899999999999888632211111 1 112222222222 21 2 2489999999
Q ss_pred HhhcCCCCch-------hhhHHHHHhCCCeEEEEE--------------------------------------ECCEEEE
Q 002354 678 LRSHGVDTST-------FQEVEMEDLMNQSLVYVG--------------------------------------VDNMLAG 712 (932)
Q Consensus 678 i~~~~~~~~~-------~~~~~~~~~~g~~~~~va--------------------------------------~~~~~lG 712 (932)
|.+.|..... .+..++++.+|.+++.++ .|++++|
T Consensus 640 il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG 719 (1178)
T PLN03190 640 MFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILG 719 (1178)
T ss_pred HHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEE
Confidence 9988853211 122334667788887765 2668999
Q ss_pred EEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------------------------
Q 002354 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------------------------------- 760 (932)
Q Consensus 713 ~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-------------------------------- 760 (932)
+++++|++|++++++|+.|+++|++++|+|||+..||.+||++|||-.
T Consensus 720 ~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~ 799 (1178)
T PLN03190 720 ASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTT 799 (1178)
T ss_pred EEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999999999999999999777610
Q ss_pred --------------------------------C----------------ceecccChhhHHHHHHHHhhC-CCEEEEEcC
Q 002354 761 --------------------------------D----------------KVLSGVKPNEKKRFINELQND-ENVVAMVGD 791 (932)
Q Consensus 761 --------------------------------~----------------~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGD 791 (932)
+ .++||++|+||.++|+.+|+. ++.|+|+||
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGD 879 (1178)
T PLN03190 800 VSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGD 879 (1178)
T ss_pred cccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 0 268999999999999999987 578999999
Q ss_pred CcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhh
Q 002354 792 GINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIPIA-AGVLL 868 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~-~gR~~~~~i~~nl~~a~~~N~i~i~la-~~~~~ 868 (932)
|.||++||++|||||++. .....|..+||+.+. .|..+.+++- +||..++++.+-+.|.|..|++....- ...++
T Consensus 880 GaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~ 957 (1178)
T PLN03190 880 GANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLF 957 (1178)
T ss_pred CcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999873 222378889999995 7888988887 599999999999999999999755443 32222
Q ss_pred ccccccccHHHHH-HHhhhhHHHHHHHhhhh
Q 002354 869 PVTGTMLTPSIAG-ALMGLSSIGVMANSLLL 898 (932)
Q Consensus 869 ~~~g~~l~P~~aa-~~m~~ssl~v~lnsl~l 898 (932)
.|+.-+|+.-. .++..+.+...+.-+.+
T Consensus 958 --~~fSg~~ly~~~~~~~yN~~fTslPii~~ 986 (1178)
T PLN03190 958 --TCFTLTTAINEWSSVLYSVIYTALPTIVV 986 (1178)
T ss_pred --HcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34334444433 34444444444444333
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=473.36 Aligned_cols=514 Identities=21% Similarity=0.233 Sum_probs=366.7
Q ss_pred HHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcC---CCEEeeeEEEEeeeeEEeccccccC
Q 002354 344 QRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP---GDRIPADGVVRAGRSTVDESSFTGE 420 (932)
Q Consensus 344 ~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~---Ge~IPaDgvll~G~~~VDES~LTGE 420 (932)
.+++.|+...++.+ ..-|..+.|+|+ ++|+.+..+||.|||+|.|.. ...||||.+|+.|.|.|||+|||||
T Consensus 235 V~Qrm~~lse~R~M-g~kpy~I~v~R~----kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~GsciVnEaMLtGE 309 (1160)
T KOG0209|consen 235 VKQRMRTLSEFRTM-GNKPYTINVYRN----KKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSCIVNEAMLTGE 309 (1160)
T ss_pred HHHHHHHHHHHHhc-CCCceEEEEEec----CcceeccccccCCCceEEeccCcccCcCCceEEEEecceeechhhhcCC
Confidence 34444554555443 334778888887 489999999999999999987 5689999999999999999999999
Q ss_pred CCceeecCC-----------------Cccccceeee-------------cCcEEEEEEecCCcchHHHHHHHHHHhhcCC
Q 002354 421 PLPVTKIPE-----------------SEVAAGSINL-------------NGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (932)
Q Consensus 421 S~Pv~K~~g-----------------~~V~aGt~v~-------------~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~ 470 (932)
|.|..|.+- ..+|+||.++ +|-+.+.|++||++|..|+++|.+....++-
T Consensus 310 SvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aerv 389 (1160)
T KOG0209|consen 310 SVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERV 389 (1160)
T ss_pred CccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceee
Confidence 999999761 2489999886 5789999999999999999999888765554
Q ss_pred ChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccC-CcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 002354 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG-GPVSLALQLSCSVLVVACPCALGLATPTAMLVGTS 549 (932)
Q Consensus 471 ~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~-~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~ 549 (932)
+.-.+ -+.+|+.+.+++|++. .|+.|.... -.+ .+-++-+.-++-++.-.+|+-||+-.++|+-.++.
T Consensus 390 TaNn~----Etf~FILFLlVFAiaA--a~Yvwv~Gs-----kd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ 458 (1160)
T KOG0209|consen 390 TANNR----ETFIFILFLLVFAIAA--AGYVWVEGS-----KDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLI 458 (1160)
T ss_pred eeccH----HHHHHHHHHHHHHHHh--hheEEEecc-----cCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHH
Confidence 43322 2223333333333332 232221110 011 11233444455667777899999999999999999
Q ss_pred HhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH-----hc-
Q 002354 550 LGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAG-----VE- 623 (932)
Q Consensus 550 ~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~-----~e- 623 (932)
.++|.||+|..+-.+.-.|+||++|||||||||+..|.|.++--...... ...+......+.+..+|.+ +|
T Consensus 459 ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~---~~~~~s~~p~~t~~vlAscHsLv~le~ 535 (1160)
T KOG0209|consen 459 ALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG---ALTPASKAPNETVLVLASCHSLVLLED 535 (1160)
T ss_pred HHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc---cccchhhCCchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999865322111 1111122223334444433 23
Q ss_pred ccCCCcHHHHHHHHHHhcCCccc--cccCCC---------eEEe---cCCeeEEEEcC-------eEEEeecHHHHhhcC
Q 002354 624 SNTVHPIGKAIVEAAEFSNCQNV--KVADGT---------FIEE---PGSGTVAIIED-------RKVSVGTIDWLRSHG 682 (932)
Q Consensus 624 ~~s~hPi~~Ai~~~a~~~~~~~~--~~~~~~---------~~~~---~g~g~~~~i~~-------~~~~~Gs~~~i~~~~ 682 (932)
.-..+|+++|.++...+.-.... ..+..+ +++. ..+.+.+.+++ -...||+||.+++.-
T Consensus 536 ~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml 615 (1160)
T KOG0209|consen 536 KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEML 615 (1160)
T ss_pred cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHH
Confidence 33579999999998765321100 000000 1000 01112222221 125789999998865
Q ss_pred CCCch-h-hhHHHHHhCCCeEEEEEE---------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEE
Q 002354 683 VDTST-F-QEVEMEDLMNQSLVYVGV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 739 (932)
Q Consensus 683 ~~~~~-~-~~~~~~~~~g~~~~~va~---------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~ 739 (932)
.+... . +...++..+|.+++.+++ |++|.|++.|..++|+|++++|+.|++.+++++
T Consensus 616 ~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vv 695 (1160)
T KOG0209|consen 616 RDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVV 695 (1160)
T ss_pred HhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEE
Confidence 44332 2 224557788999998775 678999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCC----------------------------------------------------------
Q 002354 740 MLSGDKKNSAEYVASLVGIPKD---------------------------------------------------------- 761 (932)
Q Consensus 740 ~~TGd~~~~a~~ia~~~gi~~~---------------------------------------------------------- 761 (932)
|+||||+.||.++|+++||...
T Consensus 696 MITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~ 775 (1160)
T KOG0209|consen 696 MITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATD 775 (1160)
T ss_pred EEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhH
Confidence 9999999999999999998210
Q ss_pred ---------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHh---------------
Q 002354 762 ---------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASE--------------- 817 (932)
Q Consensus 762 ---------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~--------------- 817 (932)
.||||+.|.||..+|..|++.|+.++|||||+||+.||++||||||+=+++...++
T Consensus 776 ~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~ 855 (1160)
T KOG0209|consen 776 QLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPA 855 (1160)
T ss_pred HHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCch
Confidence 68999999999999999999999999999999999999999999999644331100
Q ss_pred --------------------------------------------------------hcCEEEeCCChhHHHHHHHHHHHH
Q 002354 818 --------------------------------------------------------VASVVLMGNRLSQLLVALELSRLT 841 (932)
Q Consensus 818 --------------------------------------------------------~ad~vl~~~~~~~i~~~i~~gR~~ 841 (932)
+|.+.-...+.+.|.++|+.||++
T Consensus 856 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRct 935 (1160)
T KOG0209|consen 856 KQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCT 935 (1160)
T ss_pred hhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchh
Confidence 111222233678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHH
Q 002354 842 MKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS 878 (932)
Q Consensus 842 ~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~ 878 (932)
+-+.-|-+.+ ++-|.+.-.....++|. -|.-++-.
T Consensus 936 LVtTlQMfKI-LALN~LisAYslSvlyl-dGVKfgD~ 970 (1160)
T KOG0209|consen 936 LVTTLQMFKI-LALNCLISAYSLSVLYL-DGVKFGDT 970 (1160)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhhh-cCceecch
Confidence 9888886665 55677665555555543 34444433
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=421.14 Aligned_cols=501 Identities=20% Similarity=0.241 Sum_probs=369.2
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeee
Q 002354 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402 (932)
Q Consensus 323 ~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaD 402 (932)
..|+.+..+++++.++.+.+|+..+++-++..++ +..+++.++ .....|+++|++||+|.+..+++||||
T Consensus 129 ~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns------e~y~~ltr~----~~~~~~Ss~i~vGDvi~v~K~~RVPAD 198 (1051)
T KOG0210|consen 129 STYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS------EKYTKLTRD----GTRREPSSDIKVGDVIIVHKDERVPAD 198 (1051)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhheeeccC----CcccccccccccccEEEEecCCcCCcc
Confidence 4677788899999999999999999887776653 334444332 233349999999999999999999999
Q ss_pred EEEE-----eeeeEEeccccccCCCceeecC-----------------------------------------------CC
Q 002354 403 GVVR-----AGRSTVDESSFTGEPLPVTKIP-----------------------------------------------ES 430 (932)
Q Consensus 403 gvll-----~G~~~VDES~LTGES~Pv~K~~-----------------------------------------------g~ 430 (932)
.+++ +|+|.|-+..|+||+..+.|-| ++
T Consensus 199 milLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~Lsven 278 (1051)
T KOG0210|consen 199 MILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVEN 278 (1051)
T ss_pred eEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccc
Confidence 9998 5889999999999999887744 24
Q ss_pred ccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccch
Q 002354 431 EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTA 510 (932)
Q Consensus 431 ~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~ 510 (932)
.++++|++.+|.+.+.|++||.+|+..- ....++.+-..++..++.+.+++..++++++++....- |
T Consensus 279 tLWanTVvAs~t~~gvVvYTG~dtRsvM---Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~---g------- 345 (1051)
T KOG0210|consen 279 TLWANTVVASGTAIGVVVYTGRDTRSVM---NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK---G------- 345 (1051)
T ss_pred eeeeeeeEecCcEEEEEEEecccHHHHh---ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh---c-------
Confidence 5899999999999999999999985421 11123334445667788888888777777776654431 1
Q ss_pred hccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhh----cCccccCchHHHhcccccEEEecCCCCcccCce
Q 002354 511 IQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGAT----RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRP 586 (932)
Q Consensus 511 ~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~----~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~ 586 (932)
.+.+|+..+.+.+.++-..+|..|-+-+-++...-.....+ .|.++|+.+.-|+||++.++.+|||||||+|+|
T Consensus 346 --~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM 423 (1051)
T KOG0210|consen 346 --FGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEM 423 (1051)
T ss_pred --CCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchh
Confidence 13577888999999999999999988888887666555543 388999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCC---------------CCCCCC-------CCCC---HHHHHHHHHH--h----c------ccCCCc
Q 002354 587 VVTKVVTSGSLTDPN---------------SKQNPI-------HPLS---ETEILKFAAG--V----E------SNTVHP 629 (932)
Q Consensus 587 ~v~~i~~~~~~~~~~---------------~~~~~~-------~~~~---~~~ll~laa~--~----e------~~s~hP 629 (932)
++.+++..--.+..+ ...+.. .+.+ .+.++.++-+ + | .+...|
T Consensus 424 ~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSP 503 (1051)
T KOG0210|consen 424 EFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASP 503 (1051)
T ss_pred eeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCC
Confidence 999998653222111 000000 1111 1122222221 1 1 123468
Q ss_pred HHHHHHHHHHhcCCccccccCC------------Ce--------EE-ecCCeeEEEEc--Ce--EEEeecHHHHhhcCCC
Q 002354 630 IGKAIVEAAEFSNCQNVKVADG------------TF--------IE-EPGSGTVAIIE--DR--KVSVGTIDWLRSHGVD 684 (932)
Q Consensus 630 i~~Ai~~~a~~~~~~~~~~~~~------------~~--------~~-~~g~g~~~~i~--~~--~~~~Gs~~~i~~~~~~ 684 (932)
.+-||++..+.-|......+.. ++ .. ....|+..+.+ ++ -|.||+.-.|...- .
T Consensus 504 DEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q 582 (1051)
T KOG0210|consen 504 DEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-Q 582 (1051)
T ss_pred CeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-c
Confidence 8888888776655442211100 11 11 12345555544 22 28899987775432 1
Q ss_pred Cc--hhhhHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEecccccHH
Q 002354 685 TS--TFQEVEMEDLMNQSLVYVGV---------------------------------------DNMLAGLIYVEDRIRDD 723 (932)
Q Consensus 685 ~~--~~~~~~~~~~~g~~~~~va~---------------------------------------~~~~lG~i~l~D~lr~~ 723 (932)
++ ..++..+.+.+|.+.+.++. |.+++|+.+.||+++++
T Consensus 583 ~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~d 662 (1051)
T KOG0210|consen 583 YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDD 662 (1051)
T ss_pred cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhh
Confidence 11 12233335566777777764 67899999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------------------------------------------
Q 002354 724 AAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------------------------------------- 760 (932)
Q Consensus 724 ~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------------------------------------- 760 (932)
++.+++.||++||++||+|||..+||..+|+..++..
T Consensus 663 Vk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl 742 (1051)
T KOG0210|consen 663 VKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCL 742 (1051)
T ss_pred hHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHH
Confidence 9999999999999999999999999999999999831
Q ss_pred ---------------CceecccChhhHHHHHHHHhhC-CCEEEEEcCCcccHHHHHhCCeeEEe-cCchHHHHhhcCEEE
Q 002354 761 ---------------DKVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALASSHIGVAM-GGGVGAASEVASVVL 823 (932)
Q Consensus 761 ---------------~~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ND~~al~~A~vgIa~-~~~~~~a~~~ad~vl 823 (932)
..++||++|+||+++++.+|++ |..|.+||||-||+.|+++||+||++ |+....|.-+||+-+
T Consensus 743 ~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI 822 (1051)
T KOG0210|consen 743 KYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI 822 (1051)
T ss_pred HHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccH
Confidence 1588999999999999999885 78999999999999999999999999 555567778999988
Q ss_pred eCCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 002354 824 MGNRLSQLLVALEL-SRLTMKTVKQNLWW 851 (932)
Q Consensus 824 ~~~~~~~i~~~i~~-gR~~~~~i~~nl~~ 851 (932)
. .+..+.+++-+ ||+.|++--+--+|
T Consensus 823 t--qF~Hv~rLLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 823 T--QFSHVSRLLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred H--HHHHHHHHhhccccchHHHHHHHHHH
Confidence 6 78889888876 99998775553333
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=439.12 Aligned_cols=560 Identities=16% Similarity=0.157 Sum_probs=412.7
Q ss_pred HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Q 002354 279 FQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLL 358 (932)
Q Consensus 279 ~~~~~~a~~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~ 358 (932)
+.|++..+...++|..|.++|+..-+...- +|- .++.....+.++++.+..+.+.+|++.|++.++.++
T Consensus 45 ~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-------~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN--- 113 (1151)
T KOG0206|consen 45 FTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-------FNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVN--- 113 (1151)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-------cCccceeeceeeeehHHHHHHHHhhhhhhhccHHhh---
Confidence 456667777777788899988754433222 221 122334445667788889999999999999998887
Q ss_pred ccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe-----eeeEEeccccccCCCceeecC-----
Q 002354 359 GILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIP----- 428 (932)
Q Consensus 359 ~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~-----G~~~VDES~LTGES~Pv~K~~----- 428 (932)
..+++|.++.+ .+++..+++|++||+|.+..+|.+|||.++++ |.|+|++++|+||+..+.|+.
T Consensus 114 ---~~~~~v~~~~~---~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~ 187 (1151)
T KOG0206|consen 114 ---NRKVEVLRGDG---CFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTS 187 (1151)
T ss_pred ---cceeEEecCCc---eeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhh
Confidence 45788887642 38899999999999999999999999999994 679999999999999988743
Q ss_pred ------------------------------------------CCccccceeeecCc-EEEEEEecCCcchHHHHHHHHHH
Q 002354 429 ------------------------------------------ESEVAAGSINLNGT-LTVEVRRPGGETAMGDIVRLVEE 465 (932)
Q Consensus 429 ------------------------------------------g~~V~aGt~v~~G~-~~~~V~~tG~~T~~gki~~~v~~ 465 (932)
.+.++.|+.+.+.. +.+.|+.||.+|.+.+- -..
T Consensus 188 ~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n---~~~ 264 (1151)
T KOG0206|consen 188 KLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN---SGK 264 (1151)
T ss_pred cccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh---cCC
Confidence 11356788888876 89999999999977653 334
Q ss_pred hhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccC---ccc-chhccCC----cHHHHHHHHHHHHHHHhhhcch
Q 002354 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAH---VLP-TAIQYGG----PVSLALQLSCSVLVVACPCALG 537 (932)
Q Consensus 466 a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~---~~~-~~~~~~~----~~~~~l~~ai~vLvva~P~aL~ 537 (932)
+..+++++++..++....+..+.+.++++..+...++... ..+ .++.... .....+..++.++...+|..|.
T Consensus 265 ~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLy 344 (1151)
T KOG0206|consen 265 PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLY 344 (1151)
T ss_pred CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEE
Confidence 7788999999999988777777777766665554333221 111 1122211 1234556677777888999999
Q ss_pred hhHHHHHHHHHHHhh----------hcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCC--
Q 002354 538 LATPTAMLVGTSLGA----------TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQN-- 605 (932)
Q Consensus 538 la~p~a~~~~~~~~a----------~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~-- 605 (932)
+.+.+.-........ .....+|+.+..|+||+|++|+.|||||||+|.|++.+|.+.+..|.......
T Consensus 345 vsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~ 424 (1151)
T KOG0206|consen 345 VSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEA 424 (1151)
T ss_pred EEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhc
Confidence 998887766654442 34788899999999999999999999999999999999999887665432110
Q ss_pred ----------------C---------C-------CCCCHHHHHHHHHH--------------hcccCCCcHHHHHHHHHH
Q 002354 606 ----------------P---------I-------HPLSETEILKFAAG--------------VESNTVHPIGKAIVEAAE 639 (932)
Q Consensus 606 ----------------~---------~-------~~~~~~~ll~laa~--------------~e~~s~hPi~~Ai~~~a~ 639 (932)
. . ......+.....+. +......|.+.|+++.|+
T Consensus 425 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr 504 (1151)
T KOG0206|consen 425 ALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAAR 504 (1151)
T ss_pred ccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHH
Confidence 0 0 00011122222221 122346899999999999
Q ss_pred hcCCccccccCCCeEEecCCe-------------------eEEEEc---C--eEEEeecHHHHhhcCCCCc-h-----hh
Q 002354 640 FSNCQNVKVADGTFIEEPGSG-------------------TVAIIE---D--RKVSVGTIDWLRSHGVDTS-T-----FQ 689 (932)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~g~g-------------------~~~~i~---~--~~~~~Gs~~~i~~~~~~~~-~-----~~ 689 (932)
..|+............. ..| ++..+. + ..|+||+...|.++..... . .+
T Consensus 505 ~~gf~f~~Rt~~~vti~-~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~ 583 (1151)
T KOG0206|consen 505 ELGFVFLGRTPDSVTIR-ELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQE 583 (1151)
T ss_pred hcCceeeeccCceEEEe-ccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHH
Confidence 98876543332222111 222 222221 1 2389999999877655311 1 11
Q ss_pred hHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEecccccHHHHHHHHHH
Q 002354 690 EVEMEDLMNQSLVYVGV--------------------------------------DNMLAGLIYVEDRIRDDAAHVVNSL 731 (932)
Q Consensus 690 ~~~~~~~~g~~~~~va~--------------------------------------~~~~lG~i~l~D~lr~~~~~~i~~L 731 (932)
..++++.+|.+.+++++ |+.++|..++||+++++++++|+.|
T Consensus 584 Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L 663 (1151)
T KOG0206|consen 584 HLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKL 663 (1151)
T ss_pred HHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHH
Confidence 23346677888888764 6789999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCCC-----------------------------------------------C---
Q 002354 732 SSQGIGVYMLSGDKKNSAEYVASLVGIPK-----------------------------------------------D--- 761 (932)
Q Consensus 732 ~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-----------------------------------------------~--- 761 (932)
+++|||+||+|||..+||.+|+..|++.. .
T Consensus 664 ~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aL 743 (1151)
T KOG0206|consen 664 AQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFAL 743 (1151)
T ss_pred HHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceE
Confidence 99999999999999999999999999721 0
Q ss_pred ----------------------------ceecccChhhHHHHHHHHhh-CCCEEEEEcCCcccHHHHHhCCeeEEec-Cc
Q 002354 762 ----------------------------KVLSGVKPNEKKRFINELQN-DENVVAMVGDGINDAAALASSHIGVAMG-GG 811 (932)
Q Consensus 762 ----------------------------~v~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~ 811 (932)
.++||++|.||+.+|+..++ .+..+++||||.||++|++.|||||+++ ..
T Consensus 744 VIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~E 823 (1151)
T KOG0206|consen 744 VIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQE 823 (1151)
T ss_pred EEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccch
Confidence 57899999999999999974 5789999999999999999999999996 55
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIP 861 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~-~gR~~~~~i~~nl~~a~~~N~i~i~ 861 (932)
-..|..++|+-+. .+.-+.+++- +||..+.++.+.+.+.|..|+....
T Consensus 824 GmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~ 872 (1151)
T KOG0206|consen 824 GMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTF 872 (1151)
T ss_pred hhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHH
Confidence 5677788998886 4554544443 5999999999999999999987543
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=307.70 Aligned_cols=223 Identities=28% Similarity=0.496 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCe-EEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEe-e
Q 002354 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK-ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-G 408 (932)
Q Consensus 331 ~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~-~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~-G 408 (932)
+++++++++.+++.+.++|+.+.++++.+..+++ ++|+|+ |+++++++++|+|||+|.+++||++||||+|++ |
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~----~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRD----GRWQKIPSSELVPGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEET----TEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEec----cccccchHhhccceeeeecccccccccCccceecc
Confidence 4677889999999999999999999999988887 888877 589999999999999999999999999999999 9
Q ss_pred eeEEeccccccCCCceeec-----CCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhh
Q 002354 409 RSTVDESSFTGEPLPVTKI-----PESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483 (932)
Q Consensus 409 ~~~VDES~LTGES~Pv~K~-----~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~ 483 (932)
.+.||||.+|||+.|+.|. .++.+++||.+.+|.+.++|++||.+|..+++.+.+.+++.+++++++..+++..+
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999999999 99999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchH
Q 002354 484 FTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNI 563 (932)
Q Consensus 484 ~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~ 563 (932)
+.+++++++++++++|++. ....+|...+..++++++++|||+|++++|+++..+..+++++|+++|++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFN---------DSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTG---------STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred HHhcccccchhhhccceec---------ccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 9999999888888776653 1223557789999999999999999999999999999999999999999999
Q ss_pred HHh
Q 002354 564 LEK 566 (932)
Q Consensus 564 lE~ 566 (932)
+|.
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=259.60 Aligned_cols=210 Identities=34% Similarity=0.510 Sum_probs=177.8
Q ss_pred ccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCcccccc
Q 002354 570 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVA 649 (932)
Q Consensus 570 v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~ 649 (932)
|++||||||||||+|++.+ . . .....++.++...+..+.||++.++..++...... ..
T Consensus 1 i~~i~fDktGTLt~~~~~v-----~-------------~-~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~~-- 58 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-----A-------------P-PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-KS-- 58 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-----E-------------S-CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-SC--
T ss_pred CeEEEEecCCCcccCeEEE-----E-------------e-ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-hh--
Confidence 6899999999999999999 1 1 45688999999999999999999999988763222 11
Q ss_pred CCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCc-hhhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHH
Q 002354 650 DGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVV 728 (932)
Q Consensus 650 ~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~-~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i 728 (932)
...+...+++|+...+++. +. |+++++.+.+.... ...........+...++++.+..++|.+.+.|++|++++++|
T Consensus 59 ~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l 136 (215)
T PF00702_consen 59 LESFSEFIGRGISGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEAL 136 (215)
T ss_dssp CEEEEEETTTEEEEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHH
T ss_pred hhhheeeeecccccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhh
Confidence 3567888999999999888 55 99999887654321 111111223445667788889999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc--ChhhH--HHHHHHHhhCCCEEEEEcCCcccHHHHHhCC
Q 002354 729 NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEK--KRFINELQNDENVVAMVGDGINDAAALASSH 803 (932)
Q Consensus 729 ~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~--~p~~K--~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~ 803 (932)
+.|+++|++++|+|||+..++..+++++||....+++++ +|++| .++++.|+.+++.|+|||||.||++|+++||
T Consensus 137 ~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 137 QELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhhhccCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999999999999999866799999 99999 9999999977789999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.9e-16 Score=140.27 Aligned_cols=126 Identities=29% Similarity=0.465 Sum_probs=113.2
Q ss_pred ECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCE
Q 002354 706 VDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 706 ~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~ 785 (932)
.-++..+.++-.-++=+++.++|++|++. +++++.|||...+..+.|+-.||+.+++++...|+.|.++++.|++.+++
T Consensus 17 ~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k 95 (152)
T COG4087 17 KAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEK 95 (152)
T ss_pred ecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcE
Confidence 34567788888888999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEe-c--CchHHHHhhcCEEEeCCChhHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAM-G--GGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~-~--~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
|.|||||.||.+||+.||+||.. + +...-+.++||+|+. ++..+.++
T Consensus 96 ~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 96 VVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred EEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 99999999999999999999877 3 566778899999985 45444443
|
|
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=102.85 Aligned_cols=62 Identities=34% Similarity=0.561 Sum_probs=58.6
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFK 198 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~ 198 (932)
+|.|+||+|++|+.+|+++|.++|||.++++|+.++++.|.|+++..++ ++|.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~--------~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSI--------EKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCH--------HHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCH--------HHHHHHHHHhCcC
Confidence 5899999999999999999999999999999999999999999887666 8899999999995
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
| >COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4e-11 Score=102.41 Aligned_cols=68 Identities=35% Similarity=0.462 Sum_probs=62.6
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
....|+|+||+|++|+..|+++|++++||.+++||+..+++.|.+|+...+. +++.++++++||++..
T Consensus 2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~--------~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDI--------EAIIEAIEDAGYKVEE 69 (71)
T ss_pred ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCH--------HHHHHHHHHcCCCeee
Confidence 3578999999999999999999999999999999999999999999976665 8999999999998753
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-10 Score=126.00 Aligned_cols=134 Identities=21% Similarity=0.330 Sum_probs=103.0
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--C----------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D---------------- 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~---------------- 761 (932)
..+++..||+++.- ...+.+.++++|++|+++|++++++||++...+..+.+++|++. .
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 46777789998842 44699999999999999999999999999999999999999731 0
Q ss_pred ---------------------------------ceecc----------------c-----------------------Ch
Q 002354 762 ---------------------------------KVLSG----------------V-----------------------KP 769 (932)
Q Consensus 762 ---------------------------------~v~~~----------------~-----------------------~p 769 (932)
.++.. . .+
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEP 160 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCH
Confidence 01100 0 00
Q ss_pred hhHHHHHHHHhhC--------------------------------------CCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 NEKKRFINELQND--------------------------------------ENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~~K~~~v~~l~~~--------------------------------------g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
++..++.+.+.+. ...|+++||+.||.+||+.|++|+||+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA 240 (270)
T PRK10513 161 EILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA 240 (270)
T ss_pred HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc
Confidence 0001111122110 13488999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+.+|+.||+|+.+++-++|.++|+
T Consensus 241 ~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 241 IPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred cHHHHHhcCeeccCCCcchHHHHHH
Confidence 9999999999999999999999886
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=123.24 Aligned_cols=133 Identities=23% Similarity=0.275 Sum_probs=102.9
Q ss_pred eEEEEEECCEEEEEEEecc-cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCc----------------
Q 002354 700 SLVYVGVDNMLAGLIYVED-RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK---------------- 762 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D-~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~---------------- 762 (932)
..++...||+++- .| .+.+.+.++|++|++.|++++++||++...+..+.+++|++...
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 4677778888873 33 48899999999999999999999999999999999999985210
Q ss_pred -------------------------eecc------------------------------------------cChh--hHH
Q 002354 763 -------------------------VLSG------------------------------------------VKPN--EKK 773 (932)
Q Consensus 763 -------------------------v~~~------------------------------------------~~p~--~K~ 773 (932)
.+.. +.|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 0000 0000 022
Q ss_pred HHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 774 RFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 774 ~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.-++.+.++ ...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-++|.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 222222211 235899999999999999999999999999999999999999999999999886
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-10 Score=121.89 Aligned_cols=132 Identities=21% Similarity=0.239 Sum_probs=104.1
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCc------------------
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK------------------ 762 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~------------------ 762 (932)
.+++..||+++. =..++.+.+.++|++|++.|++++++||++...+..++++++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 567778888874 23358999999999999999999999999999999999999985210
Q ss_pred ---------------------------------------------------------eecccC--hhhHHHHHHHHhhC-
Q 002354 763 ---------------------------------------------------------VLSGVK--PNEKKRFINELQND- 782 (932)
Q Consensus 763 ---------------------------------------------------------v~~~~~--p~~K~~~v~~l~~~- 782 (932)
.+..+. .-+|...++.+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 000111 12344444444332
Q ss_pred ---CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 783 ---ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 783 ---g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-++|.+++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 23589999999999999999999999999999999999999988888888753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=126.20 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=101.6
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..||+++. -...+.+.++++|++|+++|++++++||++...+..+.+++|++..
T Consensus 3 kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 3 RLAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred cEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEE
Confidence 4567778888874 2346999999999999999999999999999999999999998421
Q ss_pred -----------------------------ceecc------------------------------------cChhhHHHHH
Q 002354 762 -----------------------------KVLSG------------------------------------VKPNEKKRFI 776 (932)
Q Consensus 762 -----------------------------~v~~~------------------------------------~~p~~K~~~v 776 (932)
.++.. ..+++-.++.
T Consensus 80 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 159 (272)
T PRK15126 80 RQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ 159 (272)
T ss_pred eecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH
Confidence 00000 0011101111
Q ss_pred HHHhh----------------------------------C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh
Q 002354 777 NELQN----------------------------------D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 818 (932)
Q Consensus 777 ~~l~~----------------------------------~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ 818 (932)
+.+++ . ...|+++||+.||.+||+.|+.||||+|+.+.+|+.
T Consensus 160 ~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~ 239 (272)
T PRK15126 160 IQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAE 239 (272)
T ss_pred HHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHh
Confidence 11211 0 134889999999999999999999999999999999
Q ss_pred cCE--EEeCCChhHHHHHHH
Q 002354 819 ASV--VLMGNRLSQLLVALE 836 (932)
Q Consensus 819 ad~--vl~~~~~~~i~~~i~ 836 (932)
||+ |+.+++-++|.++|+
T Consensus 240 A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 240 LPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred CCCCeecCCCcchHHHHHHH
Confidence 996 777899999999885
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=124.85 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=101.9
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..||+++- -..++.+.+.++|++|+++|++++++||++...+..+.+++|++..
T Consensus 3 kli~~DlDGTLl~---~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 3 QVVASDLDGTLLS---PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred eEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEeh
Confidence 4667778898873 2346899999999999999999999999999999999999997420
Q ss_pred ------------------------------ceec-cc------------------------------------ChhhHHH
Q 002354 762 ------------------------------KVLS-GV------------------------------------KPNEKKR 774 (932)
Q Consensus 762 ------------------------------~v~~-~~------------------------------------~p~~K~~ 774 (932)
.++. +. .+++..+
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~ 159 (266)
T PRK10976 80 SHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLP 159 (266)
T ss_pred hhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHH
Confidence 0010 00 0111111
Q ss_pred HHHHHhhC--------------------------------------CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHH
Q 002354 775 FINELQND--------------------------------------ENVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816 (932)
Q Consensus 775 ~v~~l~~~--------------------------------------g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~ 816 (932)
+.+.+++. ...|+++||+.||.+||+.|+.|+||+||.+.+|
T Consensus 160 ~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK 239 (266)
T PRK10976 160 LEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLK 239 (266)
T ss_pred HHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHH
Confidence 11222210 1348899999999999999999999999999999
Q ss_pred hhcC--EEEeCCChhHHHHHHH
Q 002354 817 EVAS--VVLMGNRLSQLLVALE 836 (932)
Q Consensus 817 ~~ad--~vl~~~~~~~i~~~i~ 836 (932)
+.|| .|+.+++-++|.++++
T Consensus 240 ~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 240 DLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HhCCCCeecccCchHHHHHHHH
Confidence 9988 7888999999999886
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.8e-10 Score=122.73 Aligned_cols=136 Identities=21% Similarity=0.256 Sum_probs=106.0
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------- 761 (932)
...+++..||+++. =..++.+.++++|+++++.|++++++||++...+..+.++++++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 79 (264)
T COG0561 3 IKLLAFDLDGTLLD---SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLF 79 (264)
T ss_pred eeEEEEcCCCCccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEe
Confidence 35677777888764 2334999999999999999999999999999999999999998521
Q ss_pred ------------------------cee-----------------------------------------cccChh------
Q 002354 762 ------------------------KVL-----------------------------------------SGVKPN------ 770 (932)
Q Consensus 762 ------------------------~v~-----------------------------------------~~~~p~------ 770 (932)
.++ ....++
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T COG0561 80 QKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELV 159 (264)
T ss_pred eecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHH
Confidence 000 000011
Q ss_pred -----------------------------hHHHHHHHHhh-CC---CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHh
Q 002354 771 -----------------------------EKKRFINELQN-DE---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASE 817 (932)
Q Consensus 771 -----------------------------~K~~~v~~l~~-~g---~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~ 817 (932)
+|..-++.+.+ .| ..|+++||+.||.+||+.|+.||||+|+.+.+++
T Consensus 160 ~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~ 239 (264)
T COG0561 160 EALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKE 239 (264)
T ss_pred HHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHh
Confidence 23333333322 12 2499999999999999999999999999999999
Q ss_pred hcCEEEeCCChhHHHHHHHH
Q 002354 818 VASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 818 ~ad~vl~~~~~~~i~~~i~~ 837 (932)
.||++..+++-++|.++++.
T Consensus 240 ~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 240 LADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred hCCcccCCccchHHHHHHHH
Confidence 99999899999999999874
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.1e-10 Score=110.81 Aligned_cols=106 Identities=19% Similarity=0.185 Sum_probs=87.5
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQN----DENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A 802 (932)
+|++|+++|+++.++|+++...+..+.+++|+. .++... ..|.+.++.+.+ ....++|+||+.||.+|++.|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 455443 345555555533 346799999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALE 836 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~ 836 (932)
+++++|.++.+..+..+|+++.++.-++ +.++++
T Consensus 112 g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 112 GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 9999999999999999999998765444 555544
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.8e-10 Score=125.16 Aligned_cols=115 Identities=21% Similarity=0.289 Sum_probs=100.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 781 (932)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .++++ +..+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 57999999999999999999999999988899999999996 33321 234678888888765
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 782 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 782 ~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+ .+.+++||||.||.+|++.|++|||| ++.+.+++.||+++..++++++..++-
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 3 36799999999999999999999999 899999999999999999999988754
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.6e-10 Score=116.04 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=99.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec--------c-------cChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS--------G-------VKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~--------~-------~~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.|+.|++.| +++++||.....+..+++++|++ .+++ + ..++.|...++.+++.+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999997 3443 1 34678999999998888
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
..+.|+|||.||.+|++.||++|++. +.+..++.||-.-.-.+.+.+..++.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 88999999999999999999999996 5567777777666667888888888876
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.1e-10 Score=116.99 Aligned_cols=130 Identities=22% Similarity=0.265 Sum_probs=99.2
Q ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCc---------------------
Q 002354 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK--------------------- 762 (932)
Q Consensus 704 va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--------------------- 762 (932)
+..|++++- =...+.+.+.++|++|++.|++++++||++...+..+.+++|++...
T Consensus 3 ~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~ 79 (225)
T TIGR01482 3 SDIDGTLTD---PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAY 79 (225)
T ss_pred EeccCccCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecc
Confidence 445677663 12358899999999999999999999999999999999999963210
Q ss_pred ----------------------------------------------------e-------ecccCh--hhHHHHHHHHhh
Q 002354 763 ----------------------------------------------------V-------LSGVKP--NEKKRFINELQN 781 (932)
Q Consensus 763 ----------------------------------------------------v-------~~~~~p--~~K~~~v~~l~~ 781 (932)
+ +..+.| -.|..-++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 80 LEEEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred cCHHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 0 000111 134444444433
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhH----HHHHHH
Q 002354 782 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ----LLVALE 836 (932)
Q Consensus 782 ~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 836 (932)
+ ...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-++ |.++++
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 2 246999999999999999999999999999999999999999888888 666654
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2e-09 Score=117.53 Aligned_cols=134 Identities=17% Similarity=0.266 Sum_probs=101.9
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..||+++. =..++.+.++++|++|+++|++++++||++...+..+.++++++..
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l 80 (272)
T PRK10530 4 RVIALDLDGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVL 80 (272)
T ss_pred cEEEEeCCCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEE
Confidence 4677788999873 2335899999999999999999999999999999999999997421
Q ss_pred ------------------------------ceecccC-------------------------------------------
Q 002354 762 ------------------------------KVLSGVK------------------------------------------- 768 (932)
Q Consensus 762 ------------------------------~v~~~~~------------------------------------------- 768 (932)
.++..-.
T Consensus 81 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 160 (272)
T PRK10530 81 EADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFAL 160 (272)
T ss_pred EecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEE
Confidence 0000000
Q ss_pred --h-hhH-HHHHHHHhhC---------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 769 --P-NEK-KRFINELQND---------------------------------E---NVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 769 --p-~~K-~~~v~~l~~~---------------------------------g---~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
+ .+| .++.+.+.+. | ..+++|||+.||.+|++.|++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 161 THEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred ecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 0 000 0111111110 1 3488999999999999999999999
Q ss_pred cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 809 GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 809 ~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|++.+..++.||+|+.+++-++|.++++
T Consensus 241 gna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 241 GNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred cCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 9999999999999999999999999886
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=128.99 Aligned_cols=136 Identities=19% Similarity=0.298 Sum_probs=103.6
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------C--
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------D-- 761 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--------------~-- 761 (932)
....+++..||+++. -..++.+.+.++|++|+++|++++++||++...+..+.+++++.. +
T Consensus 307 ~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA 383 (580)
T PLN02887 307 KFSYIFCDMDGTLLN---SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGL 383 (580)
T ss_pred CccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCe
Confidence 456788888999884 234699999999999999999999999999999999999887520 0
Q ss_pred ----------------------------------------ceecc-c---------------------------------
Q 002354 762 ----------------------------------------KVLSG-V--------------------------------- 767 (932)
Q Consensus 762 ----------------------------------------~v~~~-~--------------------------------- 767 (932)
.+|.. -
T Consensus 384 ~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~K 463 (580)
T PLN02887 384 LVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQK 463 (580)
T ss_pred EEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeE
Confidence 01100 0
Q ss_pred -----ChhhH-HHHHHHHhhC--------------------------------------CCEEEEEcCCcccHHHHHhCC
Q 002354 768 -----KPNEK-KRFINELQND--------------------------------------ENVVAMVGDGINDAAALASSH 803 (932)
Q Consensus 768 -----~p~~K-~~~v~~l~~~--------------------------------------g~~v~~vGDg~ND~~al~~A~ 803 (932)
.+++. ..+.+.+++. ...|+++||+.||.+||+.|+
T Consensus 464 i~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG 543 (580)
T PLN02887 464 VIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLAS 543 (580)
T ss_pred EEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCC
Confidence 00000 0111111110 125899999999999999999
Q ss_pred eeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 804 IGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 804 vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.||||+||.+.+|+.||+|+.+|+-++|.++|+
T Consensus 544 ~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 544 LGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 999999999999999999999999999999886
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=108.16 Aligned_cols=109 Identities=22% Similarity=0.265 Sum_probs=87.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh--hhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCC
Q 002354 726 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP--NEKKRFINELQNDENVVAMVGDGINDAAALASSH 803 (932)
Q Consensus 726 ~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p--~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~ 803 (932)
..|+.|++.|+++.++|+.+...+..+.+.+|+. .+|....| +....+++.+.-....++||||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 5789999999999999999999999999999997 56555533 3334444444434467999999999999999999
Q ss_pred eeEEecCchHHHHhhcCEEEeCCChhHH-HHHHH
Q 002354 804 IGVAMGGGVGAASEVASVVLMGNRLSQL-LVALE 836 (932)
Q Consensus 804 vgIa~~~~~~~a~~~ad~vl~~~~~~~i-~~~i~ 836 (932)
+++||+++.+.+++.|++|+..++-+++ .++++
T Consensus 119 ~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e 152 (169)
T TIGR02726 119 LAVAVGDAVADVKEAAAYVTTARGGHGAVREVAE 152 (169)
T ss_pred CeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHH
Confidence 9999999999999999999876555443 44433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=115.11 Aligned_cols=129 Identities=22% Similarity=0.294 Sum_probs=100.3
Q ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC----------------------
Q 002354 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------------- 761 (932)
Q Consensus 704 va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~---------------------- 761 (932)
+..||+++- =...+.+.+.++|++|+++|+++++.||++...+..+.++++++..
T Consensus 3 ~DlDGTLl~---~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i 79 (254)
T PF08282_consen 3 SDLDGTLLN---SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPI 79 (254)
T ss_dssp EECCTTTCS---TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB
T ss_pred EEECCceec---CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhhe
Confidence 344555532 3456889999999999999999999999999999999999997420
Q ss_pred ---------------------------------------------------------------ceec-------------
Q 002354 762 ---------------------------------------------------------------KVLS------------- 765 (932)
Q Consensus 762 ---------------------------------------------------------------~v~~------------- 765 (932)
.+..
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~ 159 (254)
T PF08282_consen 80 DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREE 159 (254)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHH
T ss_pred eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhh
Confidence 0000
Q ss_pred -------------------ccCh--hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcC
Q 002354 766 -------------------GVKP--NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 820 (932)
Q Consensus 766 -------------------~~~p--~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad 820 (932)
.++| -.|..-++.+.+ ..+.++++||+.||.+||+.++.|+||+++++..++.||
T Consensus 160 l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 160 LKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp HHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred hccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 1122 345555555543 235799999999999999999999999999999999999
Q ss_pred EEEeCCChhHHHHHH
Q 002354 821 VVLMGNRLSQLLVAL 835 (932)
Q Consensus 821 ~vl~~~~~~~i~~~i 835 (932)
+++..++-++|.++|
T Consensus 240 ~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 240 YITPSNNDDGVAKAI 254 (254)
T ss_dssp EEESSGTCTHHHHHH
T ss_pred EEecCCCCChHHHhC
Confidence 999987779998875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.6e-09 Score=111.99 Aligned_cols=131 Identities=22% Similarity=0.375 Sum_probs=98.2
Q ss_pred EEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------------
Q 002354 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------- 761 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------- 761 (932)
+++..||+++-- ..++.+++.++|++|+++|++++++||++...+..+.+++|++..
T Consensus 2 i~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~ 78 (256)
T TIGR00099 2 IFIDLDGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKK 78 (256)
T ss_pred EEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeec
Confidence 455667887741 346889999999999999999999999999999999999997410
Q ss_pred ---------------------------ceecc--------------------------------------cChhhHHHHH
Q 002354 762 ---------------------------KVLSG--------------------------------------VKPNEKKRFI 776 (932)
Q Consensus 762 ---------------------------~v~~~--------------------------------------~~p~~K~~~v 776 (932)
.++.. ..+++..++.
T Consensus 79 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T TIGR00099 79 PLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLI 158 (256)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHH
Confidence 00000 0011111222
Q ss_pred HHHhh-----------------------------------C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHh
Q 002354 777 NELQN-----------------------------------D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASE 817 (932)
Q Consensus 777 ~~l~~-----------------------------------~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~ 817 (932)
+.+++ . ...++++||+.||.+|++.|++++||+++.+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~ 238 (256)
T TIGR00099 159 EALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKA 238 (256)
T ss_pred HHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHH
Confidence 22221 0 13488999999999999999999999999999999
Q ss_pred hcCEEEeCCChhHHHHHH
Q 002354 818 VASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 818 ~ad~vl~~~~~~~i~~~i 835 (932)
.||+++.+++-++|.++|
T Consensus 239 ~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 239 LADYVTDSNNEDGVALAL 256 (256)
T ss_pred hCCEEecCCCCcchhhhC
Confidence 999999999999987753
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.8e-08 Score=103.22 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=97.8
Q ss_pred CCCeEEEEEECCEEEEE-EEe---cccccHHHH---HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh
Q 002354 697 MNQSLVYVGVDNMLAGL-IYV---EDRIRDDAA---HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~-i~l---~D~lr~~~~---~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p 769 (932)
.+.+.+.+..|++++.- +.+ ..++++... .+|+.|+++|+++.++||++...+..+++++|+. .+|...
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g~-- 94 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQGQ-- 94 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecCC--
Confidence 35778888888887731 111 112233333 6899999999999999999999999999999997 566543
Q ss_pred hhHHHHHHHHhh-C---CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC
Q 002354 770 NEKKRFINELQN-D---ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827 (932)
Q Consensus 770 ~~K~~~v~~l~~-~---g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~ 827 (932)
++|...++.+.+ . ...++||||+.||.+|++.|+++++++++.+..+..||+++..+.
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 456666555433 2 357999999999999999999999999888999999999997543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=107.44 Aligned_cols=113 Identities=23% Similarity=0.348 Sum_probs=93.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 781 (932)
+++|++.+.++.|++.|++++++|+.....+..+.+.+|++ .+++. ..+..|.++++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 57999999999999999999999999999999999999997 34431 122347777776544
Q ss_pred CC----CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHH
Q 002354 782 DE----NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 782 ~g----~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
+. ..++||||+.||.+|++.|+++++++ +.+..++.||+++.++++..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 32 46999999999999999999999995 568888999999999998877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.6e-08 Score=105.78 Aligned_cols=106 Identities=23% Similarity=0.255 Sum_probs=85.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------ceecc-cChhhHHHHHHHHhh-
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVLSG-VKPNEKKRFINELQN- 781 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------~v~~~-~~p~~K~~~v~~l~~- 781 (932)
.+++|++.+.++.++++|.+++++||-...-+..+|+++|++.. .+... +..+.|...++.+.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999631 11111 345789888876655
Q ss_pred CCC---EEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEe
Q 002354 782 DEN---VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 782 ~g~---~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~ 824 (932)
.|. .+.++|||.||.|||+.|+.+|++. ..+..+..|+....
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~~ 200 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRIW 200 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhcC
Confidence 344 5999999999999999999999996 33445666665554
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2e-08 Score=96.01 Aligned_cols=115 Identities=21% Similarity=0.267 Sum_probs=94.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHh
Q 002354 726 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALAS 801 (932)
Q Consensus 726 ~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~ 801 (932)
..|+.|.+.|+++.++||++...++.-|+++||+ .+|-.. ++|....+.|.++ .+.|+++||..||.|+|+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeech--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 4688999999999999999999999999999997 677544 5788777777553 4579999999999999999
Q ss_pred CCeeEEecCchHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHH
Q 002354 802 SHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKT 844 (932)
Q Consensus 802 A~vgIa~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~ 844 (932)
.++++|+.++.+..++.||+|+..+. ...+.++|-.++..+..
T Consensus 118 vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 118 VGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred cCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 99999999999999999999998653 33444555555554433
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.9e-08 Score=104.99 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=51.5
Q ss_pred CCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 697 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
+....++...||+++- =...+.+.++++|++|+++|++++++||++...+..+.+++|++
T Consensus 5 ~~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 5 QDPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3567788888999874 13346788999999999999999999999999999999999984
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.7e-08 Score=99.35 Aligned_cols=91 Identities=27% Similarity=0.476 Sum_probs=80.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-------------------ChhhHHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-------------------KPNEKKRFINEL 779 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-------------------~p~~K~~~v~~l 779 (932)
++.|+++|.+..||++|.+++++||.-..-+..+|.++||+..++||+. .-..|.++++.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 5689999999999999999999999999999999999999976677652 235699999999
Q ss_pred hhC--CCEEEEEcCCcccHHHHHhCCeeEEec
Q 002354 780 QND--ENVVAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 780 ~~~--g~~v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
++. -..++|||||.||.+|+..||.=|+.+
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 883 347999999999999999988888876
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.4e-07 Score=103.24 Aligned_cols=135 Identities=18% Similarity=0.236 Sum_probs=100.4
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------ceec------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------KVLS------ 765 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------~v~~------ 765 (932)
..++++..||+++.- .+.+.++++++|++|+++|++++++||++...+..+.+++|++.. .++.
T Consensus 4 ~kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~ 80 (273)
T PRK00192 4 KLLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFP 80 (273)
T ss_pred ceEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccc
Confidence 356777889988842 346788899999999999999999999999999999999997421 1110
Q ss_pred ----------------c-c----------------------------------------------------------Chh
Q 002354 766 ----------------G-V----------------------------------------------------------KPN 770 (932)
Q Consensus 766 ----------------~-~----------------------------------------------------------~p~ 770 (932)
. + +++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T PRK00192 81 FQPDGERLKGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEA 160 (273)
T ss_pred cCCccccccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchH
Confidence 0 0 000
Q ss_pred -----------------------------hHHHHHHHHhh----CC-CEEEEEcCCcccHHHHHhCCeeEEecCchHHHH
Q 002354 771 -----------------------------EKKRFINELQN----DE-NVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816 (932)
Q Consensus 771 -----------------------------~K~~~v~~l~~----~g-~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~ 816 (932)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+|
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 161 AKERFEEALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 01111111111 23 789999999999999999999999999999999
Q ss_pred ----hhc-CEEE--eCCChhHHHHHHH
Q 002354 817 ----EVA-SVVL--MGNRLSQLLVALE 836 (932)
Q Consensus 817 ----~~a-d~vl--~~~~~~~i~~~i~ 836 (932)
..| +.+. ..++-+++.++++
T Consensus 241 ~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 241 PLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred ccCccccCCceEEecCCCcHHHHHHHH
Confidence 666 6777 5677889988876
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.2e-07 Score=95.71 Aligned_cols=114 Identities=19% Similarity=0.254 Sum_probs=90.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-------------c--cChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------G--VKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-------------~--~~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|++. +++ . ..|+.|...++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPT--LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCch--hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3579999999999999 9999999999999999999999862 221 1 24678889999998888
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++||||+.||.+|.+.|++|+..+...+.....++..+ -+++..+.+.++
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~-~~~~~el~~~l~ 196 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPA-VHTYDELLAAID 196 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccc-cCCHHHHHHHHH
Confidence 9999999999999999999999998765444444556522 246666665544
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.8e-07 Score=98.71 Aligned_cols=53 Identities=21% Similarity=0.103 Sum_probs=47.0
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCch---HHHHhh--c-CEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGV---GAASEV--A-SVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+||+.|+.||||+|+. +..|+. | ++|+.+++-++|.++++
T Consensus 195 ~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 195 IKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred ceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 35999999999999999999999999997 478886 4 58888999999999886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=97.82 Aligned_cols=131 Identities=18% Similarity=0.231 Sum_probs=94.7
Q ss_pred EEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------------
Q 002354 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------- 761 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------- 761 (932)
++...|++++. .|+--++..++++ ++++|++++++||++...+..+.+++++...
T Consensus 2 i~~DlDgTLl~----~~~~~~~~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~ 76 (236)
T TIGR02471 2 IITDLDNTLLG----DDEGLASFVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPD 76 (236)
T ss_pred eEEeccccccC----CHHHHHHHHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCC
Confidence 34456777775 4444444456666 6999999999999999999999999987310
Q ss_pred -------------------------------------ceecccChh----------------------------------
Q 002354 762 -------------------------------------KVLSGVKPN---------------------------------- 770 (932)
Q Consensus 762 -------------------------------------~v~~~~~p~---------------------------------- 770 (932)
.+..+..|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~ 156 (236)
T TIGR02471 77 RFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPL 156 (236)
T ss_pred hhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeC
Confidence 000111121
Q ss_pred --hHHHHHHHHhhC-C---CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcC----EEEeCCChhHHHHHHHH
Q 002354 771 --EKKRFINELQND-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS----VVLMGNRLSQLLVALEL 837 (932)
Q Consensus 771 --~K~~~v~~l~~~-g---~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~~ 837 (932)
.|...++.+.++ | ..++++||+.||.+||+.++.||+|+|+.+.+++.|| +|...++-.++.++|+.
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 222333333221 1 2588999999999999999999999999999999999 88888888999998863
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.9e-07 Score=93.18 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=79.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 781 (932)
+++|++.+.++.|+++|++++++|+.....+..+++.+|+. .+++. ..|..|.+.++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 57899999999999999999999999999999999999986 33321 223466666666544
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcC
Q 002354 782 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 820 (932)
Q Consensus 782 ~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad 820 (932)
+ .+.++||||+.||.+|++.||++++++......+.++|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 2 35699999999999999999999999755444555544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.40 E-value=2e-06 Score=91.06 Aligned_cols=114 Identities=22% Similarity=0.427 Sum_probs=86.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------------------cChhhHHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------------VKPNEKKRFINEL 779 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------------------~~p~~K~~~v~~l 779 (932)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|++...+++. .....|.+.++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 368999999999999999999999999999999999999974334431 0123587888777
Q ss_pred hhC--CCEEEEEcCCcccHHHHHh--CCeeEEecCc--hHHHHhhcCEEEeCCChhHHHHH
Q 002354 780 QND--ENVVAMVGDGINDAAALAS--SHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 780 ~~~--g~~v~~vGDg~ND~~al~~--A~vgIa~~~~--~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
.++ ...++||||+.||..|.+. +++.++.+.. .+.....+|+++. ++..+.+.
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 654 3579999999999999777 5666665532 2334556899884 56666554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-06 Score=91.93 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=98.6
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 761 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------- 761 (932)
+++...|++|+.---=..++.|...++++++++.|+.++++||++...++.+.+++++...
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~ 82 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVP 82 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcC
Confidence 3455567888731111467889999999999999999999999999999999999987421
Q ss_pred --------------------------------------c--ee----------------------------c-----ccC
Q 002354 762 --------------------------------------K--VL----------------------------S-----GVK 768 (932)
Q Consensus 762 --------------------------------------~--v~----------------------------~-----~~~ 768 (932)
. ++ + .+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~ 162 (249)
T TIGR01485 83 DQHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDIL 162 (249)
T ss_pred CHHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEE
Confidence 0 00 0 011
Q ss_pred h--hhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHh-CCeeEEecCchHHHHhhcC-------EEEeCCChhHHHHH
Q 002354 769 P--NEKKRFINELQND----ENVVAMVGDGINDAAALAS-SHIGVAMGGGVGAASEVAS-------VVLMGNRLSQLLVA 834 (932)
Q Consensus 769 p--~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~-A~vgIa~~~~~~~a~~~ad-------~vl~~~~~~~i~~~ 834 (932)
| ..|...++.+.+. ...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++.....-+++.++
T Consensus 163 ~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~ 242 (249)
T TIGR01485 163 PQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEA 242 (249)
T ss_pred eCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHH
Confidence 1 1233334443321 2469999999999999998 6799999999999997654 66666677888888
Q ss_pred HH
Q 002354 835 LE 836 (932)
Q Consensus 835 i~ 836 (932)
++
T Consensus 243 l~ 244 (249)
T TIGR01485 243 IA 244 (249)
T ss_pred HH
Confidence 76
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.8e-06 Score=88.41 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=86.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------cCh------------hhHHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------VKP------------NEKKR 774 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------~~p------------~~K~~ 774 (932)
.+++|++.+.++.|++.|+++.++|+........+.+.++.. +.+++. ..| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 368999999999999999999999999999999999888543 344431 112 24889
Q ss_pred HHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 775 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 775 ~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+++.++.....++|||||.||..|++.||+.+|-+.-.+..++.---...-+++..|...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99998888888999999999999999999977754222222221111222256777766654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.28 E-value=3e-06 Score=89.51 Aligned_cols=114 Identities=19% Similarity=0.269 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc---c----------Ch----------hhHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG---V----------KP----------NEKKRF 775 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~---~----------~p----------~~K~~~ 775 (932)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +..+.+++. . .| ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 57999999999999999999999999999999999998 754445532 1 11 248889
Q ss_pred HHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh--cCEEEeCCChhHHHHHH
Q 002354 776 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 776 v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~--ad~vl~~~~~~~i~~~i 835 (932)
++.++.....+.|||||.||+.|.+.||+.++-+.-.+.+++. +.+.+ +++..+...+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 9988888788999999999999999999977633111222222 33322 5677666654
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.5e-06 Score=89.45 Aligned_cols=79 Identities=32% Similarity=0.483 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------------cChh-h--HHHHHHHH------
Q 002354 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------VKPN-E--KKRFINEL------ 779 (932)
Q Consensus 722 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------------~~p~-~--K~~~v~~l------ 779 (932)
+++.+.|+.++++|++++|+||+....++.+++.+|++...+++. .++. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 777799999999999999999999999999999999986434332 2222 3 99999999
Q ss_pred hhCCCEEEEEcCCcccHHHHH
Q 002354 780 QNDENVVAMVGDGINDAAALA 800 (932)
Q Consensus 780 ~~~g~~v~~vGDg~ND~~al~ 800 (932)
+.....+.++|||.||.+||+
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 455789999999999999986
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=92.53 Aligned_cols=133 Identities=12% Similarity=0.108 Sum_probs=93.7
Q ss_pred EEEEEECCEEEEEEEecc--cccHHHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC----------------
Q 002354 701 LVYVGVDNMLAGLIYVED--RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------- 761 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D--~lr~~~~~~i-~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~---------------- 761 (932)
.++...|++++.- .| ++.+...+++ +++++.|+.++++||++......+.+++++...
T Consensus 11 lI~sDLDGTLL~~---~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~ 87 (413)
T PLN02382 11 MIVSDLDHTMVDH---HDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGES 87 (413)
T ss_pred EEEEcCCCcCcCC---CCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCC
Confidence 4444567888742 13 4554455555 899999999999999999999999999986321
Q ss_pred -----------------------------------------c--ee---------------------------------c
Q 002354 762 -----------------------------------------K--VL---------------------------------S 765 (932)
Q Consensus 762 -----------------------------------------~--v~---------------------------------~ 765 (932)
. ++ .
T Consensus 88 ~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~l 167 (413)
T PLN02382 88 MVPDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDL 167 (413)
T ss_pred CccChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEE
Confidence 0 00 0
Q ss_pred ccCh--hhHHHHHHHHhhC-------CCEEEEEcCCcccHHHHHhCC-eeEEecCchHHHHhhc--------CEEEe-CC
Q 002354 766 GVKP--NEKKRFINELQND-------ENVVAMVGDGINDAAALASSH-IGVAMGGGVGAASEVA--------SVVLM-GN 826 (932)
Q Consensus 766 ~~~p--~~K~~~v~~l~~~-------g~~v~~vGDg~ND~~al~~A~-vgIa~~~~~~~a~~~a--------d~vl~-~~ 826 (932)
.+.| -.|..-++.|.+. ...++++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. ++
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 1112 1244445544333 247899999999999999999 6999999999999753 55544 45
Q ss_pred ChhHHHHHHH
Q 002354 827 RLSQLLVALE 836 (932)
Q Consensus 827 ~~~~i~~~i~ 836 (932)
+-++|.++++
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 6788888876
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.11 E-value=9.9e-06 Score=84.23 Aligned_cols=91 Identities=18% Similarity=0.220 Sum_probs=75.5
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc------------------cChhhHHHHHHH
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG------------------VKPNEKKRFINE 778 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~------------------~~p~~K~~~v~~ 778 (932)
...+++++.+.++.++++|++++++|+.....+..+++.+|++ .+++. +..+.|.+.++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 4578999999999999999999999999999999999999996 23221 224678877776
Q ss_pred Hhh-CC---CEEEEEcCCcccHHHHHhCCeeEEec
Q 002354 779 LQN-DE---NVVAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 779 l~~-~g---~~v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
+.+ .+ ..+.++||+.||.+|++.|+.++++.
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 543 33 36899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.7e-06 Score=83.96 Aligned_cols=81 Identities=27% Similarity=0.390 Sum_probs=67.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-------------------ccChhhHHHHHHHHh
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------------GVKPNEKKRFINELQ 780 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-------------------~~~p~~K~~~v~~l~ 780 (932)
+++++.+.++.+++.|++++++||.....+..+++.+|++. +++ ...+..|...++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 57999999999999999999999999999999999999862 221 123477998988876
Q ss_pred hC----CCEEEEEcCCcccHHHHHhC
Q 002354 781 ND----ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 781 ~~----g~~v~~vGDg~ND~~al~~A 802 (932)
++ ...+.++|||.||.+|++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 35699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=86.42 Aligned_cols=133 Identities=21% Similarity=0.265 Sum_probs=92.9
Q ss_pred CCeEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCC------------C-
Q 002354 698 NQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGIPK------------D- 761 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l--~D~lr~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------~- 761 (932)
....+++..||+++-...= .-.+.++++++|++|++ .|+.++++||++...+..+.+.+++.- .
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGK 92 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCC
Confidence 3568888899998842110 12567899999999998 799999999999999999888776410 0
Q ss_pred -------------------------------------ceec---------------------------------ccCh--
Q 002354 762 -------------------------------------KVLS---------------------------------GVKP-- 769 (932)
Q Consensus 762 -------------------------------------~v~~---------------------------------~~~p-- 769 (932)
.++. ++.|
T Consensus 93 ~~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g 172 (266)
T PRK10187 93 THIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRG 172 (266)
T ss_pred eeeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCC
Confidence 0000 1111
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhC----CeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 770 NEKKRFINELQND----ENVVAMVGDGINDAAALASS----HIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A----~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+|...++.+.++ ...++++||+.||.+||+.+ +.||+||++. ..|++.+. +...+...+.
T Consensus 173 ~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 173 TNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 1343334433222 24689999999999999999 9999999874 45777774 6666666654
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.3e-05 Score=82.14 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=74.4
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceecc-----------c------------ChhhH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----------V------------KPNEK 772 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~~-----------~------------~p~~K 772 (932)
-++.+++.+.++.|++.|++++++|+.+......+.+..|+... .+++. . ....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 36889999999999999999999999999999999999998531 23321 0 11249
Q ss_pred HHHHHHHhhC-CCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 773 KRFINELQND-ENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 773 ~~~v~~l~~~-g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
.++++.++++ ...++|+|||.||..|.+.||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999887 8899999999999999999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.3e-05 Score=82.86 Aligned_cols=119 Identities=22% Similarity=0.281 Sum_probs=89.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|++.|++++++|+........+.+.+|+.. +.+++. ..| +--..+++.++.....+++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 4578999999999999999999999999999999999999853 222221 222 2224455555555678999
Q ss_pred EcCCcccHHHHHhCCe-eEEecC----chHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI-GVAMGG----GVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~----~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
|||+.||+.+.+.+++ +|.+.. ..+.....+++++ +++..+...++++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999999 566532 2344455788877 6888888877653
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.6e-05 Score=81.39 Aligned_cols=118 Identities=23% Similarity=0.336 Sum_probs=90.0
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-c------cChhhHHHHHHHHhhCCCEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G------VKPNEKKRFINELQNDENVVA 787 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~------~~p~~K~~~v~~l~~~g~~v~ 787 (932)
...+-|+++++++.|+++|++..++|+++...+..+.+.+|+... .+++ . -.|+......+.+....+.++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 446789999999999999999999999999999999999999632 2333 2 234444555555555545799
Q ss_pred EEcCCcccHHHHHhCC---eeEEecC--chHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 788 MVGDGINDAAALASSH---IGVAMGG--GVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~---vgIa~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||||..+|+.|-+.|+ +|+..|. ........+|+++. ++..+...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 9999999999999998 6666663 34566667999984 6777766543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.3e-05 Score=73.79 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=70.0
Q ss_pred ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CCceec-----------------------ccChh
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLS-----------------------GVKPN 770 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~v~~-----------------------~~~p~ 770 (932)
...++.+++.+.+++|++.|++++++||.....+..+.+++|+. .+.+++ .-.++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999982 223332 22233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcccHHHHHh-CCeeEE
Q 002354 771 EKKRFINELQNDENVVAMVGDGINDAAALAS-SHIGVA 807 (932)
Q Consensus 771 ~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~-A~vgIa 807 (932)
.+..+.+.+......++++||+.||..|++. ..-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 3444555555456789999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.3e-05 Score=79.04 Aligned_cols=115 Identities=18% Similarity=0.297 Sum_probs=84.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
++.+++.+++++|+++|+++.++|+.....+..+.+.+|+.. +.+++. ..| +--..+++.++-....++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 678999999999999999999999999999999999999953 233321 122 22234444444446779999
Q ss_pred cCCcccHHHHHhCCeeEE-e--c--CchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGVA-M--G--GGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa-~--~--~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.+|+.+-+.+++... + | +..+..++.+|+++ +++..+..++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 999999999999999643 3 3 23344566789887 4666666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00012 Score=85.84 Aligned_cols=94 Identities=16% Similarity=0.254 Sum_probs=75.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-----ccChhhHHHHHHHHhhCCCEEEEEcCCc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----GVKPNEKKRFINELQNDENVVAMVGDGI 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-----~~~p~~K~~~v~~l~~~g~~v~~vGDg~ 793 (932)
+++|++.+.+++++++|++++++|+-+...++.+++.+|+. +.+.+ +..|+.|.+.+++...+ +.+.++||..
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF-d~Vigsd~~~~~kg~~K~~~l~~~l~~-~~~~yvGDS~ 149 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF-DGVFASDGTTNLKGAAKAAALVEAFGE-RGFDYAGNSA 149 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CEEEeCCCccccCCchHHHHHHHHhCc-cCeeEecCCH
Confidence 46899999999999999999999999999999999999983 24443 34667787665543322 2367899999
Q ss_pred ccHHHHHhCCeeEEecCchHH
Q 002354 794 NDAAALASSHIGVAMGGGVGA 814 (932)
Q Consensus 794 ND~~al~~A~vgIa~~~~~~~ 814 (932)
||.++++.|+-.++++.+...
T Consensus 150 ~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 150 ADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred HHHHHHHhCCCeEEECCCHHH
Confidence 999999999999999865543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.7e-05 Score=91.34 Aligned_cols=71 Identities=30% Similarity=0.416 Sum_probs=66.6
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (932)
+..++|.||+|++|+..||+.|++++||.++.|.+..+.+.+.|||...+. +.+.+.++++||.+++.+..
T Consensus 70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~--------~~~~e~ie~~gf~a~~i~~~ 140 (951)
T KOG0207|consen 70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSP--------DSIAESIEDLGFSAELIESV 140 (951)
T ss_pred eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCc--------hhHHHHHHhcCccceehhcc
Confidence 678999999999999999999999999999999999999999999999887 88999999999999876553
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00018 Score=76.27 Aligned_cols=53 Identities=17% Similarity=0.336 Sum_probs=45.6
Q ss_pred EEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002354 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi 758 (932)
+++..|++++- .+...+++.++|++|+++|++++++||++...+..+.+++|+
T Consensus 2 i~~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 45566777663 456777899999999999999999999999999999999997
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00017 Score=75.69 Aligned_cols=115 Identities=18% Similarity=0.256 Sum_probs=82.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. +.+++ . -.|+--..+++.+......++||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 367999999999999999999999999999999999999963 12222 1 12232344445554445679999
Q ss_pred cCCcccHHHHHhCCeeE-Ee--cC-chH-HHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGV-AM--GG-GVG-AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI-a~--~~-~~~-~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||..+|..|-++|++-. ++ |. ..+ .....+|+++ +++..+..++
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 99999999999999853 23 32 222 3344688876 4777776654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00024 Score=76.71 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=49.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi 758 (932)
.+++...|++++- -.+...+.+.++|++|+++||.++++||+.......+.+++|+
T Consensus 2 KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 2 RLVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred cEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 3567778888874 3456788899999999999999999999999999999999997
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00021 Score=78.10 Aligned_cols=117 Identities=17% Similarity=0.222 Sum_probs=83.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccChhhH------HHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVKPNEK------KRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~p~~K------~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.++++.|++.|++++++|+.+...+..+.++.|+.. +.+++ ...+..| ..+.+.+.-....++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4678999999999999999999999999999999999999853 12322 2222222 2333333334567999
Q ss_pred EcCCcccHHHHHhCCee-EEecC----chHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIG-VAMGG----GVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~----~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||+.+.+.|++. +++.. ..+.....+|+++ +++..+.+++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 99999999999999983 44432 2333445788888 46777765533
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00022 Score=76.84 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=44.0
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 754 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~ 754 (932)
..++++..||+++. =..++.+.++++|++++++|++++++||++........+
T Consensus 5 ~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 46777888998872 233689999999999999999999999999997776654
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00051 Score=74.24 Aligned_cols=118 Identities=18% Similarity=0.261 Sum_probs=83.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CCceecc------------c-Ch----hhHHHHHHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG------------V-KP----NEKKRFINE 778 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~v~~~------------~-~p----~~K~~~v~~ 778 (932)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+. ...++++ . .| ..|.+.+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 357999999999999999999999999999999999999984 2234222 1 12 346554432
Q ss_pred -----Hh--hCCCEEEEEcCCcccHHHHHhC---CeeEEec--Cc-----hHHHHhhcCEEEeCCChhHHHHHH
Q 002354 779 -----LQ--NDENVVAMVGDGINDAAALASS---HIGVAMG--GG-----VGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 779 -----l~--~~g~~v~~vGDg~ND~~al~~A---~vgIa~~--~~-----~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
+. .....++++|||.||+.|..-. .--+.+| |. -+.-+++-|||+.+|.--.++..|
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 2346799999999999997644 2234444 32 234567889999987655555544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00011 Score=92.77 Aligned_cols=64 Identities=34% Similarity=0.583 Sum_probs=54.1
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
.++++.|+||+|++|+.+||++|++++||.+++||+. +..+..+ .++ +.+.++++++||++...
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~~ 66 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASA--------EALIETIKQAGYDASVS 66 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCH--------HHHHHHHHhcCCccccc
Confidence 4689999999999999999999999999999999995 4555533 233 78999999999998753
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00033 Score=73.27 Aligned_cols=113 Identities=17% Similarity=0.214 Sum_probs=79.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+.. +.+++. ..| +-=....+.+.-....++||
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 578999999999999999999999999999999999999852 223322 122 11133333443345679999
Q ss_pred cCCcccHHHHHhCCeeEE-e--cCc--hHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVA-M--GGG--VGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa-~--~~~--~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||..||+.+.+.|++-.. + |.. .+.....+|+++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 999999999999998754 3 322 223334688877 46666544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR00003 copper ion binding protein | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00038 Score=56.22 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=54.9
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
+..+.|.||+|.+|+..+++.+++.+++..+.+++..+.+.+.|++...+. ..+...+++.||.+
T Consensus 3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~ 67 (68)
T TIGR00003 3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATE--------ICIAEAILDAGYEV 67 (68)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCH--------HHHHHHHHHcCCCc
Confidence 456899999999999999999999999999999999999999997654443 55666678888864
|
This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00046 Score=82.32 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=48.0
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi 758 (932)
..+++...|++++.- .+.+.+.+.++|++|+++|+.++++||++...+..+.+++|+
T Consensus 416 ~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 416 KKIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eeEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 357777889988742 223556789999999999999999999999999999999986
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00055 Score=72.27 Aligned_cols=54 Identities=22% Similarity=0.358 Sum_probs=43.9
Q ss_pred EEEEECCEEEEEEEeccc-ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 702 VYVGVDNMLAGLIYVEDR-IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~D~-lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
++...||+++. .|. ..+.++++|++|+++|++++++||++...+..+.+++|++
T Consensus 2 i~~DlDGTLL~----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLD----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcC----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34556777663 233 4455999999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02957 copper, zinc superoxide dismutase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00041 Score=73.99 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=58.6
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.+++.+.+ +|+|++|+..|++.|++++||..+.+|+..+++.|.++. .. +.+.+++++.||.+.+...
T Consensus 5 ~~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~---~~--------~~I~~aIe~~Gy~a~~~~~ 72 (238)
T PLN02957 5 ELLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSS---PV--------KAMTAALEQTGRKARLIGQ 72 (238)
T ss_pred cEEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCcEEEecC
Confidence 45677888 799999999999999999999999999999999999842 22 6788999999999876654
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00064 Score=71.84 Aligned_cols=112 Identities=17% Similarity=0.210 Sum_probs=77.7
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cChhhHHHHHHHHhh---CCCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEKKRFINELQN---DENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~K~~~v~~l~~---~g~~v~ 787 (932)
-++.|++.++++.|+++|+++.++|+........+.+.+|+.. +.+++. -.|+-. -+.+.+++ ..+.++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 4678999999999999999999999999999999999999853 122221 122211 22233333 346799
Q ss_pred EEcCCcccHHHHHhCCeeEEe-cC---chHHHHhhcCEEEeCCChhHHH
Q 002354 788 MVGDGINDAAALASSHIGVAM-GG---GVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgIa~-~~---~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
||||..||+.+-+.|++.... .. ..+.-...+|+++. ++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 999999999999999987544 22 22222345777663 555543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0015 Score=71.37 Aligned_cols=114 Identities=19% Similarity=0.185 Sum_probs=81.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-ccChhhHHHHHH----HHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GVKPNEKKRFIN----ELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~~~p~~K~~~v~----~l~~~g~~v~~vGD 791 (932)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+... .+.+ ...+ .|.+.+. .+.-....++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5679999999999999999999999999999999999998632 1221 1111 1333333 23223467999999
Q ss_pred CcccHHHHHhCCeeEE-e--cCchH--HHHhhcCEEEeCCChhHHHHHH
Q 002354 792 GINDAAALASSHIGVA-M--GGGVG--AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 792 g~ND~~al~~A~vgIa-~--~~~~~--~a~~~ad~vl~~~~~~~i~~~i 835 (932)
+.+|+.+-+.|++-.. + |.... .....+|+++ +++..+..++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 9999999999998643 2 32222 2334689887 5777777654
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0011 Score=63.79 Aligned_cols=105 Identities=17% Similarity=0.242 Sum_probs=74.7
Q ss_pred EEEEEECCEEEEEEEe-----cccccHHHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCCceec-c
Q 002354 701 LVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNSAEYVASLVGIPKDKVLS-G 766 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l-----~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~v~~-~ 766 (932)
.+.+..|+++..-... +-++.+++.++++.|++.|++++++|+.. ......+.+.+|+....++. .
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 81 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP 81 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4566777877742111 23677999999999999999999999988 77888899999986332221 1
Q ss_pred --cCh--hhHHHHHHHHh-hCCCEEEEEcC-CcccHHHHHhCCee
Q 002354 767 --VKP--NEKKRFINELQ-NDENVVAMVGD-GINDAAALASSHIG 805 (932)
Q Consensus 767 --~~p--~~K~~~v~~l~-~~g~~v~~vGD-g~ND~~al~~A~vg 805 (932)
..| +-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 123 21134444442 44578999999 59999999998874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0013 Score=69.27 Aligned_cols=115 Identities=23% Similarity=0.243 Sum_probs=80.7
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC----CCceeccc-----Ch--hhHHHHHHHHhhC-CCE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP----KDKVLSGV-----KP--NEKKRFINELQND-ENV 785 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~----~~~v~~~~-----~p--~~K~~~v~~l~~~-g~~ 785 (932)
.++.+|+.+.++.|+++|+++.++|+.....+..+.+.+|+. .+.+++.- .| +-=...++.+.-. ...
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 478999999999999999999999999999999999999986 23343321 23 2112333333333 367
Q ss_pred EEEEcCCcccHHHHHhCCeeE--EecCc--h-HH-HHhhcCEEEeCCChhHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGV--AMGGG--V-GA-ASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgI--a~~~~--~-~~-a~~~ad~vl~~~~~~~i~~~ 834 (932)
++||||+.+|+.+-+.|++.. ++..+ . +. ....+|+++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999986 33222 1 22 233577776 356665544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00077 Score=70.16 Aligned_cols=53 Identities=11% Similarity=0.288 Sum_probs=44.5
Q ss_pred EEEEECCEEEEEEEec-ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002354 702 VYVGVDNMLAGLIYVE-DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 757 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~-D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g 757 (932)
+++..|++++. =. -++.+++.++|++|++.|++++++||+....+..+.+.++
T Consensus 2 i~~D~DgTL~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLD---PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcC---CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 45667888774 11 2588999999999999999999999999999999998865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0013 Score=69.90 Aligned_cols=115 Identities=14% Similarity=0.101 Sum_probs=82.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.. +.+.+ . -.|+-=..+++.+.-....++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 568999999999999999999999999998888889999853 12222 1 12222244555555556789999
Q ss_pred cCCcccHHHHHhCCeeE-EecCc----h-HHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGV-AMGGG----V-GAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI-a~~~~----~-~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.||+.+-+.|++.. ++..| . ......+|+++ +++..+.+.+
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 99999999999999874 33221 1 12234688888 4666665543
|
|
| >KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00073 Score=67.39 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=57.1
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
..++|.|+ |+|.+|+..|++.|+.++||.+++|++..+.+.|.-... + .++.++|+..|-++.++..
T Consensus 7 ~~~efaV~-M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p---~--------s~i~~~le~tGr~Avl~G~ 73 (247)
T KOG4656|consen 7 YEAEFAVQ-MTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVP---P--------SEIQNTLENTGRDAVLRGA 73 (247)
T ss_pred eeEEEEEe-chhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCC---h--------HHHHHHHHhhChheEEecC
Confidence 45677765 999999999999999999999999999999999974322 2 6899999999998887655
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=68.25 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=70.9
Q ss_pred cccHHHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-Cceec--------------ccChhhHHHHHHHH-hh
Q 002354 719 RIRDDAAHVVN-SLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-DKVLS--------------GVKPNEKKRFINEL-QN 781 (932)
Q Consensus 719 ~lr~~~~~~i~-~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~v~~--------------~~~p~~K~~~v~~l-~~ 781 (932)
.+.|++.+.|+ .++++|++++++|+-....++.+++..++.. +++.+ .+.-++|...++.. ..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCC
Confidence 46899999995 8899999999999999999999999855411 12221 14457888877654 32
Q ss_pred CCCEEEEEcCCcccHHHHHhCCeeEEec
Q 002354 782 DENVVAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 782 ~g~~v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
......+-||+.||.|||+.||..+++.
T Consensus 174 ~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 3345568899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0015 Score=81.27 Aligned_cols=137 Identities=18% Similarity=0.182 Sum_probs=94.3
Q ss_pred HHhCCCeEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCC----------
Q 002354 694 EDLMNQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGIPK---------- 760 (932)
Q Consensus 694 ~~~~g~~~~~va~~~~~lG~i~l--~D~lr~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~---------- 760 (932)
+.....+++++.+||+++....- ...+.+++.+++++|.+ .|+.|+++||++..........+++.-
T Consensus 487 y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~ 566 (726)
T PRK14501 487 YRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRA 566 (726)
T ss_pred HHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeC
Confidence 44456789999999999864211 12467899999999999 599999999999999988776565410
Q ss_pred -----------C------------------------------ceec-ccC------------------------------
Q 002354 761 -----------D------------------------------KVLS-GVK------------------------------ 768 (932)
Q Consensus 761 -----------~------------------------------~v~~-~~~------------------------------ 768 (932)
+ .++. +..
T Consensus 567 ~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~ 646 (726)
T PRK14501 567 PGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGN 646 (726)
T ss_pred CCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 0 0000 011
Q ss_pred ------h--hhHHHHHHHHhhC--CCEEEEEcCCcccHHHHHhC---CeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 769 ------P--NEKKRFINELQND--ENVVAMVGDGINDAAALASS---HIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 769 ------p--~~K~~~v~~l~~~--g~~v~~vGDg~ND~~al~~A---~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
| -+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++ +..|++++.+ -+.|..++
T Consensus 647 ~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 647 KVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPS--QREVRELL 720 (726)
T ss_pred eEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCC--HHHHHHHH
Confidence 1 1344444444331 24799999999999999986 688999874 5678888864 35566665
Q ss_pred H
Q 002354 836 E 836 (932)
Q Consensus 836 ~ 836 (932)
+
T Consensus 721 ~ 721 (726)
T PRK14501 721 R 721 (726)
T ss_pred H
Confidence 4
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0028 Score=71.65 Aligned_cols=77 Identities=12% Similarity=0.238 Sum_probs=52.9
Q ss_pred HHHhhcCCCCchhhhHHHHHhCCCeEEEEEECCEEEEEEEecc--cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002354 676 DWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 753 (932)
Q Consensus 676 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia 753 (932)
.|+.++-.....++....+......++++.+||++.-+..--| .+.++.++++++|.+. ..|.|+||+......++.
T Consensus 96 ~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l 174 (384)
T PLN02580 96 TWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELV 174 (384)
T ss_pred HHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHh
Confidence 4555543323334444445555678889999999987552111 3478999999999988 489999999877765554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0022 Score=67.29 Aligned_cols=93 Identities=12% Similarity=0.007 Sum_probs=72.9
Q ss_pred cccHHHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-Cceec--------------ccChhhHHHHHHHH-hh
Q 002354 719 RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-DKVLS--------------GVKPNEKKRFINEL-QN 781 (932)
Q Consensus 719 ~lr~~~~~~i-~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~v~~--------------~~~p~~K~~~v~~l-~~ 781 (932)
.+.|++.+.| +.+++.|++++++|+-...-++.+++.+|+.. +++.| .+.-++|...++.. ..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence 4589999999 67899999999999999999999999999510 12221 24568898877754 33
Q ss_pred CCCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 782 DENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 782 ~g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
......+-||..||.|||+.|+..++++..
T Consensus 175 ~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 175 PLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 444556889999999999999999999643
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0012 Score=66.95 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=77.0
Q ss_pred CCeEEEEEECCEEEEEEEecc----cccHHHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCCcee-
Q 002354 698 NQSLVYVGVDNMLAGLIYVED----RIRDDAAHVVNSLSSQGIGVYMLSGDKKN--------SAEYVASLVGIPKDKVL- 764 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D----~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~v~- 764 (932)
+++.+++..|+++.|-..+.+ ++-|++++++++|++.|+++.++|..+.. ......+..|++ .++
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~ 80 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYL 80 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEE
Confidence 678889999999877633332 36899999999999999999999987631 234445677876 333
Q ss_pred cc---------cCh--hhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 765 SG---------VKP--NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 765 ~~---------~~p--~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
+. ..| +-=..+++.+....+.++||||..+|+.+-+.|++-...
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 11 122 222444444544456899999999999999999987443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0013 Score=70.02 Aligned_cols=83 Identities=22% Similarity=0.359 Sum_probs=63.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCCCC----ceecccCh--hhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK----KNSAEYVASLVGIPKD----KVLSGVKP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~----~v~~~~~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
.+.+++++.++.|+++|+++.++|++. ..++..+.+.+|++.+ .++..-+. .+|.. .+++.+ .++|
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~-i~I~ 189 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN-IRIF 189 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcC-CeEE
Confidence 467889999999999999999999974 6689999999999422 33333222 34554 344444 4899
Q ss_pred EcCCcccHHHHHhCCee
Q 002354 789 VGDGINDAAALASSHIG 805 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg 805 (932)
+||..+|..+-+.|++-
T Consensus 190 IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 190 YGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCHHHHHHHHHcCCc
Confidence 99999999999999885
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.003 Score=68.88 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=63.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceecc-c----Ch--hhHHHHHHHHhhC-CCEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KP--NEKKRFINELQND-ENVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~~-~----~p--~~K~~~v~~l~~~-g~~v~ 787 (932)
.+-|++.++++.|++.|+++.++|+.....+..+-+.+|+.. +.+++. - .| +-=....+.+.-. ...++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l 180 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACV 180 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceE
Confidence 467899999999999999999999999998888888776532 233322 1 12 1112333333322 35799
Q ss_pred EEcCCcccHHHHHhCCee
Q 002354 788 MVGDGINDAAALASSHIG 805 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg 805 (932)
||||..+|+.+-+.|++-
T Consensus 181 ~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 181 KVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred EEcCcHHHHHHHHHCCCE
Confidence 999999999999999973
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0025 Score=68.76 Aligned_cols=87 Identities=17% Similarity=0.134 Sum_probs=65.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceecc-c----Ch--hhHHHHHHHHhhC-CCEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KP--NEKKRFINELQND-ENVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~~-~----~p--~~K~~~v~~l~~~-g~~v~ 787 (932)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. +.+++. - .| +-=....+.+.-. .+.++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l 178 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACV 178 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheE
Confidence 457899999999999999999999999999999999888753 223332 1 22 2223333334322 45699
Q ss_pred EEcCCcccHHHHHhCCee
Q 002354 788 MVGDGINDAAALASSHIG 805 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg 805 (932)
||||..+|+.+-+.|++-
T Consensus 179 ~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 179 KVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred EECCcHHHHHHHHHCCCe
Confidence 999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0015 Score=69.59 Aligned_cols=82 Identities=18% Similarity=0.294 Sum_probs=62.1
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCC--CceecccC-h---hhHHHHHHHHhhCCCEEEEE
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIPK--DKVLSGVK-P---NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~--~~v~~~~~-p---~~K~~~v~~l~~~g~~v~~v 789 (932)
+.+.+.+.++.|+++|+++.++|+. ...++..+.+.+|++. +.++..-. . .+|. ..+++.+ .++|+
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~-i~i~v 190 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKN-IRIHY 190 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCC-CeEEE
Confidence 3445999999999999999999998 7779999999999974 23333221 0 1233 3445554 47999
Q ss_pred cCCcccHHHHHhCCee
Q 002354 790 GDGINDAAALASSHIG 805 (932)
Q Consensus 790 GDg~ND~~al~~A~vg 805 (932)
||..||..+-+.|++-
T Consensus 191 GDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 191 GDSDNDITAAKEAGAR 206 (237)
T ss_pred eCCHHHHHHHHHCCCC
Confidence 9999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0016 Score=67.39 Aligned_cols=86 Identities=17% Similarity=0.199 Sum_probs=65.0
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee------cccChhhHHHHHHHHhhCCCEEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL------SGVKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~------~~~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
.+++.+.+.++++.|++.|+++.++|+.+...+..+.+.+|+.. +.++ ..-.|+--...++.+.-....++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 34466677999999999999999999999999999999999862 1111 122344334555666555678999
Q ss_pred EcCCcccHHHHHhC
Q 002354 789 VGDGINDAAALASS 802 (932)
Q Consensus 789 vGDg~ND~~al~~A 802 (932)
|||+.+|+.+-+.|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0019 Score=69.53 Aligned_cols=66 Identities=21% Similarity=0.262 Sum_probs=43.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHH-----HHhh---cC-EEEeCCChhHHHHHHH
Q 002354 771 EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGA-----ASEV---AS-VVLMGNRLSQLLVALE 836 (932)
Q Consensus 771 ~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~-----a~~~---ad-~vl~~~~~~~i~~~i~ 836 (932)
.|...++.|+++ ...|+++||+.||.+||..++-||.++|+.+. .... .. ++-..+.-.+|.+.++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 466666655543 24588899999999999999999999998888 2222 22 3344566778887765
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0037 Score=63.65 Aligned_cols=118 Identities=20% Similarity=0.332 Sum_probs=90.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 761 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 761 (932)
++-|++.++++.|++. ...+++|-.-.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4578999999999876 55666666777888999999998531
Q ss_pred -----ceecccChhhHHHHHHHHhhC------------------CCEEEEEcCCcccHHHHHhCC-ee-EEec-CchHHH
Q 002354 762 -----KVLSGVKPNEKKRFINELQND------------------ENVVAMVGDGINDAAALASSH-IG-VAMG-GGVGAA 815 (932)
Q Consensus 762 -----~v~~~~~p~~K~~~v~~l~~~------------------g~~v~~vGDg~ND~~al~~A~-vg-Ia~~-~~~~~a 815 (932)
.+|.++.|.+-.+++...+.- ....++|||.+.|..||+.+. -| +|+. ||.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 456677776544444443322 234789999999999999873 33 6666 888899
Q ss_pred HhhcCEEEeCCChhHHHHHHHH
Q 002354 816 SEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 816 ~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
...||+.+.+.+...+..+|++
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 9999999999999999888886
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0041 Score=67.48 Aligned_cols=111 Identities=19% Similarity=0.200 Sum_probs=78.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|+++|+++.++|+.+...+..+-+.+|+.. +.+++. -.|+-=...++.+.-....++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 468999999999999999999999999999999999999853 223221 12222234444444455679999
Q ss_pred cCCcccHHHHHhCCeeE-Ee-cCchHHHHhhcCEEEeCCChhHH
Q 002354 790 GDGINDAAALASSHIGV-AM-GGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI-a~-~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
||..+|+.+-+.|++-. ++ |.........+|+++. ++..+
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 99999999999999853 33 2222323345787764 45544
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0039 Score=63.46 Aligned_cols=130 Identities=18% Similarity=0.203 Sum_probs=79.0
Q ss_pred eEEEEEECCEEEEEEEe-----cccccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l-----~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~ 759 (932)
..+++..||+++---.. +-++.|++.++|++|+++|+++.++|.-+. .....+.++.|+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD 81 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 35677788887621010 113468999999999999999999997653 2223445556654
Q ss_pred CCceec-c---------------cChh--hHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee--EEecCchH---HHH
Q 002354 760 KDKVLS-G---------------VKPN--EKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAMGGGVG---AAS 816 (932)
Q Consensus 760 ~~~v~~-~---------------~~p~--~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg--Ia~~~~~~---~a~ 816 (932)
.+.++. . ..|+ -=....+.+.-....++||||..+|+.+-+.|++. |.+..+.. ...
T Consensus 82 ~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~ 161 (176)
T TIGR00213 82 LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAE 161 (176)
T ss_pred ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCccccccc
Confidence 333321 1 1222 11223333333456799999999999999999985 34433321 122
Q ss_pred hhcCEEEeCCChhHH
Q 002354 817 EVASVVLMGNRLSQL 831 (932)
Q Consensus 817 ~~ad~vl~~~~~~~i 831 (932)
..+|+++. ++..+
T Consensus 162 ~~ad~~i~--~~~el 174 (176)
T TIGR00213 162 NIADWVLN--SLADL 174 (176)
T ss_pred ccCCEEec--cHHHh
Confidence 34888884 45444
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.005 Score=66.34 Aligned_cols=106 Identities=11% Similarity=0.204 Sum_probs=76.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cce-eccc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSGV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v-~~~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|+++|+++.++|+-+...+..+.+.+|+.. +.+ .+.. .|+--....+.+.-....++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 467899999999999999999999999999999999999863 222 2221 2222244455555456779999
Q ss_pred cCCcccHHHHHhCCeeEE-ecCc--hH-HHHhhcCEEEe
Q 002354 790 GDGINDAAALASSHIGVA-MGGG--VG-AASEVASVVLM 824 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa-~~~~--~~-~a~~~ad~vl~ 824 (932)
||..+|+.+-++|++-.. +..+ .+ .....+|+++.
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 999999999999998633 3222 12 22346888875
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0079 Score=61.45 Aligned_cols=116 Identities=22% Similarity=0.211 Sum_probs=73.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCceec-c---------cC--hhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVLS-G---------VK--PNE 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~v~~-~---------~~--p~~ 771 (932)
.+.|++.+++++|++.|+++.++|..+. .....+-+..|+..+.++. . .. |+-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 4578999999999999999999998752 2223344566764334332 1 12 222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeE-EecCch--H-HHHhhc--CEEEeCCChhHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV-AMGGGV--G-AASEVA--SVVLMGNRLSQLLVALE 836 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgI-a~~~~~--~-~a~~~a--d~vl~~~~~~~i~~~i~ 836 (932)
-....+.+.-..+.++||||..+|+.+-+.|++.. .+..+. . .....+ |+++ +++..+.+++.
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 23444445445678999999999999999999752 232322 1 112235 7776 46666665543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0084 Score=59.82 Aligned_cols=89 Identities=19% Similarity=0.289 Sum_probs=65.9
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----cCCCCCceec--------------ccChhh-HH
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASL-----VGIPKDKVLS--------------GVKPNE-KK 773 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~---~ia~~-----~gi~~~~v~~--------------~~~p~~-K~ 773 (932)
+|.+.+++.+++++++++|++++++||++...+. ...++ .+++...++. .-.|+. |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3788999999999999999999999999999884 55556 2354211111 123433 77
Q ss_pred HHHHHHhh-----CCCEEEEEcCCcccHHHHHhCCee
Q 002354 774 RFINELQN-----DENVVAMVGDGINDAAALASSHIG 805 (932)
Q Consensus 774 ~~v~~l~~-----~g~~v~~vGDg~ND~~al~~A~vg 805 (932)
+.++.+++ ....++.+||+.+|+.+-+++++-
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 78887776 345677799999999999988763
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0057 Score=61.91 Aligned_cols=106 Identities=22% Similarity=0.229 Sum_probs=77.2
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCceecccChhhH--
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSGVKPNEK-- 772 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~v~~~~~p~~K-- 772 (932)
..+.+.+.+..|+++.-. =...+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+. .......|...
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~~~ 97 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGCAF 97 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChHHH
Confidence 457778888888776521 133678999999999999999999999988 67788888999985 22222344322
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-ccHHHHHhCCee
Q 002354 773 KRFINELQNDENVVAMVGDGI-NDAAALASSHIG 805 (932)
Q Consensus 773 ~~~v~~l~~~g~~v~~vGDg~-ND~~al~~A~vg 805 (932)
..+.+.+.-....++||||.. .|..+-+.|++-
T Consensus 98 ~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 98 RRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred HHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 223333333456799999998 799999999985
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0033 Score=69.70 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=71.9
Q ss_pred ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec--------------ccChhhHHHHHHH
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS--------------GVKPNEKKRFINE 778 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~--------------~~~p~~K~~~v~~ 778 (932)
..+++.+++.++++.|++.|++++++||++...+..+.+.+|+.. +.+.+ +-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 578899999999999999999999999999999999999988863 11111 2233445556655
Q ss_pred Hhh-CCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 779 LQN-DENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 779 l~~-~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+-. ....++||||..+|+.+-+.|++-.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 433 3478999999999999999999874
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0033 Score=62.17 Aligned_cols=89 Identities=18% Similarity=0.155 Sum_probs=71.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCCCceecc------------------cChhhHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IPKDKVLSG------------------VKPNEKKRFI 776 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~v~~~------------------~~p~~K~~~v 776 (932)
.++|+-++.++.+++++++++++|+....-...+-++++ |...+++++ .--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 579999999999999999999999998888888888877 321111111 1225799999
Q ss_pred HHHhhCCCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 777 NELQNDENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 777 ~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
+.|++..+.+.|+|||+.|.+|-+.+|+=.|
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 9999999999999999999988887776544
|
|
| >KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0034 Score=53.97 Aligned_cols=56 Identities=29% Similarity=0.385 Sum_probs=47.2
Q ss_pred EEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcC
Q 002354 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCG 196 (932)
Q Consensus 130 l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~G 196 (932)
...-.|+|.+|+..|++.+..++||.+++++...++++|.-+ .++ ..+.+.+++.|
T Consensus 8 v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p--------~~vl~~l~k~~ 63 (73)
T KOG1603|consen 8 VLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDP--------VKLLKKLKKTG 63 (73)
T ss_pred EEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCH--------HHHHHHHHhcC
Confidence 344589999999999999999999999999999999999865 333 66777777655
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0081 Score=70.84 Aligned_cols=118 Identities=15% Similarity=0.218 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc--cChhhHHHHHHH-Hhh-CCCEEEEEcCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG--VKPNEKKRFINE-LQN-DENVVAMVGDG 792 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~--~~p~~K~~~v~~-l~~-~g~~v~~vGDg 792 (932)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. ..+..|.+++.. +++ ....++||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 578999999999999999999999999999999999999853 122221 111112223322 221 24679999999
Q ss_pred cccHHHHHhCCee-EEecC--chHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 793 INDAAALASSHIG-VAMGG--GVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 793 ~ND~~al~~A~vg-Ia~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
.+|+.+-+.|++- |++.. ..+.....+|+++ +++..+..++...
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 9999999999984 44432 2222234588887 4777777665443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0046 Score=66.47 Aligned_cols=54 Identities=13% Similarity=0.219 Sum_probs=38.7
Q ss_pred CeEEEEEECCEEEEEEE--ecccccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHH
Q 002354 699 QSLVYVGVDNMLAGLIY--VEDRIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYV 752 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~--l~D~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~i 752 (932)
.+.+++.+||+++-+.. -...+.++..+++++|.+. +..|+++||++.......
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~ 59 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLG 59 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhcccc
Confidence 46778889999886321 1223568999999999776 456889999987665443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0081 Score=60.82 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=70.7
Q ss_pred EEEEecccccHHHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------C--CceecccCh-hhH--HHHH
Q 002354 712 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVGIP---------K--DKVLSGVKP-NEK--KRFI 776 (932)
Q Consensus 712 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~---------~--~~v~~~~~p-~~K--~~~v 776 (932)
....-+-++.|++.++++.|+++|+++.++|+. ....+..+.+.+|+. . +.+.+.-.+ ..| ..+.
T Consensus 38 ~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~ 117 (174)
T TIGR01685 38 DKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMIL 117 (174)
T ss_pred eCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHH
Confidence 333444567899999999999999999999976 888999999999985 2 233322222 222 2344
Q ss_pred HHHhhC------CCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 777 NELQND------ENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 777 ~~l~~~------g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
+.+.+. ...++||||...|+.+-++|++-...
T Consensus 118 ~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 118 QKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred HHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 544432 36799999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.011 Score=62.16 Aligned_cols=106 Identities=15% Similarity=0.110 Sum_probs=73.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-ceecc-----cCh--hhHHHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-KVLSG-----VKP--NEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~vG 790 (932)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+... .+.+. ..| +-=....+.+.-....++|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 5689999999999999999999999887777777777887421 22221 122 212233334444457899999
Q ss_pred CCcccHHHHHhCCee-EEecCch-HHHHhhcCEEEe
Q 002354 791 DGINDAAALASSHIG-VAMGGGV-GAASEVASVVLM 824 (932)
Q Consensus 791 Dg~ND~~al~~A~vg-Ia~~~~~-~~a~~~ad~vl~ 824 (932)
|..+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 163 Ds~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 999999999999985 5664332 222345777764
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.012 Score=57.73 Aligned_cols=108 Identities=21% Similarity=0.277 Sum_probs=84.9
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhH-
Q 002354 694 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK- 772 (932)
Q Consensus 694 ~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K- 772 (932)
....|.+.+.+..|++++.. =..+..|+.++=++.++++|+++.++|-.++..+..+++.+|++ -++-...|-.+
T Consensus 23 L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~~ 98 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGRA 98 (175)
T ss_pred HHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHHH
Confidence 44578889999999999875 34577899999999999999999999999999999999999997 56555666554
Q ss_pred -HHHHHHHhhCCCEEEEEcCC-cccHHHHHhCCee
Q 002354 773 -KRFINELQNDENVVAMVGDG-INDAAALASSHIG 805 (932)
Q Consensus 773 -~~~v~~l~~~g~~v~~vGDg-~ND~~al~~A~vg 805 (932)
.+.+++++-..+.|+||||. ..|+-+=..+++-
T Consensus 99 fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 99 FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 23444444456789999998 5777666666554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0083 Score=62.07 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=66.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c----cChhhH--HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPNEK--KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~----~~p~~K--~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+++++|+++|+++.++|+-+......+.+.+|+.. +.+++ . ..|+-. ..+.+.+.-....++||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 467999999999999999999999999999999999999842 22332 1 233211 33344444455789999
Q ss_pred cCCcccHHHHHhCCeeE
Q 002354 790 GDGINDAAALASSHIGV 806 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI 806 (932)
||+.+|+.+-+.+++-.
T Consensus 172 gD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFKT 188 (198)
T ss_pred eCCHHHHHHHHHCCCcE
Confidence 99999999999998753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0097 Score=62.59 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=67.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cChhh--HHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNE--KKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~--K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|+++|++++++|+-+...+....+.+|+.. +.+++. ..|.. =....+.+.-....++||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 578999999999999999999999998888888899999852 123221 22321 123333343344679999
Q ss_pred cCCc-ccHHHHHhCCee-EEec
Q 002354 790 GDGI-NDAAALASSHIG-VAMG 809 (932)
Q Consensus 790 GDg~-ND~~al~~A~vg-Ia~~ 809 (932)
||.. +|+.+-+.|++- |.+.
T Consensus 174 gDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEEC
Confidence 9998 999999999984 4454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0067 Score=60.57 Aligned_cols=89 Identities=21% Similarity=0.338 Sum_probs=69.9
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CCceecc-----cCh--hhHHHHHHHHhhCCCEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG-----VKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
..++.+++.+.++.|++.|++++++|+.+........+++|+. .+.+++. ..| +-=..+++.+.-....++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4467899999999999999999999999999999999999986 3344322 122 222445555555667899
Q ss_pred EEcCCcccHHHHHhCCee
Q 002354 788 MVGDGINDAAALASSHIG 805 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg 805 (932)
+|||..+|+.+-+.|++-
T Consensus 155 ~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEESSHHHHHHHHHTTSE
T ss_pred EEeCCHHHHHHHHHcCCe
Confidence 999999999999999875
|
... |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.033 Score=62.66 Aligned_cols=59 Identities=12% Similarity=0.169 Sum_probs=48.1
Q ss_pred HhCCCeEEEEEECCEEEEEEEecc--cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002354 695 DLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 754 (932)
Q Consensus 695 ~~~g~~~~~va~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~ 754 (932)
......++++.+||+|+-+..-.| .+.++..++|++|. .|+.++++||+.......+..
T Consensus 107 ~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 344567788889999997765434 48899999999999 789999999999999887743
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.021 Score=64.70 Aligned_cols=111 Identities=19% Similarity=0.211 Sum_probs=79.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|+++|+++.++|+.+...+..+-+.+||.. +.+++. -.| +-=...++.+.-....++||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 367999999999999999999999999999999999999853 223221 122 22234455555556789999
Q ss_pred cCCcccHHHHHhCCeeE-EecCchHHH-HhhcCEEEeCCChhHH
Q 002354 790 GDGINDAAALASSHIGV-AMGGGVGAA-SEVASVVLMGNRLSQL 831 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI-a~~~~~~~a-~~~ad~vl~~~~~~~i 831 (932)
||..+|+.|-+.|++-. ++.++.+.. ...+|+++ +++..+
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 99999999999999863 333332222 23478776 355554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.009 Score=58.86 Aligned_cols=87 Identities=18% Similarity=0.282 Sum_probs=61.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCc-eecc---------cChhhH-
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDK-VLSG---------VKPNEK- 772 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~-v~~~---------~~p~~K- 772 (932)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.... ++.. ..|+-+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999998662 4566778889986321 2221 123211
Q ss_pred -HHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee
Q 002354 773 -KRFINELQNDENVVAMVGDGINDAAALASSHIG 805 (932)
Q Consensus 773 -~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg 805 (932)
..+++.+.-..+.++||||...|+.+-+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 223333333456799999999999999998875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0098 Score=63.03 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=67.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c----cChh--hHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPN--EKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~----~~p~--~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|+++|+++.++|..+...+...-+.+|+.. +.+++ . -.|+ -=....+.+.-....++||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 568999999999999999999999988888888888899852 22322 2 1221 1122233333345679999
Q ss_pred cCCcccHHHHHhCCee--EEecCc
Q 002354 790 GDGINDAAALASSHIG--VAMGGG 811 (932)
Q Consensus 790 GDg~ND~~al~~A~vg--Ia~~~~ 811 (932)
||..+|+.+-+.|++. +++.++
T Consensus 173 gDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 173 DDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred cCCHHHHHHHHHcCCeEEEEEeCC
Confidence 9999999999999996 445443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.016 Score=58.29 Aligned_cols=107 Identities=11% Similarity=0.116 Sum_probs=70.1
Q ss_pred CeEEEEEECCEEEEEEE------eccc---ccHHHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcC
Q 002354 699 QSLVYVGVDNMLAGLIY------VEDR---IRDDAAHVVNSLSSQGIGVYMLSGDKKN------------SAEYVASLVG 757 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~------l~D~---lr~~~~~~i~~L~~~Gi~v~~~TGd~~~------------~a~~ia~~~g 757 (932)
.+.+++..|++++-... -.++ +-|++.+++++|+++|+++.++|..+.. .+..+.+.+|
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~g 92 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLK 92 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcC
Confidence 35677788998874321 1122 3489999999999999999999965542 4567889999
Q ss_pred CCCCceeccc-----Chh--hHHHHHHHHh--hCCCEEEEEcCCc--------ccHHHHHhCCee
Q 002354 758 IPKDKVLSGV-----KPN--EKKRFINELQ--NDENVVAMVGDGI--------NDAAALASSHIG 805 (932)
Q Consensus 758 i~~~~v~~~~-----~p~--~K~~~v~~l~--~~g~~v~~vGDg~--------ND~~al~~A~vg 805 (932)
+....+.+.- .|. -=..+.+.+. -....++||||.. +|+.+-+.|++-
T Consensus 93 l~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 93 VPIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 8642232211 221 1122333333 2336799999986 699998888764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.016 Score=63.79 Aligned_cols=106 Identities=14% Similarity=0.145 Sum_probs=71.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCC-cee-cc----cCh--hhHHHHHHHHhhCCCEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKD-KVL-SG----VKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi---~~~-~v~-~~----~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
++.|++.+.++.|++.|+++.++|+-+......+-+..+. ... .++ +. -.| +-=..+.+.+.-....++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999988888777666532 110 122 11 122 112334444444556799
Q ss_pred EEcCCcccHHHHHhCCeeEEec-Cc--hHHHHhhcCEEEe
Q 002354 788 MVGDGINDAAALASSHIGVAMG-GG--VGAASEVASVVLM 824 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgIa~~-~~--~~~a~~~ad~vl~ 824 (932)
||||+.+|+.+-+.|++....- .+ .......+|+++.
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 9999999999999999875442 22 2222245888874
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.017 Score=60.70 Aligned_cols=113 Identities=13% Similarity=0.244 Sum_probs=77.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-c----ChhhH--HHHHHHH-hhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-V----KPNEK--KRFINEL-QNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p~~K--~~~v~~l-~~~g~~v~~ 788 (932)
++.|++.+.+++|++. ++++++|+-....+..+.+.+|+.. +.+++. . .|+.. ...++.+ .-....++|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 5689999999999999 9999999999999999999999852 234332 1 23221 3334444 334467999
Q ss_pred EcCCc-ccHHHHHhCCee-EEec--CchHHHHhhcCEEEeCCChhHHHHH
Q 002354 789 VGDGI-NDAAALASSHIG-VAMG--GGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vg-Ia~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
|||.. +|+.+-+.+++- |.+. ...+.....++.++ +++..+..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 899999999973 3432 22222223466666 456666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0079 Score=61.27 Aligned_cols=85 Identities=15% Similarity=0.166 Sum_probs=59.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-----ccCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-----~~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|+++|+++.++|+... +..+.+.+|+.. +.++. .-.| +-=....+.+.-....++||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 5789999999999999999999997533 456788899852 22221 1122 21123333333334579999
Q ss_pred cCCcccHHHHHhCCee
Q 002354 790 GDGINDAAALASSHIG 805 (932)
Q Consensus 790 GDg~ND~~al~~A~vg 805 (932)
||..+|+.+-+.|++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999885
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.019 Score=62.09 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=63.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCC---CceecccChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKN---SAEYVASLVGIPK---DKVLSGVKPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~---~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
.++-|++.+.++.|++.|+++.++|++... ......+..|++. +.++.+-....|....+.+.+.-..+++|||
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD 196 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFGD 196 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEECC
Confidence 456799999999999999999999998744 3446667899963 3555554334576667777665567999999
Q ss_pred CcccHHHHHh
Q 002354 792 GINDAAALAS 801 (932)
Q Consensus 792 g~ND~~al~~ 801 (932)
..+|......
T Consensus 197 ~~~Df~~~~~ 206 (266)
T TIGR01533 197 NLLDFDDFFY 206 (266)
T ss_pred CHHHhhhhhc
Confidence 9999865433
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.065 Score=62.41 Aligned_cols=148 Identities=15% Similarity=0.269 Sum_probs=116.4
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---------------------------
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------- 761 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------- 761 (932)
.|.|++.+..+.+++....|+.|-++-|+.+-.|-.++...+-+|+++||...
T Consensus 816 If~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~ 895 (1354)
T KOG4383|consen 816 IFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAA 895 (1354)
T ss_pred hhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhc
Confidence 58999999999999999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------ceeccc
Q 002354 762 --------------------------------------------------------------------------KVLSGV 767 (932)
Q Consensus 762 --------------------------------------------------------------------------~v~~~~ 767 (932)
-.|...
T Consensus 896 qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDc 975 (1354)
T KOG4383|consen 896 QKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDC 975 (1354)
T ss_pred cCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCC
Confidence 256778
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcccHH--HHHhCCeeEEecC-------------chHH--HHh-------------
Q 002354 768 KPNEKKRFINELQNDENVVAMVGDGINDAA--ALASSHIGVAMGG-------------GVGA--ASE------------- 817 (932)
Q Consensus 768 ~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~--al~~A~vgIa~~~-------------~~~~--a~~------------- 817 (932)
+|+...+.|+.+|+.|++++.+|.-.|-.. .+-+||++|++-. ++.. |+.
T Consensus 976 npeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqL 1055 (1354)
T KOG4383|consen 976 NPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQL 1055 (1354)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccc
Confidence 999999999999999999999999877544 3468899998732 1111 111
Q ss_pred ---hcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 818 ---VASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYN 856 (932)
Q Consensus 818 ---~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N 856 (932)
+.|+-+....+-.+..+|+-+|..+.-+|+.+.|.+-..
T Consensus 1056 naL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~q 1097 (1354)
T KOG4383|consen 1056 NALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQ 1097 (1354)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 123333333455678888889999999999888866443
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.011 Score=60.36 Aligned_cols=86 Identities=16% Similarity=0.231 Sum_probs=62.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cChhhH--HHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~~ 788 (932)
-++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+.. +.+++. ..|... ....+.+.-....++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 367999999999999999999999987 66788888899852 233221 223211 2223333333467999
Q ss_pred EcCCcccHHHHHhCCee
Q 002354 789 VGDGINDAAALASSHIG 805 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg 805 (932)
|||..+|+.+-+.|++.
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.03 Score=58.98 Aligned_cols=79 Identities=14% Similarity=0.192 Sum_probs=59.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCC-Cceeccc-Chhh------HHHHHHHHhhCCC-E
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIPK-DKVLSGV-KPNE------KKRFINELQNDEN-V 785 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~-~~v~~~~-~p~~------K~~~v~~l~~~g~-~ 785 (932)
-+.-|++.+.++.|++.|++|+++||+.... ...--++.|++. ++++-|- .... |.+.-+.+.++|+ +
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI 198 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI 198 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceE
Confidence 3667999999999999999999999999765 445556789874 4455443 1122 6677777777776 5
Q ss_pred EEEEcCCcccH
Q 002354 786 VAMVGDGINDA 796 (932)
Q Consensus 786 v~~vGDg~ND~ 796 (932)
++.+||..+|.
T Consensus 199 v~~iGDq~sDl 209 (229)
T TIGR01675 199 WGNIGDQWSDL 209 (229)
T ss_pred EEEECCChHHh
Confidence 67799999996
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.029 Score=53.89 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=58.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCC---CceecccChhhH--HHHHHHHh--hCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVG-------IPK---DKVLSGVKPNEK--KRFINELQ--NDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd-~~~~a~~ia~~~g-------i~~---~~v~~~~~p~~K--~~~v~~l~--~~g 783 (932)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+ +.. ..+.++-.|+-+ ...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 57999999999999999999999999 7877878778777 321 112222234322 23333444 345
Q ss_pred CEEEEEcCCcccHHHHHh
Q 002354 784 NVVAMVGDGINDAAALAS 801 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~ 801 (932)
..++||||...|...++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 789999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.026 Score=57.18 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=62.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-ccc----Ch--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV----KP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~----~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|++++++|+..... ..+..++|+.. +.++ +.. .| +--..+.+.+.-....++||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 578999999999999999999999988877 66666688842 2332 221 22 22233344444456789999
Q ss_pred cCCcccHHHHHhCCee
Q 002354 790 GDGINDAAALASSHIG 805 (932)
Q Consensus 790 GDg~ND~~al~~A~vg 805 (932)
||...|+.+-+.+++-
T Consensus 164 gD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 164 DDSPAGIEAAKAAGMH 179 (183)
T ss_pred cCCHHHHHHHHHcCCE
Confidence 9999999999998873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.016 Score=58.05 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCce-ec-----cc----ChhhHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKV-LS-----GV----KPNEKK 773 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~v-~~-----~~----~p~~K~ 773 (932)
++-|++.+++++|+++|++++++|-. ....+..+.+.+|+..+.+ ++ .. .|. .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~--~ 106 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPK--I 106 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCC--H
Confidence 35688999999999999999999964 2456778888999974334 33 11 222 2
Q ss_pred HHHHHH----hhCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 774 RFINEL----QNDENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 774 ~~v~~l----~~~g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
.++..+ ......+.||||+.+|+.+-+.+++-...
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 333322 22335699999999999999999987443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.024 Score=65.02 Aligned_cols=105 Identities=16% Similarity=0.182 Sum_probs=72.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS-LVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~-~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.. +.+++. -.| +-=...++.+.-..+.++|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 467999999999999999999999999888887765 678742 123221 122 2223444444445678999
Q ss_pred EcCCcccHHHHHhCCee-EEecCc--hHHHHhhcCEEE
Q 002354 789 VGDGINDAAALASSHIG-VAMGGG--VGAASEVASVVL 823 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~~--~~~a~~~ad~vl 823 (932)
|||..+|+.+-+.|++. |++..+ .+.....+|.++
T Consensus 173 VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 173 IEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred EeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 99999999999999987 344332 222334566665
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.02 Score=64.07 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=79.6
Q ss_pred eEEEEEECCEEEEEEEecc--------cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCceeccc
Q 002354 700 SLVYVGVDNMLAGLIYVED--------RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGV 767 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D--------~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~v~~~~ 767 (932)
.++.+..|+++-+-+.-+| ++.+++.++++.|+++|+.+.++|..+...+..+-+. +|+...-.....
T Consensus 4 k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~ 83 (320)
T TIGR01686 4 KVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSI 83 (320)
T ss_pred EEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEE
Confidence 3455566777665555555 4568999999999999999999999999999999999 888632111112
Q ss_pred ChhhHHHHHH----HHhhCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 002354 768 KPNEKKRFIN----ELQNDENVVAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 768 ~p~~K~~~v~----~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
.++-|.+.++ .+.-....++||||...|+.+.+.+...+.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2333444444 33334578999999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.043 Score=56.13 Aligned_cols=58 Identities=22% Similarity=0.323 Sum_probs=47.4
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
...+++...|+++++ =..+ ...+.+.+.+|+++|++|+.+|.-.......+-+.+|++
T Consensus 6 ~~~lIFtDlD~TLl~-~~ye---~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 6 MPLLIFTDLDGTLLP-HSYE---WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cceEEEEcccCcccC-CCCC---CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 345778888898887 3333 234778999999999999999999999999999999985
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.023 Score=56.05 Aligned_cols=83 Identities=20% Similarity=0.232 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CCceecc----cCh--hhHHHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG----VKP--NEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~v~~~----~~p--~~K~~~v~~l~~~g~~v~~vG 790 (932)
...+++.+.++.|++.|+++.++|+.....+....+.. +. .+.+++. -.| +-=..+.+.+.-.. .++|||
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~iG 141 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLHVG 141 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEEEe
Confidence 34478999999999999999999999999998888875 32 1223221 122 11122333333334 799999
Q ss_pred CCcccHHHHHhCC
Q 002354 791 DGINDAAALASSH 803 (932)
Q Consensus 791 Dg~ND~~al~~A~ 803 (932)
|..+|+.+-+.|+
T Consensus 142 Ds~~Di~aa~~aG 154 (154)
T TIGR01549 142 DNLNDIEGARNAG 154 (154)
T ss_pred CCHHHHHHHHHcc
Confidence 9999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.05 Score=57.39 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=75.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-ccc----Chhh--HHHHHHHHhhC-CCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV----KPNE--KKRFINELQND-ENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~----~p~~--K~~~v~~l~~~-g~~v~~ 788 (932)
++.|++.++++.|+ .|+++.++|......+...-+.+|+.. +.++ +.. .|.- =...++.+.-. ...++|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 46799999999999 689999999988888888888999842 2332 221 2321 12233333222 257999
Q ss_pred EcCCc-ccHHHHHhCCee-EEec-CchHH-HHhhcCEEEeCCChhHHHHHH
Q 002354 789 VGDGI-NDAAALASSHIG-VAMG-GGVGA-ASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vg-Ia~~-~~~~~-a~~~ad~vl~~~~~~~i~~~i 835 (932)
|||.. +|+.+-+.|++- |.+. .+... ....+|+++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999985 4443 22211 112467776 4677666554
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.079 Score=56.80 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=68.5
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCC---CceecccChhh-
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE--YVASLVGIPK---DKVLSGVKPNE- 771 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~--~ia~~~gi~~---~~v~~~~~p~~- 771 (932)
....+.+..|+++. -.+.+-|++.+++++|+++|+++.++|........ ...+++|++. +.++ ++.+
T Consensus 7 ~~~~~~~D~dG~l~----~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii---~s~~~ 79 (242)
T TIGR01459 7 DYDVFLLDLWGVII----DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMII---SSGEI 79 (242)
T ss_pred cCCEEEEecccccc----cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEE---ccHHH
Confidence 34556666666553 45678999999999999999999999986665544 5678999974 2332 2222
Q ss_pred HHHHHHHH-hh---CCCEEEEEcCCcccHHHHHhCCe
Q 002354 772 KKRFINEL-QN---DENVVAMVGDGINDAAALASSHI 804 (932)
Q Consensus 772 K~~~v~~l-~~---~g~~v~~vGDg~ND~~al~~A~v 804 (932)
....+... ++ .+..+.++||+.+|...+...+.
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 80 AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 11233322 22 35679999999999998865543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.028 Score=63.32 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=63.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCcee-cc-----c--ChhhHHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-SG-----V--KPNEKKR 774 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~v~-~~-----~--~p~~K~~ 774 (932)
-++.|++.+.+++|++.|++++++|.- ....+..+.+..|+..+.++ +. - ...-|..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~ 108 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTG 108 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHH
Confidence 367899999999999999999999973 24456778888888643333 21 0 0011233
Q ss_pred HHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 775 FINELQN----DENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 775 ~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
++..+.+ ....+.||||+.+|..+-+.|++-..
T Consensus 109 ~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 109 LVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 4433322 34789999999999999999998743
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.054 Score=54.33 Aligned_cols=104 Identities=22% Similarity=0.240 Sum_probs=83.0
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCe--EEEEcCC-------CHHHHHHHHHHcCCCCCce-ec
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIG--VYMLSGD-------KKNSAEYVASLVGIPKDKV-LS 765 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~--v~~~TGd-------~~~~a~~ia~~~gi~~~~v-~~ 765 (932)
..|.+.+.+..|+++.. --++++.|+..+.+++|++.+.. ++++|-. +...|..+.+.+|++ .+ +.
T Consensus 38 ~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~h~ 113 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLRHR 113 (168)
T ss_pred hcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEEeC
Confidence 46788888888998753 46789999999999999999874 9999975 488999999999996 33 44
Q ss_pred ccChhhHHHHHHHHhhC-----CCEEEEEcCC-cccHHHHHhCC
Q 002354 766 GVKPNEKKRFINELQND-----ENVVAMVGDG-INDAAALASSH 803 (932)
Q Consensus 766 ~~~p~~K~~~v~~l~~~-----g~~v~~vGDg-~ND~~al~~A~ 803 (932)
...|....++.+.++.+ .+.++||||- ..|+-+=...+
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 56887777888888765 6789999997 56766655544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.067 Score=67.30 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=49.9
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHc
Q 002354 694 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASLV 756 (932)
Q Consensus 694 ~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~~~ 756 (932)
+.....+.+++.+||+++-.-...-.+.++..+++++| ++.|+.|+++||+...+....-..+
T Consensus 591 y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 591 YKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred HHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 44456788999999999844333346678999999997 7889999999999999988777543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.051 Score=57.29 Aligned_cols=89 Identities=18% Similarity=0.241 Sum_probs=59.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCCC--Cceeccc-------Ch--hhHHHHHHHHh---hCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY-VASLVGIPK--DKVLSGV-------KP--NEKKRFINELQ---NDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~--~~v~~~~-------~p--~~K~~~v~~l~---~~g 783 (932)
++.|++.+.|+.|++.|+++.++||-....... ..+..++.. +.+++.- .| +-=...++.+. -..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 567999999999999999999999987654432 332234421 1232222 11 11133344443 234
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEE
Q 002354 784 NVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
+.++||||...|+.+-+.|++-..
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEE
Confidence 679999999999999999998643
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.056 Score=56.07 Aligned_cols=86 Identities=16% Similarity=0.223 Sum_probs=60.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c----cChhh--HHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPNE--KKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~----~~p~~--K~~~v~~l~~~g~~v~~v 789 (932)
.+-|++.++++.|++.|+++.++|+-.. ......+.+|+.. +.++. . ..|+- =..+.+.+.-....++||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 5678999999999999999999997655 4577888899842 22322 1 12321 122333333345789999
Q ss_pred cCCc-ccHHHHHhCCee
Q 002354 790 GDGI-NDAAALASSHIG 805 (932)
Q Consensus 790 GDg~-ND~~al~~A~vg 805 (932)
||.. +|+.+-+.|++-
T Consensus 184 gD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 184 GDSLRNDYQGARAAGWR 200 (203)
T ss_pred CCCchHHHHHHHHcCCe
Confidence 9997 899999988764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.019 Score=56.73 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=66.1
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceecc-cChhhHHHHHHHH---hhCCCEEEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-VKPNEKKRFINEL---QNDENVVAMV 789 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~~-~~p~~K~~~v~~l---~~~g~~v~~v 789 (932)
.-.+||++.+.++.|+ .++++.++|.-+...+..+.+.+++.. +.++++ -....|-.+.+.+ ......++||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3457999999999999 579999999999999999999999852 223322 1222232243333 3445789999
Q ss_pred cCCcccHHHHHhCCeeEEe
Q 002354 790 GDGINDAAALASSHIGVAM 808 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~ 808 (932)
||..+|..+-+.+++-|..
T Consensus 122 ~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 122 DDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred ECCHHHhhcCccCEEEecC
Confidence 9999999987777665543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.074 Score=56.39 Aligned_cols=79 Identities=19% Similarity=0.310 Sum_probs=62.1
Q ss_pred cccHHHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec----------------------ccCh-hh
Q 002354 719 RIRDDAAHVVNSL--SSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS----------------------GVKP-NE 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L--~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~----------------------~~~p-~~ 771 (932)
++.|+.++.++.+ ++.|+.++++|--|..--..+-+.-|+... .||+ .+.| --
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678899999999 568999999999999999999999998531 2222 1222 36
Q ss_pred HHHHHHHHhhC----C---CEEEEEcCCcccHH
Q 002354 772 KKRFINELQND----E---NVVAMVGDGINDAA 797 (932)
Q Consensus 772 K~~~v~~l~~~----g---~~v~~vGDg~ND~~ 797 (932)
|..+++.+++. | .+|.+||||.||.-
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 99999988765 4 68999999999963
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.11 Score=54.94 Aligned_cols=93 Identities=11% Similarity=0.182 Sum_probs=66.2
Q ss_pred ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--Cceec---ccCh--hhHHHHHHHHhhCCCE
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVLS---GVKP--NEKKRFINELQNDENV 785 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~---gi~~--~~v~~---~~~p--~~K~~~v~~l~~~g~~ 785 (932)
++-++.|++.+++++|+++|+++.++|..+......+-+.. ++.. +.+|. ...| +-=..+.+.+.-....
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 44578999999999999999999999988887777766664 3321 11221 1222 2224445555445578
Q ss_pred EEEEcCCcccHHHHHhCCeeEEe
Q 002354 786 VAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
++||||...|+.|-++|++-...
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEE
Confidence 99999999999999999997544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.24 Score=55.69 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=45.3
Q ss_pred hCCCeEEEEEECCEEEEEEEecc--cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 754 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~ 754 (932)
......+++.+||+++-+..--| .+.++++++|+.|.+ +..++++||++......+..
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHcC
Confidence 33557888899999986554333 367899999999994 57999999999888877654
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.13 Score=57.49 Aligned_cols=103 Identities=10% Similarity=0.145 Sum_probs=69.1
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCC--CceecccChhh-
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIPK--DKVLSGVKPNE- 771 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~--~~v~~~~~p~~- 771 (932)
....+++..||++. -.+.+-|++.++|++|+++|++++++|+++..+...++ +.+|++. +.++. +..
T Consensus 27 ~~~~~~~D~DGtl~----~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~t---s~~~ 99 (311)
T PLN02645 27 SVETFIFDCDGVIW----KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFS---SSFA 99 (311)
T ss_pred hCCEEEEeCcCCeE----eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEee---hHHH
Confidence 46678888888765 34667799999999999999999999999977666666 5688742 23332 221
Q ss_pred HHHHHHHHhh-CCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 772 KKRFINELQN-DENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 772 K~~~v~~l~~-~g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
....++.... .+.. .++++...|..+++.+++=+.-
T Consensus 100 ~~~~l~~~~~~~~~~-V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 100 AAAYLKSINFPKDKK-VYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred HHHHHHhhccCCCCE-EEEEcCHHHHHHHHHCCCEEec
Confidence 1222222211 1334 5555567899999998875543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.3 Score=63.28 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=76.2
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceecc-----cCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
+-|++.+.++.|+++|+++.++|+-....+..+.+.+|+.. +.+++. ..| +-=....+.+.-..+.++||
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 57899999999999999999999999999999999999851 233221 122 22234445554456789999
Q ss_pred cCCcccHHHHHhCCee-EEecCc---hHHHHhhcCEEEe
Q 002354 790 GDGINDAAALASSHIG-VAMGGG---VGAASEVASVVLM 824 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-Ia~~~~---~~~a~~~ad~vl~ 824 (932)
||..+|+.+-+.|++- |++..+ .+.....+|+++.
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~ 280 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK 280 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 9999999999999984 444322 2333456777774
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.54 Score=50.93 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=41.0
Q ss_pred EEEEEECCEEEEEEEeccc----ccHHHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCC
Q 002354 701 LVYVGVDNMLAGLIYVEDR----IRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIP 759 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~----lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~ 759 (932)
.+++..||++. -.++ +-|++.++|++|+++|++++++||++..+ .....+++|++
T Consensus 3 ~i~~D~DGtl~----~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 3 GVLLDISGVLY----ISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred EEEEeCCCeEE----eCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34555666654 3455 78899999999999999999999976665 44555667763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.17 Score=46.43 Aligned_cols=86 Identities=20% Similarity=0.302 Sum_probs=55.1
Q ss_pred EEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCC--CceecccChhhHHHHHHHHhh--CCCE
Q 002354 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIPK--DKVLSGVKPNEKKRFINELQN--DENV 785 (932)
Q Consensus 713 ~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~--~~v~~~~~p~~K~~~v~~l~~--~g~~ 785 (932)
.+...+++-|++.++|+.|+++|++++++|-.+..+...++ +.+|++. ++++ +|.+ ...+.|++ .+.+
T Consensus 8 vl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~---ts~~--~~~~~l~~~~~~~~ 82 (101)
T PF13344_consen 8 VLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII---TSGM--AAAEYLKEHKGGKK 82 (101)
T ss_dssp TSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE---EHHH--HHHHHHHHHTTSSE
T ss_pred EeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE---ChHH--HHHHHHHhcCCCCE
Confidence 34457889999999999999999999999977655444433 6778752 2232 2221 23333433 5789
Q ss_pred EEEEcCCcccHHHHHhCCe
Q 002354 786 VAMVGDGINDAAALASSHI 804 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~v 804 (932)
|..+|.. .....++.+++
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 9999986 66667776654
|
... |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.13 Score=53.70 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCC--Cceecc-----cChhhH--HHHHHHHhhCCCEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNS--AEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINELQNDENVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~--a~~ia~~~gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~ 787 (932)
++.|++.+.++.|+++|+++.++|...... ........++.. +.++.. ..|+-. ....+.+.-....++
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l 173 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV 173 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 568999999999999999999999865432 332233344421 233321 133221 233334433456799
Q ss_pred EEcCCcccHHHHHhCCeeE
Q 002354 788 MVGDGINDAAALASSHIGV 806 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgI 806 (932)
||||...|+.+-++|++-.
T Consensus 174 ~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 174 FLDDLGSNLKPAAALGITT 192 (211)
T ss_pred EEcCCHHHHHHHHHcCCEE
Confidence 9999999999999999853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR02052 MerP mercuric transport protein periplasmic component | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.55 Score=40.99 Aligned_cols=66 Identities=33% Similarity=0.485 Sum_probs=50.3
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
+..+.+.||.|..|...++..+...+++....++....+..+.++...... +.+...+++.||...
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~ 89 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNV--------KALTEATTDAGYPSS 89 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeE
Confidence 456779999999999999999999999989999999988777765432222 334455566777643
|
This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.33 Score=49.96 Aligned_cols=90 Identities=23% Similarity=0.300 Sum_probs=66.8
Q ss_pred cccHHHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCC------------------------CceecccChhh--
Q 002354 719 RIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPK------------------------DKVLSGVKPNE-- 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~------------------------~~v~~~~~p~~-- 771 (932)
++-|+..++|+.+++.|. .++++|--|.--...+-+..|+.. ..--|..-|..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 668999999999999997 899999889999999999999831 00112334433
Q ss_pred HHHHHHHHhhCC-------CEEEEEcCCcccH-HHHHhCCeeEEe
Q 002354 772 KKRFINELQNDE-------NVVAMVGDGINDA-AALASSHIGVAM 808 (932)
Q Consensus 772 K~~~v~~l~~~g-------~~v~~vGDg~ND~-~al~~A~vgIa~ 808 (932)
|..++..++.++ +++.++|||.||. |+++...--+||
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 677777665432 3799999999994 677666666666
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.38 Score=51.80 Aligned_cols=53 Identities=17% Similarity=0.334 Sum_probs=42.5
Q ss_pred EEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCC
Q 002354 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL---VGI 758 (932)
Q Consensus 702 ~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~---~gi 758 (932)
+++..||++ .-.+++-|++.++++.|+++|++++++|++...+...++++ +|+
T Consensus 4 v~~DlDGtL----~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 4 VICDIDGVL----MHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred EEEeCCCce----EeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 344455554 44678899999999999999999999999999888777776 466
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.1 Score=55.40 Aligned_cols=81 Identities=20% Similarity=0.335 Sum_probs=59.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCC-CceecccCh--------hhHHHHHHHHhhCCC-
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKN---SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDEN- 784 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~-~~v~~~~~p--------~~K~~~v~~l~~~g~- 784 (932)
++.-|++.+.++.+++.|++|+++||++.. ....-.++.|+.. +.++.+-.. +.|...-+.++++|+
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 355678999999999999999999998655 3344456778854 444433222 248888888888864
Q ss_pred EEEEEcCCcccHHH
Q 002354 785 VVAMVGDGINDAAA 798 (932)
Q Consensus 785 ~v~~vGDg~ND~~a 798 (932)
+++++||..+|...
T Consensus 194 Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 194 IIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEESSGGGCHC
T ss_pred EEEEeCCCHHHhhc
Confidence 67889999999754
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.43 Score=49.35 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=58.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--Ccee-cc----cChh--hHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVL-SG----VKPN--EKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~--~~v~-~~----~~p~--~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.++++.|++.|+++.++|.-+.......... .++.. +.++ +. ..|+ -=...++.+.-....++|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 4689999999999999999999998776655443222 23321 1222 21 1232 112334444444577999
Q ss_pred EcCCcccHHHHHhCCeeE
Q 002354 789 VGDGINDAAALASSHIGV 806 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgI 806 (932)
|||...|+.+-+.+++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999999854
|
|
| >COG4907 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.1 Score=58.38 Aligned_cols=12 Identities=67% Similarity=1.492 Sum_probs=4.8
Q ss_pred CCCCCCCCCCCC
Q 002354 87 GDVGGGGGGGGG 98 (932)
Q Consensus 87 ~~~~~~~~~~~~ 98 (932)
+|+.|||+||||
T Consensus 580 ~G~~gGg~GGGG 591 (595)
T COG4907 580 GGFSGGGSGGGG 591 (595)
T ss_pred CCcCCCCCCCCC
Confidence 333444444333
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.76 Score=49.52 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=44.3
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
.+++..||++. -.+..-+++.++|++|+++|++++++|| ++........+++|++
T Consensus 3 ~~~~D~DGtl~----~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 3 GYLIDLDGTMY----KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45566677665 3466667999999999999999999996 7788888888888874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=91.73 E-value=2.2 Score=46.74 Aligned_cols=98 Identities=15% Similarity=0.242 Sum_probs=64.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcCCCC--CceecccChhhHHH
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASLVGIPK--DKVLSGVKPNEKKR 774 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~---~ia~~~gi~~--~~v~~~~~p~~K~~ 774 (932)
..+++..||++. -.+..-+++.++|++|++.|++++++|++...+.. .-.+++|++. ++++ ++.. .
T Consensus 3 ~~~~~D~DGtl~----~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~ 73 (279)
T TIGR01452 3 QGFIFDCDGVLW----LGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLF---SSAL--C 73 (279)
T ss_pred cEEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe---cHHH--H
Confidence 345667777764 35677788999999999999999999997644332 3346678752 1222 2221 1
Q ss_pred HHHHHhh---CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 775 FINELQN---DENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 775 ~v~~l~~---~g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
..+.|++ .+..|.++|+. .....++.+++-+.
T Consensus 74 ~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 74 AARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 2233444 35689999985 45667777776654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.49 Score=48.15 Aligned_cols=85 Identities=14% Similarity=0.180 Sum_probs=63.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc---------cChhh--HHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG---------VKPNE--KKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~---------~~p~~--K~~~v~~l~~~g~~ 785 (932)
++.+++.+++++|+ .+++++|.-+...+..+.+.+|+.. +.+++. ..|+. =..+++.+......
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 46789999999998 4789999999999999999999852 233332 13322 23444555555678
Q ss_pred EEEEcCCcccHHHHHhCCeeE
Q 002354 786 VAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgI 806 (932)
++||||...|+.+-+.+++-.
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEE
Confidence 999999999999999988753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.35 Score=49.84 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=57.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------Cce-ecccChhhHHHHHHHH-hhCC-CEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------DKV-LSGVKPNEKKRFINEL-QNDE-NVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------~~v-~~~~~p~~K~~~v~~l-~~~g-~~v~~v 789 (932)
++.|++.+++++|++.+ +.+++|.-+.......-+.+|+.. +.+ .++... -|.++++.. ++.| ..++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEEe
Confidence 36889999999999875 566677654444444556676641 112 222222 134444332 2223 468899
Q ss_pred cCCcccHHHHHhC--Cee-EEecCc
Q 002354 790 GDGINDAAALASS--HIG-VAMGGG 811 (932)
Q Consensus 790 GDg~ND~~al~~A--~vg-Ia~~~~ 811 (932)
||..+|+.+-++| ++- |.+..+
T Consensus 152 gDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred CCCHHHHHHHHHHHcCCcEEEecch
Confidence 9999999999999 886 334344
|
2 hypothetical protein; Provisional |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.49 Score=48.23 Aligned_cols=81 Identities=15% Similarity=0.170 Sum_probs=58.8
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002354 724 AAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMVGDGIN 794 (932)
Q Consensus 724 ~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~vGDg~N 794 (932)
..+.++.|++. ++..++|+.....+..+.+.+|+.. +.+++. -.|+-=....+.+.-....++||||..+
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~ 170 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADF 170 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHh
Confidence 36889999875 8999999999999999999999852 223221 1122223334444434567899999999
Q ss_pred cHHHHHhCCee
Q 002354 795 DAAALASSHIG 805 (932)
Q Consensus 795 D~~al~~A~vg 805 (932)
|+.+-+.|++-
T Consensus 171 di~aA~~aG~~ 181 (188)
T PRK10725 171 GIQAARAAGMD 181 (188)
T ss_pred hHHHHHHCCCE
Confidence 99999999875
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.31 Score=51.23 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=62.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceecc-c----Ch--hhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~~-~----~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.| ++++.++|+.+...+...-+..|+.. +.+++. - .| +-=....+.+.-....++|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 4568999999988 48999999999888888888899852 123222 1 12 2113333344334467999
Q ss_pred EcCCcccHHHHHhCCeeEEe
Q 002354 789 VGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~ 808 (932)
|||..+|+.+-+.|++....
T Consensus 165 igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EeCcHhhHHHHHHCCCEEEE
Confidence 99999999999999988654
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=90.40 E-value=1.1 Score=53.05 Aligned_cols=85 Identities=18% Similarity=0.177 Sum_probs=62.3
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCceec-------------c------cChhhHHHHHHHH
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPKDKVLS-------------G------VKPNEKKRFINEL 779 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~v~~-------------~------~~p~~K~~~v~~l 779 (932)
+++++.+.+ +++|.+ +++|+-...-++.+|++ +|++. +.+ + +.-++|.+-++..
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~--VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~ 184 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADK--VLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKE 184 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCE--EEecccEECcCCEEeeeecCCCCCccHHHHHHHHHH
Confidence 677766644 567754 99999999999999987 89872 211 1 2335688877754
Q ss_pred hhCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 002354 780 QNDENVVAMVGDGINDAAALASSHIGVAMGG 810 (932)
Q Consensus 780 ~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~ 810 (932)
........+.||..||.|||+.|+-..+++.
T Consensus 185 ~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 185 FGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred hCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 3222223789999999999999999999975
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=90.31 E-value=1.5 Score=47.42 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=54.5
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCC-CceecccCh--------hhHHHHHHHHhhCC
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN----SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDE 783 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~----~a~~ia~~~gi~~-~~v~~~~~p--------~~K~~~v~~l~~~g 783 (932)
+.+.-|++.+..+.+++.|++|+++||+... |...+ ++.|++. +.++-|-.. +.|...-+++.++|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 3456789999999999999999999999864 33333 4578853 344444221 22444445556666
Q ss_pred C-EEEEEcCCcccH
Q 002354 784 N-VVAMVGDGINDA 796 (932)
Q Consensus 784 ~-~v~~vGDg~ND~ 796 (932)
+ +++.+||..+|.
T Consensus 222 YrIv~~iGDq~sDl 235 (275)
T TIGR01680 222 YNIVGIIGDQWNDL 235 (275)
T ss_pred ceEEEEECCCHHhc
Confidence 5 677799999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.92 E-value=1.3 Score=45.17 Aligned_cols=49 Identities=22% Similarity=0.348 Sum_probs=39.6
Q ss_pred EEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHH---HHHcCC
Q 002354 710 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV---ASLVGI 758 (932)
Q Consensus 710 ~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~i---a~~~gi 758 (932)
+-|.+..+|..-|++.|++++|++++.+|..+|--..+.-+.+ -+++|+
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 5688999999999999999999999999999986555544444 445665
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.50 E-value=2.6 Score=41.77 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=66.3
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHc-----CCCCCc---------------eecccChhhHH
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA---EYVASLV-----GIPKDK---------------VLSGVKPNEKK 773 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a---~~ia~~~-----gi~~~~---------------v~~~~~p~~K~ 773 (932)
.|..++++.+..+++++.|++++-+|+++..-+ +...++. +++.-. +..+-..+.|.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 378999999999999999999999999986554 3344444 565432 22223346788
Q ss_pred HHHHHHhhC-----CCEEEEEcCCcccHHHHHhCCee
Q 002354 774 RFINELQND-----ENVVAMVGDGINDAAALASSHIG 805 (932)
Q Consensus 774 ~~v~~l~~~-----g~~v~~vGDg~ND~~al~~A~vg 805 (932)
..++.++.. ....+.+|+..+|+.+-+++++-
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 888888764 34577789999999999888764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=86.90 E-value=1.8 Score=51.52 Aligned_cols=104 Identities=13% Similarity=0.221 Sum_probs=66.8
Q ss_pred CeEEEEEECCEEEEE----EEecc--c---ccHHHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcC
Q 002354 699 QSLVYVGVDNMLAGL----IYVED--R---IRDDAAHVVNSLSSQGIGVYMLSGDKK------------NSAEYVASLVG 757 (932)
Q Consensus 699 ~~~~~va~~~~~lG~----i~l~D--~---lr~~~~~~i~~L~~~Gi~v~~~TGd~~------------~~a~~ia~~~g 757 (932)
..++++..|++++-. ....| . +-|++.+.|+.|++.|++++|+|.-.. ..+..+.+++|
T Consensus 168 ~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lg 247 (526)
T TIGR01663 168 EKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLG 247 (526)
T ss_pred CcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcC
Confidence 357778888877632 11222 1 368999999999999999999997544 34788899999
Q ss_pred CCCCceecccC-hhhH--HHHHHH-HhhC-------CCEEEEEcCCcccHHHHHhC
Q 002354 758 IPKDKVLSGVK-PNEK--KRFINE-LQND-------ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 758 i~~~~v~~~~~-p~~K--~~~v~~-l~~~-------g~~v~~vGDg~ND~~al~~A 802 (932)
++-+.+++.-. .-.| ...+.. +++. .....||||...|..+-+.|
T Consensus 248 ipfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 248 VPFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred CceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhc
Confidence 97544433211 0011 122222 2222 24689999999998764443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=86.66 E-value=1.4 Score=48.04 Aligned_cols=60 Identities=17% Similarity=0.177 Sum_probs=51.1
Q ss_pred CCeEEEEEECCEEEEEEEeccc--cc-HHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDR--IR-DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK 760 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~--lr-~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 760 (932)
-..++++..|++++.- +.+ +| |++.+++++|+++|++++++|+.....+...-+++|++.
T Consensus 125 ~~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 3467888889988753 443 55 999999999999999999999999999999999999973
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN03138 Protein TOC75; Provisional | Back alignment and domain information |
|---|
Probab=86.14 E-value=0.68 Score=56.95 Aligned_cols=14 Identities=14% Similarity=0.043 Sum_probs=8.1
Q ss_pred HHhcCCCeeEEEee
Q 002354 147 ILESQPQVSSASVN 160 (932)
Q Consensus 147 ~L~~~~GV~~~~Vn 160 (932)
-|+++.|-++..|+
T Consensus 138 ~~~~~~~~~~~~vs 151 (796)
T PLN03138 138 PLSKLSGFKRYKVS 151 (796)
T ss_pred echhcCCcceEEEE
Confidence 45666666555544
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.23 E-value=2.4 Score=44.83 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=71.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---ceecc------cChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVLSG------VKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~---~v~~~------~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|+++|+.+.+.|+-+...+..+.+.+|+... .+.+. -.|+-=..-.+.|.-....++.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV 164 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence 47889999999999999999999999999999999999998521 12221 2233334445555456778999
Q ss_pred EcCCcccHHHHHhCCeeEEe
Q 002354 789 VGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~ 808 (932)
|.|..|.+.|-++|+.-+-.
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred EecchhHHHHHHHCCCEEEE
Confidence 99999999999999987543
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=84.64 E-value=2.4 Score=45.08 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=30.0
Q ss_pred EEECCEEEEEEEecc--cccHHHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCC
Q 002354 704 VGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 704 va~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~G-i~v~~~TGd~~~~a~~ia~~~gi 758 (932)
+.+||++..+..-.+ .+.+++.+++++|.+.. ..|+|+||++......+..--++
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i 59 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNI 59 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCc
Confidence 456666665554333 45689999999998764 47999999999996555444443
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.80 E-value=1.7 Score=46.42 Aligned_cols=84 Identities=17% Similarity=0.257 Sum_probs=55.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-ccc----ChhhH--HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGV----KPNEK--KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~----~p~~K--~~~v~~l~~~g~~v~~v 789 (932)
++-|++.++++.|++. +++.++|..+.. .+..|+.. +.++ +.. .|.-. ....+.+.-....++||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4568999999999975 899999875544 25677742 1222 221 23211 22233343345679999
Q ss_pred cCC-cccHHHHHhCCeeEEe
Q 002354 790 GDG-INDAAALASSHIGVAM 808 (932)
Q Consensus 790 GDg-~ND~~al~~A~vgIa~ 808 (932)
||. ..|+.+-+.|++-...
T Consensus 187 GD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred cCCcHHHHHHHHHCCCeEEE
Confidence 999 5999999999986544
|
|
| >PRK13748 putative mercuric reductase; Provisional | Back alignment and domain information |
|---|
Probab=83.00 E-value=3.6 Score=49.88 Aligned_cols=67 Identities=34% Similarity=0.510 Sum_probs=53.1
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.+.++||+|++|..+++..+...+++....+++..+...+.+++. ... +.+...+++.||...+...
T Consensus 3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~g~~~~~~~~ 69 (561)
T PRK13748 3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG-TSP--------DALTAAVAGLGYRATLADA 69 (561)
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCC-CCH--------HHHHHHHHHcCCeeeccCc
Confidence 466899999999999999999999999999999999988887542 222 4455667888998665444
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.91 E-value=9.7 Score=41.40 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=73.0
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CC--CCceecccChhhHH
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IP--KDKVLSGVKPNEKK 773 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~--~~~v~~~~~p~~K~ 773 (932)
..+.+..| |.+.-.++.=|++.++|++|+++|++++++|-.+..+...+++++. ++ .+.++ ++.+
T Consensus 9 ~~~l~DlD----Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~---TS~~-- 79 (269)
T COG0647 9 DGFLFDLD----GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIV---TSGD-- 79 (269)
T ss_pred CEEEEcCc----CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHee---cHHH--
Confidence 34444444 4555788999999999999999999999999887777665555443 21 11222 1111
Q ss_pred HHHHHHhhC--CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC
Q 002354 774 RFINELQND--ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827 (932)
Q Consensus 774 ~~v~~l~~~--g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~ 827 (932)
.....++++ +.+|.++|. ..+...|+.+++-+.-.... ...|+|+...|
T Consensus 80 at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~~~~~----~~~d~Vv~g~d 130 (269)
T COG0647 80 ATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVDEEEP----ARVDAVVVGLD 130 (269)
T ss_pred HHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEeccCCC----CcccEEEEecC
Confidence 122333332 368999995 56778899998877664221 11677777433
|
|
| >COG2177 FtsX Cell division protein [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=81.76 E-value=90 Score=34.55 Aligned_cols=22 Identities=32% Similarity=0.308 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHhcCCCeeEEEe
Q 002354 138 GGCAASVKRILESQPQVSSASV 159 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~V 159 (932)
..|...+++.+++.|||++++.
T Consensus 71 ~~~~~~v~~~i~~~~gV~~v~~ 92 (297)
T COG2177 71 QDDAALVREKIEGIPGVKSVRF 92 (297)
T ss_pred hHHHHHHHHHHhcCCCcceEEE
Confidence 8999999999999999988764
|
|
| >cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Probab=81.54 E-value=9.5 Score=27.40 Aligned_cols=42 Identities=40% Similarity=0.631 Sum_probs=35.2
Q ss_pred EecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCC
Q 002354 131 DVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172 (932)
Q Consensus 131 ~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~ 172 (932)
.+.++.|..|...++..+...+++.....++......+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (63)
T cd00371 3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDP 44 (63)
T ss_pred eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECC
Confidence 468999999999999999999998888888887776666643
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=80.60 E-value=3.8 Score=41.34 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=60.0
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC----------CCceecccChhhHHHHHHHHhhC----CC
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIP----------KDKVLSGVKPNEKKRFINELQND----EN 784 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~T-Gd~~~~a~~ia~~~gi~----------~~~v~~~~~p~~K~~~v~~l~~~----g~ 784 (932)
+-|+++++++.|++.|+++.++| -+.+..|+++-+.++++ ..--+.+.-|..|....+.++++ -.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~ 125 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYE 125 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChh
Confidence 46899999999999999999999 47889999999999998 22223456678999998888764 34
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEe
Q 002354 785 VVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
.++++=|-.......+. +||..
T Consensus 126 eMlFFDDe~~N~~~v~~--lGV~~ 147 (169)
T PF12689_consen 126 EMLFFDDESRNIEVVSK--LGVTC 147 (169)
T ss_dssp GEEEEES-HHHHHHHHT--TT-EE
T ss_pred HEEEecCchhcceeeEe--cCcEE
Confidence 68888887666666554 44433
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=80.03 E-value=4.7 Score=38.59 Aligned_cols=50 Identities=10% Similarity=0.028 Sum_probs=37.0
Q ss_pred EEEEEECCEEEEEE--E-ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 002354 701 LVYVGVDNMLAGLI--Y-VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 750 (932)
Q Consensus 701 ~~~va~~~~~lG~i--~-l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~ 750 (932)
.+++..||+++--= . ..+++.+++.+++++|++.|++++++||++.....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 45566677764100 0 12568899999999999999999999999887543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 932 | ||||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-96 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 7e-94 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 6e-90 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-27 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 8e-27 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-24 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-23 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 8e-22 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-17 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-16 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-16 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-16 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-15 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 8e-14 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 7e-10 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-09 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-08 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-08 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-08 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-07 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 9e-07 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-06 | ||
| 2rml_A | 147 | Solution Structure Of The N-Terminal Soluble Domain | 3e-04 | ||
| 1p6t_A | 151 | Structure Characterization Of The Water Soluble Reg | 4e-04 | ||
| 1opz_A | 76 | A Core Mutation Affecting The Folding Properties Of | 6e-04 |
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2RML|A Chain A, Solution Structure Of The N-Terminal Soluble Domains Of Bacillus Subtilis Copa Length = 147 | Back alignment and structure |
|
| >pdb|1P6T|A Chain A, Structure Characterization Of The Water Soluble Region Of P- Type Atpase Copa From Bacillus Subtilis Length = 151 | Back alignment and structure |
|
| >pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76 | Back alignment and structure |
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 932 | |||
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.84 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.62 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.59 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 99.57 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.44 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 99.43 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.41 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.3 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.3 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 99.28 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.27 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.27 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.25 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.25 | |
| 4a4j_A | 69 | Pacszia, cation-transporting ATPase PACS; hydrolas | 99.21 | |
| 3fry_A | 73 | Probable copper-exporting P-type ATPase A; transpo | 99.14 | |
| 3iwl_A | 68 | Copper transport protein ATOX1; beta-alpha-beta-BE | 99.11 | |
| 1osd_A | 72 | MERP, hypothetical protein MERP; mercury resistanc | 99.08 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.08 | |
| 2l3m_A | 71 | Copper-ION-binding protein; structural genomics, c | 99.06 | |
| 1kvi_A | 79 | Copper-transporting ATPase 1; menkes, Cu-protein, | 99.05 | |
| 2g9o_A | 90 | Copper-transporting ATPase 1; menkes disease, solu | 99.05 | |
| 3cjk_B | 75 | Copper-transporting ATPase 1; HAH1, ATP7B, menkes | 99.05 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.04 | |
| 1y3j_A | 77 | Copper-transporting ATPase 1; ferrodoxin-like fold | 99.04 | |
| 1q8l_A | 84 | Copper-transporting ATPase 1; metal binding protei | 99.03 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.03 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.03 | |
| 1aw0_A | 72 | Menkes copper-transporting ATPase; copper-binding | 99.02 | |
| 1cpz_A | 68 | Protein (COPZ); copper chaperone, metal transport, | 99.01 | |
| 2xmw_A | 71 | PACS-N, cation-transporting ATPase PACS; hydrolase | 99.01 | |
| 2qif_A | 69 | Copper chaperone COPZ; tetranuclear Cu(I) cluster; | 99.01 | |
| 2kt2_A | 69 | Mercuric reductase; nmera, MERA, HMA domain, mercu | 99.01 | |
| 1mwy_A | 73 | ZNTA; open-faced beta-sandwich fold, beta-alpha-be | 99.0 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.99 | |
| 1yg0_A | 66 | COP associated protein; open-faced beta-sandwich, | 98.99 | |
| 2ldi_A | 71 | Zinc-transporting ATPase; metal homeostasis, metal | 98.98 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.98 | |
| 1yjr_A | 75 | Copper-transporting ATPase 1; metallochaperone, pr | 98.97 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.97 | |
| 1opz_A | 76 | Potential copper-transporting ATPase; mutation, fo | 98.96 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.95 | |
| 1fvq_A | 72 | Copper-transporting ATPase; APO-CCC2A, hydrolase; | 98.95 | |
| 1jww_A | 80 | Potential copper-transporting ATPase; beta-alpha-b | 98.94 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.92 | |
| 2ofg_X | 111 | Zinc-transporting ATPase; ferredoxin-like fold, be | 98.92 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.91 | |
| 2kkh_A | 95 | Putative heavy metal transporter; zinc transport, | 98.89 | |
| 1cc8_A | 73 | Protein (metallochaperone ATX1); copper transport, | 98.88 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.88 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 98.88 | |
| 2roe_A | 66 | Heavy metal binding protein; NMR {Thermus thermoph | 98.87 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 98.87 | |
| 2k2p_A | 85 | Uncharacterized protein ATU1203; putative metal-bi | 98.86 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.86 | |
| 2xmm_A | 64 | SSR2857 protein, ATX1; metal transport, copper hom | 98.85 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.84 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.83 | |
| 2crl_A | 98 | Copper chaperone for superoxide dismutase; SOD1, f | 98.81 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.81 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.8 | |
| 2kyz_A | 67 | Heavy metal binding protein; structural genomics, | 98.8 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.78 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.77 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.76 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.71 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 98.71 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.7 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.63 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.63 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.61 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 98.61 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.58 | |
| 2aj0_A | 71 | Probable cadmium-transporting ATPase; ferrodoxin-l | 98.57 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.53 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.53 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.52 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.51 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.45 | |
| 1qup_A | 222 | Superoxide dismutase 1 copper chaperone; two domai | 98.44 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.43 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.42 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.41 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.4 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 98.38 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 98.38 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.37 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.36 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.36 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.34 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.33 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.32 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.29 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.27 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.27 | |
| 1jk9_B | 249 | CCS, copper chaperone for superoxide dismutase; pr | 98.26 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.25 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.25 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.22 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.2 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.2 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.18 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.17 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.16 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.16 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.15 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.15 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.14 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.14 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.13 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.12 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.11 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.1 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.07 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.06 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.02 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.02 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.01 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.01 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.98 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.98 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.97 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.92 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.92 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.87 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.86 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.85 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.85 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.84 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.82 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.8 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.8 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.79 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.78 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.78 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.78 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.74 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.7 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.66 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.65 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.5 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.49 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.45 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.39 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.39 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.28 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.23 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.19 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.18 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.18 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.13 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.1 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.05 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.03 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.87 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.87 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.85 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.73 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.72 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.67 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.65 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.63 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.6 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.55 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.44 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.09 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 96.06 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.36 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.18 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.9 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.35 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 94.1 | |
| 2pk2_A | 358 | Cyclin-T1, protein TAT; TAR, twinning, transcripti | 93.23 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.01 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 92.84 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.74 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 92.55 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 91.36 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 90.38 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.3 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 87.22 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 86.63 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 85.76 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.01 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 83.46 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.31 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.62 |
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-123 Score=1138.17 Aligned_cols=712 Identities=35% Similarity=0.538 Sum_probs=640.3
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccCCC
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGT 206 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 206 (932)
++++.|+||+|++|+++||++|++++||.+++||+.++++.|.||+...+. +++.++++++||++...++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~--------~~i~~ai~~~Gy~~~~~~~~~ 74 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDF--------ETIKRVIEDLGYGVVDEQAAV 74 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHCCEESSCCCCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCH--------HHHHHHHHhcCCccccccccc
Confidence 468999999999999999999999999999999999999999999887776 889999999999986544321
Q ss_pred ccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHH
Q 002354 207 DNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGV 286 (932)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~ 286 (932)
... + ++.++..++++++++++++.++..+ ++.. |. ..|+.+++++|+++|+|||||++||
T Consensus 75 ~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-----~~~~~~~l~~~~~~~~g~~~~~~a~ 134 (723)
T 3j09_A 75 SAE-------V----EHLSRMKRKLYVAAFAGVLLLFLAH---FISL-PY-----EDFVQLLIALPAIFYSGSSIFKAAF 134 (723)
T ss_dssp CCC-------C----CCCCCSCCCSSSTTTTHHHHHHHTT---SSCS-SS-----SCCSCCSTHHHHHHHHHHHHHHHTC
T ss_pred chh-------h----HHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc-ch-----HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 110 0 1223445677777666665543221 1111 11 2366778899999999999999999
Q ss_pred HHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEE
Q 002354 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKAR 366 (932)
Q Consensus 287 ~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~ 366 (932)
++|++|.+|||+|+++|++++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|++++
T Consensus 135 ~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~ 214 (723)
T 3j09_A 135 SALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV 214 (723)
T ss_dssp CTTTTCSTTSCSSCSCHHHHHHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEE
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeE
Confidence 99999999999999999999999999988764222234899999999999999999999999999999999999999999
Q ss_pred EEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEE
Q 002354 367 LLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVE 446 (932)
Q Consensus 367 vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~ 446 (932)
|+|+ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+||.||+||++.+|.++++
T Consensus 215 v~r~----g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~ 290 (723)
T 3j09_A 215 VIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIR 290 (723)
T ss_dssp EEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEE
T ss_pred EEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEE
Confidence 9986 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHH
Q 002354 447 VRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCS 526 (932)
Q Consensus 447 V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 526 (932)
|+++|.+|.+++|++++++++.+++|+|+.+|+++.+|++++++++++++++|+++.. .++..++.++++
T Consensus 291 v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~ 360 (723)
T 3j09_A 291 ATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIA 360 (723)
T ss_dssp EEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT----------CTTCCSHHHHHH
T ss_pred EEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988766532 234557888999
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCC
Q 002354 527 VLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP 606 (932)
Q Consensus 527 vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~ 606 (932)
+++++|||+|++++|+++..++.+++++|+++|+++++|.+|++|+||||||||||+|+|+|.+++..
T Consensus 361 vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~------------ 428 (723)
T 3j09_A 361 VLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL------------ 428 (723)
T ss_dssp HHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES------------
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCc
Q 002354 607 IHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS 686 (932)
Q Consensus 607 ~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~ 686 (932)
+.++++++.+++.+|.+++||+++|++++++..+.... +..+++..+++|+.+ +.+.+|+++++.+.+....
T Consensus 429 --~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~--~~~~~~~~~g~g~~~----~~~~~g~~~~~~~~~~~~~ 500 (723)
T 3j09_A 429 --NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVS 500 (723)
T ss_dssp --SSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCC
T ss_pred --CCCHHHHHHHHHHHhccCCCchhHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhcCCCcc
Confidence 24578899999999999999999999999998877532 346788999999987 6789999999998776543
Q ss_pred h--hhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCcee
Q 002354 687 T--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 764 (932)
Q Consensus 687 ~--~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~ 764 (932)
. ....+..+.++.+++++++|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|++ .++
T Consensus 501 ~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~ 578 (723)
T 3j09_A 501 NEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVI 578 (723)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc--EEE
Confidence 2 122344567899999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002354 765 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 844 (932)
Q Consensus 765 ~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 844 (932)
++++|++|.++++.+|++ +.|+|+|||.||+|||++||+|||||+|++.++++||+|+++++++++.+++++||+++++
T Consensus 579 ~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~ 657 (723)
T 3j09_A 579 AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSK 657 (723)
T ss_dssp CSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccc
Q 002354 845 VKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 903 (932)
Q Consensus 845 i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~ 903 (932)
|+||+.|+++||++++|+|+++++|++|+.++|++|+++|.+||++|++||+||++.++
T Consensus 658 i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 716 (723)
T 3j09_A 658 IKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 716 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999976543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-120 Score=1101.79 Aligned_cols=647 Identities=37% Similarity=0.589 Sum_probs=594.1
Q ss_pred hHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCCchhHHHH
Q 002354 223 RLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGL 302 (932)
Q Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~nmd~Li~l 302 (932)
+.++.++|++++++++++.++..+..++ ...++......|+.++|++|+++|+|||||++||++|++|.+|||+|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~l 154 (736)
T 3rfu_A 77 EYLDMRRRFWIALMLTIPVVILEMGGHG--LKHFISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAM 154 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCC--TTSSCSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCChHHHHHH
Confidence 3445667899999998887765543222 01111122345889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccc----------ccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecC
Q 002354 303 GAVSSFTVSSLAALVPKL----------GWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND 372 (932)
Q Consensus 303 ~~~~a~~~s~~~~~~~~~----------~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~ 372 (932)
|+.++|+||++.++.+.. ..+.||++++++++++++|+++|.++++|+++++++|.++.|+++++++++
T Consensus 155 ~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~d- 233 (736)
T 3rfu_A 155 GIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKED- 233 (736)
T ss_dssp HHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETT-
T ss_pred HHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC-
Confidence 999999999999886421 125799999999999999999999999999999999999999999999843
Q ss_pred CCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCC
Q 002354 373 AKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGG 452 (932)
Q Consensus 373 ~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~ 452 (932)
|++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|.+|+.|++||+|.+|.++++|+++|.
T Consensus 234 --g~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~ 311 (736)
T 3rfu_A 234 --GSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGS 311 (736)
T ss_dssp --EEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCST
T ss_pred --CEEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEech
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHh
Q 002354 453 ETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVAC 532 (932)
Q Consensus 453 ~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~ 532 (932)
+|.++||++++++++.+++|+|+.+|+++.+|+++++++++++|++|++++.. ..|..++.+++++|+++|
T Consensus 312 ~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~---------~~~~~~l~~ai~vlviac 382 (736)
T 3rfu_A 312 DTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ---------PALSYGLIAAVSVLIIAC 382 (736)
T ss_dssp TSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------SSTTHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------chHHHHHHHHHHhHHHhh
Confidence 99999999999999999999999999999999999999999999999887532 135678999999999999
Q ss_pred hhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCH
Q 002354 533 PCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE 612 (932)
Q Consensus 533 P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 612 (932)
||+|++++|++++.++.+++++|+++|+++++|+++++|+||||||||||+|+|+|.+++. ++.++
T Consensus 383 PcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~--------------~~~~~ 448 (736)
T 3rfu_A 383 PCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVT--------------DDFVE 448 (736)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEE--------------SSSCH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEe--------------cCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999983 34567
Q ss_pred HHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhh-hH
Q 002354 613 TEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ-EV 691 (932)
Q Consensus 613 ~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~-~~ 691 (932)
++++.+++++|..++||+++|+++++++.+.... +..+|+..+|+|+.+.++++.+.+|+++++.+.+.+..... ..
T Consensus 449 ~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~~~~--~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~ 526 (736)
T 3rfu_A 449 DNALALAAALEHQSEHPLANAIVHAAKEKGLSLG--SVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFEKA 526 (736)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHTTCCCCC--CCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHhcCCCcc--CcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhHHHHHH
Confidence 8999999999999999999999999998776532 34678889999999999999999999999998877654332 33
Q ss_pred HHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhh
Q 002354 692 EMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771 (932)
Q Consensus 692 ~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~ 771 (932)
+..+.+|.+++++++|++++|++.++|++|++++++|++|+++|++++|+|||+..++..+++++||+ .++++++|++
T Consensus 527 ~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~~~P~~ 604 (736)
T 3rfu_A 527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAEIMPED 604 (736)
T ss_dssp HHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECSCCHHH
T ss_pred HHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEecCHHH
Confidence 44667899999999999999999999999999999999999999999999999999999999999998 7999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWW 851 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~ 851 (932)
|.++|+.+|++|+.|+|+|||.||+|||++||+|||||+|+|.++++||+|++++++++|++++++||+++++||||++|
T Consensus 605 K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~ 684 (736)
T 3rfu_A 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFF 684 (736)
T ss_dssp HHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccc
Q 002354 852 AFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 901 (932)
Q Consensus 852 a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~ 901 (932)
+++||+++||+|+|++||++|+.++|++|+++|.+||++|++||+||++.
T Consensus 685 a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~~ 734 (736)
T 3rfu_A 685 AFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRV 734 (736)
T ss_dssp HHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999999999999988899999999999999999999999754
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-112 Score=1026.38 Aligned_cols=632 Identities=37% Similarity=0.566 Sum_probs=575.7
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCCchhHHHHHHH
Q 002354 226 ESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAV 305 (932)
Q Consensus 226 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~nmd~Li~l~~~ 305 (932)
+.++|++++++++++.++..+ ++. .|. ..|+.+++++|+++|+|||||++||+++++|.+|||+|+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-----~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~l~~~ 75 (645)
T 3j08_A 5 RMKRKLYVAAFAGVLLLFLAH---FIS-LPY-----EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVG 75 (645)
T ss_dssp SSSSSSSSSSCSHHHHHHHTT---TCC-SCC-----CSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---Hhh-cch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 445678888877777665432 111 111 23677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCc
Q 002354 306 SSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSL 385 (932)
Q Consensus 306 ~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~L 385 (932)
++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|++++|+|+ |++++|++++|
T Consensus 76 ~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~----g~~~~i~~~~l 151 (645)
T 3j08_A 76 AAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRD----GKEIAVPVEEV 151 (645)
T ss_dssp HHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEET----TEEEEEEGGGC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC----CEEEEEEHHHC
Confidence 99999999877532222348999999999999999999999999999999999999999999986 58999999999
Q ss_pred cCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHH
Q 002354 386 HVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (932)
Q Consensus 386 v~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 465 (932)
+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||++.+|.++++|+++|.+|.+++|.+++++
T Consensus 152 ~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~ 231 (645)
T 3j08_A 152 AVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED 231 (645)
T ss_dssp CTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSC
T ss_pred CCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHH
Q 002354 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAML 545 (932)
Q Consensus 466 a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~ 545 (932)
++.+++|+|+.+|+++.+|++++++++++++++|+++.. .++..++.+++++++++|||+|++++|+++.
T Consensus 232 a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~vlvia~P~aL~la~p~a~~ 301 (645)
T 3j08_A 232 AMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIAVLVVACPCAFGLATPTALT 301 (645)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS----------CSCCCTTTTTHHHHHHHSCTTHHHHHHHHHH
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999988866532 1234456778999999999999999999999
Q ss_pred HHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc
Q 002354 546 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 625 (932)
Q Consensus 546 ~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~ 625 (932)
.++.+++++|+++|+++++|.++++|+||||||||||+|+|+|.+++.. +.++++++++++.+|.+
T Consensus 302 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~--------------~~~~~~~l~~aa~~e~~ 367 (645)
T 3j08_A 302 VGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--------------NGDERELLRLAAIAERR 367 (645)
T ss_dssp HHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES--------------SSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC--------------CCCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999875 24578899999999999
Q ss_pred CCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCch--hhhHHHHHhCCCeEEE
Q 002354 626 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST--FQEVEMEDLMNQSLVY 703 (932)
Q Consensus 626 s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~--~~~~~~~~~~g~~~~~ 703 (932)
++||+++|+++++++.+.... +.+++...+|+|+.+ +.+.+|+++++.+.+..... ....+..+.++.++++
T Consensus 368 s~hPla~Aiv~~a~~~g~~~~--~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 441 (645)
T 3j08_A 368 SEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVI 441 (645)
T ss_dssp CCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEE
T ss_pred CCChhHHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEE
Confidence 999999999999998877632 346788999999887 67899999999887765432 1223345677999999
Q ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCC
Q 002354 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDE 783 (932)
Q Consensus 704 va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g 783 (932)
+++|++++|++.++|++||+++++|++|+++|++++|+|||+..+++.+++++|++ .++++++|++|.++++.+|++
T Consensus 442 va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~P~~K~~~v~~l~~~- 518 (645)
T 3j08_A 442 VARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK- 518 (645)
T ss_dssp EEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTT-
T ss_pred EEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeCCHHhHHHHHHHHhhC-
Confidence 99999999999999999999999999999999999999999999999999999998 899999999999999999998
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIA 863 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la 863 (932)
+.|+|+|||.||++||+.||+|||||+|++.++++||+++.+++++++.+++++||+++++||||+.|+++||++++|+|
T Consensus 519 ~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 519 EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccc
Q 002354 864 AGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 903 (932)
Q Consensus 864 ~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~ 903 (932)
+++++|++|+.++|++|+++|.+||++|++||+||++.++
T Consensus 599 ~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 638 (645)
T 3j08_A 599 AGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 638 (645)
T ss_dssp TTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhccCCC
Confidence 9999999999999999999999999999999999976543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-86 Score=814.04 Aligned_cols=503 Identities=22% Similarity=0.277 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEee
Q 002354 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408 (932)
Q Consensus 329 ~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G 408 (932)
+++++++++++..++.++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 144 ~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~Rd----G~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g 219 (920)
T 1mhs_A 144 FGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRD----GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTD 219 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECS----SSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEEC----CEEEEEEHHHcCCCCEEEeCCCCccccceEEEec
Confidence 355667778888899999999999999999999999999987 5899999999999999999999999999999999
Q ss_pred ee--EEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHH
Q 002354 409 RS--TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (932)
Q Consensus 409 ~~--~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~ 486 (932)
++ .||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.++++
T Consensus 220 ~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~ 299 (920)
T 1mhs_A 220 DAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLI 299 (920)
T ss_dssp SSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHH
Confidence 74 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHh
Q 002354 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEK 566 (932)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~ 566 (932)
+++++++++|+.|++ .+.++..++.+++++++++|||+|++++|++++.+..+++++|+++|+++++|+
T Consensus 300 ~~~~~~~i~~~~~~~-----------~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~ 368 (920)
T 1mhs_A 300 LVIFTLLIVWVSSFY-----------RSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIES 368 (920)
T ss_dssp HHHHHHHHHHHTTTT-----------TTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHH
T ss_pred HHHHHHHHHHHHHHh-----------cCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhh
Confidence 877777665554322 234577889999999999999999999999999999999999999999999999
Q ss_pred cccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH-HhcccCC--CcHHHHHHHHHHhcCC
Q 002354 567 FAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAA-GVESNTV--HPIGKAIVEAAEFSNC 643 (932)
Q Consensus 567 lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa-~~e~~s~--hPi~~Ai~~~a~~~~~ 643 (932)
||++|+||||||||||+|+|+|.+++..+ ++++++++..++ +.+..+. ||+++|+++++...+.
T Consensus 369 Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~-------------g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~ 435 (920)
T 1mhs_A 369 LAGVEILCSDKTGTLTKNKLSLHDPYTVA-------------GVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPR 435 (920)
T ss_dssp HHTCCEEEEETBTTTBSSCSCCCCCBCCS-------------CCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSS
T ss_pred hccCcEEEECCCCCccccceeEEEEeecC-------------CCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhccc
Confidence 99999999999999999999999886541 222234443332 2344455 9999999998876543
Q ss_pred cccccc-CCCeE----EecCCeeEEEEc---Ce--EEEeecHHHHhhcCCCCch---------hhhHHHHHhCCCeEEEE
Q 002354 644 QNVKVA-DGTFI----EEPGSGTVAIIE---DR--KVSVGTIDWLRSHGVDTST---------FQEVEMEDLMNQSLVYV 704 (932)
Q Consensus 644 ~~~~~~-~~~~~----~~~g~g~~~~i~---~~--~~~~Gs~~~i~~~~~~~~~---------~~~~~~~~~~g~~~~~v 704 (932)
...... ..... ...++++.+.++ ++ .++||+++++.+.|....+ .+..+.++.+|.+++++
T Consensus 436 ~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~v 515 (920)
T 1mhs_A 436 AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515 (920)
T ss_dssp CCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEE
T ss_pred chhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 211111 01111 124778888774 33 4779999999988754211 01223456789999999
Q ss_pred EEC-----CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 705 GVD-----NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 705 a~~-----~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
+++ .+|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||...
T Consensus 516 A~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~ 595 (920)
T 1mhs_A 516 ARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGS 595 (920)
T ss_dssp CCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGG
T ss_pred EEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHH
Confidence 975 389999999999999999999999999999999999999999999999999631
Q ss_pred ---------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH
Q 002354 762 ---------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 762 ---------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
.+|+|++|+||.++|+.||++|+.|+|+|||.||+|||++||+|||||+|++.++++||+|+++++++.|.
T Consensus 596 el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~ 675 (920)
T 1mhs_A 596 EVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAII 675 (920)
T ss_dssp GGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHH
T ss_pred HHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 833 VALELSRLTMKTVKQNLWWAFGYNIVG 859 (932)
Q Consensus 833 ~~i~~gR~~~~~i~~nl~~a~~~N~i~ 859 (932)
+++++||++++||+|++.|.++.|+..
T Consensus 676 ~ai~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 676 DALKTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999864
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-83 Score=805.44 Aligned_cols=582 Identities=21% Similarity=0.268 Sum_probs=461.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeE
Q 002354 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (932)
Q Consensus 324 ~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDg 403 (932)
.++..++++++++++...++.++++|+++.+++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||
T Consensus 133 ~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 208 (1028)
T 2zxe_A 133 DNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRD----GEKSTINAEFVVAGDLVEVKGGDRIPADL 208 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEET----TEEEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEEC----CEEEEEEHHHCCcCCEEEECCCCEeeceE
Confidence 34445666777788888899999999999999999999999999987 58999999999999999999999999999
Q ss_pred EEEeee-eEEeccccccCCCceeecCCCc----------cccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCCh
Q 002354 404 VVRAGR-STVDESSFTGEPLPVTKIPESE----------VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472 (932)
Q Consensus 404 vll~G~-~~VDES~LTGES~Pv~K~~g~~----------V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~ 472 (932)
+|++|+ +.||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|
T Consensus 209 ~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 288 (1028)
T 2zxe_A 209 RIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTP 288 (1028)
T ss_dssp EEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCH
T ss_pred EEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCc
Confidence 999996 7999999999999999999864 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhh
Q 002354 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGA 552 (932)
Q Consensus 473 lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a 552 (932)
+|+.+++++.+++++++++++++|+++++.+ .+|..++.+++++++++|||+|++++|++++.+..+++
T Consensus 289 lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----------~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ma 357 (1028)
T 2zxe_A 289 IAIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 357 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----------CcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998888888765432 24677888999999999999999999999999999999
Q ss_pred hcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCC----CCCCCCH--HHHHHHHHHh----
Q 002354 553 TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQN----PIHPLSE--TEILKFAAGV---- 622 (932)
Q Consensus 553 ~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~----~~~~~~~--~~ll~laa~~---- 622 (932)
++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+....... ..+..++ .+++..++.+
T Consensus 358 k~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 437 (1028)
T 2zxe_A 358 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAV 437 (1028)
T ss_dssp TTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCE
T ss_pred hCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999987653322111000 0011122 2444443332
Q ss_pred -c-ccCC----------CcHHHHHHHHHHhcCCccc--cccCCCeEEec---CCeeEEEE-------cC--eEEEeecHH
Q 002354 623 -E-SNTV----------HPIGKAIVEAAEFSNCQNV--KVADGTFIEEP---GSGTVAII-------ED--RKVSVGTID 676 (932)
Q Consensus 623 -e-~~s~----------hPi~~Ai~~~a~~~~~~~~--~~~~~~~~~~~---g~g~~~~i-------~~--~~~~~Gs~~ 676 (932)
+ ..++ +|.+.|++++++..+.... ........+.| .+..+..+ ++ ..++||+++
T Consensus 438 ~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e 517 (1028)
T 2zxe_A 438 FQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPE 517 (1028)
T ss_dssp ECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHH
T ss_pred eecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcH
Confidence 1 1234 4566799999876522110 00111122222 23322222 12 248899999
Q ss_pred HHhhcCCCC---------ch------hhhHHHHHhCCCeEEEEEE------------------------CCEEEEEEEec
Q 002354 677 WLRSHGVDT---------ST------FQEVEMEDLMNQSLVYVGV------------------------DNMLAGLIYVE 717 (932)
Q Consensus 677 ~i~~~~~~~---------~~------~~~~~~~~~~g~~~~~va~------------------------~~~~lG~i~l~ 717 (932)
.+.+.|... .. .+..+.+..+|.+++++++ |++|+|+++++
T Consensus 518 ~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~ 597 (1028)
T 2zxe_A 518 RILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMI 597 (1028)
T ss_dssp HHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEE
T ss_pred HHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccC
Confidence 998877421 00 0112335678999998874 45899999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------------------------
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------ 761 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------ 761 (932)
|++||+++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 99999999999999999999999999999999999999999732
Q ss_pred ---------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeC
Q 002354 762 ---------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMG 825 (932)
Q Consensus 762 ---------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~ 825 (932)
.+|+|++|++|..+|+.+|+.|+.|+|+|||.||+|||++||+||||| +|++.++++||+|+.+
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~ 757 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLD 757 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETT
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecC
Confidence 289999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccccc
Q 002354 826 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSK 905 (932)
Q Consensus 826 ~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~ 905 (932)
+++++|.+++++||++++||++|+.|.+++|+..+...+...+......++|+ ......-+..++.++.|.+ .+.
T Consensus 758 ~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~---qil~inl~~d~~pa~al~~--e~~ 832 (1028)
T 2zxe_A 758 DNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTV---TILCIDLGTDMVPAISLAY--EQA 832 (1028)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHH---HHHHHHTTTTHHHHHHGGG--CCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHH---HHHHHHHHHHHHHHHHhcc--Ccc
Confidence 99999999999999999999999999999998765433211111111223443 2233333333445555543 444
Q ss_pred cccccCCCCCCCCC-Cccccc
Q 002354 906 QKASFQAPSSRVNS-NVDSHQ 925 (932)
Q Consensus 906 ~~~~~k~~~~~~~~-~~~~~~ 925 (932)
.++++++||++.+. ..++..
T Consensus 833 ~~~~m~~~Pr~~~~~~l~~~~ 853 (1028)
T 2zxe_A 833 ESDIMKRQPRNPKTDKLVNER 853 (1028)
T ss_dssp SSCGGGSCCCCTTTCCSSCHH
T ss_pred chhhhccCCCCcccccccCHH
Confidence 56678888876444 555544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-81 Score=791.64 Aligned_cols=582 Identities=20% Similarity=0.254 Sum_probs=472.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEE
Q 002354 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (932)
Q Consensus 325 yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgv 404 (932)
++..++++++++++...+..++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+
T Consensus 139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRd----G~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ 214 (1034)
T 3ixz_A 139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRD----GDKFQINADQLVVGDLVEMKGGDRVPADIR 214 (1034)
T ss_pred chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCCCCcEEEEcCCceecCCeE
Confidence 4445667777788888889999999999999999999999999987 689999999999999999999999999999
Q ss_pred EEeee-eEEeccccccCCCceeecCC----------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChH
Q 002354 405 VRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (932)
Q Consensus 405 ll~G~-~~VDES~LTGES~Pv~K~~g----------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~l 473 (932)
|++|. +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+
T Consensus 215 ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl 294 (1034)
T 3ixz_A 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPI 294 (1034)
T ss_pred EEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcH
Confidence 99986 68999999999999999875 34899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhh
Q 002354 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGAT 553 (932)
Q Consensus 474 q~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~ 553 (932)
|+.++++..++.++++++++++|++|++.+ .+|..++..++++++++|||+|+++++++++.+..++++
T Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak 363 (1034)
T 3ixz_A 295 AIEIEHFVDIIAGLAILFGATFFIVAMCIG-----------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLAS 363 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhh
Confidence 999999999999988888888887776543 356788999999999999999999999999999999999
Q ss_pred cCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCC----CCCCC--HHHHHHHHHHhcc---
Q 002354 554 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHPLS--ETEILKFAAGVES--- 624 (932)
Q Consensus 554 ~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~----~~~~~--~~~ll~laa~~e~--- 624 (932)
+|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+........ .+..+ ..+++..++.+..
T Consensus 364 ~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~ 443 (1034)
T 3ixz_A 364 KNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAF 443 (1034)
T ss_pred CCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhcccee
Confidence 99999999999999999999999999999999999999887654433211111 01111 1233333332211
Q ss_pred -------------cCCCcHHHHHHHHHHhcCCccccc--cCCCeEEe---cCCee--EE-EEc----C--eEEEeecHHH
Q 002354 625 -------------NTVHPIGKAIVEAAEFSNCQNVKV--ADGTFIEE---PGSGT--VA-IIE----D--RKVSVGTIDW 677 (932)
Q Consensus 625 -------------~s~hPi~~Ai~~~a~~~~~~~~~~--~~~~~~~~---~g~g~--~~-~i~----~--~~~~~Gs~~~ 677 (932)
...+|.+.|++++++..+...... +.....+. ..+.. .. ... + ..++||+++.
T Consensus 444 ~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~ 523 (1034)
T 3ixz_A 444 KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPER 523 (1034)
T ss_pred ccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHH
Confidence 124789999999887654321111 11111222 22221 11 111 2 2488999999
Q ss_pred HhhcCCCCc------hh---------hhHHHHHhCCCeEEEEE------------------------ECCEEEEEEEecc
Q 002354 678 LRSHGVDTS------TF---------QEVEMEDLMNQSLVYVG------------------------VDNMLAGLIYVED 718 (932)
Q Consensus 678 i~~~~~~~~------~~---------~~~~~~~~~g~~~~~va------------------------~~~~~lG~i~l~D 718 (932)
+.+.|.... +. +....+..+|.+++.++ .|++|+|+++++|
T Consensus 524 il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~D 603 (1034)
T 3ixz_A 524 VLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMID 603 (1034)
T ss_pred HHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccC
Confidence 998885311 00 01122445677776654 3568999999999
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 761 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 761 (932)
++|++++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 9999999999999999999999999999999999999999421
Q ss_pred --------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeCC
Q 002354 762 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGN 826 (932)
Q Consensus 762 --------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~~ 826 (932)
.+++|++|++|.++++.+|+.|+.|+|+|||.||++||++||+||||| +|++.+|++||+|+.+|
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~ 763 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDD 763 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccC
Confidence 389999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhcccccccc
Q 002354 827 RLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQ 906 (932)
Q Consensus 827 ~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~ 906 (932)
+++++.+++++||++++||++++.|.+++|+..+...+.. .++| ...|+.+..++++..+...+-++.|.+. +..
T Consensus 764 ~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qiL~inl~~d~~palal~~e--~~~ 838 (1034)
T 3ixz_A 764 NFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIY--ITVS-VPLPLGCITILFIELCTDIFPSVSLAYE--KAE 838 (1034)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-hhhhHHHHHHHHHHHHHHHHHHHHhhcC--CCC
Confidence 9999999999999999999999999999999766443321 1233 2357777788888888888888887654 456
Q ss_pred ccccCCCCCCC-CCCcccccc
Q 002354 907 KASFQAPSSRV-NSNVDSHQL 926 (932)
Q Consensus 907 ~~~~k~~~~~~-~~~~~~~~~ 926 (932)
++++++||++. +....++.|
T Consensus 839 ~~~m~~~Pr~~~~~~l~~~~~ 859 (1034)
T 3ixz_A 839 SDIMHLRPRNPKRDRLVNEPL 859 (1034)
T ss_pred hhhhhCCCCCCccccccCHHH
Confidence 66788888765 566666554
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-80 Score=786.71 Aligned_cols=586 Identities=19% Similarity=0.253 Sum_probs=456.5
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCc-EEEEeCCCccCCCEEEEcCCCEEee
Q 002354 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDS-IIEVPCNSLHVGDHIVVLPGDRIPA 401 (932)
Q Consensus 323 ~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~-~~~V~~~~Lv~GDiV~v~~Ge~IPa 401 (932)
..|++. +++++++++...++.++++|+++++++|+++.|.+++|+|++ ++ +++|++++|+|||+|.|++||+|||
T Consensus 87 ~~~~~~-~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g---~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 87 TAFVEP-FVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRAD---RKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SSSHHH-HHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTT---CSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred hhHHHh-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCC---CceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 456655 445556677778888888899999999999999999999863 23 5899999999999999999999999
Q ss_pred eEEEEee---eeEEeccccccCCCceeecCC-------------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHH
Q 002354 402 DGVVRAG---RSTVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (932)
Q Consensus 402 Dgvll~G---~~~VDES~LTGES~Pv~K~~g-------------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 465 (932)
||+|+++ .+.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 9999764 469999999999999999987 589999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcH----HHHHHHHHHHHHHHhhhcchhhHH
Q 002354 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV----SLALQLSCSVLVVACPCALGLATP 541 (932)
Q Consensus 466 a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~----~~~l~~ai~vLvva~P~aL~la~p 541 (932)
++.+++|+|+.+|+++.+++++++++++++|++|....... ..+.+| ...+..++++++++|||+|++++|
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt 317 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP-----VHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVIT 317 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC-----SSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cccchHHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 99999999999999999999998888887776654211100 011122 345668899999999999999999
Q ss_pred HHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCC----------CCCCCCCCCC--
Q 002354 542 TAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD----------PNSKQNPIHP-- 609 (932)
Q Consensus 542 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~----------~~~~~~~~~~-- 609 (932)
++++.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++ .....++...
T Consensus 318 ~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 397 (995)
T 3ar4_A 318 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVL 397 (995)
T ss_dssp HHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEE
T ss_pred HHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccc
Confidence 9999999999999999999999999999999999999999999999999986431111 0000011100
Q ss_pred --------CCHHHHHHH--HHHhcc--------------cCCCcHHHHHHHHHHhcCC-ccc--c--c------------
Q 002354 610 --------LSETEILKF--AAGVES--------------NTVHPIGKAIVEAAEFSNC-QNV--K--V------------ 648 (932)
Q Consensus 610 --------~~~~~ll~l--aa~~e~--------------~s~hPi~~Ai~~~a~~~~~-~~~--~--~------------ 648 (932)
.....+..+ +.++++ ...+|.+.|++.+++..+. ... . .
T Consensus 398 ~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~ 477 (995)
T 3ar4_A 398 KNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIR 477 (995)
T ss_dssp ETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhh
Confidence 001122222 222221 1268999999998877654 100 0 0
Q ss_pred ----cCCCeEEecCCeeEEEE----c-------CeEEEeecHHHHhhcCCCCc---------h------hhhHHHH--Hh
Q 002354 649 ----ADGTFIEEPGSGTVAII----E-------DRKVSVGTIDWLRSHGVDTS---------T------FQEVEME--DL 696 (932)
Q Consensus 649 ----~~~~~~~~~g~g~~~~i----~-------~~~~~~Gs~~~i~~~~~~~~---------~------~~~~~~~--~~ 696 (932)
....+.+...+..+..+ + ...++||+++.+.+.|.... . .+..+.+ +.
T Consensus 478 ~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 557 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557 (995)
T ss_dssp HHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHST
T ss_pred hhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhh
Confidence 00012223333333222 2 24589999999998874321 0 0112234 56
Q ss_pred CCCeEEEEEE-----------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002354 697 MNQSLVYVGV-----------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 753 (932)
Q Consensus 697 ~g~~~~~va~-----------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia 753 (932)
+|.+++.+++ |++++|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|
T Consensus 558 ~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia 637 (995)
T 3ar4_A 558 DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC 637 (995)
T ss_dssp TCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred ccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH
Confidence 7999998874 45799999999999999999999999999999999999999999999
Q ss_pred HHcCCCCC-----------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe
Q 002354 754 SLVGIPKD-----------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI 804 (932)
Q Consensus 754 ~~~gi~~~-----------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v 804 (932)
+++||... .+|+|++|++|.++|+.+|++|+.|+|+|||.||++||++||+
T Consensus 638 ~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 638 RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTE
T ss_pred HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCe
Confidence 99999642 3899999999999999999999999999999999999999999
Q ss_pred eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccc--cccHHHHH
Q 002354 805 GVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGT--MLTPSIAG 881 (932)
Q Consensus 805 gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~~~g~--~l~P~~aa 881 (932)
|||||+|++.++++||+++.++++..+.+++++||++++||+||+.|++++|+..+...+ +.+ +|. .++|+
T Consensus 718 giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~---~g~~~pl~~~--- 791 (995)
T 3ar4_A 718 GIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA---LGLPEALIPV--- 791 (995)
T ss_dssp EEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCSSCHH---
T ss_pred EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcchHHHH---
Confidence 999999999999999999999999999999999999999999999999999985432221 111 231 24454
Q ss_pred HHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCccccc
Q 002354 882 ALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 925 (932)
Q Consensus 882 ~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~ 925 (932)
.+..+.-+...+.++.|.+. ++..+++++||++.+.+.++..
T Consensus 792 qil~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~~~~~~l~~~~ 833 (995)
T 3ar4_A 792 QLLWVNLVTDGLPATALGFN--PPDLDIMDRPPRSPKEPLISGW 833 (995)
T ss_dssp HHHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCCCTTCCSSCHH
T ss_pred HHHHHHHHHHHHHHHhhccC--CCChhHHhCCCCCCcccccCHH
Confidence 34444445555666666544 3345678888887777666654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-85 Score=811.31 Aligned_cols=508 Identities=23% Similarity=0.308 Sum_probs=424.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeE
Q 002354 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (932)
Q Consensus 324 ~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDg 403 (932)
.|++ +++++++++++.+++.++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||
T Consensus 92 ~~~~-~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~Rd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 166 (885)
T 3b8c_A 92 DWQD-FVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRD----GKWSEQEAAILVPGDIVSIKLGDIIPADA 166 (885)
T ss_dssp CCTT-HHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCS----SCSCCCCTTTTCTTSBCCCCSSCCCSSCC
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeece
Confidence 3444 456777788899999999999999999999999999999986 57889999999999999999999999999
Q ss_pred EEEeeee-EEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHh
Q 002354 404 VVRAGRS-TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSG 482 (932)
Q Consensus 404 vll~G~~-~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~ 482 (932)
+|++|+. .||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+|+|.+++++ +.+++|+|+.+++++.
T Consensus 167 ~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~ 245 (885)
T 3b8c_A 167 RLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGN 245 (885)
T ss_dssp CCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHH
T ss_pred EEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHH
Confidence 9999985 8999999999999999999999999999999999999999999999999998877 6789999999999988
Q ss_pred hHHHHH-HHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCc
Q 002354 483 HFTYGV-IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGG 561 (932)
Q Consensus 483 ~~~~~v-l~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~ 561 (932)
++++.+ +.+++++++.|++. +.+|..++.+++++++++|||+|++++|++++.+..+++++|+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~ 314 (885)
T 3b8c_A 246 FCICSIAIGMVIEIIVMYPIQ-----------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRM 314 (885)
T ss_dssp HHHHHHHHHHHHHSTTTTTTT-----------CSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----------cCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCc
Confidence 754433 32333333333221 224556788999999999999999999999999999999999999999
Q ss_pred hHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc-CCCcHHHHHHHHHHh
Q 002354 562 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN-TVHPIGKAIVEAAEF 640 (932)
Q Consensus 562 ~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~-s~hPi~~Ai~~~a~~ 640 (932)
+++|+||++|+||||||||||+|+|+|.+.... .+ ..++++++++.+++.++.. +.||+++|+++++..
T Consensus 315 ~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~--------~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~ 384 (885)
T 3b8c_A 315 TAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF--------CKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLAD 384 (885)
T ss_dssp GGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS--------CSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCC
T ss_pred hHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc--------CCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhc
Confidence 999999999999999999999999999743210 00 1235677888888888864 899999999988753
Q ss_pred cCC---ccccccCCCeEEecCCe-eEEE-EcCe--EEEeecHHHHhhcCCCCc-----hhhhHHHHHhCCCeEEEEEEC-
Q 002354 641 SNC---QNVKVADGTFIEEPGSG-TVAI-IEDR--KVSVGTIDWLRSHGVDTS-----TFQEVEMEDLMNQSLVYVGVD- 707 (932)
Q Consensus 641 ~~~---~~~~~~~~~~~~~~g~g-~~~~-i~~~--~~~~Gs~~~i~~~~~~~~-----~~~~~~~~~~~g~~~~~va~~- 707 (932)
... .........|.....+. +... .+++ .++||+++.+.+.|.... ..+..+.++.+|.++++++++
T Consensus 385 ~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~ 464 (885)
T 3b8c_A 385 PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQV 464 (885)
T ss_dssp TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBC
T ss_pred hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEec
Confidence 110 00001111111111111 0000 1333 477999999998875211 112234456789999999874
Q ss_pred ------------CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------
Q 002354 708 ------------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------- 761 (932)
Q Consensus 708 ------------~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------- 761 (932)
++++|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 465 ~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~ 544 (885)
T 3b8c_A 465 VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544 (885)
T ss_dssp CCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGT
T ss_pred cccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeecccccc
Confidence 589999999999999999999999999999999999999999999999999521
Q ss_pred --------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC
Q 002354 762 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827 (932)
Q Consensus 762 --------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~ 827 (932)
.+|++++|+||.++|+.+|++|+.|+|+|||.||+|||++||+|||||+|+|.++++||+|+.+++
T Consensus 545 ~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~ 624 (885)
T 3b8c_A 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 624 (885)
T ss_dssp TSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCS
T ss_pred ccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCc
Confidence 279999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 828 LSQLLVALELSRLTMKTVKQNLWWAFGYNIV 858 (932)
Q Consensus 828 ~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i 858 (932)
++.|.+++++||++++|||||+.|++++|+.
T Consensus 625 ~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~ 655 (885)
T 3b8c_A 625 LSVIISAVLTSRAIFQRMKNYTIYAVSITIR 655 (885)
T ss_dssp HHHHTHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999984
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=354.59 Aligned_cols=260 Identities=31% Similarity=0.498 Sum_probs=237.1
Q ss_pred HHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc
Q 002354 546 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 625 (932)
Q Consensus 546 ~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~ 625 (932)
.++.+++++||++|+++++|.++++++||||||||||+|+|.|.++. ++++++.+++++|..
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------------------~~~~~l~~~~~~e~~ 65 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------------------GDSLSLAYAASVEAL 65 (263)
Confidence 46788999999999999999999999999999999999999998774 235688999999999
Q ss_pred CCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEE
Q 002354 626 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVG 705 (932)
Q Consensus 626 s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va 705 (932)
|.||+++|+.++++..+... ...+.+...+|.|+...+++..+.+|+++ ++.+ ++++
T Consensus 66 s~hp~a~ai~~~~~~~g~~~--~~~~~~~~~~G~g~~~~~~~~~~~~G~~~--------------------~~~~-~~~~ 122 (263)
T 2yj3_A 66 SSHPIAKAIVKYAKEQGVKI--LEVKDFKEISGIGVRGKISDKIIEVKKAE--------------------NNND-IAVY 122 (263)
Confidence 99999999999987766542 23456788899999999988888888754 1334 6778
Q ss_pred ECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCE
Q 002354 706 VDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 706 ~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~ 785 (932)
.+..+.|.+.+.|+++|++.++|+.|+++|++++|+|||+...+..+++++|+. .+|..+.|++|...++.++..++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~p~~k~~~~~~l~~~~~~ 200 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ--EYYSNLSPEDKVRIIEKLKQNGNK 200 (263)
Confidence 889999999999999999999999999999999999999999999999999997 788999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 848 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~n 848 (932)
|+||||+.||++|++.||+|+++|++++.+++.+|++++++++..++++++++|+++++||||
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999999999999999999999999999999999999999998
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-32 Score=292.66 Aligned_cols=276 Identities=35% Similarity=0.531 Sum_probs=237.1
Q ss_pred ccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHH
Q 002354 558 LRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEA 637 (932)
Q Consensus 558 vk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~ 637 (932)
+|+++++|.+++++.|+||++||||.|+++|.++... ++ ++.+++.+++.++..+.||+..++.+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~-------------~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~ 66 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGF-------------NH-SEDELLQIAASLEARSEHPIAAAIVEE 66 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEES-------------SS-CHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEec-------------CC-CHHHHHHHHHHhhccCCCHHHHHHHHH
Confidence 5889999999999999999999999999999999886 33 678999999999999999999999999
Q ss_pred HHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEEECCEEEEEEEec
Q 002354 638 AEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVE 717 (932)
Q Consensus 638 a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~ 717 (932)
++..+... .....+...++.|+...+++..+..|+.+++.+.+.... .........+...+++..++.++|.+.+.
T Consensus 67 ~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
T 3skx_A 67 AEKRGFGL--TEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTD--ESVEKLKQQGKTVVFILKNGEVSGVIALA 142 (280)
T ss_dssp HHHTTCCC--CCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCC--TTHHHHHTTTCEEEEEEETTEEEEEEEEE
T ss_pred HHhcCCCC--CCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCch--HHHHHHHhCCCeEEEEEECCEEEEEEEec
Confidence 98877653 233567788999999999999999999999988776543 22233445678899999999999999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAA 797 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~ 797 (932)
|+++|++.++++.|++.|+++.++||++...+..+.+.+|+. .+|..+.|.+|...++.+.+.. .++||||+.||++
T Consensus 143 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~ 219 (280)
T 3skx_A 143 DRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD--DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAP 219 (280)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHH
T ss_pred CCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh--hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHH
Confidence 999999999999999999999999999999999999999997 7899999999999999998876 6799999999999
Q ss_pred HHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 798 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFG 854 (932)
Q Consensus 798 al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~ 854 (932)
|++.|++|++|+++.+..++.||+++..++++++.++++++|+++++++||+.|++.
T Consensus 220 ~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 220 ALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-32 Score=294.69 Aligned_cols=277 Identities=36% Similarity=0.520 Sum_probs=234.2
Q ss_pred HHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccC
Q 002354 547 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNT 626 (932)
Q Consensus 547 ~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s 626 (932)
+..+++++||++|+++++|.++++++||||||||||.+++.+.+++.. .+ ++++++.+++++|..+
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~-------------~~-~~~~~l~~~~~~e~~s 74 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-------------NG-DERELLRLAAIAERRS 74 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEES-------------SS-CHHHHHHHHHHHTTTC
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeC-------------CC-CHHHHHHHHHHHhhcC
Confidence 567889999999999999999999999999999999999999998876 22 5788999999999999
Q ss_pred CCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCc-hh-hhHHHHHhCCCeEEEE
Q 002354 627 VHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TF-QEVEMEDLMNQSLVYV 704 (932)
Q Consensus 627 ~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~-~~-~~~~~~~~~g~~~~~v 704 (932)
.||+++++.+.++..+... ...+.+....|.|+.. ..+.+|+++++.+.+.... .. ...+.+...+.+++++
T Consensus 75 ~hp~~~a~~~~~~~~g~~~--~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 148 (287)
T 3a1c_A 75 EHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIV 148 (287)
T ss_dssp CSHHHHHHHHHHHHTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCc--cccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhCCCeEEEE
Confidence 9999999999998877653 2335677888998876 5577798888776665431 11 1223345578899999
Q ss_pred EECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCC
Q 002354 705 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN 784 (932)
Q Consensus 705 a~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~ 784 (932)
+.|+.+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+. .+|..+.|+.|...++.++.. .
T Consensus 149 ~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~~K~~~~~~l~~~-~ 225 (287)
T 3a1c_A 149 ARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK-E 225 (287)
T ss_dssp EETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTT-C
T ss_pred EECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--eeeeecChHHHHHHHHHHhcC-C
Confidence 9999999999999999999999999999999999999999999999999999997 788899999999999999888 8
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 002354 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 846 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 846 (932)
.++||||+.||++|++.|+++++++++.+..++.+|+++.++++..+.++++.+|+++++||
T Consensus 226 ~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 226 VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998777777889999988899999999999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=219.72 Aligned_cols=111 Identities=43% Similarity=0.703 Sum_probs=106.3
Q ss_pred HHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCcc
Q 002354 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (932)
Q Consensus 353 ~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V 432 (932)
++++|+++.|..++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.+
T Consensus 2 al~~L~~l~p~~a~v~r~----g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~~v 77 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEV 77 (113)
T ss_dssp HHHHHHHHSCSEEEEEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEE
T ss_pred HHHHHhcCCCCEEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCCEE
Confidence 467788889999999986 5899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCcEEEEEEecCCcchHHHHHHHHHHhh
Q 002354 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (932)
Q Consensus 433 ~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~ 467 (932)
|+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 78 ~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 78 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999875
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-27 Score=220.99 Aligned_cols=120 Identities=38% Similarity=0.591 Sum_probs=108.4
Q ss_pred HHHhHHHHHhhhccCCCeEEEEEecCCCCc---EEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCc
Q 002354 347 KIKATSDMTGLLGILPSKARLLVDNDAKDS---IIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLP 423 (932)
Q Consensus 347 ~~ka~~~l~~L~~~~p~~~~vir~~~~~g~---~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~P 423 (932)
++|+.+++++|+++.|.+++|+|++. +++ +++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~-~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDS-DNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSS-STTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCC-CCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCcc
Confidence 46788999999999999999998632 122 68899999999999999999999999999999999999999999999
Q ss_pred eeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhh
Q 002354 424 VTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (932)
Q Consensus 424 v~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~ 467 (932)
+.|.+|+.||+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999987753
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-22 Score=216.76 Aligned_cols=120 Identities=15% Similarity=0.201 Sum_probs=107.7
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------ceecccChhh
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNE 771 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------~v~~~~~p~~ 771 (932)
.+++||++.++++.|+++|++++|+|||...+++++++++|+... ..+++..|.+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 478999999999999999999999999999999999999998642 1234456778
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHH---HHhCCeeEEec-------CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAA---LASSHIGVAMG-------GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~a---l~~A~vgIa~~-------~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|...+..++++++.|+|+|||+||+|| |+.||+||+|| ++++.+++++|+||++|++..++.+|-
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 888899999999999999999999999 55999999999 799999999999999999999998764
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-16 Score=158.78 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=116.2
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CC
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----EN 784 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~ 784 (932)
..+..+.+.|.+ +|+.|+++|+++.++||++...+..+++++|+. .+|... ..|.+.++.+.++ .+
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~--~~f~~~--~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE--HLFQGR--EDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS--EEECSC--SCHHHHHHHHHHHHTCCGG
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH--HHhcCc--CChHHHHHHHHHHcCCChh
Confidence 344445444433 999999999999999999999999999999997 677665 6677777766553 56
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVKQNLWWAFGYNI 857 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~ 857 (932)
.++||||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|.++++|+||+.|++.||-
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred HEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence 8999999999999999999999999999999999999998764 677888888999999999999999999983
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.3e-15 Score=144.41 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=100.4
Q ss_pred CCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccc-----cC
Q 002354 577 KTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKV-----AD 650 (932)
Q Consensus 577 KTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~-----~~ 650 (932)
..||+|.|+++++++.+. +++++++++++++++|..|+||+++||++++++. ++..... +.
T Consensus 13 ~~~tit~gnr~vt~v~~~-------------~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~ 79 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPA-------------QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATF 79 (156)
T ss_dssp --------CEEEEEEEEC-------------TTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEE
T ss_pred CCCceecCCCeEEEEEec-------------CCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcccccccccce
Confidence 479999999999999876 5678899999999999999999999999999987 6653222 11
Q ss_pred CCeEEecC-CeeEEEEcCeEEEeec----HHHHhhcCCCCc-hh-hhHHHHHhCCCeEEEEEECCEEEEEEEecccccH
Q 002354 651 GTFIEEPG-SGTVAIIEDRKVSVGT----IDWLRSHGVDTS-TF-QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRD 722 (932)
Q Consensus 651 ~~~~~~~g-~g~~~~i~~~~~~~Gs----~~~i~~~~~~~~-~~-~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~ 722 (932)
.+|...+| +|+ .++++.+.+|+ .+|+.+.++... .. +..+..+.+|.++++++.|++++|+|.+.|++||
T Consensus 80 ~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 80 VPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG 156 (156)
T ss_dssp EEEETTTTEEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECCCC
T ss_pred eeccccCCCCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCCCC
Confidence 45777888 898 56999999999 568887777654 22 2334456789999999999999999999999986
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.4e-14 Score=142.75 Aligned_cols=130 Identities=26% Similarity=0.386 Sum_probs=105.3
Q ss_pred CCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccccCCCeEEec
Q 002354 579 GTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEP 657 (932)
Q Consensus 579 GTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~~~~~~~~~~ 657 (932)
||||+|+|+|.++..... ...+++++++.+++++|.+|+||+++||+++++.. +... .....+|+..+
T Consensus 1 GTLT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~ 69 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTE----------SNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTET-LGTCIDFQVVP 69 (185)
T ss_dssp CCCCSCCCEEEEEEECSC----------TTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTCSC-CCCCBCCEEET
T ss_pred CCCcCCcEEEEEEEecCC----------cCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCCCC-CCCccceEEec
Confidence 899999999999986510 02357889999999999999999999999999764 4321 12346899999
Q ss_pred CCeeEEEEcC----------------------------------------------------eEEEeecHHHHhhcCCCC
Q 002354 658 GSGTVAIIED----------------------------------------------------RKVSVGTIDWLRSHGVDT 685 (932)
Q Consensus 658 g~g~~~~i~~----------------------------------------------------~~~~~Gs~~~i~~~~~~~ 685 (932)
|+|+.+++++ +++.+|+++||.++++..
T Consensus 70 G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i 149 (185)
T 2kmv_A 70 GCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVI 149 (185)
T ss_dssp TTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCC
T ss_pred cceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCC
Confidence 9999999988 689999999999988765
Q ss_pred chh--hhHHHHHhCCCeEEEEEECCEEEEEEEeccc
Q 002354 686 STF--QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR 719 (932)
Q Consensus 686 ~~~--~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~ 719 (932)
... ......+.+|.+.++++.|++++|+|.+.|+
T Consensus 150 ~~~~~~~~~~~~~~G~T~V~vaidg~l~g~iavaD~ 185 (185)
T 2kmv_A 150 NNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT 185 (185)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEEcC
Confidence 422 2223445679999999999999999999995
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.44 E-value=9.2e-14 Score=154.79 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=110.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHH----
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFIN---- 777 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~---- 777 (932)
++.|++.+.++.|++.|+++.|+||+....+..+.+++|+. .++.. ..+..|.+.++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD--YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC--eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 68899999999999999999999999999999999999996 33332 12234555444
Q ss_pred HHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 778 ELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYN 856 (932)
Q Consensus 778 ~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N 856 (932)
.+.-....++||||+.||++|++.|++|++| ++.+.+++.||+++..+++.++.++++......+++++|+.|++.||
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred HcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 4444457899999999999999999999999 89999999999999999999999999999888899999999999998
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=130.03 Aligned_cols=127 Identities=23% Similarity=0.403 Sum_probs=100.5
Q ss_pred cccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccccCCCeEEecCC
Q 002354 581 LTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEPGS 659 (932)
Q Consensus 581 LT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~~~~~~~~~~g~ 659 (932)
||+|+|+|.++..... ...++++++|.+++++|.+|+||+++||+++++.. +... .....+|+.++|+
T Consensus 1 LT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~G~ 69 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGD----------VATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTET-LGYCTDFQAVPGC 69 (165)
T ss_dssp CCCCCCCEEEEEECCC----------TTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTCCC-CCCEEEEEEETTT
T ss_pred CCCceeEEEEEEeeCC----------cCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCCCC-CCCcCceEEecCc
Confidence 8999999999876510 01256789999999999999999999999999765 4321 1123679999999
Q ss_pred eeEEEEcCe-----------------------------------EEEeecHHHHhhcCCCCchh--hhHHHHHhCCCeEE
Q 002354 660 GTVAIIEDR-----------------------------------KVSVGTIDWLRSHGVDTSTF--QEVEMEDLMNQSLV 702 (932)
Q Consensus 660 g~~~~i~~~-----------------------------------~~~~Gs~~~i~~~~~~~~~~--~~~~~~~~~g~~~~ 702 (932)
|+.+.+++. .|.+|+++||.++++..... ......+.+|.+++
T Consensus 70 Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v 149 (165)
T 2arf_A 70 GIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAI 149 (165)
T ss_dssp EEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEE
T ss_pred cEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEE
Confidence 999999886 89999999999877654321 12223445788999
Q ss_pred EEEECCEEEEEEEecc
Q 002354 703 YVGVDNMLAGLIYVED 718 (932)
Q Consensus 703 ~va~~~~~lG~i~l~D 718 (932)
|+++|++++|+|.+.|
T Consensus 150 ~va~dg~~~g~i~l~D 165 (165)
T 2arf_A 150 LVAIDGVLCGMIAIAD 165 (165)
T ss_dssp EEEETTEEEEEEEECC
T ss_pred EEEECCEEEEEEEEEC
Confidence 9999999999999987
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.5e-13 Score=133.74 Aligned_cols=153 Identities=16% Similarity=0.115 Sum_probs=119.8
Q ss_pred CeEEEEEECCEEEE-EEEec------ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhh
Q 002354 699 QSLVYVGVDNMLAG-LIYVE------DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771 (932)
Q Consensus 699 ~~~~~va~~~~~lG-~i~l~------D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~ 771 (932)
...+++..|++++- -..+. ..+.+++.++|++|+++|++++++||++...+..+++++|+. .++.... .
T Consensus 8 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~~~k--~ 83 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--E 83 (180)
T ss_dssp CCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--C
T ss_pred CeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeecCCC--C
Confidence 45677777776542 11221 146778899999999999999999999999999999999997 5665544 4
Q ss_pred HHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH---HHHHHHH
Q 002354 772 KKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE---LSRLTMK 843 (932)
Q Consensus 772 K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~---~gR~~~~ 843 (932)
|...++.+.+ ..+.++||||+.||++|++.|+++++++++.+.+++.||+++.+++..++. ++++ ..|..++
T Consensus 84 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~ 163 (180)
T 1k1e_A 84 KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSS 163 (180)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTH
T ss_pred cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchh
Confidence 5555554433 236799999999999999999999999999999999999999988766666 4443 4666788
Q ss_pred HHHHHHHHHHHH
Q 002354 844 TVKQNLWWAFGY 855 (932)
Q Consensus 844 ~i~~nl~~a~~~ 855 (932)
+++.++.|+..-
T Consensus 164 ~~~~~~~~~~~~ 175 (180)
T 1k1e_A 164 VFDTAQGFLKSV 175 (180)
T ss_dssp HHHCHHHHHHHG
T ss_pred hhhhccchhhhh
Confidence 888888887764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-12 Score=132.13 Aligned_cols=153 Identities=15% Similarity=0.147 Sum_probs=117.1
Q ss_pred CCCeEEEEEECCEEEEEEEecccccHHHHH-------HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccC-
Q 002354 697 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAH-------VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK- 768 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~i~l~D~lr~~~~~-------~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~- 768 (932)
.+.+.+++..|+++..-....++..++..+ +|+.|+++|+++.++||++...+..+++.+|++ .++....
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~--~~~~~~kp 94 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT--HYYKGQVD 94 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC--EEECSCSS
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc--cceeCCCC
Confidence 356778888888765411111111122222 599999999999999999999999999999997 6777663
Q ss_pred -hhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhH----HHHHHHHHHHHHH
Q 002354 769 -PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ----LLVALELSRLTMK 843 (932)
Q Consensus 769 -p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~~gR~~~~ 843 (932)
|+-...+++.+.-....++||||+.||++|++.|+++++++++.+.+++.||+++.+++..+ +.+.+...|..+.
T Consensus 95 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~ 174 (191)
T 3n1u_A 95 KRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAE 174 (191)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHH
Confidence 44445566666656678999999999999999999999999999999999999999887444 5556666777777
Q ss_pred HHHHHHHH
Q 002354 844 TVKQNLWW 851 (932)
Q Consensus 844 ~i~~nl~~ 851 (932)
++.+++..
T Consensus 175 ~~~~~~~~ 182 (191)
T 3n1u_A 175 LAITGYLK 182 (191)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77776654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-12 Score=133.38 Aligned_cols=131 Identities=15% Similarity=0.212 Sum_probs=103.1
Q ss_pred CCCeEEEEEECCEEEEEEEecccccHHHHH-------HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh
Q 002354 697 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAH-------VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~i~l~D~lr~~~~~-------~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p 769 (932)
.+.+.+++..|++++.--...++.+++..+ .|+.|+++|+++.++||++...+..+++++|+. .+|....
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~~~k- 99 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQGQD- 99 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEECSCS-
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEeeCCC-
Confidence 456788888888766411111222233333 499999999999999999999999999999997 6776664
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 770 NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 770 ~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
.|...++.+.+ ....++||||+.||++|++.|+++++|+++.+.+++.||+|+.+++-.++
T Consensus 100 -~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 100 -DKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp -SHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTH
T ss_pred -CcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCH
Confidence 45555554433 35689999999999999999999999999999999999999998876664
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=6.3e-12 Score=107.05 Aligned_cols=70 Identities=29% Similarity=0.350 Sum_probs=64.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+.+|.|+||+|++|+.+||++|++++||.+++||+.++++.|.|++...+. +.+.++|+++||++.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKE--------EDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEEcc
Confidence 4678999999999999999999999999999999999999999999877665 789999999999987654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.7e-12 Score=127.13 Aligned_cols=115 Identities=15% Similarity=0.106 Sum_probs=93.2
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCCCceecccChhhHHHHHHHHhhC----
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS--LVGIPKDKVLSGVKPNEKKRFINELQND---- 782 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~--~~gi~~~~v~~~~~p~~K~~~v~~l~~~---- 782 (932)
+.++.+.++|. .+|+.|+++|+++.|+||+ ..+..+++ .+|++ ++.. +++|...++.+.++
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~~g--~~~K~~~l~~~~~~~gi~ 98 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TEVS--VSDKLATVDEWRKEMGLC 98 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EECS--CSCHHHHHHHHHHHTTCC
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EEEC--CCChHHHHHHHHHHcCcC
Confidence 34555666665 3899999999999999999 67888899 67774 4543 46788888777653
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHH-HHHHH
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL-LVALE 836 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i-~~~i~ 836 (932)
...++||||+.||++|++.|+++++|+++.+.+++.||+|+.+++-+++ .++++
T Consensus 99 ~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~ 153 (168)
T 3ewi_A 99 WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIREFAE 153 (168)
T ss_dssp GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHH
T ss_pred hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHH
Confidence 4579999999999999999999999999999999999999998877773 33443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.27 E-value=6.9e-12 Score=131.69 Aligned_cols=134 Identities=17% Similarity=0.181 Sum_probs=111.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------cee-
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVL- 764 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------~v~- 764 (932)
..+++..|++++. -...+.+++.++|++|+++|++++++|||+...+..+++++|++.. .+.
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 4677777887764 2567899999999999999999999999999999999999998631 111
Q ss_pred c--------------------------------------------------------------ccCh--hhHHHHHHHHh
Q 002354 765 S--------------------------------------------------------------GVKP--NEKKRFINELQ 780 (932)
Q Consensus 765 ~--------------------------------------------------------------~~~p--~~K~~~v~~l~ 780 (932)
. ++.| .+|...++.+.
T Consensus 83 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 83 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp SSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 0 0113 46777777776
Q ss_pred hC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 781 ND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 781 ~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++ ...++++||+.||.+|++.|++|++|+++.+.+++.||+++.+++.++|.++++
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 53 357999999999999999999999999999999999999999999999999876
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.25 E-value=1e-11 Score=125.00 Aligned_cols=103 Identities=20% Similarity=0.254 Sum_probs=89.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+++.+|++ ++... ..|.+.++.+.++ .+.++||||+.||++|++.|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 899999999999999999999999999999996 66655 5566666665543 46799999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
+++++++++.+.+++.||+++.+++..++...
T Consensus 122 g~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 122 GWPVAVASAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp SEEEECTTCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred CCeEECCChhHHHHHhCCEEecCCCCCcHHHH
Confidence 99999999999999999999998886655443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-11 Score=127.04 Aligned_cols=106 Identities=21% Similarity=0.207 Sum_probs=91.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+++++|+. .+|... ..|.+.++.+.++ .+.++||||+.||++|++.|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~--~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~a 159 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT--HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQV 159 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence 999999999999999999999999999999997 677766 5677777766553 67899999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALE 836 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~ 836 (932)
+++++++++.+.+++.||+|+.+++-.+ +.++++
T Consensus 160 g~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~ 194 (211)
T 3ij5_A 160 GLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCD 194 (211)
T ss_dssp SEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHH
Confidence 9999999999999999999998875544 444443
|
| >4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.2e-11 Score=101.04 Aligned_cols=67 Identities=28% Similarity=0.511 Sum_probs=60.5
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
++++|.|+||+|++|+.+|+++|++++||.+++||+.++++.|.| +...++ +.+.++|+++||++.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~--------~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTP--------QILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCH--------HHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCH--------HHHHHHHHHcCCceEe
Confidence 357899999999999999999999999999999999999999999 455555 7899999999998753
|
| >3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.2e-11 Score=100.81 Aligned_cols=67 Identities=24% Similarity=0.468 Sum_probs=61.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+.+|.|+||+|++|+.+||++|++ +||..++||+.++++.|.++ ++ +.+.++|+++||++.+..+
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~--------~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DV--------DKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GH--------HHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CH--------HHHHHHHHHcCCceEecCc
Confidence 56789999999999999999999999 99999999999999999988 33 7899999999999877653
|
| >3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-10 Score=97.55 Aligned_cols=65 Identities=26% Similarity=0.409 Sum_probs=58.0
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+.+|.| ||+|++|+.+||++|++++|| +++||+.++++.|.++. ++ +++.++|+++||++.+..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~---~~--------~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH---SM--------DTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS---CH--------HHHHHHHHTTCSCEEEEE
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCceEecC
Confidence 4678999 999999999999999999999 99999999999999742 33 789999999999987653
|
| >1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-10 Score=95.31 Aligned_cols=68 Identities=29% Similarity=0.482 Sum_probs=61.7
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV--------QKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH--------HHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeEe
Confidence 4578999999999999999999999999999999999999999999876665 7899999999998754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-10 Score=111.31 Aligned_cols=106 Identities=22% Similarity=0.193 Sum_probs=89.9
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHH----HhhCCCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE----LQNDENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~----l~~~g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+.+++|+. .++....| |...++. +.-..+.++||||+.||++|++.|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~~~~~kp--k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD--YLFQGVVD--KLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS--EEECSCSC--HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC--EeecccCC--hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 66666544 4444443 333456899999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALE 836 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~ 836 (932)
+++++++++.+..++.||+++.+++..+ +.++++
T Consensus 115 g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 115 GIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp SEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred CCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 9999999999999999999999988776 655554
|
| >2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.1e-10 Score=94.23 Aligned_cols=67 Identities=21% Similarity=0.379 Sum_probs=60.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
+.+..|.|+||+|++|+..|+++|++++||..+++|+.++++.|.|++...+. +.+.++++++||++
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTL--------KDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCH--------HHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999999766655 78999999999975
|
| >1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=96.94 Aligned_cols=70 Identities=20% Similarity=0.396 Sum_probs=62.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..+..|.|+||+|++|++.|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHCCCEEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEec
Confidence 45688999999999999999999999999999999999999999999866554 78999999999987543
|
| >2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.8e-10 Score=99.48 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhc---Ccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSSLR 202 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~~~ 202 (932)
.++.|.|+||+|++|+++|+++|++++||.+++||+.++++.|.|++...+. +.+.++++++ ||++.+.
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~--------~~i~~~i~~~g~Ggy~~~~~ 74 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTP--------ESLRKAIEAVSPGLYRVSIT 74 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCT--------HHHHHHHHTTSTTTCEEECC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHhccCCCeEEEEe
Confidence 3578999999999999999999999999999999999999999999876665 7899999999 5998776
Q ss_pred cCC
Q 002354 203 DMG 205 (932)
Q Consensus 203 ~~~ 205 (932)
.+.
T Consensus 75 ~~~ 77 (90)
T 2g9o_A 75 SEV 77 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 553
|
| >3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.6e-10 Score=95.18 Aligned_cols=68 Identities=21% Similarity=0.402 Sum_probs=61.8
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
++.|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEee
Confidence 568999999999999999999999999999999999999999999876655 78999999999987654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.8e-10 Score=121.62 Aligned_cols=136 Identities=20% Similarity=0.251 Sum_probs=104.2
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC---CC--------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---KD-------------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~---~~-------------- 761 (932)
...+++..||+++- -...+.+.+.++|+++++.|++++++||++...+..+.+++|++ ..
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~ 81 (279)
T 4dw8_A 5 YKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWES 81 (279)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTT
T ss_pred ceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCC
Confidence 35677778888762 34578899999999999999999999999999999999999962 10
Q ss_pred ----------------------------cee------cc--------------------------------------cCh
Q 002354 762 ----------------------------KVL------SG--------------------------------------VKP 769 (932)
Q Consensus 762 ----------------------------~v~------~~--------------------------------------~~p 769 (932)
.++ .. ..+
T Consensus 82 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 4dw8_A 82 KEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDA 161 (279)
T ss_dssp CCEEEECCCCGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCH
T ss_pred CeEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCH
Confidence 000 00 011
Q ss_pred hhHHHHHHHHh----------------------------------h----CCCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 NEKKRFINELQ----------------------------------N----DENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~~K~~~v~~l~----------------------------------~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+...++.+.++ + ....+++|||+.||.+|++.|++|+||||+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na 241 (279)
T 4dw8_A 162 GKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNA 241 (279)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCC
Confidence 11111222221 1 123599999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
.+.+++.||+|+.+++-++|.++|+.
T Consensus 242 ~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 242 QEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred cHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 99999999999999999999999874
|
| >1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.7e-10 Score=97.38 Aligned_cols=71 Identities=25% Similarity=0.363 Sum_probs=63.4
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
+.+..|.|+||+|++|+..|+++|.+++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQP--------PMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCH--------HHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEECC
Confidence 45678999999999999999999999999999999999999999998766554 778999999999876544
|
| >1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A | Back alignment and structure |
|---|
Probab=99.03 E-value=5.3e-10 Score=97.56 Aligned_cols=71 Identities=21% Similarity=0.402 Sum_probs=63.7
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+.+||++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+..+
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------EEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEECSCC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEecCC
Confidence 4688999999999999999999999999999999999999999998866555 7899999999998766543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-10 Score=122.07 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=104.6
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------- 761 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------- 761 (932)
......+++..||+++- =...+.+.+.++|++|+++|++++++||++...+..+.+++|++..
T Consensus 18 ~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~ 94 (285)
T 3pgv_A 18 QGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDG 94 (285)
T ss_dssp ---CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTS
T ss_pred cCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCC
Confidence 34567889999999874 3457899999999999999999999999999999999999987420
Q ss_pred -----------------c-----------eecc-------------------------------------------cChh
Q 002354 762 -----------------K-----------VLSG-------------------------------------------VKPN 770 (932)
Q Consensus 762 -----------------~-----------v~~~-------------------------------------------~~p~ 770 (932)
. ++.. ..++
T Consensus 95 ~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~ 174 (285)
T 3pgv_A 95 QQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHE 174 (285)
T ss_dssp CEEEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHH
T ss_pred CEEEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHH
Confidence 0 0000 0111
Q ss_pred hHHHHHHHHh----------------------------------h-C---CCEEEEEcCCcccHHHHHhCCeeEEecCch
Q 002354 771 EKKRFINELQ----------------------------------N-D---ENVVAMVGDGINDAAALASSHIGVAMGGGV 812 (932)
Q Consensus 771 ~K~~~v~~l~----------------------------------~-~---g~~v~~vGDg~ND~~al~~A~vgIa~~~~~ 812 (932)
...++.+.++ + . .+.+++|||+.||.+|++.|++||||+|+.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~ 254 (285)
T 3pgv_A 175 HLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAH 254 (285)
T ss_dssp HHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCC
Confidence 1112222221 1 1 246999999999999999999999999999
Q ss_pred HHHHhhcC--EEEeCCChhHHHHHHH
Q 002354 813 GAASEVAS--VVLMGNRLSQLLVALE 836 (932)
Q Consensus 813 ~~a~~~ad--~vl~~~~~~~i~~~i~ 836 (932)
+.+|+.|| .|+.+++-++|.++|+
T Consensus 255 ~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 255 QRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp HHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred HHHHHhCCCCEecccCCcchHHHHHH
Confidence 99999998 4777899999999886
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.03 E-value=7.5e-10 Score=119.99 Aligned_cols=136 Identities=17% Similarity=0.244 Sum_probs=106.4
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------- 761 (932)
...+++..||+++- -...+.+.+.++++++++.|++++++||++...+..+.+.+|++..
T Consensus 6 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 82 (290)
T 3dnp_A 6 KQLLALNIDGALLR---SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPF 82 (290)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCS
T ss_pred ceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEE
Confidence 35677778888763 2457899999999999999999999999999999999999997510
Q ss_pred ------------------------------ceec-cc-------------------------------------------
Q 002354 762 ------------------------------KVLS-GV------------------------------------------- 767 (932)
Q Consensus 762 ------------------------------~v~~-~~------------------------------------------- 767 (932)
..+. +.
T Consensus 83 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 162 (290)
T 3dnp_A 83 FEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIE 162 (290)
T ss_dssp EECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEE
T ss_pred EecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEE
Confidence 0000 00
Q ss_pred ---Chh---------------------------------hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 768 ---KPN---------------------------------EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 768 ---~p~---------------------------------~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
.++ .|...++.+.++ ...+++|||+.||.+|++.|++|+|
T Consensus 163 ~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va 242 (290)
T 3dnp_A 163 VYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVA 242 (290)
T ss_dssp EECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEE
Confidence 111 133333333221 2469999999999999999999999
Q ss_pred ecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 808 MGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 808 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|+|+.+.+++.||+|+.+++-++|.++|+.
T Consensus 243 m~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 243 MGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred ecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 999999999999999999999999999873
|
| >1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.3e-10 Score=94.26 Aligned_cols=67 Identities=25% Similarity=0.478 Sum_probs=60.7
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP--------ETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCH--------HHHHHHHHHCCCCcEe
Confidence 568999999999999999999999999999999999999999999766554 7889999999998653
|
| >1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=6.9e-10 Score=91.77 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=59.1
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.+.++++||++.
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA--------TEICQAINELGYQAE 66 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHTTSSCEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 36899999999999999999999999999999999999999999866655 789999999999764
|
| >2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.8e-10 Score=92.67 Aligned_cols=67 Identities=28% Similarity=0.523 Sum_probs=58.3
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++. .+. +.+.++++++||++.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTP--------QILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHcCCCcee
Confidence 357899999999999999999999999999999999999999999865 454 7889999999998643
|
| >2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=90.47 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=59.4
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
...|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.+.++++||++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV--------KDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCc
Confidence 467999999999999999999999999999999999999999999866655 77899999999975
|
| >2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.2e-10 Score=92.64 Aligned_cols=64 Identities=39% Similarity=0.541 Sum_probs=58.4
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++. .+. +.+.++++++||++.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSP--------DALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCH--------HHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHCCCceEe
Confidence 588999999999999999999999999999999999999999876 344 7899999999998754
|
| >1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A | Back alignment and structure |
|---|
Probab=99.00 E-value=9.6e-10 Score=92.82 Aligned_cols=67 Identities=21% Similarity=0.300 Sum_probs=60.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+.+..|.|+||+|++|+..|+++|++++||.+++||+.++++.|.|++. . . +.+.++++++||++.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~-~-~--------~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND-I-R--------AQVESALQKAGYSLRD 68 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC-C-H--------HHHHHHHHHHTCEEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC-C-H--------HHHHHHHHHcCCcccc
Confidence 3467899999999999999999999999999999999999999999874 2 3 6789999999998764
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=118.21 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=103.7
Q ss_pred hCCCeEEEEEECCEEEEEEEecc-cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVED-RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------------- 760 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D-~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-------------- 760 (932)
......+++..||+++- -.. .+.+.+.++|++|+++|++++++||++...+..+.+++|.+.
T Consensus 18 ~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~ 94 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPK 94 (283)
T ss_dssp -CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSS
T ss_pred ccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECC
Confidence 44567888888998751 223 688999999999999999999999999998888777666421
Q ss_pred C---------------------c-------------eecc--------------------------c------------C
Q 002354 761 D---------------------K-------------VLSG--------------------------V------------K 768 (932)
Q Consensus 761 ~---------------------~-------------v~~~--------------------------~------------~ 768 (932)
. . ++.. + .
T Consensus 95 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~ 174 (283)
T 3dao_A 95 EILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHP 174 (283)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECS
T ss_pred EEEEEecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcC
Confidence 0 0 0000 0 0
Q ss_pred hh----------------------------------hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecC
Q 002354 769 PN----------------------------------EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGG 810 (932)
Q Consensus 769 p~----------------------------------~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~ 810 (932)
++ .|...++.+.+. ...|++|||+.||.+|++.|++||||+|
T Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~n 254 (283)
T 3dao_A 175 DKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSN 254 (283)
T ss_dssp SCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETT
T ss_pred hHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCC
Confidence 11 122223332221 2459999999999999999999999999
Q ss_pred chHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 811 GVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 811 ~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+.+.+|+.||+|+.+++-++|.++|+
T Consensus 255 a~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 255 ARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp SCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CCHHHHHhcCeECCCCCCChHHHHHH
Confidence 99999999999999999999999886
|
| >1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.99 E-value=9.3e-10 Score=90.39 Aligned_cols=64 Identities=17% Similarity=0.287 Sum_probs=58.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++.. +. +.+.++++++||++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~--------~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQ--------DLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CH--------HHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CH--------HHHHHHHHHcCCCc
Confidence 357899999999999999999999999999999999999999998764 44 78999999999975
|
| >2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=90.71 Aligned_cols=67 Identities=28% Similarity=0.431 Sum_probs=60.5
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
.+..|.|+||+|++|+..|+++|++++||..+++|+.++++.|.|++...+. +.+.++++++||++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSE--------ITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCT--------HHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 4567999999999999999999999999999999999999999999766555 778999999999763
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=7e-10 Score=119.51 Aligned_cols=135 Identities=21% Similarity=0.320 Sum_probs=86.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------------ 760 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------------ 760 (932)
...+++..||+++- -...+.+.+.+++++|++.|++++++||++...+..+.+++|++.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~ 81 (279)
T 3mpo_A 5 IKLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISG 81 (279)
T ss_dssp CCEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTS
T ss_pred eEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCC
Confidence 35677788888874 245688999999999999999999999999999999999998752
Q ss_pred Cceecc-c----------------------------------------------------------------------Ch
Q 002354 761 DKVLSG-V----------------------------------------------------------------------KP 769 (932)
Q Consensus 761 ~~v~~~-~----------------------------------------------------------------------~p 769 (932)
..++.. + .+
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 3mpo_A 82 KVLTNHSLTYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYP 161 (279)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCH
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCH
Confidence 000000 0 00
Q ss_pred hh----------------------------------HHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 NE----------------------------------KKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~~----------------------------------K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+. |...++.+.+. ...+++|||+.||.+|++.|++|+||+|+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na 241 (279)
T 3mpo_A 162 QVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNA 241 (279)
T ss_dssp HHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCC
Confidence 10 22222222221 24599999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+.+|+.||+|+.+++-++|.++|+
T Consensus 242 ~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 242 IDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHCSCBC------CHHHHHC
T ss_pred CHHHHHhcceeccCCCccHHHHHHH
Confidence 9999999999999999999999876
|
| >1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A | Back alignment and structure |
|---|
Probab=98.97 E-value=9.4e-10 Score=92.96 Aligned_cols=68 Identities=28% Similarity=0.375 Sum_probs=60.9
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|+++|.+++||.++++|+.++++.|.|++...+. +.+.++++++||++.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGP--------RDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHH--------HHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcee
Confidence 3578999999999999999999999999999999999999999998766554 6789999999998654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.2e-09 Score=108.98 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=103.5
Q ss_pred CCCeEEEEEECCEEE-EEEEecc------cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh
Q 002354 697 MNQSLVYVGVDNMLA-GLIYVED------RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769 (932)
Q Consensus 697 ~g~~~~~va~~~~~l-G~i~l~D------~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p 769 (932)
...+.+++..|+++. +-..+.. ........+++.|+++|++++++||++...+..+.+++|++ .++....|
T Consensus 24 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~~~kp 101 (188)
T 2r8e_A 24 ENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQGQSN 101 (188)
T ss_dssp HTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSCSC
T ss_pred hcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeecCCCC
Confidence 356778888888765 2222211 12223345899999999999999999999999999999997 56665444
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH
Q 002354 770 NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 836 (932)
|...++.+.+ ..+.++||||+.||.++++.|+++++++++.+.+++.||+++.+.+..++. ++++
T Consensus 102 --k~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 102 --KLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred --CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4445544433 236799999999999999999999999988888888999999987666666 6665
|
| >1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=91.60 Aligned_cols=69 Identities=32% Similarity=0.503 Sum_probs=61.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
..+..|.|+||+|++|+..|++.|.+++||.++++|+.++++.|.|++...+. +.+.+.++++||++.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceec
Confidence 45678999999999999999999999999999999999999999998766555 7789999999998654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-09 Score=125.10 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=106.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~~ 781 (932)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|++ .+++.. .++.|.++++.+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD--YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc--ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 78999999999999999999999999999999999999996 444321 25677777766544
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002354 782 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 844 (932)
Q Consensus 782 ~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 844 (932)
+ .+.++||||+.||.+|++.|++|+++ ++.+..++.||+++..+++.++..++.++|.-+..
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 3 35799999999999999999999999 78899999999999999999999999988776544
|
| >1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=91.19 Aligned_cols=67 Identities=24% Similarity=0.484 Sum_probs=60.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|+ ...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~--------~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTA--------DSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCH--------HHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCH--------HHHHHHHHHCCCceEEc
Confidence 467999999999999999999999999999999999999999998 55554 78999999999987543
|
| >1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-09 Score=92.76 Aligned_cols=70 Identities=29% Similarity=0.465 Sum_probs=62.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCH--------HHHHHHHHHHTSEEEECC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCeEEecC
Confidence 4578999999999999999999999999999999999999999998766554 678899999999876543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.4e-09 Score=111.93 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=97.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHh
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQ 780 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~ 780 (932)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .++... ....|.+.++.+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD--AAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc--hhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 358899999999999999999999999999999999999996 333221 2455666666554
Q ss_pred h----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 781 N----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 781 ~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
+ ....++||||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++++-
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 3 346799999999999999999999999 88899999999999999999998877653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.3e-09 Score=103.08 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=93.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhH--HHHHHHHhhCCCEEEEEcCCcccH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK--KRFINELQNDENVVAMVGDGINDA 796 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K--~~~v~~l~~~g~~v~~vGDg~ND~ 796 (932)
.+.+++.++++.|+++|++++++||++...+..+.+++|+. .++....|... ..+++.+.-..+.++||||+.||.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDI 113 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 45688999999999999999999999999999999999997 56655444221 223333333456799999999999
Q ss_pred HHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH
Q 002354 797 AALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE 836 (932)
Q Consensus 797 ~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 836 (932)
++.+.|++++++.++.+..++.||+++.+.+..++. ++++
T Consensus 114 ~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 114 EVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 999999999999888888899999999988777766 4444
|
| >2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.9e-09 Score=93.26 Aligned_cols=72 Identities=25% Similarity=0.219 Sum_probs=64.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+..|.|+||+|++|+..|+++|.+++||..++||+.++++.|.|++...+. +.+.++++++||.+.+...
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP--------FQIAKALNEARLEANVRVN 86 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEecC
Confidence 55788999999999999999999999999999999999999999998765554 7789999999998766544
|
| >1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.9e-09 Score=89.36 Aligned_cols=64 Identities=20% Similarity=0.382 Sum_probs=57.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCC-CeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQP-QVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~-GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+ |+|++|+.+||++|++++ ||.+++||+.++++.|.++ .++ +.+.++++++||++.+
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPY--------DFILEKIKKTGKEVRS 69 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTSSCEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCCcee
Confidence 46789999 999999999999999999 9999999999999999973 333 7899999999998754
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.2e-09 Score=109.49 Aligned_cols=113 Identities=19% Similarity=0.301 Sum_probs=91.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 781 (932)
++.++++++++.|++.|+++.++||+....+..+.+.+|+. .++.. ..+..|.+.+..+.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--eEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 56789999999999999999999999999889999999986 22211 123567666665543
Q ss_pred ----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHH
Q 002354 782 ----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 782 ----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
..+.+++|||+.||++|++.|+++++|+ +.+..++.||+++.++++..+..+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence 2356999999999999999999999998 667788899999988778877543
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3e-09 Score=103.53 Aligned_cols=71 Identities=28% Similarity=0.449 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++++++||++.+..+
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCCeEEcCc
Confidence 4678999999999999999999999999999999999999999999877665 7899999999999876544
|
| >2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=88.81 Aligned_cols=61 Identities=31% Similarity=0.511 Sum_probs=54.3
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
.|.|+||+|++|+.+|+++|++++||.++++|+.++++.| +. ..+. +.+.++++++||++.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~~-~~~~--------~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--EG-TADP--------KALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--CS-CCCH--------HHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--CC-CCCH--------HHHHHHHHHcCCCcE
Confidence 5889999999999999999999999999999999999999 33 3444 789999999999864
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=3.4e-09 Score=102.72 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=62.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++++++||++.+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGP--------RDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCH--------HHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHhCCCceEe
Confidence 3578999999999999999999999999999999999999999999876665 7899999999998754
|
| >2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.86 E-value=2.8e-09 Score=93.54 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=57.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
..+..|.|+||+|++|+..||++|++++||.+++||+.++++.|.++ .++ +.|.++|+++||++
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDA--------AHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCH--------HHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999874 333 78999999999975
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.2e-09 Score=115.22 Aligned_cols=53 Identities=23% Similarity=0.234 Sum_probs=50.6
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..+++|||+.||.+|++.|++||||+|+.+.+|+.||+|+.+++-++|.++|+
T Consensus 245 ~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 245 DHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp GGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 45999999999999999999999999999999999999999999999999987
|
| >2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A | Back alignment and structure |
|---|
Probab=98.85 E-value=3.6e-09 Score=86.18 Aligned_cols=61 Identities=23% Similarity=0.431 Sum_probs=54.6
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.++ .+. +.+.++++++||++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGE--------EQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS---SCH--------HHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999999999842 233 67999999999975
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=109.62 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=51.7
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
...++++||+.||.+|++.|++|++||++.+.+++.||+|+.+++-++|.++++.
T Consensus 216 ~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 216 QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 4569999999999999999999999999999999999999999999999998863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.8e-08 Score=107.28 Aligned_cols=134 Identities=25% Similarity=0.327 Sum_probs=101.5
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..||+++- -+..+.+.+.+++++++++|++++++||++...+..+.++++++.-
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~ 80 (258)
T 2pq0_A 4 KIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQ 80 (258)
T ss_dssp CEEEECTBTTTBC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEEC
T ss_pred eEEEEeCCCCCcC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEe
Confidence 3566666777653 2356889999999999999999999999999999999998876310
Q ss_pred ---------------------------ceeccc-C-h-----------------------------------hh------
Q 002354 762 ---------------------------KVLSGV-K-P-----------------------------------NE------ 771 (932)
Q Consensus 762 ---------------------------~v~~~~-~-p-----------------------------------~~------ 771 (932)
.++... . + +.
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 160 (258)
T 2pq0_A 81 PLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVR 160 (258)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHH
Confidence 101100 0 0 00
Q ss_pred -----------------------HHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEe
Q 002354 772 -----------------------KKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 772 -----------------------K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~ 824 (932)
|..-++.+.+ ....++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.
T Consensus 161 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~ 240 (258)
T 2pq0_A 161 NYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTK 240 (258)
T ss_dssp HCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEEC
T ss_pred hCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeC
Confidence 1111232222 2356999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHH
Q 002354 825 GNRLSQLLVALE 836 (932)
Q Consensus 825 ~~~~~~i~~~i~ 836 (932)
+++-++|.++++
T Consensus 241 ~~~~dGva~~i~ 252 (258)
T 2pq0_A 241 PVDKEGIWYGLK 252 (258)
T ss_dssp CGGGTHHHHHHH
T ss_pred CCCcchHHHHHH
Confidence 999999999886
|
| >2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.8e-08 Score=90.89 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=60.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
..++.|.|+ |+|++|+.+||++|++++||.+++||+.++++.|.++ .++ +.|.++|+++||++.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPS--------QEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCceEEccC
Confidence 456789999 9999999999999999999999999999999999984 233 7899999999999876544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=9.3e-09 Score=109.97 Aligned_cols=54 Identities=35% Similarity=0.374 Sum_probs=51.3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
..++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-++|.++++.
T Consensus 211 ~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 211 SEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred HHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999863
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=113.30 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=90.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccC------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK------------------------------ 768 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~------------------------------ 768 (932)
.+++++.++++.|++ |+.+.++|++....+..+.+.+++.. .+++...
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG-ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS-EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh-hhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 99999999998777777888888731 2222100
Q ss_pred ------------------------hhhHHHHHHHHhhCC--CEEEEEcCCcccHHHHHhC----CeeEEecCchHHHHhh
Q 002354 769 ------------------------PNEKKRFINELQNDE--NVVAMVGDGINDAAALASS----HIGVAMGGGVGAASEV 818 (932)
Q Consensus 769 ------------------------p~~K~~~v~~l~~~g--~~v~~vGDg~ND~~al~~A----~vgIa~~~~~~~a~~~ 818 (932)
+.+|...++.+..+. +.|+++||+.||++|++.| ++|||| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 112444444443322 3499999999999999999 999999 999999999
Q ss_pred cCEEEeCCChhHHHHHHHH
Q 002354 819 ASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 819 ad~vl~~~~~~~i~~~i~~ 837 (932)
||+|+.+++.++|.++++.
T Consensus 260 Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHHH
Confidence 9999999999888887663
|
| >2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.6e-09 Score=86.55 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=55.6
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..|.|+||+|++|+..|+++|+++ ||.++++|+.++++.|.+++. +.+.++++++||++.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~------------~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL------------DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH------------HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH------------HHHHHHHHHcCCceeeE
Confidence 579999999999999999999999 999999999999999998753 25888999999987643
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-08 Score=105.41 Aligned_cols=135 Identities=21% Similarity=0.192 Sum_probs=104.7
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCc-------eec-------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK-------VLS------- 765 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------v~~------- 765 (932)
..+++..||+++. -...+.+.+.+++++|+++|++++++||++...+..+.+.+|++... ++.
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (231)
T 1wr8_A 4 KAISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 80 (231)
T ss_dssp CEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred eEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEe
Confidence 4567777888764 24568899999999999999999999999999999999999875310 000
Q ss_pred ------------------cc--------------------C---------------------------h--hhHHHHHHH
Q 002354 766 ------------------GV--------------------K---------------------------P--NEKKRFINE 778 (932)
Q Consensus 766 ------------------~~--------------------~---------------------------p--~~K~~~v~~ 778 (932)
++ . | ..|...++.
T Consensus 81 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 81 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHH
Confidence 00 0 1 124444444
Q ss_pred Hhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 779 LQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 779 l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
+.+ ....++++||+.||.+|++.|+++++|+++.+..++.||+++.+++-++|.++++.
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 432 13469999999999999999999999999999999999999998888899888763
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=8.1e-09 Score=113.77 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=97.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~~ 781 (932)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. .++... .++.|.+.++.+.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~--~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD--YAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC--eEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999996 444422 34566666655433
Q ss_pred ----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 782 ----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 782 ----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
....++||||+.||++|++.|++++++ ++.+..++.||.++..+++..+.++++
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 346799999999999999999999999 678888999999999999998887654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.3e-08 Score=110.13 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=102.2
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---C---------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---D--------------- 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~--------------- 761 (932)
..+++..||+++. -...+.+.+.++|++|+++|++++++||++...+..+.++++++. .
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~ 82 (282)
T 1rkq_A 6 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 82 (282)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCC
Confidence 4677778888764 245688999999999999999999999999999999999998742 0
Q ss_pred ---------------------------------ceecc----------------c-----------------------Ch
Q 002354 762 ---------------------------------KVLSG----------------V-----------------------KP 769 (932)
Q Consensus 762 ---------------------------------~v~~~----------------~-----------------------~p 769 (932)
.+|.. + .+
T Consensus 83 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 162 (282)
T 1rkq_A 83 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 162 (282)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCH
Confidence 01110 0 00
Q ss_pred h----------------------------------hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 N----------------------------------EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~----------------------------------~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+ .|...++.+.+ ....++++||+.||.+|++.|++|++|+++
T Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~ 242 (282)
T 1rkq_A 163 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA 242 (282)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCC
Confidence 0 01111111111 124589999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+..++.||+++.+++.++|.++++
T Consensus 243 ~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 243 IPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred cHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999999999886
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.71 E-value=4.5e-08 Score=99.96 Aligned_cols=114 Identities=17% Similarity=0.267 Sum_probs=89.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-----------------ccChhhHHHHHHHH-hh
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINEL-QN 781 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-----------------~~~p~~K~~~v~~l-~~ 781 (932)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..+.++. ...|+.|.+.+..+ .-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGL 162 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGG
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCC
Confidence 7899999999999999999999999999999999999996433332 23455677777665 55
Q ss_pred CCCEEEEEcCCcccHHHHHh----CCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 782 DENVVAMVGDGINDAAALAS----SHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 782 ~g~~v~~vGDg~ND~~al~~----A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
....++||||+.||.+|++. +.+++++++..+..++.||+++. ++..+.+++
T Consensus 163 ~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 163 IDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp CCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred CCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 67899999999999999976 34445555777888899999984 677666543
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.5e-08 Score=102.30 Aligned_cols=71 Identities=25% Similarity=0.411 Sum_probs=63.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++|+++||++.+..+
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISP--------EELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEcCC
Confidence 4688999999999999999999999999999999999999999999876665 7899999999998766543
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-08 Score=102.94 Aligned_cols=109 Identities=20% Similarity=0.380 Sum_probs=90.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--c------ee--cccChhhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--K------VL--SGVKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~------v~--~~~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.|++.|++++++|+++...+..+ +.+|+... . ++ ....|..|...++.+ ....++|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i~ 155 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFILA 155 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEEE
Confidence 7899999999999999999999999999888888 99998521 0 00 123457799988888 5678999
Q ss_pred EcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||++|++.|+++++|+++.+ .||+++. ++..+.++++
T Consensus 156 iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 156 MGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred EeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 9999999999999999999998776 8999985 6676776654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.2e-08 Score=107.65 Aligned_cols=53 Identities=25% Similarity=0.293 Sum_probs=49.5
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++.||+|+.+++-++|.++++
T Consensus 208 ~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 208 QNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp GGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 35899999999999999999999999999999999999999888899998876
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=4.6e-08 Score=99.81 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=93.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----CceecccChhhH------HHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSGVKPNEK------KRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~~~~p~~K------~~~v~~l~~~g~~v~~ 788 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++.-....| ..+.+.+.-....++|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~ 149 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVM 149 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 467899999999999999999999999999999999999841 234433222222 3344444444567999
Q ss_pred EcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
|||+.||+.|.+.|++ +|+|+++.+..++.||+++ +++..+...++..
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 9999999999999999 9999988888888899988 4788888877653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=9e-08 Score=102.63 Aligned_cols=133 Identities=20% Similarity=0.185 Sum_probs=100.3
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-C-----------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-D----------------- 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~----------------- 761 (932)
..+++..||+++- -...+.+.+.++|++ +++|++++++||++...+..+.+++|++. .
T Consensus 3 kli~~DlDGTLl~---~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i 78 (268)
T 1nf2_A 3 RVFVFDLDGTLLN---DNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVI 78 (268)
T ss_dssp CEEEEECCCCCSC---TTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEE
T ss_pred cEEEEeCCCcCCC---CCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEE
Confidence 4567778888764 234688999999999 99999999999999999999999998742 0
Q ss_pred ------------------------------ceec--------------ccC------------------------hhhHH
Q 002354 762 ------------------------------KVLS--------------GVK------------------------PNEKK 773 (932)
Q Consensus 762 ------------------------------~v~~--------------~~~------------------------p~~K~ 773 (932)
.++. ++. ++...
T Consensus 79 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~ 158 (268)
T 1nf2_A 79 LNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLD 158 (268)
T ss_dssp EECCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHH
T ss_pred EecCCCHHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHH
Confidence 0111 000 00001
Q ss_pred HHHHHHhh----C----------------------------------CCEEEEEcCCcccHHHHHhCCeeEEecCchHHH
Q 002354 774 RFINELQN----D----------------------------------ENVVAMVGDGINDAAALASSHIGVAMGGGVGAA 815 (932)
Q Consensus 774 ~~v~~l~~----~----------------------------------g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a 815 (932)
++.+.+++ . ...++++||+.||.+|++.|++|++|+++.+..
T Consensus 159 ~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~ 238 (268)
T 1nf2_A 159 ELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKV 238 (268)
T ss_dssp HHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHH
T ss_pred HHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHH
Confidence 12222211 0 134889999999999999999999999999999
Q ss_pred HhhcCEEEeCCChhHHHHHHH
Q 002354 816 SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 816 ~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++.||+++.+++.++|.++++
T Consensus 239 ~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 239 KEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp HHHCSEECCCTTTTHHHHHHT
T ss_pred HhhCCEEEccCCcchHHHHHH
Confidence 999999999989999998875
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.61 E-value=6e-08 Score=93.78 Aligned_cols=69 Identities=23% Similarity=0.387 Sum_probs=62.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+.+..|.|+||+|++|+..||++|++++||.+++||+.++++.|.|++...+. +.+.+++++.||++..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQP--------LEIAQFIQDLGFEAAV 71 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCH--------HHHHHHHhcCCCceEe
Confidence 45688999999999999999999999999999999999999999998765554 6789999999998754
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-07 Score=95.39 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=92.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec----------ccChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS----------GVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~----------~~~p~~K~~~v~~l~~~g~~ 785 (932)
++.|++.+.++.|++. ++++++|+.+...+..+.+.+|+.. +.+.. .-.|+.|...++.+...+..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~ 147 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence 5689999999999999 9999999999999999999999973 11111 14567899999999888899
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++||||+.||++|.+.|++++++.. .+..++.++.++..+++..+.++++
T Consensus 148 ~~~iGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 148 VIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESC-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred EEEEeCChhhHHHHHhcCccEEECC-cHHHHHHHhhhccccchHHHHHHHH
Confidence 9999999999999999999999854 4444544443322367888877664
|
| >2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A | Back alignment and structure |
|---|
Probab=98.57 E-value=9.3e-08 Score=79.97 Aligned_cols=61 Identities=23% Similarity=0.373 Sum_probs=52.9
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+..|.|+||+|++|+..|+++|++++||.+++||+.++++.|.++.. .+.++++||.+...
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~---------------~~~i~~~Gy~~~~~ 64 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS---------------IQQVEQAGAFEHLK 64 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC---------------HHHHHHHHTTTTCE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc---------------HHHHHHhCCCcccc
Confidence 56899999999999999999999999999999999999999998752 12567889986644
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=5e-08 Score=103.19 Aligned_cols=53 Identities=17% Similarity=0.150 Sum_probs=48.7
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh-------cCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV-------ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~-------ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-++|.++++
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred HHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 35899999999999999999999999999999986 889999999999999886
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.53 E-value=2e-07 Score=96.95 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=92.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~ 788 (932)
..+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 4578999999999999999999999999999999999999852 22222 21 223334555666556678999
Q ss_pred EcCCcccHHHHHhCCe---eEEecCch-HHHHh-hcCEEEeCCChhHHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI---GVAMGGGV-GAASE-VASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 789 vGDg~ND~~al~~A~v---gIa~~~~~-~~a~~-~ad~vl~~~~~~~i~~~i~~g 838 (932)
|||+.||+.|++.|++ +|++|++. +..++ .||+++ +++..+.++++.+
T Consensus 183 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 183 IGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp EESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred EcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 9999999999999999 88888443 55554 799998 4788888887754
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.52 E-value=5.5e-07 Score=97.52 Aligned_cols=53 Identities=28% Similarity=0.389 Sum_probs=49.8
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-++|.++|+
T Consensus 233 ~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 233 EETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp GGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999999999999999886
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=4e-07 Score=99.47 Aligned_cols=136 Identities=21% Similarity=0.271 Sum_probs=103.4
Q ss_pred CeEEEEEECCEEEEEEEe-cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcC-CC---CC----------
Q 002354 699 QSLVYVGVDNMLAGLIYV-EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA--SLVG-IP---KD---------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l-~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia--~~~g-i~---~~---------- 761 (932)
...+++..||+++. - ...+.+.+.++|++|+++|++++++||++...+..+. ++++ ++ ..
T Consensus 27 ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~ 103 (301)
T 2b30_A 27 IKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 103 (301)
T ss_dssp CCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred ccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEE
Confidence 46888888998864 2 3468899999999999999999999999999999999 8877 53 10
Q ss_pred ----------------------------c----eec-c----------c---------C---------------------
Q 002354 762 ----------------------------K----VLS-G----------V---------K--------------------- 768 (932)
Q Consensus 762 ----------------------------~----v~~-~----------~---------~--------------------- 768 (932)
. ++. . . .
T Consensus 104 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~ 183 (301)
T 2b30_A 104 DQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLM 183 (301)
T ss_dssp CTTCCEEEECCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEE
T ss_pred eCCCCEEEEccCCHHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEE
Confidence 1 121 0 0 0
Q ss_pred ----hhhHHHHHHHHhh---C-----------------------------------CCEEEEEcCCcccHHHHHhCCeeE
Q 002354 769 ----PNEKKRFINELQN---D-----------------------------------ENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 769 ----p~~K~~~v~~l~~---~-----------------------------------g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+++..++.+.+++ . ...++++||+.||.+|++.|++|+
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v 263 (301)
T 2b30_A 184 IVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF 263 (301)
T ss_dssp ECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE
Confidence 0001122222321 0 135889999999999999999999
Q ss_pred EecCchHHHHhhcCEEEe-CCChhHHHHHHHH
Q 002354 807 AMGGGVGAASEVASVVLM-GNRLSQLLVALEL 837 (932)
Q Consensus 807 a~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~~ 837 (932)
+|+++.+..++.||+++. +++.++|.++|+.
T Consensus 264 a~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 264 AVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred EEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 999999999999999999 9999999998863
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=2.7e-07 Score=95.11 Aligned_cols=118 Identities=15% Similarity=0.229 Sum_probs=89.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccCh--hhH----HHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKP--NEK----KRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p--~~K----~~~v~~l~~~g~~v~~ 788 (932)
..+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++ +...+ ..| ..+.+.+.-....+++
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~ 164 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM 164 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence 3578999999999999999999999999999999999999862 2222 22211 123 3344444444568999
Q ss_pred EcCCcccHHHHHhCCe---eEEecCchHHH--HhhcCEEEeCCChhHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI---GVAMGGGVGAA--SEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 789 vGDg~ND~~al~~A~v---gIa~~~~~~~a--~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|||+.||+.|++.|++ +|++|++.... +..||+++. ++..+.+++..
T Consensus 165 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 165 IGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp EESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 9999999999999999 88888654433 578999984 78888877764
|
| >1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 | Back alignment and structure |
|---|
Probab=98.44 E-value=4e-07 Score=94.47 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+++|.|+ |+|++|+++||++|++++||.+++||+.++++.|.++ .++ +++.++|+++||++.+...
T Consensus 5 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aI~~~Gy~a~~~~~ 72 (222)
T 1qup_A 5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 72 (222)
T ss_dssp CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHHTTCCCEEECC
T ss_pred ceEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCH--------HHHHHHHHHcCCccccccC
Confidence 456789999 9999999999999999999999999999999999863 233 7899999999999876554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.43 E-value=4.5e-07 Score=96.24 Aligned_cols=119 Identities=20% Similarity=0.220 Sum_probs=87.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-cc------ChhhHHHHHHHHhhCC-CEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GV------KPNEKKRFINELQNDE-NVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~------~p~~K~~~v~~l~~~g-~~v~ 787 (932)
.+.+++.+.++.|++.|+++.++|++.......+.+.+|+.. +.+++ .. .|+--..+.+.+.-.. ..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 182 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 182 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEE
Confidence 467899999999999999999999999988888888887642 12221 11 2233344555555555 7899
Q ss_pred EEcCCcccHHHHHhCC---eeEEecCc------------------------hHHHHhh-cCEEEeCCChhHHHHHHHHHH
Q 002354 788 MVGDGINDAAALASSH---IGVAMGGG------------------------VGAASEV-ASVVLMGNRLSQLLVALELSR 839 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~---vgIa~~~~------------------------~~~a~~~-ad~vl~~~~~~~i~~~i~~gR 839 (932)
+|||+.||++|++.|+ +++++|++ .+..++. ||+++ +++..+..+++...
T Consensus 183 ~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 260 (267)
T 1swv_A 183 KVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEHIE 260 (267)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec--cCHHHHHHHHHHHh
Confidence 9999999999999999 56667755 3344444 99998 47888887775543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.4e-06 Score=90.33 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-----------------ccChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-----------------~~~p~~K~~~v~~l~~ 781 (932)
.+.|++.+.++.|++.|++++++|+.....+..+++.+|++ .+++ ...+..|.+.++.+.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~ 169 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ--HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLA 169 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC--EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999996 2222 1234667776665433
Q ss_pred -CC------CEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 782 -DE------NVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 782 -~g------~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
.| ..++|+||+.||++|++.|++++++...
T Consensus 170 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 170 GMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred HcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 34 6899999999999999999999999644
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3e-07 Score=95.18 Aligned_cols=115 Identities=23% Similarity=0.391 Sum_probs=87.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------------c------ChhhHHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------V------KPNEKKRFINEL 779 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------------~------~p~~K~~~v~~l 779 (932)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+..+.++.. - .+..|.+.++.+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 165 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 165 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHH
Confidence 688999999999999999999999999999999999999974223321 1 123677777665
Q ss_pred hhC-C-CEEEEEcCCcccHHHHHhCCeeEEecCc--hHHHHhhcCEEEeCCChhHHHHHH
Q 002354 780 QND-E-NVVAMVGDGINDAAALASSHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 780 ~~~-g-~~v~~vGDg~ND~~al~~A~vgIa~~~~--~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
.++ | ..++||||+.||+.+.+.|+++|+++.. .+.....+|+++. ++..+..++
T Consensus 166 ~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 166 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred HHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 442 3 5799999999999999999999888743 3445567899884 566665543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.40 E-value=6.5e-07 Score=92.76 Aligned_cols=116 Identities=14% Similarity=0.065 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.. +.++ +...+..| ..+.+.+.-....++||
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 3689999999999999999999998754 778889999853 1222 22222233 45556665566789999
Q ss_pred cCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||+.||+.|.+.|+++++|.++.+..+ .||+++.+.+--.+..++++
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred eCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 999999999999999999997776666 89999976554445555543
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A | Back alignment and structure |
|---|
Probab=98.38 E-value=6.2e-07 Score=86.87 Aligned_cols=66 Identities=33% Similarity=0.516 Sum_probs=58.8
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
.+..|.|+||+|++|+..||+.|++++||.++++|+.++++.+.+++...+. +.+.+.++++||++
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH--------HHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCH--------HHHHHHHHHcCCcc
Confidence 4567999999999999999999999999999999999999999998765554 67888899999965
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.1e-07 Score=93.23 Aligned_cols=68 Identities=25% Similarity=0.323 Sum_probs=59.6
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhc---Ccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSS 200 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~ 200 (932)
..++.|.|+||+|++|+++||++|.+++||.+++||+.++++.|.|++...+. +.+.++++++ ||.+.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSP--------VALQRAIEALPPGNFKVS 89 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHTTSSSSCSEEE
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHhccCCeEEE
Confidence 45678999999999999999999999999999999999999999999876555 6789999998 36553
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.37 E-value=2.4e-07 Score=99.77 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=79.2
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-C-------cee------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-D-------KVL------ 764 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~-------~v~------ 764 (932)
...+++..||+++. -.+.+.+.+.++|++|+++|++++++||++...+..+.+++|++. . .++
T Consensus 9 ~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 85 (275)
T 1xvi_A 9 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQ 85 (275)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCccc
Confidence 46788888998873 134466778999999999999999999999999999999998742 0 011
Q ss_pred --------cc-cC----------------------------------------------------------hhhHHHHHH
Q 002354 765 --------SG-VK----------------------------------------------------------PNEKKRFIN 777 (932)
Q Consensus 765 --------~~-~~----------------------------------------------------------p~~K~~~v~ 777 (932)
.. ++ ++...++.+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (275)
T 1xvi_A 86 EIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTA 165 (275)
T ss_dssp TSTTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHH
T ss_pred ccCceEEEecCCCHHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHH
Confidence 00 00 000001111
Q ss_pred HHhh-------------------------------CC----CE--EEEEcCCcccHHHHHhCCeeEEecCch---HHHHh
Q 002354 778 ELQN-------------------------------DE----NV--VAMVGDGINDAAALASSHIGVAMGGGV---GAASE 817 (932)
Q Consensus 778 ~l~~-------------------------------~g----~~--v~~vGDg~ND~~al~~A~vgIa~~~~~---~~a~~ 817 (932)
.+.+ .| .. ++++||+.||.+|++.|++||+|+++. +..++
T Consensus 166 ~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~ 245 (275)
T 1xvi_A 166 RLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHD 245 (275)
T ss_dssp HHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC--------
T ss_pred HHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhcc
Confidence 1111 02 34 999999999999999999999999987 56655
Q ss_pred h--cC-EEEeCCChhHHHHHHH
Q 002354 818 V--AS-VVLMGNRLSQLLVALE 836 (932)
Q Consensus 818 ~--ad-~vl~~~~~~~i~~~i~ 836 (932)
. || +++.+++-++|.++++
T Consensus 246 ~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 246 EDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp ----------------------
T ss_pred ccCCceeEccCCCchHHHHHHH
Confidence 3 78 8888889999998876
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.36 E-value=5.6e-07 Score=92.06 Aligned_cols=115 Identities=12% Similarity=0.068 Sum_probs=84.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|+++.++|++ .....+.+.+|+.. +.+++ .. . |+--..+.+.+.-....+++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i 168 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL 168 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence 46789999999999999999999988 44567788888752 12222 11 1 222233444444445679999
Q ss_pred cCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||++|++.|+++++|.++.+..+ .||+++.+.+--.+..+++
T Consensus 169 GD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 169 EDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp ESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHHH
Confidence 999999999999999999998887777 8999997665555555543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=6.6e-07 Score=91.66 Aligned_cols=112 Identities=18% Similarity=0.147 Sum_probs=85.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+........+.+.+|+.. +.++. ... |+--..+.+.+.-....+++|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~i 173 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 173 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 457899999999999999999999999998999999999852 22222 222 333344555555556789999
Q ss_pred cCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHH
Q 002354 790 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
||+.||++|++.|++++++ +++.+..+..||+++. ++..+.
T Consensus 174 GD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~ 218 (226)
T 1te2_A 174 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELT 218 (226)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCC
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHh
Confidence 9999999999999999999 5666667888999985 444443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.9e-07 Score=92.73 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=88.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-....+++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~i 170 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVI 170 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEE
Confidence 567899999999999999999999999999999999999863 22322 211 222233344444345679999
Q ss_pred cCCcccHHHHHhCCe---eEEec-CchHHHHhh-cCEEEeCCChhHHHHHHHHH
Q 002354 790 GDGINDAAALASSHI---GVAMG-GGVGAASEV-ASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 790 GDg~ND~~al~~A~v---gIa~~-~~~~~a~~~-ad~vl~~~~~~~i~~~i~~g 838 (932)
||+.||+.|++.|++ +|++| +..+..++. ||+++ +++..+..+++..
T Consensus 171 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 171 GDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp ESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred eCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 999999999999999 56666 555555654 99998 4788888877653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=5e-07 Score=97.70 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=90.6
Q ss_pred ccHHHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCCc-------------ee
Q 002354 720 IRDDAAHVVNSLSSQ-GIGVYMLSGD---------------------KKNSAEYVASLVGIPKDK-------------VL 764 (932)
Q Consensus 720 lr~~~~~~i~~L~~~-Gi~v~~~TGd---------------------~~~~a~~ia~~~gi~~~~-------------v~ 764 (932)
.++++.+.++.|++. |+++.+.|.. ....+..+.+..|+.... .+
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 202 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD 202 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence 467888889999887 8888888865 455667777777874111 22
Q ss_pred cccCh--hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 765 SGVKP--NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 765 ~~~~p--~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
....| ..|...++.+.+ ....++++||+.||.+|++.|+++++|+++.+..++.||+++.+++-+++.++++
T Consensus 203 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 33333 356666665544 3457999999999999999999999999999999999999999888889988876
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-06 Score=93.46 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=46.3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
..++++||+.||.+|++.|++|++|+|+.+ . .+++++.+++-+++.++++.
T Consensus 195 ~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 195 RFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp TSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 679999999999999999999999999988 4 78899999999999888763
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-06 Score=98.12 Aligned_cols=101 Identities=23% Similarity=0.274 Sum_probs=77.4
Q ss_pred CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC----CCCceecc-----------------
Q 002354 708 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI----PKDKVLSG----------------- 766 (932)
Q Consensus 708 ~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi----~~~~v~~~----------------- 766 (932)
+.+.+...-...++|++++.|+.|+++|++|+|+||.....++.+|+++|+ ++++|++.
T Consensus 210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~ 289 (385)
T 4gxt_A 210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD 289 (385)
T ss_dssp CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT
T ss_pred ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc
Confidence 344445555567899999999999999999999999999999999999874 44444431
Q ss_pred ---cChhhHHHHHHHHhhC--C-CEEEEEcCCcccHHHHHh-CCeeEEe
Q 002354 767 ---VKPNEKKRFINELQND--E-NVVAMVGDGINDAAALAS-SHIGVAM 808 (932)
Q Consensus 767 ---~~p~~K~~~v~~l~~~--g-~~v~~vGDg~ND~~al~~-A~vgIa~ 808 (932)
...+.|.+.|+.+.+. | ..++++|||.||.+||+. +|.++++
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2346799999887533 2 358889999999999985 5555544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.2e-06 Score=85.40 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=84.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCCcee-c-----cc----Ch--
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVG--IPKDKVL-S-----GV----KP-- 769 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~v~-~-----~~----~p-- 769 (932)
++.|++.+++++|+++|+++.++|+.+. ..+..+.+.+| ++ .++ + .. .|
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD--AIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC--EEEEECCCTTSCCSSSTTSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee--EEEEcCCCCCCCCCCCCCCH
Confidence 5789999999999999999999999886 56778888999 54 444 1 11 12
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe---eEEecCchHHHH----hhcCEEEeCCChhHHHHHHH
Q 002354 770 NEKKRFINELQNDENVVAMVGDGINDAAALASSHI---GVAMGGGVGAAS----EVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v---gIa~~~~~~~a~----~~ad~vl~~~~~~~i~~~i~ 836 (932)
+-=..+.+.+.-....++||||+.||+.|.+.|++ +|..|.+..... ..+|+++. ++..+.+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEec--CHHHHHHHHH
Confidence 22234555555566789999999999999999995 666666555544 45788884 7887777653
|
| >1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-06 Score=91.61 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.3
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+++|.|+ |+|++|+.+||++|++++||.+++||+.++++.|..+ .++ +++.++|+++||++.+...
T Consensus 6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTCCCEEEEE
T ss_pred ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC---CCH--------HHHHHHHHHhCCCcccccC
Confidence 356789999 9999999999999999999999999999999999843 233 7899999999999876543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=89.02 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=81.2
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC----h--hhHHHHHHHHhhCCCEEEEEc
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK----P--NEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~----p--~~K~~~v~~l~~~g~~v~~vG 790 (932)
+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ ... | +--..+.+.+.-....+++||
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iG 169 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIG 169 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEc
Confidence 46899999999999999999999999999999999999853 12222 211 2 112333344433456799999
Q ss_pred CCcccHHHHHhCCeeEEe----cCchHHHHhh-cCEEEeCCChhHHHHHHH
Q 002354 791 DGINDAAALASSHIGVAM----GGGVGAASEV-ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~----~~~~~~a~~~-ad~vl~~~~~~~i~~~i~ 836 (932)
|+.||++|++.|++++++ +++.+..++. ||+++. ++..+.+.++
T Consensus 170 D~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 170 DSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp SSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC----
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 999999999999999887 4455555554 899885 5566655553
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-06 Score=90.48 Aligned_cols=118 Identities=16% Similarity=0.111 Sum_probs=92.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~ 788 (932)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++|
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 3567899999999999999999999999999999999999863 22222 11 122234455555555678999
Q ss_pred EcCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|||+.||+.|.+.|++++++ +++.+..+..+|+++. ++..+.++++.
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 99999999999999999999 6666666778999984 78888888764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.22 E-value=1e-06 Score=88.68 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=82.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-cc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|++...... ..+.+|+... .+++ .. . |+--..+.+.+.-....+++|
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~i 163 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 163 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEE
Confidence 45799999999999999999999999988888 8888898531 2222 11 1 222345555565556789999
Q ss_pred cCCcccHHHHHhCCee-EEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIG-VAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-Ia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.||++|++.|+++ |+|+++. . .+|+++. ++..+.+++
T Consensus 164 GD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 164 GDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred CCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 9999999999999997 8888776 3 6888874 566665543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.3e-06 Score=89.11 Aligned_cols=116 Identities=17% Similarity=0.213 Sum_probs=86.4
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccCh--hhH----HHHHHHHhhC-CCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKP--NEK----KRFINELQND-ENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p--~~K----~~~v~~l~~~-g~~v~ 787 (932)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.++ +...+ ..| ..+.+.+.-. ...++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3578999999999999999999999999999999999999852 2222 22221 123 3344445445 67899
Q ss_pred EEcCCcccHHHHHhCCe---eEEecCchHHH--HhhcCEEEeCCChhHHHHHH
Q 002354 788 MVGDGINDAAALASSHI---GVAMGGGVGAA--SEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~v---gIa~~~~~~~a--~~~ad~vl~~~~~~~i~~~i 835 (932)
+|||+.||+.|.+.|++ ++++|++.... +..+|+++. ++..+.+++
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 99999999999999999 66667544333 478999985 566666554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.5e-06 Score=87.10 Aligned_cols=113 Identities=12% Similarity=0.198 Sum_probs=83.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCC-EEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDEN-VVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~-~v~~ 788 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-... .+++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~ 182 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFF 182 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEE
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEE
Confidence 568999999999999999999999999999999999999852 22222 222 2223455566655566 7999
Q ss_pred EcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||+.|.+.|++ +|.++++.+ ..+|+++ +++..+.++++
T Consensus 183 vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 183 IGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp EESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred EcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 9999999999999997 677776654 3577776 46887777654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-06 Score=91.64 Aligned_cols=55 Identities=18% Similarity=0.359 Sum_probs=45.5
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
..+++..||+++ .+..-+.+.++|++|+++|++++++||++...+..+.+.+|++
T Consensus 3 kli~~DlDGTLl-----~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 3 RLIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp EEEEECCSTTTC-----TTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred cEEEEeCCCCcc-----CCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456677788887 3433345999999999999999999999999999999998873
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.17 E-value=6.1e-06 Score=85.17 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=89.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++. +++.++|+........+.+.+|+.. +.+++. .. |+--..+.+.+.-....+++|
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence 4578999999999999 9999999999999999999999852 222221 12 222344555555556789999
Q ss_pred cCCc-ccHHHHHhCC---eeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~---vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+ ++++++++.+..++.+|+++. ++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 9997 9999999999 577778777777789999984 7777777765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.6e-06 Score=89.29 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=89.3
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~ 788 (932)
-.+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ ... |+--..+.+.+.-....+++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 174 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF 174 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence 3578999999999999999999999999999999999999852 22322 211 22233445555545678999
Q ss_pred EcCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||+.|.+.|++++++ ++..+..+..+|+++. ++..+..+++
T Consensus 175 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 224 (230)
T 3um9_A 175 VSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRFS 224 (230)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTCC
T ss_pred EeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHHH
Confidence 99999999999999999999 4555556678999985 6777766543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.16 E-value=6.4e-06 Score=87.41 Aligned_cols=117 Identities=16% Similarity=0.076 Sum_probs=86.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-ccC------hhhHHHHHHHHhhCC-CEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GVK------PNEKKRFINELQNDE-NVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~~------p~~K~~~v~~l~~~g-~~v~ 787 (932)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-.. ..++
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 190 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCI 190 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEE
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEE
Confidence 567899999999999999999999999999999988888642 22222 111 222244555555566 7899
Q ss_pred EEcCCcccHHHHHhCC---eeEEecC------------------------chHHHHh-hcCEEEeCCChhHHHHHHHH
Q 002354 788 MVGDGINDAAALASSH---IGVAMGG------------------------GVGAASE-VASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~---vgIa~~~------------------------~~~~a~~-~ad~vl~~~~~~~i~~~i~~ 837 (932)
||||+.||+.|.+.|+ ++|++|. +.+..++ .+|+++. ++..+..+++.
T Consensus 191 ~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 191 KVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVID--SVADLETVITD 266 (277)
T ss_dssp EEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEES--SGGGTHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEec--CHHHHHHHHHH
Confidence 9999999999999999 4566663 2344444 4999994 78888877764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=5.2e-06 Score=85.67 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=80.3
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCC--c-eeccc-C--hhhHHHH----HHHHh--hCCCE
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKD--K-VLSGV-K--PNEKKRF----INELQ--NDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~-v~~~~-~--p~~K~~~----v~~l~--~~g~~ 785 (932)
.+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+... . +++.. . ++-+... .+.+. -....
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~ 172 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 172 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCccc
Confidence 3579999999999999 999999999999999999999998631 1 22221 1 1122333 33333 24467
Q ss_pred EEEEcCCcccHHHHHhCCee---EEecCchHHHHh--hcCEEEeCCChhHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIG---VAMGGGVGAASE--VASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vg---Ia~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 836 (932)
+++|||+.||++|.+.|++. ++.+........ .+|+++. ++..+..+++
T Consensus 173 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 173 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 99999999999999999954 444544443333 3899885 4555555543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.5e-06 Score=89.65 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=84.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++. ..| +--..+.+.+.-....++|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 192 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 192 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence 3567899999999999999999999999999999999999852 122221 222 2334455566555678999
Q ss_pred EcCCcccHHHHHhCCeeEE-ecC----chHHHHhhcCEEEeCCChhHHHHH
Q 002354 789 VGDGINDAAALASSHIGVA-MGG----GVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa-~~~----~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
|||+.||++|.+.|++++. +.. +.+..+..+|+++. ++..+..+
T Consensus 193 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~~ 241 (243)
T 2hsz_A 193 VGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKI 241 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGG
T ss_pred EcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHHH
Confidence 9999999999999999844 432 23445677999884 56655443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.14 E-value=4.5e-06 Score=88.11 Aligned_cols=118 Identities=15% Similarity=0.105 Sum_probs=87.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cc-eec-ccCh-hhH------HHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLS-GVKP-NEK------KRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~-v~~-~~~p-~~K------~~~v~~l~~~g~~v 786 (932)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +. +++ ...+ ..| ..+.+.+.-....+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC 188 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence 3567899999999999999999999999999999999999851 12 332 2222 222 33444444445789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCc-------hHHH-HhhcCEEEeCCChhHHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGG-------VGAA-SEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~-------~~~a-~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
++|||+.||+.|.+.|+++ |.+..+ .+.. ...+|+++ +++..+.++++.
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 9999999999999999998 555433 2333 34599998 478888888764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.14 E-value=6.1e-06 Score=85.29 Aligned_cols=116 Identities=16% Similarity=0.221 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. -.|+-...+.+.+.-....++|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI 161 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence 3568999999999999999999999999999999999999852 233331 1233345555666555678999
Q ss_pred EcCCcccHHHHHhCCee-EEecCc--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||++|.+.|++. |++..+ .... ..+|+++. ++..+..+++
T Consensus 162 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 162 VGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp EESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 99999999999999988 666432 2222 56888874 6777776654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-05 Score=83.32 Aligned_cols=116 Identities=20% Similarity=0.262 Sum_probs=83.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCcee-cc----------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK---------------KNSAEYVASLVGIPKDKVL-SG---------------- 766 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~v~-~~---------------- 766 (932)
++.|++.+++++|+++|++++++|+.. ...+..+.+++|+..+.++ +.
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~ 129 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 129 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcC
Confidence 678999999999999999999999998 4778888899998633333 11
Q ss_pred --cChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee--EEe--cCc-hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 767 --VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAM--GGG-VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 767 --~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg--Ia~--~~~-~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
-.|+--..+.+.+.-....++||||+.||+.+.+.|++. |.+ |.. .+.....+|+++. ++..+.+++.
T Consensus 130 ~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~el~~~l~ 204 (211)
T 2gmw_A 130 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 204 (211)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHHHHHHHH
Confidence 112222344555554567799999999999999999964 444 322 2333456899884 6887777654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.9e-06 Score=85.75 Aligned_cols=116 Identities=12% Similarity=0.169 Sum_probs=84.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVV 786 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v 786 (932)
.+.+++.+.++.|++.|+++.++|+.. ......+.+.+|+.. +.++.. ..| +--..+.+.+.-....+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 457999999999999999999999999 888889999999852 222221 122 22223333333345689
Q ss_pred EEEcCCc-ccHHHHHhCCeeEEe---cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGI-NDAAALASSHIGVAM---GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~-ND~~al~~A~vgIa~---~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+. ||+.|++.|++++++ ++..+..+..+|+++ +++..+..+++
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 9999999 999999999999999 443333445578777 46777776654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.7e-06 Score=86.14 Aligned_cols=113 Identities=21% Similarity=0.179 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....+++|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i 168 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALII 168 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEE
Confidence 578999999999999999999999999999999999999852 22222 21 2233345556665556789999
Q ss_pred cCCcccHHHHHhCCeeEEecCc--hHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGG--VGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~--~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||+.||+.|.+.|++++++.+. ....+..+|+++. ++..+.+
T Consensus 169 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~~ 212 (214)
T 3e58_A 169 EDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVLD 212 (214)
T ss_dssp ECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGGG
T ss_pred eccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHHh
Confidence 9999999999999998888532 3344477999885 5555443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=3e-06 Score=90.95 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhH----HHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGI--GVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEK----KRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi--~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K----~~~v~~l~~~g 783 (932)
++.|++.+.++.|++.|+ +++++|+.....+..+.+.+|+.. +.+++ .. .+.-| ..+.+.+.-..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 221 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR 221 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCC
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCC
Confidence 568999999999999999 999999999999999999999853 22221 11 11223 33444444455
Q ss_pred -CEEEEEcCCcccHHHHHhCCeeEEecCchHHH------HhhcCEEEeCCChhHHHHHH
Q 002354 784 -NVVAMVGDGINDAAALASSHIGVAMGGGVGAA------SEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 784 -~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a------~~~ad~vl~~~~~~~i~~~i 835 (932)
..++||||+.||+.|.+.|++|.+|+++.+.. ...||+++. ++..+.+++
T Consensus 222 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 222 YENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred cccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 78999999999999999999999887443332 237888884 676666544
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.07 E-value=7.2e-06 Score=85.69 Aligned_cols=116 Identities=21% Similarity=0.263 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CCceecc---------------cCh--------hhHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLSG---------------VKP--------NEKK 773 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~-~~~v~~~---------------~~p--------~~K~ 773 (932)
-++.|++.+.++.|+++|++++++|+.+...+..+.+ |+. .+.+++. -.| .+|.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 4678999999999999999999999999998888887 662 1233321 112 2477
Q ss_pred HHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh--cCEEEeCCChhHHHHHHHH
Q 002354 774 RFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 774 ~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~--ad~vl~~~~~~~i~~~i~~ 837 (932)
..++.+......++||||+.||+.+.+.|++.++.....+...+. +|+++ +++..+..++..
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred HHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 888888877889999999999999999999998753222333333 66655 578888776653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.06 E-value=8.5e-06 Score=84.83 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=80.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----Cceec-cc------ChhhHHHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLS-GV------KPNEKKRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~-~~------~p~~K~~~v~~l~~~g~~v 786 (932)
.++.+++.+.++.|++.|+++.++|+..........+. |+.. +.+++ .. .|+--..+.+.+.-....+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 185 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA 185 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence 46779999999999999999999999988877777777 8762 22222 11 1222344555555556789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCch--HH--HHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGV--GA--ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~--~~--a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+.||+.|.+.|++. |.+.++. .. .+..||+++. ++..+..+++
T Consensus 186 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 186 LVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp EEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 9999999999999999975 4444332 22 2247999984 6777776665
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.06 E-value=7.2e-06 Score=85.61 Aligned_cols=116 Identities=11% Similarity=0.092 Sum_probs=82.3
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----Cceecc-c------ChhhHHHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSG-V------KPNEKKRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~~-~------~p~~K~~~v~~l~~~g~~v 786 (932)
..+.+++.+.++.|++.|+++.++|+.....+....+. |+.. +.+++. . .|+--..+.+.+.-....+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 186 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA 186 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 35679999999999999999999999988877777777 8752 222221 1 1222233444444445689
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCchHH----HHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGVGA----ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+.||+.|.+.|++. |.+.++... .+..+|+++. ++..+.++++
T Consensus 187 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 187 VVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 9999999999999999995 555443322 2346999984 7888877665
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.02 E-value=2.1e-05 Score=83.52 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=55.9
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 771 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 771 ~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.|...++.+.+ ....++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 46655555543 3457999999999999999999999999999999999999998888888998875
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.02 E-value=9.5e-06 Score=84.94 Aligned_cols=115 Identities=18% Similarity=0.103 Sum_probs=86.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----c--ChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----V--KPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----~--~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
++.+++.+.++.|++. ++++++|+........+.+.+|+..+.+++. - .|+--..+.+.+.-....+++|||
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 198 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAA 198 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcC
Confidence 4578999999999986 9999999999999999999999864444332 1 122223344445445578999999
Q ss_pred CcccHHHHHhCCeeEEecC-----c---hHHH--HhhcCEEEeCCChhHHHHHHH
Q 002354 792 GINDAAALASSHIGVAMGG-----G---VGAA--SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~~-----~---~~~a--~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+.||+.|.+.|+++++|.+ | .+.. +..+|+++. ++..+..++.
T Consensus 199 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 199 HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 9999999999999999975 2 2222 567899984 7888877764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.01 E-value=5.4e-06 Score=85.76 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.. +.+++ . -.|+--..+.+.+.-....++||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 174 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV 174 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999852 22322 1 12222334455555455679999
Q ss_pred cCCcccHHHHHhCCeeEEec----CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMG----GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~----~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||+.|.+.|++++++- +..+..+..+|+++. ++..+..+++
T Consensus 175 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 175 ASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp ESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 99999999999999998882 333334556898884 6777665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.01 E-value=2.4e-05 Score=81.56 Aligned_cols=116 Identities=18% Similarity=0.175 Sum_probs=84.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc----Ch--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----KP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~----~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .| +--..+.+.+.-....++||
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i 173 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV 173 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467899999999999999999999999999999999999853 22322 21 12 21233444454455689999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---cCchHHHHh---hcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAM---GGGVGAASE---VASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~---~~~~~~a~~---~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+++.+. |........ .+|+++. ++..+..+++
T Consensus 174 GD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 174 GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred CCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 9998 999999999998655 433333333 6898874 6777766654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.1e-05 Score=84.17 Aligned_cols=115 Identities=20% Similarity=0.150 Sum_probs=83.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....+++|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 184 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFV 184 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 577999999999999999999999999999999999999852 22322 21 2222334455555456689999
Q ss_pred cCCcccHHHHHhCCeeEEe---cCchHHHHhhc-CEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAM---GGGVGAASEVA-SVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~---~~~~~~a~~~a-d~vl~~~~~~~i~~~i 835 (932)
||+.||+.|.+.|++.... ++..+..+..+ |+++. ++..+..++
T Consensus 185 GD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 185 SSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHH
Confidence 9999999999999966443 43333334457 98884 677776655
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.98 E-value=4.6e-06 Score=87.75 Aligned_cols=62 Identities=19% Similarity=0.370 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcccHHHHHhC--CeeEEecCchHHHHhhcCEEEeC-CChhHHHHHHHH
Q 002354 771 EKKRFINELQNDENVVAMVGDGINDAAALASS--HIGVAMGGGVGAASEVASVVLMG-NRLSQLLVALEL 837 (932)
Q Consensus 771 ~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A--~vgIa~~~~~~~a~~~ad~vl~~-~~~~~i~~~i~~ 837 (932)
+|..-++.|.+.-. |+++||+.||.+||+.| ++||||+|+ ++.||+++.+ ++.++|.++|+.
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 79999999987644 99999999999999999 999999998 6789999988 778888888763
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.9e-06 Score=87.67 Aligned_cols=111 Identities=9% Similarity=0.169 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.++ +......| ..+.+.+.-....+++|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v 161 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 161 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence 4689999999999999 9999999999999999999999852 1222 22111223 44445554455789999
Q ss_pred cCCcccHHHHHhCCeeEEecC----chHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGG----GVGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~----~~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||+.||++|.+.|++++++.+ ..+..++ +|+++. ++..+.+
T Consensus 162 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 162 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred CCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 999999999999999999742 3444455 999885 4555543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.7e-05 Score=82.76 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=85.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----cChh--hHHHHHHHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----VKPN--EKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~vGD 791 (932)
++.+++.+.++.|++. +++.++|+........+.+.+|+..+.+++. ..|+ --..+.+.+.-....+++|||
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 194 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAA 194 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeC
Confidence 5678999999999997 9999999999999999999999863333321 1221 112223333333467999999
Q ss_pred CcccHHHHHhCCeeEEecCchHH----------HHhhcCEEEeCCChhHHHHHHHH
Q 002354 792 GINDAAALASSHIGVAMGGGVGA----------ASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~~~~~~----------a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
+.||+.|.+.|+++++|.+.... .+..+|+++ +++..+..++..
T Consensus 195 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 195 HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 99999999999999999752211 356789998 478888887754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.92 E-value=3.1e-05 Score=79.51 Aligned_cols=112 Identities=15% Similarity=0.245 Sum_probs=80.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-cc------Ch--hhHHHHHHHHhhCCCEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GV------KP--NEKKRFINELQNDENVV 786 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~------~p--~~K~~~v~~l~~~g~~v 786 (932)
++.+++.+.++.|+. +++++|+........+.+.+|+.. +.+++ .. .| +--..+.+.+.-....+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~ 163 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 163 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence 456788888887764 899999999999999999999862 22322 11 11 11233444454455789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCchH-------HHHhh-cCEEEeCCChhHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGVG-------AASEV-ASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~~-------~a~~~-ad~vl~~~~~~~i~~~i 835 (932)
++|||+.||++|++.|+++ |+++++.. ..++. ||+++. ++..+..++
T Consensus 164 i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 164 VVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 9999999999999999998 77765543 36666 999984 566676655
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.8e-05 Score=82.59 Aligned_cols=115 Identities=14% Similarity=0.108 Sum_probs=81.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CCceecc-cChhh--H----HHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLSG-VKPNE--K----KRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~-~~~v~~~-~~p~~--K----~~~v~~l~~~g~~v~~vG 790 (932)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+. .+.+++. ..+.. | ....+.+.-....++|||
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vG 189 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIG 189 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEc
Confidence 35688999999999999999999999888889999999874 2233332 21111 2 334444544567899999
Q ss_pred CCcccHHHHHhCCee---EEecCch-HHHH-hhcCEEEeCCChhHHHHHH
Q 002354 791 DGINDAAALASSHIG---VAMGGGV-GAAS-EVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 791 Dg~ND~~al~~A~vg---Ia~~~~~-~~a~-~~ad~vl~~~~~~~i~~~i 835 (932)
|+.||+.|.+.|++. +++|.+. +..+ ..+|+++. ++..+...+
T Consensus 190 Ds~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 190 DSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp SSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 999999999999994 3444333 3333 36898884 677666554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.9e-05 Score=79.90 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=81.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+.. +.+++. .. |+--..+.+.+. ...++||
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~v 149 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLV 149 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEE
Confidence 56789999 9999999 9999999999999999999999852 233321 12 222244455555 5679999
Q ss_pred cCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.||+.|.+.|++..++ ++..+.....+|+++. ++..+..++
T Consensus 150 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 150 SSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp ESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred eCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 9999999999999999777 3333333456898874 677776655
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=81.71 Aligned_cols=113 Identities=16% Similarity=0.216 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceeccc-ChhhHHHHHHHH-hh---CCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGV-KPNEKKRFINEL-QN---DENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~-~p~~K~~~v~~l-~~---~g~~v~~vGD 791 (932)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+.. +.+++.- .+.-|.++++.+ ++ ....++||||
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgD 162 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECC
Confidence 467999999999999 99999999988888899999999852 2333221 112244444433 33 3467999999
Q ss_pred CcccHHHHHhCCe---eEEecCc-hHHHH-hhcCEEEeCCChhHHHHH
Q 002354 792 GINDAAALASSHI---GVAMGGG-VGAAS-EVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 792 g~ND~~al~~A~v---gIa~~~~-~~~a~-~~ad~vl~~~~~~~i~~~ 834 (932)
+.||+.|.+.|++ ++++|++ .+..+ ..+|+++. ++..+..+
T Consensus 163 s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 9999999999999 6666655 33444 35899885 45555443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.8e-05 Score=81.16 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=82.5
Q ss_pred cccHHHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCC--CceecccCh--hhHHHHHHHHhhCCCEEEEEcCCc
Q 002354 719 RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKP--NEKKRFINELQNDENVVAMVGDGI 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~~p--~~K~~~v~~l~~~g~~v~~vGDg~ 793 (932)
.+.+++.+.++.|++.| +++.++|+........+.+.+|+.. +.++..-.| +--..+.+.+.-....+++|||+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~ 184 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLMVGNSF 184 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEEECCCc
Confidence 56789999999999999 9999999999888899999999852 234433333 222334444444557899999996
Q ss_pred -ccHHHHHhCCeeEEe-------cCchHHHHhhc-CEEEeCCChhHHHHHH
Q 002354 794 -NDAAALASSHIGVAM-------GGGVGAASEVA-SVVLMGNRLSQLLVAL 835 (932)
Q Consensus 794 -ND~~al~~A~vgIa~-------~~~~~~a~~~a-d~vl~~~~~~~i~~~i 835 (932)
||+.|.+.|++++++ |++....+..+ |+++ +++..+..++
T Consensus 185 ~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 185 KSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp CCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred HHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 999999999999887 23333333444 7777 4677776653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.9e-05 Score=84.58 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=78.2
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCC-Cceec-cc------ChhhHHHHHHHHhh-------C
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPK-DKVLS-GV------KPNEKKRFINELQN-------D 782 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~v~~-~~------~p~~K~~~v~~l~~-------~ 782 (932)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.- .
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~ 193 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPS 193 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGG
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCC
Confidence 3578999999999999 99999999999999999999999852 22322 21 12222334444444 4
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEe---cCchHHHHh-hcCEEEeC
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAM---GGGVGAASE-VASVVLMG 825 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~---~~~~~~a~~-~ad~vl~~ 825 (932)
...+++|||+.||++|++.|++++++ +++.+..++ .||+++.+
T Consensus 194 ~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 194 KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 56799999999999999999987666 444444444 58998853
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.6e-05 Score=80.54 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccC----h--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVK----P--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~----p--~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|+ .|++++++|+........+.+.+|+.. +.++ +... | +--..+.+.+.-....+++|
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 46789999999999 999999999999999999999999852 1222 2221 1 11223333333345689999
Q ss_pred cCCc-ccHHHHHhCCeeEEecCchH--HHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAMGGGVG--AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~~~~~~--~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+. ||+.|.+.|++++++.+... ..+..+|+++. ++..+..+.
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~ 232 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL 232 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence 9995 99999999999999975433 55567999995 677666553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.9e-05 Score=80.05 Aligned_cols=115 Identities=10% Similarity=0.116 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------cChhhHHHH---HHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------VKPNEKKRF---INELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------~~p~~K~~~---v~~l~~~g~~v~~ 788 (932)
++.+++.+.++.|++ |+++.++|+..........+.++-..+.+++. -.|+-.... .+.+.-....++|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~ 177 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILH 177 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEE
Confidence 578999999999999 89999999999888888777766433344332 223322344 3333334567999
Q ss_pred EcCCc-ccHHHHHhCCeeEEecCch-----------HHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGI-NDAAALASSHIGVAMGGGV-----------GAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vgIa~~~~~-----------~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+. ||+.|.+.|+++++|.+.. +..+..+|+++. ++..+.++++
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l~ 235 (240)
T 3smv_A 178 TAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAHK 235 (240)
T ss_dssp EESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHHH
T ss_pred ECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHHH
Confidence 99996 9999999999999995322 233478999984 7887777765
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.80 E-value=3.6e-05 Score=79.38 Aligned_cols=115 Identities=15% Similarity=0.236 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH--HHHHH----HHh-hCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK--KRFIN----ELQ-NDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K--~~~v~----~l~-~~g~~v~~ 788 (932)
.+.|++.+.++.|++. +++.++|+.....+....+.+|+.. +.++ +...+..| ...++ .+. -....+++
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEE
Confidence 5678999999999999 9999999999999999999999852 1222 22211122 33333 333 23357999
Q ss_pred EcCCc-ccHHHHHhCCee-EEecCc--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGI-NDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vg-Ia~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+. ||+.|.+.|+++ |.+..+ .+..+..+|+++. ++..+.++++
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 99998 999999999995 444433 5566678999984 7888877764
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=6.3e-05 Score=79.89 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=47.1
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- .+.+-++++++|++|+++|++++++|| ++........+++|++
T Consensus 8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 56788888998764 566778999999999999999999999 6777777777777763
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.79 E-value=3.5e-05 Score=81.10 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=84.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++||
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 170 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 57799999999999 99999999999999999999999852 22222 21 2223344445554455679999
Q ss_pred cCCcccHHHHHhCCeeEEecCc---------------------------hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGG---------------------------VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~---------------------------~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||+.|.+.|++..++.+. .+..+..+|+++ +++..+..+++
T Consensus 171 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 242 (253)
T 1qq5_A 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (253)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred eCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee--CCHHHHHHHHH
Confidence 9999999999999999988654 122345689888 46777777654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.78 E-value=6.7e-05 Score=75.55 Aligned_cols=123 Identities=19% Similarity=0.149 Sum_probs=90.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCC--Cceecc-----------cChhhHHHHHHHHhhC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---NSAEYVASLVGIPK--DKVLSG-----------VKPNEKKRFINELQND 782 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---~~a~~ia~~~gi~~--~~v~~~-----------~~p~~K~~~v~~l~~~ 782 (932)
++.|++.++++.|+++|++++++|+... ..+..+.+.+|+.. +.+++. -.|+--..+.+.+.-.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 113 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID 113 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence 5789999999999999999999998776 88999999999853 123221 1223334455555555
Q ss_pred CCEEEEEcCC-cccHHHHHhCCeeEEe-cCchH-----HHH-hhcCEEEeCCChhHHHHHHHHHHHH
Q 002354 783 ENVVAMVGDG-INDAAALASSHIGVAM-GGGVG-----AAS-EVASVVLMGNRLSQLLVALELSRLT 841 (932)
Q Consensus 783 g~~v~~vGDg-~ND~~al~~A~vgIa~-~~~~~-----~a~-~~ad~vl~~~~~~~i~~~i~~gR~~ 841 (932)
...++||||. .+|+.+-+.|++.... .++.. ... ..+|.++...++..+.+++++.+.-
T Consensus 114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~~ 180 (189)
T 3ib6_A 114 KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKKI 180 (189)
T ss_dssp GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHHH
T ss_pred cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHHh
Confidence 6789999999 7999999999997444 33221 111 2679999777899999999886653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.78 E-value=5e-05 Score=75.63 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=70.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceecc-----cC--hhhHHHHHHHHhhCCCEEEEEc
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----VK--PNEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~vG 790 (932)
+.|++.+.++.|++.|++++++|+... .+..+.+.+|+... .+++. -. |+--..+.+.+.-. .+++||
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iG 159 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIG 159 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEc
Confidence 578999999999999999999998764 57788888998531 22221 11 22223333333323 799999
Q ss_pred CCcccHHHHHhCCeeEEecCchHHHHhhcC
Q 002354 791 DGINDAAALASSHIGVAMGGGVGAASEVAS 820 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~~~~~~~a~~~ad 820 (932)
|+.||.+|++.|++++++.+.....++..+
T Consensus 160 D~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 160 DRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp SSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 999999999999999888766666666554
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.78 E-value=3.1e-05 Score=77.81 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=67.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCceecc--cChhhHHHHH----HHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSG--VKPNEKKRFI----NELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~v~~~--~~p~~K~~~v----~~l~~~g~~v~~vGD 791 (932)
++.|++.+++++|++.|++++++||.+ ...+..+.+.+|+.. .|.. ..+..|.+.+ +.+.-....++||||
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD 145 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR--YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDD 145 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT--TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh--hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeC
Confidence 568999999999999999999999998 799999999999973 2222 1233443333 333334567999999
Q ss_pred CcccHHHHHhCCeeEE
Q 002354 792 GINDAAALASSHIGVA 807 (932)
Q Consensus 792 g~ND~~al~~A~vgIa 807 (932)
+.||+.+.+.|++...
T Consensus 146 ~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 146 ERRNIVDVSKLGVTCI 161 (187)
T ss_dssp CHHHHHHHHTTTCEEE
T ss_pred CccChHHHHHcCCEEE
Confidence 9999999999998643
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.3e-05 Score=83.96 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=76.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--Ccee-cc--cChhhH--HHHHHH-Hhh---CC--C
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVL-SG--VKPNEK--KRFINE-LQN---DE--N 784 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~--~~v~-~~--~~p~~K--~~~v~~-l~~---~g--~ 784 (932)
.+.+++.+.++.|++.|+++.++|+...........+ .|+.. +.++ +. ..+..| .++++. +++ .. .
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 191 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME 191 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGG
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcc
Confidence 5788999999999999999999999987665543322 34321 1222 22 112122 223332 223 23 7
Q ss_pred EEEEEcCCcccHHHHHhCC---eeEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 785 VVAMVGDGINDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~---vgIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
.+++|||+.||+.|.+.|+ ++++++++.+..+..||+++. ++..+
T Consensus 192 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 192 KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGC
T ss_pred eEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHh
Confidence 8999999999999999999 555667777778889999985 55544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.70 E-value=6.5e-05 Score=79.76 Aligned_cols=57 Identities=12% Similarity=0.202 Sum_probs=46.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- .+.+-++++++|++|+++|++++++|| ++........+++|++
T Consensus 6 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSSTTC----HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 46788888988753 366778999999999999999999988 7777777777788774
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.66 E-value=4.6e-05 Score=80.83 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=84.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.. +.+++. -.|+--..+.+.+.-....++||
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~v 184 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHV 184 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 36799999999999999999999987664 688889999852 122221 22333445556665566789999
Q ss_pred cCCc-ccHHHHHhCCeeEEecCchHH------HHhhcCEEEeCCChhHHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAMGGGVGA------ASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~~~~~~~------a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||+. ||+.|.+.|++++++.+.... ....+|+++. ++..+..+++.
T Consensus 185 GD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 185 GDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp ESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred CCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 9997 999999999999999632211 2236898884 77777777653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.2e-05 Score=72.76 Aligned_cols=102 Identities=16% Similarity=0.115 Sum_probs=73.0
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhh
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNE 771 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~ 771 (932)
.+.+..|+++ .-..++.|++.++++.|+++|++++++|+.+...+..+.+.+|+.. +.+++. -. |+-
T Consensus 4 ~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~ 79 (137)
T 2pr7_A 4 GLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAA 79 (137)
T ss_dssp EEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHH
T ss_pred EEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHH
Confidence 4555566655 1234578999999999999999999999999888888888888753 233321 22 222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
-..+.+.+.-....++||||+.+|+.+.+.+++-.
T Consensus 80 ~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 80 FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 23344444434457999999999999999999853
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00024 Score=71.32 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=70.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.| +++++|+.+......+.+.+|+.. +.++.. -.|+--..+.+.+.-....++||
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 164 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV 164 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence 36799999999999999 999999999999999999999852 223221 12333344555555556789999
Q ss_pred cCCcccHHHHHhCCeeEEecC
Q 002354 790 GDGINDAAALASSHIGVAMGG 810 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~ 810 (932)
||+.||+.|.+.|++...+-+
T Consensus 165 gD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 165 DDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp ESCHHHHHHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHCCCEEEEEC
Confidence 999999999999999987753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.49 E-value=7.6e-05 Score=75.72 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=70.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCC--Cceecc-----c--ChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL------VGIPK--DKVLSG-----V--KPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~--~~v~~~-----~--~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.++.|++ |++++++|+........+.+. +|+.. +.+++. . .|+--..+.+.+.-..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 467999999999999 999999999998888888887 68742 233321 1 2223344555555456
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCch
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGV 812 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~ 812 (932)
..+++|||+.||+.|.+.|+++.++.+..
T Consensus 168 ~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 168 EETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred HHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 78999999999999999999999987543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0004 Score=72.63 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--CceecccCh--hhHHHHHHHHhhCCCEEEEEcCCc-
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKP--NEKKRFINELQNDENVVAMVGDGI- 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~~p--~~K~~~v~~l~~~g~~v~~vGDg~- 793 (932)
.+.+++.+.++.|+ .|+++.++|+..........+.+|+.. +.+++.-.| +--..+.+.+.-....+++|||+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~ 190 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLR 190 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCch
Confidence 45799999999999 999999999999998999999999852 234443333 333445555555567899999999
Q ss_pred ccHHHHHhCCeeEEec-CchH--------HHHhhcCE-EEeCCChhHHHHHHH
Q 002354 794 NDAAALASSHIGVAMG-GGVG--------AASEVASV-VLMGNRLSQLLVALE 836 (932)
Q Consensus 794 ND~~al~~A~vgIa~~-~~~~--------~a~~~ad~-vl~~~~~~~i~~~i~ 836 (932)
||+.|.+.|++++++- .+.. .....+|+ ++ +++..+..+++
T Consensus 191 ~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 191 SDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp CCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred hhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 9999999999997763 2221 11245787 55 46887777664
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=8.4e-05 Score=78.44 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=41.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 757 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g 757 (932)
..+++..||+++- -+.++.+.+.++|++|+++|++++++||++... +.+.++
T Consensus 5 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~ 56 (246)
T 3f9r_A 5 VLLLFDVDGTLTP---PRLCQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLG 56 (246)
T ss_dssp EEEEECSBTTTBS---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHC
T ss_pred eEEEEeCcCCcCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhh
Confidence 5666667777652 244688999999999999999999999999885 455555
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00066 Score=69.10 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=80.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cc------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.. +.++ +. -.|+-=....+.+.-..+.++||
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEE
Confidence 457899999999999999999999999999999999999863 1121 11 22333345556665566789999
Q ss_pred cCCcccHHHHHhCCee-E-Ee--c-CchHHHHhh-cCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIG-V-AM--G-GGVGAASEV-ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-I-a~--~-~~~~~a~~~-ad~vl~~~~~~~i~~~i~ 836 (932)
||..+|+.+-+.|++. | ++ | +..+...++ ++.+. +...+.+.++
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~---~~~eli~~l~ 213 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV---KPEEILNVLK 213 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE---CGGGHHHHHH
T ss_pred ecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC---CHHHHHHHHH
Confidence 9999999999999985 2 23 3 333444444 45554 2444555443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00031 Score=72.34 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=66.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCcee-ccc------------Ch
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVL-SGV------------KP 769 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~v~-~~~------------~p 769 (932)
.++.|++.+++++|+++|++++++|+... ..+..+.+++|+..+.++ +.. ..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~ 134 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 134 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCc
Confidence 46789999999999999999999999887 678888999997533433 311 11
Q ss_pred hhH------HHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 770 NEK------KRFINELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 770 ~~K------~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
..| ..+.+.+.-....++||||+.||+.+.+.|++..
T Consensus 135 ~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 112 2333444444567999999999999999999864
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0014 Score=66.42 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=75.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-c----Ch--hhHHHHHHHHhhCC-CEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-V----KP--NEKKRFINELQNDE-NVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-~----~p--~~K~~~v~~l~~~g-~~v~~vG 790 (932)
++.|++.++++.|+++|+++.++||.....+..+.+ ...+.+++. - .| +--....+.+.-.. ..++|||
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VG 112 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLIS 112 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEe
Confidence 467999999999999999999999999888766554 212234332 1 22 21123333333222 5699999
Q ss_pred CCcccHHHHHhCCe-eEEecCch--------------------------HH-HHhhcCEEEeCCChhHHHHHHH
Q 002354 791 DGINDAAALASSHI-GVAMGGGV--------------------------GA-ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 791 Dg~ND~~al~~A~v-gIa~~~~~--------------------------~~-a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|..+|+.+-+.|++ .|++..+. +. ....+|+++ +++..+..++.
T Consensus 113 Ds~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 113 GDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI--DHLGELESCLA 184 (196)
T ss_dssp SCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe--CCHHHHHHHHH
Confidence 99999999999998 45564321 01 123589888 46887777654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00068 Score=69.40 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=76.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++. +++.++|+.+.. .+.+|+.. +.+++. -.|+--..+.+.+.-....++||
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV 178 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence 4678999999999998 999999987654 35667642 222221 12222344555555556789999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---c-CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAM---G-GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~---~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+++.++ + +..+. ...+|+++. ++..+.++++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 179 GDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred eCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 9997 999999999999887 2 22223 667899884 7888877764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.18 E-value=8.9e-05 Score=74.78 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=66.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--Cceecc-----c--ChhhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVLSG-----V--KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~--~~v~~~-----~--~p~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.|++.|++++++|+.+......+.+. +|+.. +.+++. . .|+--..+.+.+.-....++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 5689999999999999999999998776654443333 34321 133321 1 233344555666555678999
Q ss_pred EcCCcccHHHHHhCCeeEEecCchH
Q 002354 789 VGDGINDAAALASSHIGVAMGGGVG 813 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~~~~~~ 813 (932)
|||+.||+.|.+.|++...+.+..+
T Consensus 171 vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 171 FDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp EESCHHHHHHHHTTTCEEEECCSTT
T ss_pred eCCCHHHHHHHHHcCCeEEEecCCc
Confidence 9999999999999999988764433
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.001 Score=70.33 Aligned_cols=114 Identities=16% Similarity=0.202 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cce-eccc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSGV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v-~~~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++ ++++.++|+.+...+..+.+.+|+.. +.+ .+.. . |+--..+.+.+.-....++||
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v 199 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 199 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 567999999999998 59999999999999999999999852 222 2222 1 222244445555456789999
Q ss_pred cCC-cccHHHHHhCCe--eEEecCchH---HHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDG-INDAAALASSHI--GVAMGGGVG---AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg-~ND~~al~~A~v--gIa~~~~~~---~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||. .||+.+-+.|++ .|.+..+.. .....+|+++. ++..+..++
T Consensus 200 GDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 200 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred CCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 995 999999999999 677754321 12345888874 677776655
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0011 Score=74.23 Aligned_cols=115 Identities=21% Similarity=0.291 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--C--ceecc----------------cChhhHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D--KVLSG----------------VKPNEKKRFINE 778 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~--~v~~~----------------~~p~~K~~~v~~ 778 (932)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. + .+++. -.|.- .-+...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P-~~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNP-FSYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTST-HHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCH-HHHHHH
Confidence 678999999999999999999999999999999999999863 1 33331 12211 112223
Q ss_pred Hhh-----------------CCCEEEEEcCCcccHHHHHhCCee-EEecCch------HHH-HhhcCEEEeCCChhHHHH
Q 002354 779 LQN-----------------DENVVAMVGDGINDAAALASSHIG-VAMGGGV------GAA-SEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 779 l~~-----------------~g~~v~~vGDg~ND~~al~~A~vg-Ia~~~~~------~~a-~~~ad~vl~~~~~~~i~~ 833 (932)
+++ ....++||||+.+|+.+-++|++. |.+..+. +.. ...+|+++. ++..+..
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~--sl~eL~~ 371 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRG 371 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEEC--CHHHHHH
Confidence 333 236799999999999999999986 4444331 222 346899884 6887776
Q ss_pred HHH
Q 002354 834 ALE 836 (932)
Q Consensus 834 ~i~ 836 (932)
+++
T Consensus 372 ~l~ 374 (384)
T 1qyi_A 372 VLD 374 (384)
T ss_dssp HHS
T ss_pred HHH
Confidence 654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0016 Score=68.97 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=47.6
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
....+.+..||+++- .+++.+++.+++++|+++|++++++| |+.........+++|++
T Consensus 16 ~~~~v~~DlDGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 16 KIELFILDMDGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp GCCEEEECCBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCCEEEEcCcCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 345677778888763 26778999999999999999999999 88888887777777764
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00047 Score=71.02 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=71.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCCC--Cceecc-------cChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA------SLVGIPK--DKVLSG-------VKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia------~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.++.|++. +++.++|+.+......+. +.+|+.. +.+++. -.|+--..+.+.+.-..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 3569999999999999 999999999998888766 4456531 123221 22333345556665566
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~ 816 (932)
..++||||+.||+.|.+.|+++.++.+..+..+
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 789999999999999999999998875544333
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0002 Score=76.08 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=48.2
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcccHHHHHhCC-eeEEecCchHHHHhhcCEEEeCCCh
Q 002354 771 EKKRFINEL-QNDENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVASVVLMGNRL 828 (932)
Q Consensus 771 ~K~~~v~~l-~~~g~~v~~vGD----g~ND~~al~~A~-vgIa~~~~~~~a~~~ad~vl~~~~~ 828 (932)
+|..-++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+.+++.||+|+.+++-
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC--
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcC
Confidence 587777777 112468999999 999999999999 6999999999999999999876553
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0007 Score=71.45 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=66.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCC---ceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPKD---KVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~---~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
.++.|++.+.++.|++.|+++.++||++. ..+....+++||+.. .++-+-....|....+.+++.| ..|++|
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~i 179 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFV 179 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEE
Confidence 46788999999999999999999999965 477788889999741 3554434567888888888854 578999
Q ss_pred cCCcccHHH
Q 002354 790 GDGINDAAA 798 (932)
Q Consensus 790 GDg~ND~~a 798 (932)
||..+|.++
T Consensus 180 GD~~~Dl~~ 188 (260)
T 3pct_A 180 GDNLNDFGD 188 (260)
T ss_dssp ESSGGGGCG
T ss_pred CCChHHcCc
Confidence 999999876
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0019 Score=68.28 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=45.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- -...+ ++++++|++++++|++++++| |++........+++|+.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 5 YKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45677777887653 23445 899999999999999999999 88888888888888874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00058 Score=72.17 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=66.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCC-C--ceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPK-D--KVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~-~--~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
+++.|++.+.++.|++.|++++++||++. ..+..-.+++||+. + .++-+-....|....+.+.+.| ..|++|
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~v 179 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYV 179 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEEE
Confidence 56789999999999999999999999865 47777888999984 2 5555544467888888888874 578999
Q ss_pred cCCcccHHH
Q 002354 790 GDGINDAAA 798 (932)
Q Consensus 790 GDg~ND~~a 798 (932)
||..+|.++
T Consensus 180 GD~~~Dl~~ 188 (262)
T 3ocu_A 180 GDNLDDFGN 188 (262)
T ss_dssp ESSGGGGCS
T ss_pred CCChHHhcc
Confidence 999999865
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0038 Score=65.40 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=77.6
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-------ccChhhHHHHHHHHhhCCCEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-------GVKPNEKKRFINELQNDENVVA 787 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-------~~~p~~K~~~v~~l~~~g~~v~ 787 (932)
..++.|++.+.++.|++.|+++.+.|... .+..+.+.+|+.. +.+++ .-.|+-=....+.+.-..+.++
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 34678999999999999999998877654 3567788899853 12221 1223333455666665667899
Q ss_pred EEcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 788 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
||||..+|+.+-+.|++ .|++++..+ ...||+++. ++..+
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEES--SGGGC
T ss_pred EECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEEC--ChHhC
Confidence 99999999999999998 566764433 246899885 55554
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0021 Score=70.45 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=74.9
Q ss_pred EEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCceeccc---------------------
Q 002354 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGV--------------------- 767 (932)
Q Consensus 713 ~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~v~~~~--------------------- 767 (932)
.-.....+.++.++.++.|+++|++|+|+||-+...++.+|.. .||++++|++-.
T Consensus 137 ~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg 216 (327)
T 4as2_A 137 LDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEG 216 (327)
T ss_dssp EEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTT
T ss_pred ccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccc
Confidence 3345567899999999999999999999999999999999998 588887776521
Q ss_pred ---------------------ChhhHHHHHHHHhhCC-CEEEEEcCC-cccHHHHHh--CCeeEEe
Q 002354 768 ---------------------KPNEKKRFINELQNDE-NVVAMVGDG-INDAAALAS--SHIGVAM 808 (932)
Q Consensus 768 ---------------------~p~~K~~~v~~l~~~g-~~v~~vGDg-~ND~~al~~--A~vgIa~ 808 (932)
.-+.|...|+....+| ..++++||+ ..|.+||.. ++.|+.+
T Consensus 217 ~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 217 KYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 1245888887765444 468999999 589999965 4444444
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0005 Score=72.14 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=42.3
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcccHHHHHhCCe-eEEecCchHHHHhhcCEE
Q 002354 771 EKKRFINEL-QNDENVVAMVGD----GINDAAALASSHI-GVAMGGGVGAASEVASVV 822 (932)
Q Consensus 771 ~K~~~v~~l-~~~g~~v~~vGD----g~ND~~al~~A~v-gIa~~~~~~~a~~~ad~v 822 (932)
+|..-++.| .-....|+++|| +.||.+||+.|+. |++|+|+.+.+|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 576666666 223468999999 9999999999988 999999999999999876
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00065 Score=67.55 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=66.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCcee-c-----cc----Chh--h
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-S-----GV----KPN--E 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~v~-~-----~~----~p~--~ 771 (932)
++.|++.++++.|+++|++++++|+. ....+..+.+.+|+..+.++ + .- .|+ -
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~ 121 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 121 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSCGG
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCcccccccCCCHHH
Confidence 57899999999999999999999987 46778889999999744443 3 11 121 1
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee-EEecCc
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIG-VAMGGG 811 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg-Ia~~~~ 811 (932)
=..+.+.+.-....++||||..+|+.+-+.|++- |.+..+
T Consensus 122 ~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 122 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 1222334433456799999999999999999986 444433
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.016 Score=60.42 Aligned_cols=61 Identities=10% Similarity=0.017 Sum_probs=46.1
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
...+.+..||+++---.-.+.+.+.+.++++.+++.|+++.++| |++........+++|++
T Consensus 12 ~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp CCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 46777888887763100023366888999999999999999999 99988888877777763
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0008 Score=69.56 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=76.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc--ChhhHHHHHHHHh--hCCCEEEEEcCCc
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEKKRFINELQ--NDENVVAMVGDGI 793 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~--~p~~K~~~v~~l~--~~g~~v~~vGDg~ 793 (932)
-++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+.. .|... ....|..+++.+. -....++||||+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~--~f~~~~~~~~~K~~~~~~~~~~~~~~~~~~vgDs~ 171 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD--EVEGRVLIYIHKELMLDQVMECYPARHYVMVDDKL 171 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH--HTTTCEEEESSGGGCHHHHHHHSCCSEEEEECSCH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH--hcCeeEEecCChHHHHHHHHhcCCCceEEEEcCcc
Confidence 367899999999999999 999999999999999999999842 11110 1123333333333 3457899999999
Q ss_pred c---cHHHHHhCCee-EEecCc-----hHHHHhh--cCEEEeCCChhHHHHHH
Q 002354 794 N---DAAALASSHIG-VAMGGG-----VGAASEV--ASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 794 N---D~~al~~A~vg-Ia~~~~-----~~~a~~~--ad~vl~~~~~~~i~~~i 835 (932)
| |..+-+.|++- |.+..+ .+..++. +|+++. ++..+..++
T Consensus 172 ~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 172 RILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred chhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 9 66666778865 344332 2233343 898884 566655443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0055 Score=66.15 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=69.2
Q ss_pred ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCCCCceecc------cChhhHHHHHHH
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA---EYVASL--------VGIPKDKVLSG------VKPNEKKRFINE 778 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~v~~~------~~p~~K~~~v~~ 778 (932)
.++++.|++.++++.|+++|+++.++||.+...+ ...-+. +|+..+.++.. -.|+-|..+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCCcHHHHHHHHHHHH
Confidence 4567899999999999999999999999985432 344445 78854444432 224556667777
Q ss_pred HhhCCCE-EEEEcCCcccHHHHHhCCee-EEecCc
Q 002354 779 LQNDENV-VAMVGDGINDAAALASSHIG-VAMGGG 811 (932)
Q Consensus 779 l~~~g~~-v~~vGDg~ND~~al~~A~vg-Ia~~~~ 811 (932)
+...... ++||||..+|+.|-+.|++- |++..|
T Consensus 265 ~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 7544434 68999999999999999986 444333
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0034 Score=66.51 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=54.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC--C--CceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIP--K--DKVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~--~--~~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
.++.|++.++|+.|++.|+++.++||+. ........+.+|+. . +.+.+.-.+ .|......+.+.+ ..++||
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-~K~~~~~~~~~~~~~~~l~V 178 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-KGKEKRRELVSQTHDIVLFF 178 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-CSSHHHHHHHHHHEEEEEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-CCcHHHHHHHHhCCCceEEe
Confidence 4678999999999999999999999998 44555666788987 1 233332211 1211222222222 358899
Q ss_pred cCCcccHHHH
Q 002354 790 GDGINDAAAL 799 (932)
Q Consensus 790 GDg~ND~~al 799 (932)
||..||+.+-
T Consensus 179 GDs~~Di~aA 188 (258)
T 2i33_A 179 GDNLSDFTGF 188 (258)
T ss_dssp ESSGGGSTTC
T ss_pred CCCHHHhccc
Confidence 9999998765
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.015 Score=57.38 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHHhc---ccCCCcHHHHHHHHHHhcCCccccccCCCeEEec---CCeeEEE-E---cCe--EEEeecH
Q 002354 608 HPLSETEILKFAAGVE---SNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP---GSGTVAI-I---EDR--KVSVGTI 675 (932)
Q Consensus 608 ~~~~~~~ll~laa~~e---~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~---g~g~~~~-i---~~~--~~~~Gs~ 675 (932)
.+.++++++.+++... ....+|++.||++++...+............++| .+..+.+ + ++. .++||++
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 3455677888776554 3467999999998765422110000111122222 2333322 2 122 4899999
Q ss_pred HHHhhcCCCCc---------------hhhhHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccc
Q 002354 676 DWLRSHGVDTS---------------TFQEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDR 719 (932)
Q Consensus 676 ~~i~~~~~~~~---------------~~~~~~~~~~~g~~~~~va~----------------~~~~lG~i~l~D~ 719 (932)
+.+.+.|.... .....+.+..+|.+++.+++ |++|+|+++|-|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 99999886320 01122336778999999885 5689999999885
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0097 Score=61.10 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=35.5
Q ss_pred HHHHHhhCCCEEEEEcCC-cccHHHHHhCCeeEEe---cCch-HHHH---hhcCEEEe
Q 002354 775 FINELQNDENVVAMVGDG-INDAAALASSHIGVAM---GGGV-GAAS---EVASVVLM 824 (932)
Q Consensus 775 ~v~~l~~~g~~v~~vGDg-~ND~~al~~A~vgIa~---~~~~-~~a~---~~ad~vl~ 824 (932)
+.+.+.-....+++|||+ .||++|++.|++++++ |++. +..+ ..+|+++.
T Consensus 185 ~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 185 ALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 334444345689999999 7999999999999554 4433 3333 46898885
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0099 Score=60.61 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.. +.+++ ......| ..+.+.+.-. . +||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~--~-~~v 170 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP--A-VHV 170 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSS--E-EEE
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC--e-EEE
Confidence 4679999999999999999999998766 5788889999852 22222 1111122 2233333322 2 999
Q ss_pred cCCcc-cHHHHHhCCeeEEe
Q 002354 790 GDGIN-DAAALASSHIGVAM 808 (932)
Q Consensus 790 GDg~N-D~~al~~A~vgIa~ 808 (932)
||+.+ |+.+.+.|++....
T Consensus 171 gD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 171 GDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp ESSCCCCCCCSSSCSEEEEE
T ss_pred cCCchHhHHHHHHCCCeEEE
Confidence 99999 99999999998554
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.028 Score=58.44 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=72.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-c------cChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G------VKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~------~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|+++|+++.++|.... +..+-+.+|+... .+.+ . -.|+-=....+.+.-..+.++|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~ 171 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG 171 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence 45789999999999999999999997653 4567788998531 1111 1 1233334555666666778999
Q ss_pred EcCCcccHHHHHhCCee-EEecCchHHHHhhcCEEEe
Q 002354 789 VGDGINDAAALASSHIG-VAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~~~~~a~~~ad~vl~ 824 (932)
|||..+|+.+-++|++- |++..|. ..+|.++.
T Consensus 172 VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 172 IEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 99999999999999975 5665442 34677664
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.045 Score=57.72 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=73.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--Cceecc---cCh--hhHHHHHHHHhhCCCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVLSG---VKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~---gi~~--~~v~~~---~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
-++.|++.++++.|+++|+++.++|..+...+..+-+.+ |+.. +.+++. -.| +-=..+.+.+.-....++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~~l 208 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 208 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 367899999999999999999999999888888877744 4642 233322 122 222344555555567899
Q ss_pred EEcCCcccHHHHHhCCee-EEecC-c--h-HHHHhhcCEEEe
Q 002354 788 MVGDGINDAAALASSHIG-VAMGG-G--V-GAASEVASVVLM 824 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg-Ia~~~-~--~-~~a~~~ad~vl~ 824 (932)
||||..+|+.+-+.|++- |.+.. + . +.....+|.++.
T Consensus 209 ~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 209 FLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred EEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 999999999999999986 44421 1 1 122345777764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.35 E-value=0.01 Score=60.68 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=56.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHcCCCC---Cc-eecccChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY----VASLVGIPK---DK-VLSGVKPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~----ia~~~gi~~---~~-v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
+.+++.+.++.|+++|+++.++|+.+...+.. +.+..+... +. .+....|.- ..+.+.+++.|. ++||||
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p-~~~~~~~~~~g~-~l~VGD 166 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQ-NTKSQWLQDKNI-RIFYGD 166 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTC-CCSHHHHHHTTE-EEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccchhhhcCCCCCH-HHHHHHHHHCCC-EEEEEC
Confidence 46799999999999999999999986543333 333344320 00 122223321 122333444454 999999
Q ss_pred CcccHHHHHhCCee-EEec
Q 002354 792 GINDAAALASSHIG-VAMG 809 (932)
Q Consensus 792 g~ND~~al~~A~vg-Ia~~ 809 (932)
..+|+.+-+.|++- |.+.
T Consensus 167 s~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 167 SDNDITAARDVGARGIRIL 185 (211)
T ss_dssp SHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHCCCeEEEEe
Confidence 99999999999986 4443
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=94.10 E-value=0.13 Score=59.25 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=62.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHcCCCCCceecc-------cChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD------KKNSAEYVASLVGIPKDKVLSG-------VKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd------~~~~a~~ia~~~gi~~~~v~~~-------~~p~~K~~~v~~l~~~g~~ 785 (932)
++.|++.++++.|+++|+++.++|+. ...........+.-..+.+++. -.|+-=..+.+.+.-....
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~ 179 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 179 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChhH
Confidence 57899999999999999999999985 3333332222222112233321 2233334555566556678
Q ss_pred EEEEcCCcccHHHHHhCCeeEEec
Q 002354 786 VAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
++||||..||+.+.+.|++....-
T Consensus 180 ~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 180 VVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEC
T ss_pred EEEECCcHHHHHHHHHcCCEEEEE
Confidence 999999999999999999986664
|
| >2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C | Back alignment and structure |
|---|
Probab=93.23 E-value=0.016 Score=64.37 Aligned_cols=15 Identities=7% Similarity=-0.234 Sum_probs=0.0
Q ss_pred ccccccccccccccc
Q 002354 63 HIRCRLECMSSCAAS 77 (932)
Q Consensus 63 ~~~~~~~~~~~~~~~ 77 (932)
+-++|--+-++.+.+
T Consensus 265 ~~~~~~~~~~~~s~~ 279 (358)
T 2pk2_A 265 KKTKADDRGTDEKTS 279 (358)
T ss_dssp ---------------
T ss_pred cCCcccCcccccccc
Confidence 344555565544333
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.01 E-value=0.0017 Score=65.27 Aligned_cols=80 Identities=13% Similarity=0.156 Sum_probs=59.8
Q ss_pred ccccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCccc-
Q 002354 718 DRIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND- 795 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND- 795 (932)
-++.|++.++++.|+++ |+++.++|+.+...+..+.+.+|+ .+.+++ + +..+.+.-....++||||+.+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~---~----~~~~~~~~~~~~~~~vgDs~~dD 143 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLG---P----QFVERIILTRDKTVVLGDLLIDD 143 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHC---H----HHHTTEEECSCGGGBCCSEEEES
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcC---H----HHHHHcCCCcccEEEECCchhhC
Confidence 35789999999999999 999999999988888888888887 333332 1 1333333345678999999999
Q ss_pred ---HHHHH-hCCee
Q 002354 796 ---AAALA-SSHIG 805 (932)
Q Consensus 796 ---~~al~-~A~vg 805 (932)
+.+-+ .|++-
T Consensus 144 ~~~i~~A~~~aG~~ 157 (193)
T 2i7d_A 144 KDTVRGQEETPSWE 157 (193)
T ss_dssp SSCCCSSCSSCSSE
T ss_pred cHHHhhcccccccc
Confidence 66555 66654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=92.84 E-value=0.19 Score=53.97 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=67.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHH--------------HHHHHHHcCCCCCceec-ccChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNS--------------AEYVASLVGIPKDKVLS-GVKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~--------------a~~ia~~~gi~~~~v~~-~~~p~~K~~~v~~l~~~g 783 (932)
...+++.++++.|++.|+ +.++|...... ...+....+.+ .+.. .-.|+-=..+.+.+.-..
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--ALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--CEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--ceeeCCCCHHHHHHHHHHcCCCh
Confidence 457899999999999999 77887654321 12222223332 2211 112222222333333334
Q ss_pred CEEEEEcCCc-ccHHHHHhCCeeEEe---cC-chHHHH---------hhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGI-NDAAALASSHIGVAM---GG-GVGAAS---------EVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~-ND~~al~~A~vgIa~---~~-~~~~a~---------~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++||||+. ||+.|.+.|++...+ |. ..+... ..+|+++. ++..+..+++
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l~ 297 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGLE 297 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC-
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHHH
Confidence 6799999996 999999999998776 32 222222 35898884 6776665544
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.74 E-value=0.03 Score=58.19 Aligned_cols=108 Identities=11% Similarity=0.085 Sum_probs=65.4
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-------------HHcCCCCCceecccChhhHHHHHHHHhh----C
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA-------------SLVGIPKDKVLSGVKPNEKKRFINELQN----D 782 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-------------~~~gi~~~~v~~~~~p~~K~~~v~~l~~----~ 782 (932)
..+++.+.++.|+ .|+++ ++|+.......... ...+.. .+.. -.| |...++.+.+ .
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~Kp--~~~~~~~~~~~lgi~ 195 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTK--AMVV-GKP--EKTFFLEALRDADCA 195 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCC--CEEC-STT--SHHHHHHHGGGGTCC
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCC--ceEe-cCC--CHHHHHHHHHHcCCC
Confidence 6789999999999 89998 88876543221111 112221 2211 122 3334443332 3
Q ss_pred CCEEEEEcCCc-ccHHHHHhCCeeEE-ecCc---hHHH---HhhcCEEEeCCChhHHHHHHH
Q 002354 783 ENVVAMVGDGI-NDAAALASSHIGVA-MGGG---VGAA---SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 783 g~~v~~vGDg~-ND~~al~~A~vgIa-~~~~---~~~a---~~~ad~vl~~~~~~~i~~~i~ 836 (932)
...++||||+. ||+.|.+.|++-.. +..| .+.. ...+|+++ +++..+..++.
T Consensus 196 ~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l~ 255 (259)
T 2ho4_A 196 PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHIL 255 (259)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHHH
T ss_pred hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHHH
Confidence 45799999998 99999999998643 3333 1111 23578887 47777766543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=92.55 E-value=0.1 Score=59.14 Aligned_cols=108 Identities=15% Similarity=0.212 Sum_probs=70.9
Q ss_pred CeEEEEEECCEEEEEE----Ee---cc--cccHHHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcC
Q 002354 699 QSLVYVGVDNMLAGLI----YV---ED--RIRDDAAHVVNSLSSQGIGVYMLSGDK------------KNSAEYVASLVG 757 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i----~l---~D--~lr~~~~~~i~~L~~~Gi~v~~~TGd~------------~~~a~~ia~~~g 757 (932)
...+++..||+++--- .. .| .+-|++.++|+.|+++|++++++|+.+ ...+..+.+.+|
T Consensus 58 ~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lg 137 (416)
T 3zvl_A 58 GKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLG 137 (416)
T ss_dssp SSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcC
Confidence 4566777777765321 00 00 257999999999999999999999855 223778889999
Q ss_pred CCCCceeccc-----Chh--hHHHHHHHHh----hCCCEEEEEcCCc-----------------ccHHHHHhCCeeE
Q 002354 758 IPKDKVLSGV-----KPN--EKKRFINELQ----NDENVVAMVGDGI-----------------NDAAALASSHIGV 806 (932)
Q Consensus 758 i~~~~v~~~~-----~p~--~K~~~v~~l~----~~g~~v~~vGDg~-----------------ND~~al~~A~vgI 806 (932)
+..+.+++.- .|. -=..+.+.+. -....++||||.. +|..+-+.|++-.
T Consensus 138 l~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 138 VPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp SCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 8654444421 221 1122333332 2235799999997 6888888887764
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=91.36 E-value=0.29 Score=51.35 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=61.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc--C-------------CCCCceec----ccCh--hhHHHHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV--G-------------IPKDKVLS----GVKP--NEKKRFI 776 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~--g-------------i~~~~v~~----~~~p--~~K~~~v 776 (932)
-++.|++.++++. |+++.++|..+...+..+-+.+ | ++ .+|. +..| +-=..+.
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~--~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHHCCTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc--eEEeeeccCCCCCHHHHHHHH
Confidence 3567899998888 9999999999999888888877 5 33 3332 2233 2223445
Q ss_pred HHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 777 NELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 777 ~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+.+.-....++||||..+|+.+-++|++-.
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 555555678999999999999999999864
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.38 E-value=0.49 Score=49.23 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=63.9
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCC
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN-------------SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDE 783 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~-------------~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g 783 (932)
...+.+++.++++.|+ .|+++ ++|..+.. -...+...++... .....-.|+-=..+.+.+.-..
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~-~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKP-VYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCC-EECSTTSHHHHHHHHHHHCSCG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCc-cccCCCCHHHHHHHHHHcCCCH
Confidence 4567899999999997 89987 77765441 1122222333221 1112222333334445554455
Q ss_pred CEEEEEcCC-cccHHHHHhCCee-EEe--cCchH-HHHh---hcCEEEe
Q 002354 784 NVVAMVGDG-INDAAALASSHIG-VAM--GGGVG-AASE---VASVVLM 824 (932)
Q Consensus 784 ~~v~~vGDg-~ND~~al~~A~vg-Ia~--~~~~~-~a~~---~ad~vl~ 824 (932)
..++||||+ .||+.+.+.|++. |.+ |.+.. ..++ .+|+++.
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 789999999 6999999999987 333 43322 2232 5898884
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.30 E-value=0.51 Score=44.80 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=47.0
Q ss_pred eEEEEEECCEEEEEEEecc-----cccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCCCceecccChh
Q 002354 700 SLVYVGVDNMLAGLIYVED-----RIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPKDKVLSGVKPN 770 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D-----~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~~~v~~~~~p~ 770 (932)
..+++..||+++- .+ +..+++.++|++|+++|++++++||++ ...+....++.|++...+ +.-.|+
T Consensus 4 k~i~~DlDGTL~~----~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I-~~n~P~ 77 (142)
T 2obb_A 4 MTIAVDFDGTIVE----HRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA-NKDYPE 77 (142)
T ss_dssp CEEEECCBTTTBC----SCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE-SSSSTT
T ss_pred eEEEEECcCCCCC----CCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE-EcCCch
Confidence 3556666666543 22 245799999999999999999999998 566777788888864333 333354
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=87.22 E-value=0.008 Score=60.48 Aligned_cols=83 Identities=12% Similarity=0.096 Sum_probs=57.8
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCccc--
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND-- 795 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND-- 795 (932)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+.. ..|. ....+.+.-....++||||..+|
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~-~~f~-------~~~~~~l~~~~~~~~~vgDs~~dD~ 146 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE-KYFG-------PDFLEQIVLTRDKTVVSADLLIDDR 146 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH-HHHC-------GGGGGGEEECSCSTTSCCSEEEESC
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH-Hhch-------HHHHHHhccCCccEEEECcccccCC
Confidence 5789999999999999 99999999988877777777777641 0221 11222222235668899999999
Q ss_pred --HHHHH-hCCee-EEec
Q 002354 796 --AAALA-SSHIG-VAMG 809 (932)
Q Consensus 796 --~~al~-~A~vg-Ia~~ 809 (932)
..+-+ .|++- |.+.
T Consensus 147 ~~~~~a~~~aG~~~i~~~ 164 (197)
T 1q92_A 147 PDITGAEPTPSWEHVLFT 164 (197)
T ss_dssp SCCCCSCSSCSSEEEEEC
T ss_pred chhhhcccCCCceEEEec
Confidence 76655 66654 3443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.63 E-value=0.58 Score=48.87 Aligned_cols=96 Identities=14% Similarity=0.216 Sum_probs=63.5
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCCC--CceecccChhhHHHH
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL---VGIPK--DKVLSGVKPNEKKRF 775 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~---~gi~~--~~v~~~~~p~~K~~~ 775 (932)
.+++..|++++- .+..-+++.+++++|++.|++++++||+...+...+.++ +|++. +.+++.. . ..
T Consensus 3 ~i~~D~DGtL~~----~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~--~---~~ 73 (263)
T 1zjj_A 3 AIIFDMDGVLYR----GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG--L---AT 73 (263)
T ss_dssp EEEEECBTTTEE----TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH--H---HH
T ss_pred EEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH--H---HH
Confidence 456667777653 344457899999999999999999999988777776665 57752 1333211 1 22
Q ss_pred HHHHhh--CCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 776 INELQN--DENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 776 v~~l~~--~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+..+++ .+..+..+|+. .+...++..++.+
T Consensus 74 ~~~l~~~~~~~~v~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 74 RLYMSKHLDPGKIFVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp HHHHHHHSCCCCEEEESCH-HHHHHHHHHTSCB
T ss_pred HHHHHHhCCCCEEEEEcCH-HHHHHHHHcCCee
Confidence 223332 34678899985 6667777666543
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=85.76 E-value=1.8 Score=42.11 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=61.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC---CHH---HHHHHHHHcCCCC--CceecccChhhHHHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD---KKN---SAEYVASLVGIPK--DKVLSGVKPNEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd---~~~---~a~~ia~~~gi~~--~~v~~~~~p~~K~~~v~~l~~~g~~v~~vG 790 (932)
++.|++.++++.|++. +++.++|+. +.. +...+.+.++... +.+++.-. .| + ..++|||
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~--~~------l----~~~l~ie 135 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK--NI------I----LADYLID 135 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG--GG------B----CCSEEEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc--Ce------e----cccEEec
Confidence 5789999999999985 999999987 321 1223444455421 23443321 11 1 3479999
Q ss_pred CCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 791 DGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
|..+|+. +.|+-.|++..+... ...++.++ +++..+..++
T Consensus 136 Ds~~~i~--~aaG~~i~~~~~~~~-~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 136 DNPKQLE--IFEGKSIMFTASHNV-YEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp SCHHHHH--HCSSEEEEECCGGGT-TCCSSEEE--CSHHHHHHHH
T ss_pred CCcchHH--HhCCCeEEeCCCccc-CCCCceec--CCHHHHHHHH
Confidence 9999985 567766666533221 13466666 4677776655
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.01 E-value=4.8 Score=41.68 Aligned_cols=110 Identities=11% Similarity=0.066 Sum_probs=65.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCC
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKN-------------SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN 784 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~-------------~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~ 784 (932)
....+++.++++.|+ +|+++ ++|..... -...+...++-.. .....-.|+-=....+. -...
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEP-IIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC-EECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCc-cEecCCCHHHHHHHHHh--CCcc
Confidence 456789999999999 89988 77754331 1223333444331 11222222222222333 4567
Q ss_pred EEEEEcCCc-ccHHHHHhCCee-EEecCc--h-HHHHh---hcCEEEeCCChhHHHHH
Q 002354 785 VVAMVGDGI-NDAAALASSHIG-VAMGGG--V-GAASE---VASVVLMGNRLSQLLVA 834 (932)
Q Consensus 785 ~v~~vGDg~-ND~~al~~A~vg-Ia~~~~--~-~~a~~---~ad~vl~~~~~~~i~~~ 834 (932)
.++||||.. +|+.+-+.|++. |.+..| . +...+ .+|+++. ++..+.+.
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~--~l~el~~~ 259 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLP--SVYELIDY 259 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEES--SGGGGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEEC--CHHHHHHH
Confidence 899999995 999999999986 555432 2 22222 5788884 56665543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=83.46 E-value=1.2 Score=48.92 Aligned_cols=99 Identities=12% Similarity=0.191 Sum_probs=69.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCC--CCceecccChhhH
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK----KNSAEYVASLVGIP--KDKVLSGVKPNEK 772 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~--~~~v~~~~~p~~K 772 (932)
...+.+..||++. -.+.+-|++.++++.|++.|++++++|+.. ...+..+.+.+|++ .++++....+-..
T Consensus 13 ~~~~l~D~DGvl~----~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~ 88 (352)
T 3kc2_A 13 KIAFAFDIDGVLF----RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS 88 (352)
T ss_dssp CEEEEECCBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG
T ss_pred CCEEEEECCCeeE----cCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH
Confidence 3455666666543 356777999999999999999999999875 44566666678985 3466655444322
Q ss_pred HHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 773 KRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 773 ~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
+ + +.+..|..+|-. .....++.+++-...
T Consensus 89 --~---~-~~~~~v~viG~~-~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 89 --L---V-NKYSRILAVGTP-SVRGVAEGYGFQDVV 117 (352)
T ss_dssp --G---T-TTCSEEEEESST-THHHHHHHHTCSEEE
T ss_pred --H---H-hcCCEEEEECCH-HHHHHHHhCCCeEec
Confidence 1 1 246789999975 667788888887664
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.31 E-value=0.22 Score=50.10 Aligned_cols=87 Identities=10% Similarity=0.075 Sum_probs=64.4
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh----hhHHHHHHHHhhC---CCEEEEEc
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP----NEKKRFINELQND---ENVVAMVG 790 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p----~~K~~~v~~l~~~---g~~v~~vG 790 (932)
=.+||++.+.++.|++. +++++.|.-....|..+.+.+++.. .+-.++.. ..|...++.++.- ...+++|+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~-~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS-CEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc-cEEEEEEcccceecCCceeeeHhHhCCChhHEEEEE
Confidence 35799999999999998 9999999999999999999999864 22222222 2243334444443 35799999
Q ss_pred CCcccHHHHHhCCeeE
Q 002354 791 DGINDAAALASSHIGV 806 (932)
Q Consensus 791 Dg~ND~~al~~A~vgI 806 (932)
|..++..+-..+++-|
T Consensus 145 Ds~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 145 NSPASYIFHPENAVPV 160 (195)
T ss_dssp SCGGGGTTCGGGEEEC
T ss_pred CCHHHhhhCccCccEE
Confidence 9999998766665554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=81.62 E-value=0.28 Score=48.69 Aligned_cols=86 Identities=9% Similarity=0.102 Sum_probs=63.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChh----hHHHHHHHHhhC---CCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPN----EKKRFINELQND---ENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~----~K~~~v~~l~~~---g~~v~~vGD 791 (932)
.+||++.+.++.|++. +++++.|.-....|..+.+.++... .+..++..+ .|...++.++.- ...+++|||
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 5799999999999998 9999999999999999999999863 222222221 233333444433 357999999
Q ss_pred CcccHHHHHhCCeeE
Q 002354 792 GINDAAALASSHIGV 806 (932)
Q Consensus 792 g~ND~~al~~A~vgI 806 (932)
..+|..+-..+++-|
T Consensus 133 s~~~~~~~~~ngi~i 147 (181)
T 2ght_A 133 SPASYVFHPDNAVPV 147 (181)
T ss_dssp CGGGGTTCTTSBCCC
T ss_pred CHHHhccCcCCEeEe
Confidence 999998766666655
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 932 | ||||
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-21 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-19 | |
| d1osda_ | 72 | d.58.17.1 (A:) Mercuric ion binding protein MerP { | 3e-13 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 5e-13 | |
| d2aw0a_ | 72 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 1e-12 | |
| d2ggpb1 | 72 | d.58.17.1 (B:1-72) Copper transporter domain ccc2a | 2e-12 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 4e-12 | |
| d1kvja_ | 79 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 8e-12 | |
| d1q8la_ | 84 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 1e-11 | |
| d1p6ta1 | 72 | d.58.17.1 (A:1-72) Potential copper-translocating | 6e-11 | |
| d2qifa1 | 69 | d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt | 6e-11 | |
| d1mwza_ | 73 | d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, | 6e-11 | |
| d1p6ta2 | 79 | d.58.17.1 (A:73-151) Potential copper-translocatin | 2e-10 | |
| d1cpza_ | 68 | d.58.17.1 (A:) Copper chaperone {Enterococcus hira | 2e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-10 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-10 | |
| d1qupa2 | 72 | d.58.17.1 (A:2-73) Copper chaperone for superoxide | 4e-09 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-07 | |
| d1sb6a_ | 64 | d.58.17.1 (A:) Copper chaperone {Synechocystis sp. | 3e-06 | |
| d1cc8a_ | 72 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 8e-06 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 8e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 6e-05 | |
| d1fe0a_ | 66 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 1e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 7e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.002 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.003 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.003 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 87.1 bits (215), Expect = 8e-21
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758
+ + V D D +++ A V L GI V M++GD SAE ++ + +
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 60
Query: 759 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 818
V P++K + +LQ E VVA VGDGINDA ALA + +G+A+G G A E
Sbjct: 61 DLVIA--EVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVGSGSDVAVES 117
Query: 819 ASVVLMGNRLSQLLVALE 836
+VL+ + L ++ A++
Sbjct: 118 GDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.9 bits (204), Expect = 6e-19
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 707 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------ 760
D D R + + GI V M++GD K +A + +GI
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 761 DKVLSG-----------------------VKPNEKKRFINELQNDENVVAMVGDGINDAA 797
D+ +G V+P+ K + + LQ+ + + AM GDG+NDA
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 798 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836
AL + IG+AMG G A + +VL + S ++ A+E
Sbjct: 128 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 166
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Score = 63.2 bits (154), Expect = 3e-13
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
++ + L V GMTC C +VK+ + VS V T A+V AK
Sbjct: 1 ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVT-FDDAKTSV----- 54
Query: 184 LGEALAKHLTSCGFKSSLR 202
+ L K G+ SS++
Sbjct: 55 --QKLTKATADAGYPSSVK 71
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 64.4 bits (156), Expect = 5e-13
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 607 IHPL--SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAI 664
+ PL E E+L+ AA E + HPI +AIV+ A + + G G VA
Sbjct: 5 LVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEK--VEVIAGEGVVA- 61
Query: 665 IEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQ--SLVYVGVDNMLAGLIYV 716
+ VG + GV S E+ +E L + + V V + + G+I V
Sbjct: 62 ---DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAV 112
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (150), Expect = 1e-12
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
++++ GMTC C S++ ++ +P V S V+L V P E
Sbjct: 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVE-YDPLLTSP-------ET 56
Query: 188 LAKHLTSCGFKSSLRD 203
L + GF ++L D
Sbjct: 57 LRGAIEDMGFDATLSD 72
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.9 bits (148), Expect = 2e-12
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
+IL V GMTC C ++ L + V+ ++L T V +V ++
Sbjct: 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQV--TYDNEVTA-------DS 54
Query: 188 LAKHLTSCGFKSSL 201
+ + + CGF +
Sbjct: 55 IKEIIEDCGFDCEI 68
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 62.4 bits (151), Expect = 4e-12
Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 606 PIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIE-----EPGSG 660
P + E + A P G++IV A+ +
Sbjct: 9 PAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 68
Query: 661 TVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMN------QSLVYVGVDNMLAGLI 714
+ I++R + G++D +R H +++ ++ + + V + + G+I
Sbjct: 69 SGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVI 128
Query: 715 YVEDRIR 721
++D ++
Sbjct: 129 ALKDIVK 135
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.5 bits (144), Expect = 8e-12
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
+ + V GMTC C ++++ + V V+L + A + P +
Sbjct: 10 VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII-YDPKLQTP-------KT 61
Query: 188 LAKHLTSCGFKSSLRD 203
L + + GF + + +
Sbjct: 62 LQEAIDDMGFDAVIHN 77
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (143), Expect = 1e-11
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGE 186
V+ + V GMTC C ++++ + V V+L + A + + E
Sbjct: 10 VLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------E 61
Query: 187 ALAKHLTSCGFKSSLRD 203
+ K + + GF + ++
Sbjct: 62 EMKKQIEAMGFPAFVKK 78
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 57.1 bits (138), Expect = 6e-11
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
I + V GMTC CAA +++ L+ P V+ A+VNL TET V A+ A
Sbjct: 8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVI-YDPAETGT-------AA 59
Query: 188 LAKHLTSCGFK 198
+ + + G+
Sbjct: 60 IQEKIEKLGYH 70
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Score = 56.7 bits (137), Expect = 6e-11
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
L V GM+C C +V+ + VS+ VNL V KV +
Sbjct: 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS-FDADKVSV-------KD 55
Query: 188 LAKHLTSCGFKSS 200
+A + G+ +
Sbjct: 56 IADAIEDQGYDVA 68
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 56.7 bits (137), Expect = 6e-11
Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 10/75 (13%)
Query: 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQ 183
S V GM C CA V+ + V+ V TE +V +
Sbjct: 1 SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV----------DADND 50
Query: 184 LGEALAKHLTSCGFK 198
+ + L G+
Sbjct: 51 IRAQVESALQKAGYS 65
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 55.7 bits (134), Expect = 2e-10
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEA 187
D+ GMTC CA +++ L V++A VN ET V + +
Sbjct: 4 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVE-YNPKEASV-------SD 55
Query: 188 LAKHLTSCGFKSSLRD 203
L + + G+K L+
Sbjct: 56 LKEAVDKLGYKLKLKG 71
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Score = 55.2 bits (133), Expect = 2e-10
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALA 189
V GM+C C A ++ + V V L E A+V +A V +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVK-FDEANVQA-------TEIC 55
Query: 190 KHLTSCGFKSSL 201
+ + G+++ +
Sbjct: 56 QAINELGYQAEV 67
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 59.2 bits (142), Expect = 3e-10
Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 28/220 (12%)
Query: 650 DGTFI---------EEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQS 700
DGT + ++D V T+ G E++ +
Sbjct: 12 DGTITMNDNIINIMKTFAPPEWMALKDG-VLSKTLSIKEGVGRMFGLLPSSLKEEITSFV 70
Query: 701 LVYVGVDNMLAGLI-----------YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA 749
L + + + + ++ + +
Sbjct: 71 LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNHASFDN 127
Query: 750 EYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 809
+Y+ S K I+EL + M+GD + D A S + A
Sbjct: 128 DYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187
Query: 810 GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNL 849
+ E L ++ +E +K V++ L
Sbjct: 188 YLLNECREQNLNHLPYQDFYEIRKEIE----NVKEVQEWL 223
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 55.9 bits (134), Expect = 4e-10
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 372 DAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRST---VDESSFTGEPLPVTKIP 428
+ S+ + + GD + V GD++PAD + + +ST VD+S TGE + V K
Sbjct: 8 ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHT 67
Query: 429 ESE-------------VAAGSINLNGTLTVEVRRPGGETAMGDIVRLV 463
E + +G+ G V G T +G I +
Sbjct: 68 EPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.7 bits (124), Expect = 4e-09
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 134 GMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLT 193
M C C +K L++ P ++S + ++ + V ++ V P + L
Sbjct: 13 PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV----ESSVAP-------STIINTLR 61
Query: 194 SCGFKSSLR 202
+CG + +R
Sbjct: 62 NCGKDAIIR 70
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 52.1 bits (124), Expect = 2e-07
Identities = 30/179 (16%), Positives = 50/179 (27%), Gaps = 48/179 (26%)
Query: 704 VGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG---- 757
+ G IY E R D+ ++N L G + + +G +G
Sbjct: 198 IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY 257
Query: 758 --------------------------------IPKDKVLSGVKPNEKKRFINELQNDENV 785
+ E + +++
Sbjct: 258 FEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDD 317
Query: 786 VAMVGDGINDAAALASSH---IGVAMG-GGVGAASEV----ASVVLMGNRLSQLLVALE 836
V +VGD + D + IG G G AA E+ A V+ N L +L L+
Sbjct: 318 VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Score = 43.4 bits (102), Expect = 3e-06
Identities = 10/51 (19%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIV-WPVSKAKVI 177
I L V + C CA +V + ++++ ++ V+LT++ + + + ++
Sbjct: 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLR 53
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.5 bits (100), Expect = 8e-06
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 134 GMTCGGCAASVKRILES-QPQVSSASVNLTTETAIV-WPVSKAKVI 177
MTC GC+ +V ++L +P VS ++L + V + ++
Sbjct: 11 VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFIL 56
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 45.1 bits (106), Expect = 8e-06
Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 6/125 (4%)
Query: 702 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 761
++ + G +RD + L I V +LSG + +GI
Sbjct: 21 LHYDAN----GEAIKSFHVRDGLG--IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF 74
Query: 762 KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASV 821
+ K + + A +GD D A A+ A+
Sbjct: 75 FLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDH 134
Query: 822 VLMGN 826
VL +
Sbjct: 135 VLSTH 139
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 36/204 (17%), Positives = 61/204 (29%), Gaps = 26/204 (12%)
Query: 650 DGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNM 709
D T I E G +A I + +V + G E L+ S V
Sbjct: 18 DSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQV----- 72
Query: 710 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769
+ + +V+ L + + V+++SG ++ E+VAS + IP V +
Sbjct: 73 QRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLK 132
Query: 770 NEKKRFINELQNDENVV---------------------AMVGDGINDAAALASSHIGVAM 808
+ M+GDG D A + +
Sbjct: 133 FYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGF 192
Query: 809 GGGVGAASEVASVVLMGNRLSQLL 832
GG V + +LL
Sbjct: 193 GGNVIRQQVKDNAKWYITDFVELL 216
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.9 bits (100), Expect = 6e-05
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 769 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 828
+ K++ + ++ V GD ND L+ +H G+ E +
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHT-Y 189
Query: 829 SQLLVAL-ELSRLTM 842
L + S ++
Sbjct: 190 EDLKREFLKASSRSL 204
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 12/68 (17%)
Query: 134 GMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLT 193
MTCGGCA +V R+L ++L + + +++ + L L
Sbjct: 8 DMTCGGCAEAVSRVLNKLG-GVKYDIDLPNKKVCI----ESEHSM-------DTLLATLK 55
Query: 194 SCGFKSSL 201
G S
Sbjct: 56 KTGKTVSY 63
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 41.7 bits (96), Expect = 1e-04
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 769 PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 828
++ + VGDG ND + + + +A E A + + L
Sbjct: 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDL 202
Query: 829 SQLLVALE 836
++L ++
Sbjct: 203 REILKYIK 210
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 831
K+ E A VGD +ND + L ++ GVAMG +A V + N +
Sbjct: 219 KRLAKQLNIPLEETAA-VGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGV 277
Query: 832 LVALE 836
++
Sbjct: 278 AHMMK 282
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836
+ +GD ND A + + +GVA+ + + EVA+ V N + A+E
Sbjct: 216 IMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 38.8 bits (89), Expect = 0.002
Identities = 35/264 (13%), Positives = 68/264 (25%), Gaps = 47/264 (17%)
Query: 573 VVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGK 632
+ D GT+T ++ + E ++ A + + G
Sbjct: 5 ISIDIDGTITYPNRMIHEKAL--------------------EAIRRAESLGIPIMLVTGN 44
Query: 633 AIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVE 692
+ A S ED + +D E
Sbjct: 45 TVQFAEAASILIGTSGPVVA-------------EDGGAISYKKKRIFLASMDEEWILWNE 91
Query: 693 MEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 752
+ + + + AGL+ + + I + + + + +++ D +
Sbjct: 92 IRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII----NELNLNLVAVDSGFAIHVK 147
Query: 753 ASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGV 812
+ K + ++ L VA VGDG ND A VA+
Sbjct: 148 KPWI----------NKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP 197
Query: 813 GAASEVASVVLMGNRLSQLLVALE 836
E A V A+
Sbjct: 198 KILKENADYVTKKEYGEGGAEAIY 221
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.4 bits (88), Expect = 0.003
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN 826
V +VGD ND A L++ A+ +A A VL +
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVS 266
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.7 bits (86), Expect = 0.003
Identities = 6/51 (11%), Positives = 14/51 (27%)
Query: 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836
+ ++GD ND V+ V + ++ +
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 932 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.87 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 99.5 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 99.49 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 99.49 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 99.47 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 99.47 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 99.47 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 99.46 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.46 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 99.44 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 99.44 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 99.35 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.34 | |
| d1sb6a_ | 64 | Copper chaperone {Synechocystis sp. pcc 6803, Scat | 99.28 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.25 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.24 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.23 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.22 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.21 | |
| d1qupa2 | 72 | Copper chaperone for superoxide dismutase, N-termi | 99.2 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.18 | |
| d1fe0a_ | 66 | ATX1 metallochaperone protein (ATOX1) {Human (Homo | 99.17 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 99.14 | |
| d1cc8a_ | 72 | ATX1 metallochaperone protein (ATOX1) {Baker's yea | 99.11 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.07 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.04 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.04 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.04 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.94 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.93 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.9 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.81 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.8 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.8 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.7 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.2 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.19 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.82 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.8 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.68 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.65 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.45 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.41 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 97.4 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.36 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.21 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.98 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.89 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.86 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.76 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.65 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.62 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.48 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.14 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.1 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.06 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.95 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.81 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.63 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.53 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.33 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.17 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.09 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.06 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.97 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.95 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.32 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.84 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 92.22 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 90.91 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 87.45 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=8.2e-28 Score=237.63 Aligned_cols=122 Identities=32% Similarity=0.532 Sum_probs=117.8
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------------------ceeccc
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-----------------------------KVLSGV 767 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------------------------~v~~~~ 767 (932)
-|++|++++++|+.||++||+++|+|||+..+|..+|+++||... .+|+|+
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 399999999999999999999999999999999999999999431 689999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 768 KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 768 ~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
+|++|..+++.||+.|+.|+|+|||.||++||++|||||+|+++++.++++||++++++++..|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=9.6e-28 Score=227.88 Aligned_cols=131 Identities=34% Similarity=0.493 Sum_probs=115.2
Q ss_pred EEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC
Q 002354 703 YVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND 782 (932)
Q Consensus 703 ~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~ 782 (932)
++..|.+..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||+ .+|++++|++|..+++.+|+.
T Consensus 5 ~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~~p~~k~~~v~~~q~~ 82 (135)
T d2b8ea1 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK 82 (135)
T ss_dssp EEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCHHHHHHHHHHHTTT
T ss_pred EEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--hhccccchhHHHHHHHHHHcC
Confidence 445566666689999999999999999999999999999999999999999999997 899999999999999999875
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+.|+|+|||.||+|||++|||||+|+++++.++++||++++++++..|+++|+
T Consensus 83 -~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 83 -EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 68999999999999999999999999999999999999999999999999874
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=1.3e-22 Score=185.80 Aligned_cols=99 Identities=25% Similarity=0.332 Sum_probs=87.5
Q ss_pred CeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeee---eEEeccccccCCCceeecCC----------
Q 002354 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR---STVDESSFTGEPLPVTKIPE---------- 429 (932)
Q Consensus 363 ~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~---~~VDES~LTGES~Pv~K~~g---------- 429 (932)
+.++|+|++. ...++|++++|+|||+|.|++||+|||||+|++++ +.||||+|||||.|+.|.++
T Consensus 1 e~~kV~R~g~--~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~ 78 (115)
T d1wpga1 1 EMGKVYRADR--KSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQ 78 (115)
T ss_dssp SEEEEEBSSC--SSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGG
T ss_pred CceEEEECCC--ceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeecccccccccccc
Confidence 3578998742 23578999999999999999999999999998654 68999999999999999753
Q ss_pred ---CccccceeeecCcEEEEEEecCCcchHHHHHHHH
Q 002354 430 ---SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLV 463 (932)
Q Consensus 430 ---~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v 463 (932)
+.+|+||.+.+|+++++|++||.+|.+|||.+++
T Consensus 79 ~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 79 DKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp GCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred cccceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 4599999999999999999999999999998764
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.7e-14 Score=120.72 Aligned_cols=69 Identities=25% Similarity=0.467 Sum_probs=64.6
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
++..|+|+||+|++|+++||++|+++|||.+++||+.++++.|.||+...++ ++|.++|+++||++.+.
T Consensus 3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~a~l~ 71 (72)
T d2aw0a_ 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP--------ETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTSEEEEC
T ss_pred EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhhCCCcEeC
Confidence 4688999999999999999999999999999999999999999999988876 89999999999998653
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=99.49 E-value=2.5e-14 Score=118.15 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=61.4
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+|+|+||+|++|+++||++|++++||.+++||+.+++++|.||+...++ ++|.++|+++||++.+
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~a~v 67 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA--------TEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHTTSSCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhhCCCcEE
Confidence 5899999999999999999999999999999999999999999988776 8999999999998764
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=99.49 E-value=2.8e-14 Score=119.21 Aligned_cols=69 Identities=29% Similarity=0.488 Sum_probs=64.9
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+++.|.|+||+|++|+++||+.|+++|||.+++||+.++++.|.||+...++ ++|.++|+++||++.+.
T Consensus 3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~a~v~ 71 (72)
T d1osda_ 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV--------QKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH--------HHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeEeC
Confidence 5789999999999999999999999999999999999999999999988776 89999999999998754
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.3e-14 Score=121.71 Aligned_cols=72 Identities=21% Similarity=0.397 Sum_probs=67.2
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
..++.|.|+||+|++|+++||++|+++|||.+++||+.+++++|.|++...++ +.|.++|+++||++.+..+
T Consensus 8 ~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~--------~~i~~~I~~~Gy~a~~~~~ 79 (84)
T d1q8la_ 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------EEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEECSCC
T ss_pred CEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCH--------HHHHHHHHHhCCccEEcCC
Confidence 46789999999999999999999999999999999999999999999988876 8999999999999887654
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=99.47 E-value=5.2e-14 Score=116.61 Aligned_cols=67 Identities=22% Similarity=0.340 Sum_probs=63.0
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
++.+|.|+||+|++|+++||++|+++|||.+++||+.++++.|.||+...+. ++|.+.|+++||++.
T Consensus 2 ~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV--------KDIADAIEDQGYDVA 68 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCEEC
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHHhCCccc
Confidence 5788999999999999999999999999999999999999999999988776 889999999999863
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.47 E-value=3.5e-14 Score=118.63 Aligned_cols=69 Identities=23% Similarity=0.482 Sum_probs=63.1
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
+++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|+++. ++ ++|.++|+++||++.+.+
T Consensus 2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~-~~--------~~i~~~i~~~Gy~a~~~~ 70 (72)
T d2ggpb1 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TA--------DSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSC-CH--------HHHHHHHHHTTCCCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCC-CH--------HHHHHHHHHhCCCeEEcc
Confidence 4689999999999999999999999999999999999999999999764 44 789999999999987654
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=6.6e-14 Score=119.17 Aligned_cols=73 Identities=19% Similarity=0.381 Sum_probs=67.6
Q ss_pred CccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 124 ~~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
..++++|.|+||+|++|+++||++|+++|||.+++||+.++++.|.|++...++ ++|.++|+++||++.+..
T Consensus 6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~--------~~i~~~i~~~GY~~~~~~ 77 (79)
T d1kvja_ 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEECS
T ss_pred CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHhcCCCcEeCC
Confidence 367899999999999999999999999999999999999999999999888776 899999999999987655
Q ss_pred C
Q 002354 204 M 204 (932)
Q Consensus 204 ~ 204 (932)
+
T Consensus 78 ~ 78 (79)
T d1kvja_ 78 P 78 (79)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.46 E-value=1.1e-14 Score=162.27 Aligned_cols=124 Identities=25% Similarity=0.280 Sum_probs=106.1
Q ss_pred EEEEEEeccccc--HHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----C----------------------
Q 002354 710 LAGLIYVEDRIR--DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----D---------------------- 761 (932)
Q Consensus 710 ~lG~i~l~D~lr--~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~---------------------- 761 (932)
..|++..+|+++ ++++++|+.|+++|++++|+|||+..+|+.+++++||.. .
T Consensus 204 ~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~ 283 (380)
T d1qyia_ 204 KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (380)
T ss_dssp CCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred hcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhcccccccc
Confidence 457888888854 599999999999999999999999999999999999842 0
Q ss_pred ----------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCC---eeEEec-CchHHHHh----hcCEEE
Q 002354 762 ----------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSH---IGVAMG-GGVGAASE----VASVVL 823 (932)
Q Consensus 762 ----------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~---vgIa~~-~~~~~a~~----~ad~vl 823 (932)
..+++.+|++|..+++.++..++.|+|||||.||++|++.|| |||+|| .+++..++ .||+++
T Consensus 284 KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii 363 (380)
T d1qyia_ 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363 (380)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE
Confidence 134567899999999999999999999999999999999999 999999 56655444 799999
Q ss_pred eCCChhHHHHHH
Q 002354 824 MGNRLSQLLVAL 835 (932)
Q Consensus 824 ~~~~~~~i~~~i 835 (932)
+++..+.+++
T Consensus 364 --~~~~el~~il 373 (380)
T d1qyia_ 364 --NHLGELRGVL 373 (380)
T ss_dssp --SSGGGHHHHH
T ss_pred --CCHHHHHHHH
Confidence 5677776654
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=8.5e-14 Score=116.35 Aligned_cols=67 Identities=33% Similarity=0.509 Sum_probs=63.2
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
.++++|.|+||+|++|+++||++|+++|||.+++||+.++++.|.||+...+. ++|.++|+++||++
T Consensus 5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~--------~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHV 71 (72)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH--------HHHHHHHHHHTCEE
T ss_pred ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHHhCCcc
Confidence 45789999999999999999999999999999999999999999999888776 89999999999975
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=8.9e-14 Score=118.38 Aligned_cols=71 Identities=28% Similarity=0.449 Sum_probs=66.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...+. ++|.++|+++||++.+..+
T Consensus 2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 72 (79)
T d1p6ta2 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKGE 72 (79)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCS
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCH--------HHHHHHHHHHCCceEECCc
Confidence 4689999999999999999999999999999999999999999999988776 8999999999999887654
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=9.1e-13 Score=110.21 Aligned_cols=68 Identities=21% Similarity=0.306 Sum_probs=61.3
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+.+|.|+||+|++|+++||++|++++||.+++||+.++++.|.+++.. . ++|.++|+++||++...+
T Consensus 3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~--~--------~~i~~~i~~~GY~v~~~~ 70 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI--R--------AQVESALQKAGYSLRDEQ 70 (73)
T ss_dssp CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC--H--------HHHHHHHHHHTCCCCBCC
T ss_pred CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCC--H--------HHHHHHHHHcCCcccCCC
Confidence 4688999999999999999999999999999999999999999998763 2 679999999999987543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.34 E-value=1.6e-12 Score=132.77 Aligned_cols=136 Identities=21% Similarity=0.172 Sum_probs=108.4
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..|++++- =...+.+.+.++|++|+++|++++++||++...+..+++.+++...
T Consensus 3 K~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~ 79 (230)
T d1wr8a_ 3 KAISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 79 (230)
T ss_dssp CEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred eEEEEecCCCCcC---CCCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccccc
Confidence 3567777887641 1336889999999999999999999999999999999999997421
Q ss_pred -------------------------------------------------------------ceeccc--ChhhHHHHHHH
Q 002354 762 -------------------------------------------------------------KVLSGV--KPNEKKRFINE 778 (932)
Q Consensus 762 -------------------------------------------------------------~v~~~~--~p~~K~~~v~~ 778 (932)
..+..+ ....|...++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~ 159 (230)
T d1wr8a_ 80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK 159 (230)
T ss_dssp CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcc
Confidence 000011 22345555555
Q ss_pred Hhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 779 LQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 779 l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
+.+ ..+.++++|||.||.+||+.|++||||+++.+.+++.||+|+.+++.+++.++++.-
T Consensus 160 l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 160 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 433 345799999999999999999999999999999999999999999999999987754
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Probab=99.28 E-value=1.6e-12 Score=105.68 Aligned_cols=63 Identities=22% Similarity=0.391 Sum_probs=57.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
+++|.|+||+|++|+++||++|+++|||.++++|+.++++.|+.+ .++ ++|.++|+++||++.
T Consensus 2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~---~~~--------~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGE--------EQLRTAIASAGHEVE 64 (64)
T ss_dssp EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESS---SCH--------HHHHHHHHHHCCCCC
T ss_pred eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccC---CCH--------HHHHHHHHHcCCCCC
Confidence 368999999999999999999999999999999999999999754 334 789999999999863
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.25 E-value=5.2e-11 Score=108.18 Aligned_cols=101 Identities=28% Similarity=0.298 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCch--
Q 002354 610 LSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST-- 687 (932)
Q Consensus 610 ~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~-- 687 (932)
.+++++|.+++++|..|+||+++||+++++..++... +.++++..+|+|+.+ +.+.+|+++|+.+.++...+
T Consensus 10 ~~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~~--~~~~~~~~~G~Gi~g----~~v~vG~~~~~~~~~~~~~~~~ 83 (113)
T d2b8ea2 10 GDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEV 83 (113)
T ss_dssp SCHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCCC--CCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHH
T ss_pred CCHHHHHHHHHHHHCcCCCchHHHHHHHHHHhcCCCC--ccccceeeccceEEe----EEEEECcHHHHHhcCCCCCHHH
Confidence 4789999999999999999999999999999887643 447899999999886 46899999999998887653
Q ss_pred hhhHHHHHhCCCeEEEEEECCEEEEEEEe
Q 002354 688 FQEVEMEDLMNQSLVYVGVDNMLAGLIYV 716 (932)
Q Consensus 688 ~~~~~~~~~~g~~~~~va~~~~~lG~i~l 716 (932)
.......+.+|++++|++.|++++|+|++
T Consensus 84 ~~~~~~~~~~G~T~v~va~d~~~~G~ial 112 (113)
T d2b8ea2 84 ELALEKLEREAKTAVIVARNGRVEGIIAV 112 (113)
T ss_dssp HHHHHHHHTTTCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEE
Confidence 22344466789999999999999999986
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.24 E-value=1.8e-11 Score=120.47 Aligned_cols=127 Identities=17% Similarity=0.092 Sum_probs=99.6
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHH--
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE-- 778 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~-- 778 (932)
.+++..+++.+-.+...|. .+|+.|++.|+.+.++||+....+...++++++. .++....+ |...++.
T Consensus 20 ~v~~~~dG~e~k~F~~~Dg------~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~~~~--K~~~l~~~~ 89 (177)
T d1k1ea_ 20 QLHYDANGEAIKSFHVRDG------LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKLE--KETACFDLM 89 (177)
T ss_dssp EEEEETTEEEEEEEEHHHH------HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCSC--HHHHHHHHH
T ss_pred eEEEeCCCCEEEEEECcch------HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc--cccccccc--HHHHHHHHH
Confidence 3556666665555554443 3799999999999999999999999999999997 56655544 4444443
Q ss_pred --HhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHHH
Q 002354 779 --LQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALEL 837 (932)
Q Consensus 779 --l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~~ 837 (932)
+.-....|+|+||+.||.+||+.|++++||+++.+.+++.||+|+..+.=.+ +.+++++
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~ 151 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDM 151 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHH
Confidence 3334578999999999999999999999999999999999999999776444 5555553
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.23 E-value=1.9e-11 Score=125.14 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=108.5
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
+.+++..|++++ -=+.++.+++.+++++|++.|++++++||++...+..+.+.+|+...
T Consensus 4 Kli~~D~DGTL~---~~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~ 80 (225)
T d1l6ra_ 4 RLAAIDVDGNLT---DRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 80 (225)
T ss_dssp CEEEEEHHHHSB---CTTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEecCCCCc---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEE
Confidence 345566666664 23456889999999999999999999999999999999999997431
Q ss_pred ------------------------------------------------------ce-----ecccCh--hhHHHHHHHHh
Q 002354 762 ------------------------------------------------------KV-----LSGVKP--NEKKRFINELQ 780 (932)
Q Consensus 762 ------------------------------------------------------~v-----~~~~~p--~~K~~~v~~l~ 780 (932)
.+ .....| .+|...++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~ 160 (225)
T d1l6ra_ 81 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 160 (225)
T ss_dssp SSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred ecChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHh
Confidence 00 111222 36777777665
Q ss_pred hC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 781 ND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 781 ~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
++ ...|+++|||.||.+|++.|++||||+|+.+.+++.||+|+..++..+|.++++.
T Consensus 161 ~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 161 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 43 3569999999999999999999999999999999999999999999999998873
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.22 E-value=9.4e-12 Score=131.87 Aligned_cols=133 Identities=20% Similarity=0.277 Sum_probs=108.1
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---------------c---
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------K--- 762 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~---------------~--- 762 (932)
.++...||+++. =...+.+.+.++|++|+++|++++++||++...+..+.++++++.. .
T Consensus 3 li~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~i~~ 79 (285)
T d1nrwa_ 3 LIAIDLDGTLLN---SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHH 79 (285)
T ss_dssp EEEEECCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEE
T ss_pred EEEEECCccccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCceeee
Confidence 567777888773 2346789999999999999999999999999999999999987420 0
Q ss_pred -----------------------------e--------------------------------------------------
Q 002354 763 -----------------------------V-------------------------------------------------- 763 (932)
Q Consensus 763 -----------------------------v-------------------------------------------------- 763 (932)
+
T Consensus 80 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (285)
T d1nrwa_ 80 ETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQE 159 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGG
T ss_pred ccCCHHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeechHHH
Confidence 0
Q ss_pred --------------------------------------------ecccChh--hHHHHHHHHhhC----CCEEEEEcCCc
Q 002354 764 --------------------------------------------LSGVKPN--EKKRFINELQND----ENVVAMVGDGI 793 (932)
Q Consensus 764 --------------------------------------------~~~~~p~--~K~~~v~~l~~~----g~~v~~vGDg~ 793 (932)
+..+.|. +|..-++.+.++ ...|+++|||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ 239 (285)
T d1nrwa_ 160 LFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSL 239 (285)
T ss_dssp GTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSG
T ss_pred HhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCH
Confidence 0001222 577777777553 24699999999
Q ss_pred ccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 794 NDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 794 ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||.+||+.|+.||||+|+++.+++.||+|+.+++-++|.++|+
T Consensus 240 ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 240 NDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp GGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 9999999999999999999999999999999999999998886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=1.2e-11 Score=130.02 Aligned_cols=134 Identities=18% Similarity=0.259 Sum_probs=109.0
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
.++++..|++++. =+.++.+.+.++|++|+++|++++++||++...+..+.+++++...
T Consensus 5 Kli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~ 81 (271)
T d1rkqa_ 5 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 81 (271)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCccccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCC
Confidence 4567777888753 2446889999999999999999999999999999999999987420
Q ss_pred --------------------------------------------------------------------------------
Q 002354 762 -------------------------------------------------------------------------------- 761 (932)
Q Consensus 762 -------------------------------------------------------------------------------- 761 (932)
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (271)
T d1rkqa_ 82 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 161 (271)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCH
Confidence
Q ss_pred ------------------------ceecccChh--hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 762 ------------------------KVLSGVKPN--EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 762 ------------------------~v~~~~~p~--~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
..+..+.|. +|...++.+.++ ...++++|||.||.+||+.|+.|+||+|+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na 241 (271)
T d1rkqa_ 162 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA 241 (271)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCC
Confidence 000112332 477777766553 34699999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+.+++.||+|+.+++-+++.++++
T Consensus 242 ~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 242 IPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CHHHHHhCCEEcCCCCcChHHHHHH
Confidence 9999999999999998899999876
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.20 E-value=1.7e-11 Score=101.76 Aligned_cols=66 Identities=18% Similarity=0.371 Sum_probs=58.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..+.+|.|+ |+|++|+++||++|++++||.+++||+.++++.|+++ .++ ++|.++|+++||++.++
T Consensus 5 ~~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~---~~~--------~~i~~~I~~~G~~A~l~ 70 (72)
T d1qupa2 5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIR 70 (72)
T ss_dssp CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHHTTCCCEEE
T ss_pred cEEEEEEEc-cCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEee---CCH--------HHHHHHHHHhCCCEEEe
Confidence 346789995 9999999999999999999999999999999999865 344 78999999999998764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=5.6e-12 Score=132.62 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=105.0
Q ss_pred EEEEEECCEEEEEEEeccc-ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 701 LVYVGVDNMLAGLIYVEDR-IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~-lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
++++..||+++. =... ..+.+.++|++|++.|++++++||++...+..+.+++++...
T Consensus 4 li~~DlDGTLl~---~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (269)
T d1rlma_ 4 VIVTDMDGTFLN---DAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFH 80 (269)
T ss_dssp EEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEE
T ss_pred EEEEeCCccCcC---CCCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEE
Confidence 456667887752 1112 357899999999999999999999999999999999886310
Q ss_pred --------------------------------------------------------------------------------
Q 002354 762 -------------------------------------------------------------------------------- 761 (932)
Q Consensus 762 -------------------------------------------------------------------------------- 761 (932)
T Consensus 81 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (269)
T d1rlma_ 81 GELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLV 160 (269)
T ss_dssp CCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHH
T ss_pred eccchHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHH
Confidence
Q ss_pred -------------c-----eecccCh--hhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHh
Q 002354 762 -------------K-----VLSGVKP--NEKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASE 817 (932)
Q Consensus 762 -------------~-----v~~~~~p--~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~ 817 (932)
. .+..+.| .+|...++.|.++ ...|+++|||.||.+||+.|+.|+||+|+.+.+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~ 240 (269)
T d1rlma_ 161 IDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQ 240 (269)
T ss_dssp HHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHH
T ss_pred HHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHH
Confidence 0 0011233 2477777766543 34699999999999999999999999999999999
Q ss_pred hcCEEEeCCChhHHHHHHH
Q 002354 818 VASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 818 ~ad~vl~~~~~~~i~~~i~ 836 (932)
.||+|+.+++-++|.+.|+
T Consensus 241 ~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 241 IARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp HCSEECCCGGGTHHHHHHH
T ss_pred hCCEEcCCCCccHHHHHHH
Confidence 9999999999999998886
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Probab=99.17 E-value=1.9e-11 Score=99.54 Aligned_cols=63 Identities=27% Similarity=0.425 Sum_probs=56.2
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+.+|+| +|+|++|+.+||++|++++|+ +++||+.+++++|+++. ++ +.|.++|+++||++.+.
T Consensus 2 k~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~---~~--------~~i~~~I~~~Gy~a~li 64 (66)
T d1fe0a_ 2 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH---SM--------DTLLATLKKTGKTVSYL 64 (66)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS---CH--------HHHHHHHHTTTSCEEEE
T ss_pred CEEEEE-ccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeC---CH--------HHHHHHHHHhCCeEEEe
Confidence 368999 599999999999999999998 69999999999999874 33 78999999999998753
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=2.8e-10 Score=107.11 Aligned_cols=122 Identities=17% Similarity=0.165 Sum_probs=90.7
Q ss_pred EEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCcccc-ccCCCeE---EecC-Cee
Q 002354 587 VVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVK-VADGTFI---EEPG-SGT 661 (932)
Q Consensus 587 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~-~~~~~~~---~~~g-~g~ 661 (932)
+|+++++. +++++++++.+|+++|..|+||+++||++++++.+..... ....... .... .+.
T Consensus 3 q~td~ip~-------------~G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (136)
T d2a29a1 3 QASEFIPA-------------QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMS 69 (136)
T ss_dssp EEEEEEEC-------------TTCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEE
T ss_pred CcceEEeC-------------CCCCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccccccccccccccccccceE
Confidence 47888887 7899999999999999999999999999999886543211 1112222 2233 344
Q ss_pred EEEEcCeEEEeecHHHHh----hcCCCCch--hhhHHHHHhCCCeEEEEEECCEEEEEEEeccccc
Q 002354 662 VAIIEDRKVSVGTIDWLR----SHGVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIR 721 (932)
Q Consensus 662 ~~~i~~~~~~~Gs~~~i~----~~~~~~~~--~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr 721 (932)
...+++..+.+|++.+++ +.+..... ....+..+.+|.++++++.|++++|+|.+.|++|
T Consensus 70 g~~~~g~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 70 GINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 135 (136)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEECCEEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECCEEEEEEEEEeecC
Confidence 557899999999986554 44443322 2334446678999999999999999999999986
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.11 E-value=9.1e-11 Score=97.22 Aligned_cols=64 Identities=22% Similarity=0.426 Sum_probs=57.6
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcC-CCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQ-PQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~-~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
.++.+|.|+ |+|++|+.+|+++|+++ |||.+++||+.+++++|..+ .++ ++|.++|+++||++.
T Consensus 3 ~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~---~~~--------~~i~~~i~~~G~~~~ 67 (72)
T d1cc8a_ 3 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPY--------DFILEKIKKTGKEVR 67 (72)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTSSCEE
T ss_pred cEEEEEEEC-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeec---CCH--------HHHHHHHHHHCCccC
Confidence 467889997 99999999999999998 59999999999999999876 334 789999999999875
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.07 E-value=8.4e-11 Score=123.59 Aligned_cols=133 Identities=21% Similarity=0.220 Sum_probs=102.6
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
+++++..|++++. =...+.+.+.+++++|++.| +++++||++...+..+.++++....
T Consensus 3 Kli~~DlDGTL~~---~~~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i 78 (267)
T d1nf2a_ 3 RVFVFDLDGTLLN---DNLEISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVI 78 (267)
T ss_dssp CEEEEECCCCCSC---TTSCCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEE
T ss_pred EEEEEeCCccccC---CcCccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccc
Confidence 4677888888863 34568899999999998755 7999999999999999988875320
Q ss_pred --------------------------------------------------------------------cee---------
Q 002354 762 --------------------------------------------------------------------KVL--------- 764 (932)
Q Consensus 762 --------------------------------------------------------------------~v~--------- 764 (932)
.++
T Consensus 79 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (267)
T d1nf2a_ 79 LNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLD 158 (267)
T ss_dssp EECCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHH
T ss_pred cccCCCHHHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHH
Confidence 000
Q ss_pred -----------------------cccChh--hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHH
Q 002354 765 -----------------------SGVKPN--EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAA 815 (932)
Q Consensus 765 -----------------------~~~~p~--~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a 815 (932)
..++|. +|...++.+.++ ...|++||||.||.+||+.|++||||+||.+.+
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~ 238 (267)
T d1nf2a_ 159 ELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKV 238 (267)
T ss_dssp HHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHH
T ss_pred HHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHH
Confidence 011221 344444444331 235899999999999999999999999999999
Q ss_pred HhhcCEEEeCCChhHHHHHHH
Q 002354 816 SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 816 ~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|+.||+|+.+++.+++.++++
T Consensus 239 k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 239 KEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp HHHCSEECCCTTTTHHHHHHT
T ss_pred HHhCCEEcCCCCccHHHHHHH
Confidence 999999999999999999876
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1.3e-10 Score=118.53 Aligned_cols=110 Identities=22% Similarity=0.363 Sum_probs=92.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------------------cChhhHHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------------VKPNEKKRFINEL 779 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------------------~~p~~K~~~v~~l 779 (932)
+++|++.+.|+.||++|++++++||.....+..+++.+|++...+++. ..+..|.++++.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHH
Confidence 468999999999999999999999999999999999999975444331 2356799999998
Q ss_pred hhC--CCEEEEEcCCcccHHHHHhCCeeEEecC--chHHHHhhcCEEEeCCChhH
Q 002354 780 QND--ENVVAMVGDGINDAAALASSHIGVAMGG--GVGAASEVASVVLMGNRLSQ 830 (932)
Q Consensus 780 ~~~--g~~v~~vGDg~ND~~al~~A~vgIa~~~--~~~~a~~~ad~vl~~~~~~~ 830 (932)
+++ ...++++|||.||++|++.||++||++. .....++.+|+++. ++..
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred HhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 753 3579999999999999999999999973 45677788999884 4543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.04 E-value=9.9e-11 Score=123.33 Aligned_cols=137 Identities=21% Similarity=0.225 Sum_probs=100.9
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-----------------
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----------------- 760 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----------------- 760 (932)
.-+++++..||+++- -=.-.+.+.+.++|++|+++|++++++||++...+..+.+++++..
T Consensus 9 ~ikli~~DlDGTLl~--~~~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~ 86 (283)
T d2b30a1 9 DIKLLLIDFDGTLFV--DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 86 (283)
T ss_dssp CCCEEEEETBTTTBC--CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred CccEEEEECCCCCcC--CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEE
Confidence 446788888998751 0023588999999999999999999999999999999888765210
Q ss_pred ----C------------------------------------------------------------------------cee
Q 002354 761 ----D------------------------------------------------------------------------KVL 764 (932)
Q Consensus 761 ----~------------------------------------------------------------------------~v~ 764 (932)
. .++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (283)
T d2b30a1 87 DQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLM 166 (283)
T ss_dssp CTTCCEEEECCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEE
T ss_pred cCCCcEeeecccCHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEEE
Confidence 0 000
Q ss_pred cccChh----------------------------------hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 765 SGVKPN----------------------------------EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 765 ~~~~p~----------------------------------~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
....++ .|...++.+.+ ....|+++|||.||.+||+.|++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~v 246 (283)
T d2b30a1 167 IVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF 246 (283)
T ss_dssp ECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE
T ss_pred EecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEE
Confidence 011112 34444444332 2357999999999999999999999
Q ss_pred EecCchHHHHhhcCEEEeCC-ChhHHHHHHH
Q 002354 807 AMGGGVGAASEVASVVLMGN-RLSQLLVALE 836 (932)
Q Consensus 807 a~~~~~~~a~~~ad~vl~~~-~~~~i~~~i~ 836 (932)
+|+||.+.+|+.||+|+..+ +-.++.++++
T Consensus 247 a~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 247 AVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp ECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred EeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 99999999999999999754 4455777665
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.04 E-value=9.6e-11 Score=122.61 Aligned_cols=67 Identities=27% Similarity=0.279 Sum_probs=59.2
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 771 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 771 ~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
.|...++.|.+ ....++++|||.||.+||+.|+.||||+||.+.+|+.||+|+.+++-++|.++|+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 57777777654 34579999999999999999999999999999999999999999999999999863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.94 E-value=6.6e-10 Score=113.19 Aligned_cols=124 Identities=18% Similarity=0.159 Sum_probs=101.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCcee-----------------------cccChhhHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL-----------------------SGVKPNEKKRF 775 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~-----------------------~~~~p~~K~~~ 775 (932)
+++|++.+.++.|++.|++++++|+.....+..+.+++|+.. .++ ....|+.|..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~-~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG-GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc-ceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence 478999999999999999999999999999999999999853 332 23467889999
Q ss_pred HHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 002354 776 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMK 843 (932)
Q Consensus 776 v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 843 (932)
++.++..++.|+||||+.||.+|++.||+++|++...+.+++..--...-++++.|...++.-.....
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHH
T ss_pred HHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987666666654334445688888777765444433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.93 E-value=4e-10 Score=112.55 Aligned_cols=115 Identities=18% Similarity=0.242 Sum_probs=93.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHH----H
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRF----I 776 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~----v 776 (932)
.++.+++.+.++.++..|..++++||.....+....++.++.. .+.. .....|... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh--hhhhhhccccccccccccccccccccccchhhhHH
Confidence 4677889999999999999999999999999999999999863 1111 112233333 3
Q ss_pred HHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 777 NELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 777 ~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
+.++-....++++|||.||++|++.||+|||| ++.+..++.||+|+.++|+++|.++|
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 33444466799999999999999999999999 89999999999999999999988765
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.90 E-value=1.3e-09 Score=111.85 Aligned_cols=55 Identities=18% Similarity=0.359 Sum_probs=48.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
..+++..||+++ .+...+.++++|++|+++|++++++||++...+..+.++++++
T Consensus 3 Kli~~DlDGTLl-----~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 3 RLIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp EEEEECCBTTTB-----SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred EEEEEeCCCCCC-----CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 356677788874 5666788999999999999999999999999999999999984
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.81 E-value=8.2e-09 Score=102.50 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=89.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------ceecccChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------KVLSGVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------~v~~~~~p~~K~~~v~~l~~~g~~ 785 (932)
+..+.....++.+ +.+.+.+++|+............+++... .......+..+...++.++...+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e 147 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence 3455666666665 46889999999999999999999998632 111234556677788888888999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|++||||.||++||+.||+||||+...+..++++|+++. ++.+.+.+.+..
T Consensus 148 viaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 148 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred eEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 999999999999999999999996555666677788776 567777765554
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.80 E-value=2.6e-09 Score=110.14 Aligned_cols=132 Identities=16% Similarity=0.116 Sum_probs=100.8
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
.+++...|++++ .+.-.++..+.+.++++.|+.++++||++...+..+.+++++...
T Consensus 4 ~li~~DlDGTL~-----~~~~~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~ 78 (244)
T d1s2oa1 4 LLLISDLDNTWV-----GDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLD 78 (244)
T ss_dssp EEEEECTBTTTB-----SCHHHHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEEC
T ss_pred eEEEEECcccCC-----CCCCCHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcc
Confidence 345556788764 333344556667778889999999999999999999999998421
Q ss_pred -------------------------------------------------------------------ce-----eccc--
Q 002354 762 -------------------------------------------------------------------KV-----LSGV-- 767 (932)
Q Consensus 762 -------------------------------------------------------------------~v-----~~~~-- 767 (932)
.. ...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 158 (244)
T d1s2oa1 79 QHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLP 158 (244)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEE
T ss_pred hHHHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEe
Confidence 00 0111
Q ss_pred ChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcC-------EEEeCCChhHHHHHHH
Q 002354 768 KPNEKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS-------VVLMGNRLSQLLVALE 836 (932)
Q Consensus 768 ~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~ 836 (932)
...+|...++.+.++ ...|+++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..+|.++++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 234588777777654 24599999999999999999999999999999999988 6777778889888876
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.80 E-value=3.8e-09 Score=120.19 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=69.3
Q ss_pred CcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCC--CCcccCceEEE
Q 002354 515 GPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKT--GTLTIGRPVVT 589 (932)
Q Consensus 515 ~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKT--GTLT~g~~~v~ 589 (932)
..+...+..++++++.++|++|+++++++++.+..+++|+|+++|+..++|++|+..+.|.||| +|||.|-+.+.
T Consensus 175 ~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 175 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHH
Confidence 4566788899999999999999999999999999999999999999999999999999999998 99998876553
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=2.2e-08 Score=101.32 Aligned_cols=56 Identities=20% Similarity=0.273 Sum_probs=47.7
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
+++...||+++. =...+.+.+++++++|+++|+.++++||++...+..+.+++++.
T Consensus 6 li~~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 6 LVFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp EEEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred EEEEECCCCccC---CcCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 455677888752 23457889999999999999999999999999999999999984
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.20 E-value=7.9e-07 Score=89.20 Aligned_cols=127 Identities=16% Similarity=0.284 Sum_probs=85.0
Q ss_pred EEEEEECCEEEEEEEe--cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------
Q 002354 701 LVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------- 761 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l--~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------- 761 (932)
++++..||+++..-.- ...+.+.+.++|++|++ ++.++++||++....... .+....
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-~~~v~i~TGR~~~~l~~~---~~~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-RFDTYIVTGRSPEEISRF---LPLDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-HSEEEEECSSCHHHHHHH---SCSSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh-CCCEEEEcCCCHHHhhhh---cCccccEEecCeEEEecCCceee
Confidence 5677788886532111 12488999999999987 567999999998876543 332100
Q ss_pred ----------------------------------------------------------------------ceecccCh--
Q 002354 762 ----------------------------------------------------------------------KVLSGVKP-- 769 (932)
Q Consensus 762 ----------------------------------------------------------------------~v~~~~~p-- 769 (932)
..+..+.|
T Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~idi~p~g 157 (229)
T d1u02a_ 78 NNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPG 157 (229)
T ss_dssp CTTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTT
T ss_pred ecchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHhhcCCeEEEeeceEEEEecCC
Confidence 01112233
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 770 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
-+|...++.|.++ ..++++||+.||.+||+.++.|++|++|.. +..|++++. +...+.++++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcC--CHHHHHHHHH
Confidence 3588888888776 468899999999999999977666653322 467899985 3444555444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=1.1e-07 Score=96.31 Aligned_cols=53 Identities=15% Similarity=0.331 Sum_probs=44.2
Q ss_pred hHHHHHHHHhh-CCCEEEEEcC----CcccHHHHHhCC-eeEEecCchHHHHhhcCEEE
Q 002354 771 EKKRFINELQN-DENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVASVVL 823 (932)
Q Consensus 771 ~K~~~v~~l~~-~g~~v~~vGD----g~ND~~al~~A~-vgIa~~~~~~~a~~~ad~vl 823 (932)
.|..-++.|.+ ....|+++|| |.||.+||+.|+ .|+||+|+.|.+|..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 46666777755 3568999999 569999999997 69999999999999998765
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.82 E-value=2.6e-05 Score=81.54 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceecc-----------------cChhhHHHHH---
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----------------VKPNEKKRFI--- 776 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~~-----------------~~p~~K~~~v--- 776 (932)
++|+++.+.++.|++.|+++.++||--......+++++|++.+ +++|+ .....|...+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~ 214 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN 214 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhh
Confidence 4899999999999999999999999999999999999999743 35553 1223343332
Q ss_pred -H--HHhhCCCEEEEEcCCcccHHHHHh---CCeeEEec--Cc-----hHHHHhhcCEEEeCCChhHHHH
Q 002354 777 -N--ELQNDENVVAMVGDGINDAAALAS---SHIGVAMG--GG-----VGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 777 -~--~l~~~g~~v~~vGDg~ND~~al~~---A~vgIa~~--~~-----~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
. ...+....|.++|||.||..|.+. ++..++.| +. -+.-.+.-|+|+.++.--.++.
T Consensus 215 ~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~ 284 (291)
T d2bdua1 215 TDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVN 284 (291)
T ss_dssp HHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHH
T ss_pred HHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHH
Confidence 2 222345689999999999999874 35555554 32 2344477899999765444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.80 E-value=1.8e-05 Score=79.43 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=81.4
Q ss_pred cccHHHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc---cChhhH----HHHHHHHhh---CCCE
Q 002354 719 RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG---VKPNEK----KRFINELQN---DENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~---~~p~~K----~~~v~~l~~---~g~~ 785 (932)
++-|++.++++.|++.| +++.++|+.....+..+.+.+|+.. +.+.+. ..+..+ ...++.+.. ..+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~ 170 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 170 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChhH
Confidence 34589999999999987 8999999999999999999999963 122222 111222 223333422 2467
Q ss_pred EEEEcCCcccHHHHHhCCee---EEecCch-H-HHHhhcCEEEeCCChhHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIG---VAMGGGV-G-AASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vg---Ia~~~~~-~-~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++||||+.+|+.|-+.|++. |+-|... + ..+..+|+++ +++..+.+++.
T Consensus 171 ~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 171 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred heeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 99999999999999999954 4445322 2 3444689998 47777777665
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.68 E-value=1.7e-05 Score=78.92 Aligned_cols=115 Identities=16% Similarity=0.204 Sum_probs=85.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cc------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++ +. -.|+--..+.+.++-....++||
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~i 174 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFV 174 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccchh
Confidence 457999999999999999999999999999999999999963 1222 11 12343445556666667889999
Q ss_pred cCCcccHHHHHhCCe-eEEecC----chHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHI-GVAMGG----GVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~v-gIa~~~----~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||..+|..+-+.|++ .|.+.. ..+.....+|+++. ++..+++++
T Consensus 175 gD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 175 GDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred cCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 999999999999997 455532 22334456898884 777776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.65 E-value=7.7e-05 Score=76.11 Aligned_cols=117 Identities=19% Similarity=0.165 Sum_probs=85.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-c------cChhhHHHHHHHHhhC-CCEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-G------VKPNEKKRFINELQND-ENVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~------~~p~~K~~~v~~l~~~-g~~v~ 787 (932)
++.|++.++++.|+++|+++.++|+.+......+.+.+|+.. +.+.+ . -.|+.=...++.+.-. .+.++
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v 178 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 178 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEE
Confidence 578999999999999999999999999999999999999852 22222 1 1233334555555543 46799
Q ss_pred EEcCCcccHHHHHhCCee-EEecCchH---------------------------HHHhhcCEEEeCCChhHHHHHHHH
Q 002354 788 MVGDGINDAAALASSHIG-VAMGGGVG---------------------------AASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg-Ia~~~~~~---------------------------~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||||..+|+.+-+.|++- |++..|.. ..+..||+|+ +++..++.+|+.
T Consensus 179 ~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~~ 254 (257)
T d1swva_ 179 KVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEH 254 (257)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHH
T ss_pred EEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEE--CCHHHHHHHHHH
Confidence 999999999999999974 45533310 1112389999 478888888763
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.0004 Score=67.14 Aligned_cols=116 Identities=20% Similarity=0.231 Sum_probs=80.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHcCCCCCc-eecc----------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKN---------------SAEYVASLVGIPKDK-VLSG---------------- 766 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~-v~~~---------------- 766 (932)
++-|++.++++.|+++|++++++|..+.. -........|+.... .+|.
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~ 106 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 106 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccc
Confidence 35589999999999999999999986532 122233344443222 2222
Q ss_pred --cChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee--EEec--Cc-hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 767 --VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAMG--GG-VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 767 --~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg--Ia~~--~~-~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
-.|+--..+++.+.-....++||||..+|..|-+.|+++ +.+. .+ .+.....||+|+ +++..++++|+
T Consensus 107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHHHHHhc
Confidence 223334566677766677899999999999999999985 4443 22 355566799998 57888888775
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=1.3e-05 Score=80.54 Aligned_cols=56 Identities=13% Similarity=0.148 Sum_probs=43.7
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 757 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g 757 (932)
|.+++.+..||+++- =...+.+.++++|++|++.|+ ++++||++...+.....+.+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~~ 57 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGNDV 57 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTTH
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhhc
Confidence 456777788998852 255889999999999999885 77999999887776655543
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.40 E-value=0.00027 Score=70.38 Aligned_cols=97 Identities=12% Similarity=0.026 Sum_probs=61.2
Q ss_pred CCcHHHHHHHHHHhcCCcccccc--CCCeEEec---CCeeEEEE---c---C--eEEEeecHHHHhhcCCCCch------
Q 002354 627 VHPIGKAIVEAAEFSNCQNVKVA--DGTFIEEP---GSGTVAII---E---D--RKVSVGTIDWLRSHGVDTST------ 687 (932)
Q Consensus 627 ~hPi~~Ai~~~a~~~~~~~~~~~--~~~~~~~~---g~g~~~~i---~---~--~~~~~Gs~~~i~~~~~~~~~------ 687 (932)
.+|.+.|++.++...+......+ ...+.+.| .+..+.++ + + ..|.||+++.+.++|.....
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 58999999999887655422211 11223333 22222222 1 1 24789999999999863210
Q ss_pred ---------hhhHHHHHhCCCeEEEEEE------------------------CCEEEEEEEecccccHH
Q 002354 688 ---------FQEVEMEDLMNQSLVYVGV------------------------DNMLAGLIYVEDRIRDD 723 (932)
Q Consensus 688 ---------~~~~~~~~~~g~~~~~va~------------------------~~~~lG~i~l~D~lr~~ 723 (932)
....+.++.+|.+++.+|+ |++|+|++++.||+|++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 1122336788999999986 46899999999999963
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00013 Score=72.22 Aligned_cols=111 Identities=18% Similarity=0.169 Sum_probs=81.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. +.+++. -.|+-=...++.+.-..+.++||
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i 167 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 167 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEE
Confidence 356999999999999999999999999999999999999962 223321 12233355666666667889999
Q ss_pred cCCcccHHHHHhCCeeE-EecC--c-hHHHHhhcCEEEeCCChhHH
Q 002354 790 GDGINDAAALASSHIGV-AMGG--G-VGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 790 GDg~ND~~al~~A~vgI-a~~~--~-~~~a~~~ad~vl~~~~~~~i 831 (932)
||..+|+.|-+.+++.. .+.. . .+.....||+++. ++..+
T Consensus 168 gD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~el 211 (218)
T d1te2a_ 168 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTEL 211 (218)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGC
T ss_pred eeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC--ChhhC
Confidence 99999999999999753 3322 2 2223356888764 55543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.21 E-value=0.00015 Score=71.30 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=80.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhHH----HHHHHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEKK----RFINELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K~----~~v~~l~~~g~~v~~vGD 791 (932)
++.+++.+.++.|+..+ ++.++|+.+...++.+.+.+|+.. +.++ +.-.+..|. .+++.++-....++||||
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD 162 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceeecC
Confidence 56789999999999775 889999999999999999999863 1222 222233333 334444444568999999
Q ss_pred CcccHHHHHhCCe-eEEe--c-CchH-HHHhhcCEEEeCCChhHHHHHH
Q 002354 792 GINDAAALASSHI-GVAM--G-GGVG-AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 792 g~ND~~al~~A~v-gIa~--~-~~~~-~a~~~ad~vl~~~~~~~i~~~i 835 (932)
+.||..|-+.|++ .|++ | ...+ .....+|+++. ++..+.+.+
T Consensus 163 s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~l 209 (210)
T d2ah5a1 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAYF 209 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHHT
T ss_pred CHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHHh
Confidence 9999999999998 4555 3 2223 33344899874 577666543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.98 E-value=0.00036 Score=68.19 Aligned_cols=110 Identities=14% Similarity=0.192 Sum_probs=77.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.++++.|++.|+++.++|+... .+..+.+++|+.. +.+++. -.|+--..+++.+.-....++||
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~V 160 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEE
Confidence 4579999999999999999999998665 5567889999974 223221 23333455566665566789999
Q ss_pred cCCcccHHHHHhCCee-EEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIG-VAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-Ia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.+|..+-+.+++. |.+..+.. .+|..+ +++..+.+++
T Consensus 161 gD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 161 GDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp ESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred eCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHHh
Confidence 9999999999999985 44554432 344444 3455555443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.89 E-value=0.002 Score=63.91 Aligned_cols=115 Identities=14% Similarity=0.211 Sum_probs=83.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cChhh--HHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNE--KKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~--K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|+ .|++++++|+........+.+.+|+.. +.+++. ..|+- =...++.+.-....++||
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v 178 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccccee
Confidence 46789999999996 579999999999999999999999862 233321 12321 234445554456789999
Q ss_pred cCC-cccHHHHHhCCeeEE-e--cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDG-INDAAALASSHIGVA-M--GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg-~ND~~al~~A~vgIa-~--~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||. .+|+.+-+.|++-.. + +.......+.+|+++. ++..+.++++
T Consensus 179 gD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 227 (230)
T d1x42a1 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (230)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHH
T ss_pred ecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHH
Confidence 997 699999999998633 2 2334445567899874 7888888776
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.86 E-value=0.00026 Score=69.47 Aligned_cols=112 Identities=11% Similarity=0.171 Sum_probs=80.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-c------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++ ++++.++|+.....+..+.+.+|+... .+++ . -.|+--..+++.++-....++||
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V 160 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 160 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEe
Confidence 456899999999975 799999999999999999999998631 2221 1 12333345555555455789999
Q ss_pred cCCcccHHHHHhCCeeEEe---cCchHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVAM---GGGVGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~---~~~~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||..+|+.+-+.|++.... |..+....+.+|.++ +++..|.+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 161 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGGG
T ss_pred cCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHHh
Confidence 9999999999999998654 333444456788887 35655543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0016 Score=64.77 Aligned_cols=107 Identities=14% Similarity=0.195 Sum_probs=78.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----cee---cccCh--hhHHHHHHHHhhCCCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-----KVL---SGVKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~v~---~~~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
-.+.|++.+.+++|+++|+++.++|+..........+.+|+..- ..+ ....| +-=....+.+.-....++
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~l 205 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 205 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcEE
Confidence 45689999999999999999999999999999999999997421 111 11233 223455566655678899
Q ss_pred EEcCCcccHHHHHhCCeeEEe----cCc-hHHHHhhcCEEEe
Q 002354 788 MVGDGINDAAALASSHIGVAM----GGG-VGAASEVASVVLM 824 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgIa~----~~~-~~~a~~~ad~vl~ 824 (932)
||||..+|+.+-++|++-... |+. .......++.++.
T Consensus 206 ~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 206 FLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred EEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 999999999999999996544 332 2334455676664
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0013 Score=62.13 Aligned_cols=91 Identities=12% Similarity=0.100 Sum_probs=67.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHcCCCCC--ceecccChhh--HHHHHHHHhhCCCEEEEEcCCc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK-NSAEYVASLVGIPKD--KVLSGVKPNE--KKRFINELQNDENVVAMVGDGI 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~-~~a~~ia~~~gi~~~--~v~~~~~p~~--K~~~v~~l~~~g~~v~~vGDg~ 793 (932)
++.|++.++++.|+++|+++.++|..+. ..+..+-+.+++... .+...-.|.. -..+.+.+.-..+.++||||..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~ 125 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN 125 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCH
Confidence 4679999999999999999999997554 567777888887521 2333334433 3445555555667899999999
Q ss_pred ccHHHHHhCCee-EEec
Q 002354 794 NDAAALASSHIG-VAMG 809 (932)
Q Consensus 794 ND~~al~~A~vg-Ia~~ 809 (932)
+|+.+-+.|++- |.+.
T Consensus 126 ~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 126 RNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp HHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHcCCEEEEEC
Confidence 999999999884 3443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.62 E-value=0.0027 Score=63.48 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=82.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.++++.|++ |++++++|+.+........+.+|+.. +.++ +...+..| ..+.+.+.-....++||
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 187 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhccee
Confidence 357999999999984 89999999999999999999999863 2233 22222223 34445554456679999
Q ss_pred cCCc-ccHHHHHhCCee-EEec--C--chHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIG-VAMG--G--GVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 790 GDg~-ND~~al~~A~vg-Ia~~--~--~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||.. +|+.+-+.|++. +..- . ........+|+++. ++..+.++++.
T Consensus 188 GD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred ccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 9995 899999999996 5431 1 12222334788884 78888888764
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.48 E-value=0.0013 Score=60.79 Aligned_cols=89 Identities=12% Similarity=0.123 Sum_probs=61.9
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHH-------HcCCCCCceecc------cChhhHHHHHHHH
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS----AEYVAS-------LVGIPKDKVLSG------VKPNEKKRFINEL 779 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~----a~~ia~-------~~gi~~~~v~~~------~~p~~K~~~v~~l 779 (932)
+|++.|++.+.++.|+++|++++++|+++... ...+.. ..+......+.+ -.+.-|..+.+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 56789999999999999999999999987432 222211 123332222221 1234577777777
Q ss_pred hhCCC-EEEEEcCCcccHHHHHhCCee
Q 002354 780 QNDEN-VVAMVGDGINDAAALASSHIG 805 (932)
Q Consensus 780 ~~~g~-~v~~vGDg~ND~~al~~A~vg 805 (932)
...++ .++|+||...|+.|.+.+++-
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 66555 467889999999999999885
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.14 E-value=0.0071 Score=57.81 Aligned_cols=100 Identities=13% Similarity=0.173 Sum_probs=69.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-c------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-V------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.|+++.++|+.+.... .+.+.+|+.. +.+++. . .|+--....+.+. ...++||
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~--~~~~l~v 155 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLVI 155 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTT--CSSEEEE
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcC--CCCeEEE
Confidence 4568999999999999999999998766554 5778899863 123321 1 1222233334333 3458999
Q ss_pred cCCcccHHHHHhCCeeEEecCchHHHHhhcCE
Q 002354 790 GDGINDAAALASSHIGVAMGGGVGAASEVASV 821 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~ 821 (932)
||..+|..+-+.|++-...=++....++.-|+
T Consensus 156 gDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 156 GDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp ESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred eCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 99999999999999885444566666666553
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.10 E-value=0.012 Score=59.32 Aligned_cols=57 Identities=9% Similarity=0.121 Sum_probs=41.2
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGI 758 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi 758 (932)
....+.+..||+++= .++.-+++.++++.|+++|++++++|. .+........+++|+
T Consensus 6 ~ik~vlFDlDGTL~~----~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~ 65 (261)
T d1vjra_ 6 KIELFILDMDGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGV 65 (261)
T ss_dssp GCCEEEECCBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred hCCEEEEeCCCeeEE----CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcc
Confidence 345677777887642 344448999999999999999999985 445555555566676
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.06 E-value=0.0047 Score=60.75 Aligned_cols=119 Identities=18% Similarity=0.105 Sum_probs=74.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC--------H-------HHHHHHHHHcCCCCCceeccc----------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK--------K-------NSAEYVASLVGIPKDKVLSGV---------------- 767 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~--------~-------~~a~~ia~~~gi~~~~v~~~~---------------- 767 (932)
++-|++.++|++|+++|++++++|-.+ . .......++.|+..+.++...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence 467899999999999999999999421 1 122334455565333333221
Q ss_pred ---ChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEe-CCChhHHHHHHHHHH
Q 002354 768 ---KPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLM-GNRLSQLLVALELSR 839 (932)
Q Consensus 768 ---~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~~gR 839 (932)
.|+--.+..+.+.-....+.||||..+|+.+-+.|++ +|.+..+... ...+.... -.++..+.++++...
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~--~~~~~~~~~~~~~~e~~dll~~v~ 202 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA--VQPGFAIRPLRDSSELGDLLAAIE 202 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE--EETTEEEEEESSHHHHHHHHHHHH
T ss_pred ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCc--ccCCccccCccchhHHHHHHHHHH
Confidence 2222345555665556789999999999999999998 5666433211 12333333 245666666665443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.95 E-value=0.0064 Score=59.48 Aligned_cols=116 Identities=22% Similarity=0.315 Sum_probs=85.3
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-ccC------h-----------------------
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-GVK------P----------------------- 769 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-~~~------p----------------------- 769 (932)
+-|++.++++.+++. ...+++|---.+-.+++|+.+|++.+ +++ +++ |
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-eecccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 568999999999977 77788887788889999999999743 222 111 0
Q ss_pred ------------------------hhHHHHHHHHhh-CC-CEEEEEcCCcccHHHHHhCCe--eEEec-CchHHHHhhcC
Q 002354 770 ------------------------NEKKRFINELQN-DE-NVVAMVGDGINDAAALASSHI--GVAMG-GGVGAASEVAS 820 (932)
Q Consensus 770 ------------------------~~K~~~v~~l~~-~g-~~v~~vGDg~ND~~al~~A~v--gIa~~-~~~~~a~~~ad 820 (932)
..|..+++..-. .+ ...++|||.+.|..||+.|.= |+|++ ||.+-+...||
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~ 239 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 239 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccc
Confidence 122222221111 01 235899999999999998843 77777 89999999999
Q ss_pred EEEeCCChhHHHHHHHH
Q 002354 821 VVLMGNRLSQLLVALEL 837 (932)
Q Consensus 821 ~vl~~~~~~~i~~~i~~ 837 (932)
+.+.+.+...+..++++
T Consensus 240 VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 240 VVIISPTAMSEAKVIEL 256 (308)
T ss_dssp EEEECSSTHHHHHHHHH
T ss_pred eEEeccchhHHHHHHHH
Confidence 99999999888888876
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.81 E-value=0.0025 Score=64.43 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=39.0
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 756 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~ 756 (932)
..+++..||++. -.+..-+++.++|++|++.|++++++|+....+...+++++
T Consensus 3 k~v~fDlDGTL~----~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 3 QGYLIDLDGTIY----LGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CEEEECCBTTTE----ETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CEEEEcCCCccE----eCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 345666677653 23444489999999999999999999987766666665543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.63 E-value=0.0093 Score=58.09 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cc------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|+++.++|...........+..++.. +.++ +. -.|+-=...++.+.-....++||
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~V 172 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV 172 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEEE
Confidence 456889999999999999999999999999999999888753 1222 21 12222344555555566789999
Q ss_pred cCCcccHHHHHhCCeeEE-ec---CchHHHHhhcCEEEeCCChhHHHHH
Q 002354 790 GDGINDAAALASSHIGVA-MG---GGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa-~~---~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
||..+|+.+-+.|++-.. +. ...+.....+|+++ +++..++++
T Consensus 173 gD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 173 ASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp ESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred ecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHhh
Confidence 999999999999998744 32 22233344589887 468777653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.53 E-value=0.0049 Score=60.07 Aligned_cols=85 Identities=21% Similarity=0.431 Sum_probs=63.0
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCC----ceecccCh--hhHHHHHHHHhhCCCEEEEE
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPKD----KVLSGVKP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~----~v~~~~~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
..|++.+.++.+++.|++++.+||+.. .|++.+.+.+|++.. .++.+-.+ ..|.+.|+. ...++++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~----y~I~l~~ 162 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQD----KNIRIFY 162 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHH----TTEEEEE
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHH----cCeEEEe
Confidence 468999999999999999999999853 467777788999532 23333222 335555543 3589999
Q ss_pred cCCcccHHHHHhCCe-eEEe
Q 002354 790 GDGINDAAALASSHI-GVAM 808 (932)
Q Consensus 790 GDg~ND~~al~~A~v-gIa~ 808 (932)
||..+|..+-..|++ +|-+
T Consensus 163 GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 163 GDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp ESSHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHhHHHHcCCCceEe
Confidence 999999999999885 4544
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.33 E-value=0.023 Score=57.02 Aligned_cols=51 Identities=10% Similarity=0.157 Sum_probs=36.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 754 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~ 754 (932)
..+.+..||++. -.+.+-|++.++++.|++.|++++++|.....+...+++
T Consensus 3 k~vlFDlDGTL~----~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 3 KGYLIDLDGTIY----KGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp CEEEEECBTTTE----ETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred CEEEEcCcCceE----ECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 456677777753 234445999999999999999999999754444334443
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.17 E-value=0.021 Score=55.53 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=72.0
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceecc-----cCh--hhHHHHHHHHhhCCCEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----VKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~~-----~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
..++-|++.+.++.|++.|+++.++|+... +....+..|+... .++.. -.| +-=....+.+.-..+.++
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence 456788999999999999999999998754 5678888998531 11111 122 222334444444567799
Q ss_pred EEcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEe
Q 002354 788 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~ 824 (932)
||||..+|+.+-+.|++ .|.++.+ .....++.++.
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIVP 202 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEES
T ss_pred EEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEcC
Confidence 99999999999999997 4566543 23345666654
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.09 E-value=0.028 Score=54.60 Aligned_cols=113 Identities=16% Similarity=0.241 Sum_probs=77.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---ceec-------ccChh--hHHHHHHHHhhCCCEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVLS-------GVKPN--EKKRFINELQNDENVV 786 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~---~v~~-------~~~p~--~K~~~v~~l~~~g~~v 786 (932)
.+.+++.+.+++|+. +..++|+.....+..+.+.+|+... .+++ ...|+ -=....+.+.-..+.+
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~ 161 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 161 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceE
Confidence 467888888877754 5578999999999999999999632 1221 12332 2244555555566789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCch-------HH-HHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGV-------GA-ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~-------~~-a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+||||..+|+.+-+.|++- |++..+. +. ...-+|+++. ++..+..++.
T Consensus 162 l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll~ 218 (222)
T d2fdra1 162 VVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 218 (222)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHHH
Confidence 9999999999999999974 5554332 11 2234999995 6777777664
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.06 E-value=0.017 Score=56.10 Aligned_cols=97 Identities=10% Similarity=0.173 Sum_probs=68.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCC--Cceec-------ccChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIPK--DKVLS-------GVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~--~~v~~-------~~~p~~K~~~v~~l~~~g~~ 785 (932)
.+.+++.+.++.|+++|+++.++|+. ............|+.+ +.+++ .-.|+--...++.++-....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~ 176 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE 176 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcce
Confidence 46799999999999999999999953 3334445555566542 22222 13455556667777767788
Q ss_pred EEEEcCCcccHHHHHhCCe-eEEecCchHHH
Q 002354 786 VAMVGDGINDAAALASSHI-GVAMGGGVGAA 815 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~v-gIa~~~~~~~a 815 (932)
++||||..+|+.+-+.|++ +|-+.++.+..
T Consensus 177 ~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 177 VVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp EEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred EEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 9999999999999999997 55555554433
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.97 E-value=0.0054 Score=57.68 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=58.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC--------HHH-------HHHHHHHcCCCCCcee-cc-----------cChhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNS-------AEYVASLVGIPKDKVL-SG-----------VKPNE 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~--------~~~-------a~~ia~~~gi~~~~v~-~~-----------~~p~~ 771 (932)
.+-|++.++++.|+++|++++++|..+ ... ....-...|+..+.++ +. -.|+-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~ 109 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 109 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGG
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccHH
Confidence 446899999999999999999999643 222 2344556666543333 21 12322
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIG 805 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg 805 (932)
=.++++.+.-..+.+.||||...|..|-+.|++-
T Consensus 110 ~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~ 143 (161)
T d2fpwa1 110 VERYLAEQAMDRANSYVIGDRATDIQLAENMGIN 143 (161)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred HHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCe
Confidence 2445555555567899999999999999999986
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.95 E-value=0.032 Score=55.85 Aligned_cols=56 Identities=14% Similarity=0.257 Sum_probs=39.4
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
..+.+..||++. -.+++=|++.++|+.|+++|++++++|+ .......+.-+++|++
T Consensus 4 k~VifDlDGTL~----~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 4 KNVICDIDGVLM----HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CEEEEECBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CEEEEECCCeeE----ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 356667777763 2444457899999999999999999984 4445554445567763
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.32 E-value=0.02 Score=55.28 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=61.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHHcCCC--CCceecc-----c--ChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA----EYVASLVGIP--KDKVLSG-----V--KPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a----~~ia~~~gi~--~~~v~~~-----~--~p~~K~~~v~~l~~~g~~ 785 (932)
.+.+++.+.++.|+++|++++++|....... ...-...++. .+.+++. - .|+-=..+++.+.-....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e 178 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccc
Confidence 3578999999999999999999996543322 2222223332 1233331 1 223324455555555578
Q ss_pred EEEEcCCcccHHHHHhCCe-eEEecCch
Q 002354 786 VAMVGDGINDAAALASSHI-GVAMGGGV 812 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~v-gIa~~~~~ 812 (932)
++||||...|+.+-+.+++ +|.+.++.
T Consensus 179 ~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 179 VVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred eeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 9999999999999999999 56665443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.84 E-value=0.18 Score=49.21 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=79.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc----Chh--hHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----KPN--EKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~----~p~--~K~~~v~~l~~~g~~v~~v 789 (932)
+.-+++.+++++|+ ++.+.++|..+...+..+-+..|+.. +.+++ .- .|+ -=...++.+.-+.+.++||
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~V 170 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEEE
Confidence 56688999999886 67889999999999999999999853 12332 21 232 2234555565566789999
Q ss_pred cCCcccHHHHHhCCee-EEec-CchH-HH------------------------HhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIG-VAMG-GGVG-AA------------------------SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-Ia~~-~~~~-~a------------------------~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||..+|+.+-+.|++- |.+. .+.+ .. ....|+++ +++..++.+++
T Consensus 171 gD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (245)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred eCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE--CCHHHHHHHHH
Confidence 9999999999999975 3332 1111 00 11378988 48999988876
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=92.22 E-value=0.76 Score=45.06 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=36.3
Q ss_pred CCcHHHHHHHHHHhcCCccccccC---------------------CCeEEecCCeeEEEE---cC--------eEEEeec
Q 002354 627 VHPIGKAIVEAAEFSNCQNVKVAD---------------------GTFIEEPGSGTVAII---ED--------RKVSVGT 674 (932)
Q Consensus 627 ~hPi~~Ai~~~a~~~~~~~~~~~~---------------------~~~~~~~g~g~~~~i---~~--------~~~~~Gs 674 (932)
..|.+.|++.++...++....... ..+.+...+..+.++ .+ ..|.||+
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCC
Confidence 579999999999887764322110 112333444444433 11 3699999
Q ss_pred HHHHhhcCC
Q 002354 675 IDWLRSHGV 683 (932)
Q Consensus 675 ~~~i~~~~~ 683 (932)
++.+.++|.
T Consensus 158 pe~iL~~C~ 166 (239)
T d1wpga3 158 PEGVIDRCN 166 (239)
T ss_dssp HHHHHHTEE
T ss_pred hHHHHHhcc
Confidence 999999985
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=90.91 E-value=0.045 Score=51.13 Aligned_cols=93 Identities=14% Similarity=0.231 Sum_probs=62.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCCC--Cceecc-----cChhhH--HHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV-GIPK--DKVLSG-----VKPNEK--KRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~-gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~~ 788 (932)
++.+++.+.++.+++.|+++.++|+-+...+...-.+. |+.. +.+++. -.|.-+ ..+.+.+.-..+.++|
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~ 163 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEE
Confidence 46889999999999999999999976655544333332 3321 233322 223222 3444555545678999
Q ss_pred EcCCcccHHHHHhCCe-eEEecCc
Q 002354 789 VGDGINDAAALASSHI-GVAMGGG 811 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~~ 811 (932)
|||..+|+.+-+.|++ +|.+.+.
T Consensus 164 vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 164 FDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp EESCHHHHHHHHTTTCEEEECCST
T ss_pred EeCCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999998 5666543
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=87.45 E-value=0.43 Score=52.12 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=65.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccccc
Q 002354 826 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSK 905 (932)
Q Consensus 826 ~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~ 905 (932)
.++..+.. +||.++.+++|.+.|.++.|+..+...+... ..+ .-.|+.+..+..++-+...+-|+.|.. .|+
T Consensus 219 r~L~avE~---~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~--~l~-~p~pl~~~qILwinli~d~lpaiaL~~--ep~ 290 (472)
T d1wpga4 219 RSLPSVET---LGRAIYNNMKQFIRYLISSNVGEVVCIFLTA--ALG-LPEALIPVQLLWVNLVTDGLPATALGF--NPP 290 (472)
T ss_dssp SCTTHHHH---HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSC-CCCSCCHHHHHHHHHTTTHHHHHHHTT--CCC
T ss_pred hhHHHHHH---HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHH--HcC-CCccccHHHHHHHHHHhHHHHHHHHhc--CCC
Confidence 36766665 5999999999999999999986554433221 122 123555556667766777777777654 456
Q ss_pred cccccCCCCCCCCCCcccccc
Q 002354 906 QKASFQAPSSRVNSNVDSHQL 926 (932)
Q Consensus 906 ~~~~~k~~~~~~~~~~~~~~~ 926 (932)
+.+++++||++.+.+..+..+
T Consensus 291 d~~iM~~~Pr~~~~~li~~~~ 311 (472)
T d1wpga4 291 DLDIMDRPPRSPKEPLISGWL 311 (472)
T ss_dssp CSGGGGSCCCCTTCCSSCTHH
T ss_pred chhhhcCCCCCCCccccCHHH
Confidence 667899999999888877655
|