Citrus Sinensis ID: 002366

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF
cHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccEEEEcccEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEEcccHHHHHHccccccEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEccccEEEEcccccEEEEEEEEEccccccccEEEEEEEccccccccccEEEEEEEEccccEEEEEEEEcccccccccccEEEEEcccccccEEEccccEEEEcccccccEEEEEEccccEEEEEEEEEEEEEEcccccccccEEEcccccccccccccccEEEEEccEEEEEEEEEccEEEEEEEEEcccccEEEEEEEccccccccccEEEEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccEEEEEEEccccEEEEEccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEEcEEEEEcccccccHHHHHccccccccccEEEcccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHccccccccccEEEEcccccccccccEEEcccccccHHHHHccccEEEEcccccccccccccccccccccEEEEcccEEEEEEEEc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccHHHHHHHHHcccccEEEEEEcHHHHHHHHHHcccEEEEEccccccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHccccccccccccccccccEEEEEEccccccccEEEEEEccccEEEEEcccccEEEEEEEEcccccccccccEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEccccccccccccccccccccccEEEEccEEEEEEccccccEEEEEEccccEEEEEEEEEEEEEcccccccccEEEEccccccccccccccEEEEEEccHHHHHHHHccHHHHHHEEEcccccEEEEEEEEcccccccccccEEEEEEEEEcccccEEEEccccHHHHHHHHcccccccccccccHHHHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEEEEEEEcccccccccccEccccEEcccccEEEEEcEEEEEEcccccHHHHHHHHHHHHcccccHccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHccccccccccEEEEHHHHcccccEEEEEEEEccccccHHHHcccEEEEcccccccccccccccccccccEEEEcccEEEEEEEEc
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIEnlcllkwhfsidgglgkvqkyknknggwcmhdeatthyvdmidqttlgHHYIKQhfnktpkagwqidpfghSAVQAYLLGVELGFDSVHFARIDYQDrakrkedksLEVIWRgsktfgsssqiftnafpvhysppsgfhfeltddfdpvqdnplldgynveQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGgrvnalystpslyteaknaangpwplktddyfpyadrrnaywtgfftsrpalkGYVRVLSGFYLASRQLEFlagkkspgpttsaLGDALGIaqhhdavtgtakqhtTNDYAKRLAIGASEAEVVVSSSLSclasrksghqctkpastfsqcpllnisycpptekgipegknLVVAAynplgwnrtdiiripvndanlivkdplgnainVQYVNLDNVTSNLRKFYTEAylgqsskrvprYWLLFQvtvpplgwntyFISRAAGKVKRRKgfflaadspqdktvevgpgnlkmsfSRTTGQLKRMynsrtgvdvpiqQSFLWYgsmvdtqssgayifrpngaqpnvvsrsvpikiirgpmvdEVHQQFNSWIYQVTRLYidkehaeveytigpiptedsvgKEVISRMTANMVTEKVfytdsngrDFLKRVRDYRAdwslqvnepvagnyyplnlgifitdkkseFSVLVdratggasikdGQVEIMLHRRMladdgrgvgealdesvcvrdncegltvrgNYYLSVNQlgagarwrrttgqevysPLLLAFTQEKLETWTEshltkstamesdyslplNVALITLEELDDGSVLLRLAHLYeegedaeySTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKvegesgkthspvrggpldastLVVELGPMEIRTFLLKF
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYqdrakrkedkslevIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEaknaangpwplkTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASrksghqctkpastfsqcpllNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLgqsskrvprYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFflaadspqdktvevgpgnlkmsfSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYifrpngaqpnvvSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVeytigpiptedsvgKEVISRMTAnmvtekvfytdsngrdfLKRVRDYRADwslqvnepvagnyYPLNLGIFITDKKSEFSVLVDRatggasikdgqvEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYeegedaeystLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGEsgkthspvrggpldASTLVVELGPMEIRTFLLKF
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGaseaevvvssslsclasRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF
***QIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRA******SLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLA*************DALGIAQHHDAVTGTA**HTTNDYAKRLAIGASEAEVVVSSSLSCLA***********ASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAA*************************LKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELK***************************************************TLVVELGPMEIRTFL***
**DQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYC**********KNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKG******SPQ*KTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNY********************VYSPLL********************AMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMT************************VVELGPMEIRTFLLKF
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLS**************ASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKV***********RGGPLDASTLVVELGPMEIRTFLLKF
MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAG****************DKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKL****ESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGE***************STLVVELGPMEIRTFLLKF
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MLDQIIAFRVLVWRMCWTQLWKLCVGIQIENLCLLKWHFSIDGGLGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query930 2.2.26 [Sep-21-2011]
O464321007 Lysosomal alpha-mannosida N/A no 0.883 0.816 0.385 1e-167
Q8VHC81007 Lysosomal alpha-mannosida yes no 0.890 0.822 0.384 1e-166
O091591013 Lysosomal alpha-mannosida yes no 0.892 0.819 0.389 1e-166
O007541011 Lysosomal alpha-mannosida yes no 0.884 0.814 0.383 1e-164
Q60HE91012 Lysosomal alpha-mannosida N/A no 0.884 0.813 0.382 1e-163
Q29451999 Lysosomal alpha-mannosida yes no 0.878 0.817 0.379 1e-162
P340981010 Lysosomal alpha-mannosida yes no 0.907 0.835 0.352 1e-155
Q167061144 Alpha-mannosidase 2 OS=Ho no no 0.882 0.717 0.252 7e-65
P270461150 Alpha-mannosidase 2 OS=Mu no no 0.864 0.699 0.258 9e-65
Q244511108 Alpha-mannosidase 2 OS=Dr no no 0.715 0.600 0.277 3e-62
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function desciption
 Score =  590 bits (1520), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 346/897 (38%), Positives = 496/897 (55%), Gaps = 75/897 (8%)

Query: 55  NGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNK--TPKAGWQIDPFGHSAVQAYLLGVE 112
           NGGW M+DEA THY  +IDQ TLG  +++  F K   P+  W IDPFGHS  QA L   +
Sbjct: 153 NGGWVMNDEAATHYGAIIDQMTLGLRFLEDTFGKDGRPRVAWHIDPFGHSREQASLFA-Q 211

Query: 113 LGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGS-SSQIFTNAFPVHYSPPSGFHFE 171
           +GFD + F R+DYQD+  R+E+  LE +WR S +    ++ +FT+  P  Y+PP    ++
Sbjct: 212 MGFDGLFFGRLDYQDKRVREENLGLEQVWRASASLKPPAADLFTSVLPNIYNPPEKLCWD 271

Query: 172 LTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFK 231
                 P  ++     YN E+ VN F+  A  Q    R NH + TMG DFQY+ A  WF+
Sbjct: 272 TLCADKPFVEDRRSPEYNAEELVNYFLQLATAQGQHFRTNHTIMTMGSDFQYENANMWFR 331

Query: 232 QMDKLIHYVN-----KGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWT 286
            +D+LI  VN      G RVN LYSTP+ Y    N AN  W +K DD+FPYAD  + +W+
Sbjct: 332 NLDRLIQLVNAQQQANGSRVNVLYSTPACYLWELNKANLTWSVKQDDFFPYADGPHQFWS 391

Query: 287 GFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSP-GP----TTSALGDALGIAQHHDAV 341
           G+F+SRPALK Y R+   F     QLE LAG  +  GP     ++ L  A+ + QHHDAV
Sbjct: 392 GYFSSRPALKRYERLSYNFLQVCNQLEALAGPAANVGPYGSGDSAPLNQAMAVLQHHDAV 451

Query: 342 TGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISY 401
           +GT+KQH  +DYA++LA G    EV++S++L+ L+  K           F+ C  LN+S 
Sbjct: 452 SGTSKQHVADDYARQLAAGWDPCEVLLSNALARLSGSKE---------DFTYCRNLNVSV 502

Query: 402 CPPTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVT 461
           CP ++      KN  V  YNPLG     ++R+PV+    +V+DP G  +    V L +  
Sbjct: 503 CPLSQTA----KNFQVTIYNPLGRKIDWMVRLPVSKHGFVVRDPNGTVVPSDVVILPSSD 558

Query: 462 SNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSP 521
                       GQ         LLF  +VP LG++ Y +S+  G+          +  P
Sbjct: 559 ------------GQE--------LLFPASVPALGFSIYSVSQVPGQRPHAHKPQPRSQRP 598

Query: 522 QDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWY----GSMVDTQSSGAY 577
             + + +   +++  F   TG L  M N    + +P++Q+F WY    G+ + TQ SGAY
Sbjct: 599 WSRVLAIQNEHIRARFDPDTGLLVEMENLDQNLLLPVRQAFYWYNASVGNNLSTQVSGAY 658

Query: 578 IFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIP 637
           IFRPN  +P +VS     ++++ P+V EVHQ F++W  QV RLY  + H E+E+T+GPIP
Sbjct: 659 IFRPNQEKPLMVSHWAQTRLVKTPLVQEVHQNFSAWCSQVVRLYRGQRHLELEWTVGPIP 718

Query: 638 TEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNL 697
             D  GKE+ISR    + T+ +FYTDSNGR+ L+R RDYR  W L   E VAGNYYP+N 
Sbjct: 719 VGDGWGKEIISRFDTVLETKGLFYTDSNGREILERRRDYRPTWKLNQTETVAGNYYPVNS 778

Query: 698 GIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCE 757
            I+I D   + +VL DR+ GG+S++DG +E+M+HRR+L DDGRGVGEAL E      +  
Sbjct: 779 RIYIRDGNMQLTVLTDRSQGGSSLRDGSMELMVHRRLLKDDGRGVGEALLE------DGL 832

Query: 758 GLTVRGNYYLSVNQLGAGARWRRTTGQ-EVYSPLLLAFTQEKLETWTESHLTKSTAMESD 816
           G  VRG + + ++++   A   R   + EV +P      Q  L     +      A    
Sbjct: 833 GRWVRGRHLVLLDKVRTAATGHRLQAEKEVLTP------QVVLAPGGGAPYHLKVAPRKQ 886

Query: 817 YS-----LPLNVALITLEELDDGSVLLRLAHLYEEGEDA-EYSTLAKVELKKMFKGKSIK 870
           +S     LP +V L+TL   D  ++LLRL H +  GED+   S+   ++L  +F   +I 
Sbjct: 887 FSGLRRELPPSVHLLTLARWDQKTLLLRLEHQFAVGEDSGNLSSPVTLDLTDLFSAFTIT 946

Query: 871 QLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 927
            L+E +L ANQ +    ++ W          SP R   LD +T+ ++  PMEIRTFL
Sbjct: 947 YLQETTLVANQLRASASRLKWTPNTGPTPLPSPSR---LDPATITLQ--PMEIRTFL 998
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.
Felis catus (taxid: 9685)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function description
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 Back     alignment and function description
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 Back     alignment and function description
>sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query930
2240713251011 predicted protein [Populus trichocarpa] 0.939 0.864 0.794 0.0
2254310961006 PREDICTED: lysosomal alpha-mannosidase [ 0.950 0.878 0.764 0.0
3565611361012 PREDICTED: lysosomal alpha-mannosidase-l 0.940 0.864 0.753 0.0
3575179831018 Lysosomal alpha-mannosidase [Medicago tr 0.941 0.860 0.753 0.0
3565027761012 PREDICTED: lysosomal alpha-mannosidase-l 0.940 0.864 0.754 0.0
3564953561004 PREDICTED: lysosomal alpha-mannosidase-l 0.940 0.871 0.752 0.0
3565027781028 PREDICTED: lysosomal alpha-mannosidase-l 0.940 0.851 0.741 0.0
4494344761007 PREDICTED: lysosomal alpha-mannosidase-l 0.937 0.865 0.728 0.0
4494914561007 PREDICTED: lysosomal alpha-mannosidase-l 0.937 0.865 0.725 0.0
326496396998 predicted protein [Hordeum vulgare subsp 0.935 0.871 0.675 0.0
>gi|224071325|ref|XP_002303405.1| predicted protein [Populus trichocarpa] gi|222840837|gb|EEE78384.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1463 bits (3787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/877 (79%), Positives = 763/877 (87%), Gaps = 3/877 (0%)

Query: 55   NGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 114
            NGGWCMHDEAT HY+DMIDQTTLGH  IK+ FNKTP+AGWQIDPFGHSAVQAYLLG ELG
Sbjct: 137  NGGWCMHDEATCHYIDMIDQTTLGHRAIKEQFNKTPRAGWQIDPFGHSAVQAYLLGTELG 196

Query: 115  FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTD 174
            FDSVHFARIDYQDRAKRK+DK+LEVIWRGSKTFGSSSQIF NAFPVHYSPP+GFHFE+ D
Sbjct: 197  FDSVHFARIDYQDRAKRKDDKALEVIWRGSKTFGSSSQIFANAFPVHYSPPNGFHFEVFD 256

Query: 175  DFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMD 234
            DF PVQDNPLLD YNVEQ VNDFI+AA+TQANVTR NHIMWTMGDDFQYQYAESWFKQMD
Sbjct: 257  DFVPVQDNPLLDDYNVEQRVNDFINAAMTQANVTRTNHIMWTMGDDFQYQYAESWFKQMD 316

Query: 235  KLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPA 294
            KLIHYVNK GRVNALYSTPS+YT+ KNAAN  WPLKTDDYFPYAD  NAYWTGFFTSRPA
Sbjct: 317  KLIHYVNKDGRVNALYSTPSIYTDVKNAANESWPLKTDDYFPYADTENAYWTGFFTSRPA 376

Query: 295  LKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYA 354
            LK YVR LSG+YLA+RQLEFL GKKS GP T  LGDALGIAQHHD VTGTAKQHTTNDY 
Sbjct: 377  LKRYVRQLSGYYLAARQLEFLVGKKSTGPNTYRLGDALGIAQHHDGVTGTAKQHTTNDYE 436

Query: 355  KRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKN 414
            KRLAIGA EAE  VSS+LSCL S KS  QC KPA  FSQC LLNISYCPPTE+ I  GK 
Sbjct: 437  KRLAIGALEAEATVSSALSCLVSNKSRDQCAKPALNFSQCQLLNISYCPPTEEAIANGKR 496

Query: 415  LVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLG 474
            LV+  YN LGWNRTD+IRIPVND NL+V D  G  I  QYV +DN TSNLR FY +AY G
Sbjct: 497  LVMVLYNALGWNRTDVIRIPVNDPNLVVADSYGKHIETQYVTMDNTTSNLRNFYLKAY-G 555

Query: 475  QSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLK 534
              S +VPRYWL FQV+VPPLGW+TYFI+RA G  KRR G  +  DSPQ+ T+E+G GNLK
Sbjct: 556  FPSIQVPRYWLHFQVSVPPLGWSTYFIARATGIGKRRNGLSV-MDSPQNDTIEIGSGNLK 614

Query: 535  MSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVD-TQSSGAYIFRPNGAQPNVVSRSV 593
            MSFS  TGQLKRMYNS+TGVDVPIQQS+ WYGS  +  QSSGAYI RP+G+ P+VV+RSV
Sbjct: 615  MSFSSMTGQLKRMYNSKTGVDVPIQQSYFWYGSSSELMQSSGAYILRPDGSPPHVVARSV 674

Query: 594  PIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTAN 653
            P+++ RGP+ DEV QQFNSWIYQVTR+Y D+EHAE+EYTIGPIP EDSVGKEVI+RMTAN
Sbjct: 675  PLQVHRGPLFDEVRQQFNSWIYQVTRVYKDQEHAELEYTIGPIPLEDSVGKEVITRMTAN 734

Query: 654  MVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVD 713
            M TEKVFYTDSNGRDFLKR+RDYRADWSL VNEPVAGNYYPLNLGIF  DK+SE SVLVD
Sbjct: 735  MATEKVFYTDSNGRDFLKRIRDYRADWSLSVNEPVAGNYYPLNLGIFTMDKRSELSVLVD 794

Query: 714  RATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLG 773
            RATGGASI+DGQ+E+MLHRR L DD RGV EALDESVC+ D CEGLT+RGNYYLS+NQ+G
Sbjct: 795  RATGGASIEDGQLELMLHRRTLHDDSRGVNEALDESVCIGDECEGLTIRGNYYLSINQVG 854

Query: 774  AGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDD 833
            AGA WRRTTGQE+Y+PLL AFTQEK ET   SH+   TAM+  YSLPLNVALITL+ELDD
Sbjct: 855  AGAVWRRTTGQEIYTPLLAAFTQEKEETSKASHVATGTAMDPGYSLPLNVALITLQELDD 914

Query: 834  GSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKV 893
            GSVLLRLAHLYE GEDA YSTLA VELKKMF GK+IK+LKEMSLS+NQEK EMKKMTWKV
Sbjct: 915  GSVLLRLAHLYEAGEDAAYSTLATVELKKMFSGKAIKELKEMSLSSNQEKSEMKKMTWKV 974

Query: 894  EGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930
            EG++G+  SPVRGGP+D+STLVVELGPMEIRTFLL+F
Sbjct: 975  EGDNGEQPSPVRGGPVDSSTLVVELGPMEIRTFLLQF 1011

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225431096|ref|XP_002265360.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734991|emb|CBI17353.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356561136|ref|XP_003548841.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357517983|ref|XP_003629280.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355523302|gb|AET03756.1| Lysosomal alpha-mannosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356502776|ref|XP_003520192.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356495356|ref|XP_003516544.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356502778|ref|XP_003520193.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|449434476|ref|XP_004135022.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449491456|ref|XP_004158902.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|326496396|dbj|BAJ94660.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query930
TAIR|locus:21568571047 AT5G66150 [Arabidopsis thalian 0.578 0.513 0.662 0.0
TAIR|locus:20908171019 AT3G26720 [Arabidopsis thalian 0.936 0.854 0.574 1e-283
TAIR|locus:21591431024 AT5G13980 [Arabidopsis thalian 0.933 0.847 0.574 1.1e-275
MGI|MGI:1072861013 Man2b1 "mannosidase 2, alpha B 0.541 0.497 0.369 1.6e-158
RGD|30391009 Man2b1 "mannosidase, alpha, cl 0.540 0.498 0.344 1.9e-155
UNIPROTKB|G5E9281010 MAN2B1 "Mannosidase, alpha, cl 0.540 0.498 0.369 2.4e-155
UNIPROTKB|F1PKB21007 MAN2B1 "Uncharacterized protei 0.409 0.378 0.413 2.4e-155
UNIPROTKB|O007541011 MAN2B1 "Lysosomal alpha-mannos 0.540 0.497 0.369 3.9e-155
UNIPROTKB|F1SEY11008 MAN2B1 "Uncharacterized protei 0.511 0.472 0.364 1.7e-154
UNIPROTKB|F1MMX7999 MAN2B1 "Lysosomal alpha-mannos 0.422 0.393 0.400 6.6e-149
TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1960 (695.0 bits), Expect = 0., Sum P(2) = 0.
 Identities = 360/543 (66%), Positives = 422/543 (77%)

Query:    55 NGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 114
             NGGW M+DEAT HY+DMIDQTT GH +IKQ FN TP+A WQIDPFGHS+VQAYLLG ELG
Sbjct:   136 NGGWAMNDEATCHYIDMIDQTTKGHRFIKQQFNTTPRAAWQIDPFGHSSVQAYLLGAELG 195

Query:   115 FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTD 174
              DSVHFARIDYQDR KRK +KSLEVIWRGSKT  SSSQIFTN F VHY PP+GFH+E+TD
Sbjct:   196 LDSVHFARIDYQDREKRKAEKSLEVIWRGSKTLDSSSQIFTNIFFVHYGPPTGFHYEVTD 255

Query:   175 DFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMD 234
             D+ P+QDNP  DGYN+++ VNDF++A+L  ANV+R NH+MWTMGDDFQYQ+AESWF+QMD
Sbjct:   256 DYVPLQDNPRFDGYNIKEAVNDFVNASLVYANVSRGNHVMWTMGDDFQYQFAESWFRQMD 315

Query:   235 KLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPA 294
             +LIHYVNK GRVNALYSTPSLY +AKN AN  WPLKT D+FPYADR  AYWTG+FTSRPA
Sbjct:   316 RLIHYVNKDGRVNALYSTPSLYVDAKNVANVTWPLKTHDFFPYADRAYAYWTGYFTSRPA 375

Query:   295 LKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYA 354
             LK YVR LSG+Y+A+RQLEFL GK S GP T +LGDALGIAQHHDAVTGTAKQH TNDY 
Sbjct:   376 LKRYVRALSGYYMAARQLEFLVGKNSGGPNTYSLGDALGIAQHHDAVTGTAKQHVTNDYM 435

Query:   355 KRLAIGXXXXXXXXXXXXXXXXXRKSGHQCTKPASTFSQ-CPLLNISYCPPTEKGIPEGK 413
             KRLA+G                 +     CTKPA  FSQ C L+NISYCP TE+ +P  K
Sbjct:   436 KRLALGASEAEAVVNSALACLMNKAPKGGCTKPAIAFSQQCSLMNISYCPSTEETLPGQK 495

Query:   414 NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYL 473
             +L++ AYN LGWNRT+IIRIPVNDA L V+D  GN ++ QY+ +DNVTSNLR FYT+AYL
Sbjct:   496 SLILVAYNSLGWNRTEIIRIPVNDAGLSVEDSSGNTLDAQYIPMDNVTSNLRSFYTKAYL 555

Query:   474 GQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNL 533
             G SS + P+YWL+F+  VPPLGWNT+FIS+A+ +            SP + T E+GPGNL
Sbjct:   556 GISSLQRPKYWLVFKAKVPPLGWNTFFISKASAQGSNNHKHSSVMLSPMNNTTEIGPGNL 615

Query:   534 KMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV----DTQSSGAYIFRPNGAQPNVV 589
             KM FS  +G+L+RMYNSRTG D+ + Q++ WY S V    D Q SGAYIFRPNG+    V
Sbjct:   616 KMVFSSDSGRLERMYNSRTGADIKVDQNYFWYASNVGDAKDPQVSGAYIFRPNGSLAYPV 675

Query:   590 SRS 592
             S S
Sbjct:   676 SSS 678
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0015923 "mannosidase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O00754MA2B1_HUMAN3, ., 2, ., 1, ., 2, 40.38330.88490.8140yesno
Q8VHC8MA2B1_CAVPO3, ., 2, ., 1, ., 2, 40.38470.89030.8222yesno
P34098MANA_DICDI3, ., 2, ., 1, ., 2, 40.35210.90750.8356yesno
Q29451MA2B1_BOVIN3, ., 2, ., 1, ., 2, 40.37910.87840.8178yesno
O09159MA2B1_MOUSE3, ., 2, ., 1, ., 2, 40.38920.89240.8193yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_III000676
hypothetical protein (1011 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query930
cd10810278 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic 1e-109
PLN027011050 PLN02701, PLN02701, alpha-mannosidase 4e-86
cd00451258 cd00451, GH38N_AMII_euk, N-terminal catalytic doma 2e-63
pfam01074269 pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam 2e-58
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 2e-49
cd10809340 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal 1e-41
cd11666344 cd11666, GH38N_Man2A1, N-terminal catalytic domain 2e-32
cd10811326 cd10811, GH38N_AMII_Epman_like, N-terminal catalyt 3e-30
cd11667344 cd11667, GH38N_Man2A2, N-terminal catalytic domain 2e-29
cd10786251 cd10786, GH38N_AMII_like, N-terminal catalytic dom 2e-25
smart0087279 smart00872, Alpha-mann_mid, Alpha mannosidase, mid 3e-22
pfam0926182 pfam09261, Alpha-mann_mid, Alpha mannosidase, midd 3e-20
>gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information 
 Score =  337 bits (866), Expect = e-109
 Identities = 108/190 (56%), Positives = 134/190 (70%), Gaps = 3/190 (1%)

Query: 55  NGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNK--TPKAGWQIDPFGHSAVQAYLLGVE 112
           NGGWCM+DEATTHY D+IDQ TLGH ++K  F +   P+ GWQIDPFGHS  QA L   +
Sbjct: 90  NGGWCMNDEATTHYEDIIDQMTLGHQFLKDTFGECARPRVGWQIDPFGHSRTQASLFA-Q 148

Query: 113 LGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFEL 172
           +GFD + F RIDYQD+A+R ++K +E IWRGS + G  + IFT     HY PP GF F++
Sbjct: 149 MGFDGLFFGRIDYQDKAQRLKNKEMEFIWRGSPSLGPDADIFTGVLYNHYGPPPGFCFDI 208

Query: 173 TDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQ 232
               +P+QD+P L+ YNV++ V+DF+  A  QA   R NHIM TMG DFQYQ AE WFK 
Sbjct: 209 LCGDEPIQDDPNLEDYNVDERVDDFVQYAKEQAQHYRTNHIMLTMGSDFQYQNAEMWFKN 268

Query: 233 MDKLIHYVNK 242
           MDKLI YVNK
Sbjct: 269 MDKLIKYVNK 278

The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain Back     alignment and domain information
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information
>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 930
KOG1959996 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PLN027011050 alpha-mannosidase 100.0
KOG19581129 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PRK09819875 alpha-mannosidase; Provisional 100.0
KOG43421078 consensus Alpha-mannosidase [Carbohydrate transpor 100.0
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 100.0
PF07748457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 100.0
PF01074275 Glyco_hydro_38: Glycosyl hydrolases family 38 N-te 100.0
PF0926180 Alpha-mann_mid: Alpha mannosidase, middle domain; 99.84
smart0087279 Alpha-mann_mid Alpha mannosidase, middle domain. M 99.8
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 99.19
PF03065360 Glyco_hydro_57: Glycosyl hydrolase family 57; Inte 96.88
TIGR03212297 uraD_N-term-dom putative urate catabolism protein. 89.7
PF01522123 Polysacc_deac_1: Polysaccharide deacetylase; Inter 87.16
COG1543504 Uncharacterized conserved protein [Function unknow 86.49
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.8e-204  Score=1699.11  Aligned_cols=879  Identities=47%  Similarity=0.791  Sum_probs=794.5

Q ss_pred             ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcC--CCCcceeec
Q 002366           26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFN--KTPKAGWQI   96 (930)
Q Consensus        26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG--~~p~vgW~i   96 (930)
                      =|+||++||.+||+++.++       ||++||||||||||||||||++||.|+|+||+.||+||.++||  .+|++||||
T Consensus        90 FI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqI  169 (996)
T KOG1959|consen   90 FIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQI  169 (996)
T ss_pred             eehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeee
Confidence            5999999999999999884       8999999999999999999999999999999999999999999  799999999


Q ss_pred             CCCCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCcCCCCCCCCCccccCCC
Q 002366           97 DPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDF  176 (930)
Q Consensus        97 D~FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~f~f~~~~~~  176 (930)
                      ||||||+.||+||+ +|||++.+|+||||+||+.|..++.|||+|+|++++++.++|||++|++|||+|++||||..|.|
T Consensus       170 DPFGHSreqAslfA-qmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P~gfc~dv~c~d  248 (996)
T KOG1959|consen  170 DPFGHSREQASLFA-QMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPPPGFCFDVLCGD  248 (996)
T ss_pred             CCCCcchHHHHHHH-HhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCCCCceeccccCC
Confidence            99999999999995 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHHHHHHHHHHHHHhc---CC-CeEEEeCC
Q 002366          177 DPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK---GG-RVNALYST  252 (930)
Q Consensus       177 ~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~~~~~~~li~~iN~---~~-~~~i~~sT  252 (930)
                      .|++|++.+.+|||++|++.|++.++.++.+|+|||||+|||+||+|.+|..||+||||||+|+|+   .+ ++++.|||
T Consensus       249 ~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YST  328 (996)
T KOG1959|consen  249 DPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYST  328 (996)
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcC
Confidence            999999999999999999999999999999999999999999999999999999999999999993   34 79999999


Q ss_pred             hhhHHHHHHhcCCCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHHhhcCCC--CCCCchHHHH
Q 002366          253 PSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKS--PGPTTSALGD  330 (930)
Q Consensus       253 ~~~Yf~a~~~~~~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~--~~~~~~~l~~  330 (930)
                      |+||++++|+.+..||+++.||||||+++|+||||||||||.+|++.|++++.|++|++|.++|++..  ..+.++.|++
T Consensus       329 pscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lre  408 (996)
T KOG1959|consen  329 PSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLRE  408 (996)
T ss_pred             hHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998765  4578899999


Q ss_pred             HHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCccccCCcccccCCCCCCCCC
Q 002366          331 ALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIP  410 (930)
Q Consensus       331 ~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~  410 (930)
                      +|++.|||||||||+|++|.+||+++|..|+-.|+.+++++|+.|....        ...|++|++||||+||.++.   
T Consensus       409 am~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lNiS~C~~t~~---  477 (996)
T KOG1959|consen  409 AMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLNISECAFTKD---  477 (996)
T ss_pred             HHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------CccchhhhhhccccCCCCcC---
Confidence            9999999999999999999999999999999999999999999998643        34789999999999999863   


Q ss_pred             CCCcEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEeccccccccccchhhhccCCCCCCCCcEEEEEEEe
Q 002366          411 EGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVT  490 (930)
Q Consensus       411 ~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~  490 (930)
                      .++.+.|+|||||+|.++++|+|||+.+++.|+|+.|++|++|++|+......+.          .......++|+|.|.
T Consensus       478 ~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~~eLvf~as  547 (996)
T KOG1959|consen  478 GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTKHELVFKAS  547 (996)
T ss_pred             CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCCceEEEEEE
Confidence            3678999999999999999999999999999999999999999999875433321          112345689999999


Q ss_pred             eCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccC-
Q 002366          491 VPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV-  569 (930)
Q Consensus       491 vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~-  569 (930)
                      |||+|+++|.|+..........+.............+|+|+++++.||.++|.+++|....+|.+.++.|+|.+|..+. 
T Consensus       548 vpplg~aty~i~k~~~~~~~~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g  627 (996)
T KOG1959|consen  548 VPPLGIATYFIKKVASTERGSASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRG  627 (996)
T ss_pred             ecCccceEEEEeecCcccccccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecC
Confidence            9999999999997655433211222222222334489999999999998899999999888999999999999999873 


Q ss_pred             --CCCCCCceeEcCCCCCCcccC-CCccEEEEeccceEEEEEEEcceEEEEEEEeecCCceEEEEEECCccccCCCCcEE
Q 002366          570 --DTQSSGAYIFRPNGAQPNVVS-RSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEV  646 (930)
Q Consensus       570 --~~~~sgaYiF~P~~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~  646 (930)
                        +.+.||||+|+| +..++++. ...+++|+.|||+.||++.++.||+|++|+|++.+++||||.|+|||++|..|||+
T Consensus       628 ~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEv  706 (996)
T KOG1959|consen  628 DNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEV  706 (996)
T ss_pred             CcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceE
Confidence              347799999999 44334443 35788999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccccccceEEeccceEEEEeCCcceEEEeccccccccccCceE
Q 002366          647 ISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQV  726 (930)
Q Consensus       647 ~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~i  726 (930)
                      +.||.|+|++++.|||||||++||||.+++|++|.....+|++||||||++.|+|+|++.+|+|||||+|||+|++||+|
T Consensus       707 Vtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~l  786 (996)
T KOG1959|consen  707 VTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQL  786 (996)
T ss_pred             EEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEEEeecccCccc-cccccchhhhcccceeeeecccccccccc
Q 002366          727 EIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGA-RWRRTTGQEVYSPLLLAFTQEKLETWTES  805 (930)
Q Consensus       727 elmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~~~~~~~~~-~~~~~~~~~l~~p~~~~~~~~~~~~~~~~  805 (930)
                      |||||||++.||++||||+|||+.++   ..||+++|+|++.++.....+ .++|..+.++..|.+.+|++.....+...
T Consensus       787 ElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~  863 (996)
T KOG1959|consen  787 ELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNS  863 (996)
T ss_pred             EEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhh
Confidence            99999999999999999999999886   279999999999999887765 67788999999999999987765444333


Q ss_pred             ccCccccCccCCCCCCcceEEEeeecCCCcEEEEEeeccccCCCCCcceeeeeehhhhcccCccceeeecccccccchhh
Q 002366          806 HLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLE  885 (930)
Q Consensus       806 ~~~~~s~l~~~~~lp~nv~lltlk~~~~~~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~  885 (930)
                      ...+.+.+..+..||.+|||+||++++++.+||||+|+|+++||+++|++++++|.+||..+++..++||+|+||+++++
T Consensus       864 ~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~  943 (996)
T KOG1959|consen  864 LSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSD  943 (996)
T ss_pred             cCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhh
Confidence            33333334445689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccceeeec-CCCC---CcCCCCCCCCCCC-CCceEEecCcceeEEEEEC
Q 002366          886 MKKMTWKVE-GESG---KTHSPVRGGPLDA-STLVVELGPMEIRTFLLKF  930 (930)
Q Consensus       886 ~~r~~w~~~-~~~~---~~~~~~~~~~~~~-~~~~v~l~P~eIrTf~i~~  930 (930)
                      |+|++|..+ ++..   ...++.+..|+++ +.+.|+|.|||||||+|++
T Consensus       944 mkr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~  993 (996)
T KOG1959|consen  944 MKRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKF  993 (996)
T ss_pred             hhhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEE
Confidence            999888776 3321   1333445556654 6789999999999999974

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold Back     alignment and domain information
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03212 uraD_N-term-dom putative urate catabolism protein Back     alignment and domain information
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase Back     alignment and domain information
>COG1543 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query930
1ps3_A1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 2e-60
1hxk_A1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 2e-60
3dx3_A1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 3e-60
1qwn_A1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 3e-60
1o7d_D282 The Structure Of The Bovine Lysosomal A-Mannosidase 8e-60
1qwu_A1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 1e-59
3cv5_A1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 2e-59
1hty_A1015 Golgi Alpha-Mannosidase Ii Length = 1015 2e-57
1o7d_A298 The Structure Of The Bovine Lysosomal A-Mannosidase 3e-40
1o7d_B84 The Structure Of The Bovine Lysosomal A-Mannosidase 8e-15
1o7d_C159 The Structure Of The Bovine Lysosomal A-Mannosidase 7e-14
1o7d_E126 The Structure Of The Bovine Lysosomal A-Mannosidase 1e-09
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure 
Iteration: 1

 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 204/746 (27%), Positives = 331/746 (44%), Gaps = 81/746 (10%)
Query: 56  GGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGF 115
           GGW M DEA +H+ +++ Q T G  ++KQ  N TP A W IDPFGHS    Y+L  + GF
Sbjct: 163 GGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIDPFGHSPTMPYILQ-KSGF 221
Query: 116 DSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPP--------- 165
            ++   R  Y  + +  + + LE +WR        + +FT+  P + Y  P         
Sbjct: 222 KNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKV 281
Query: 166 -SGFHFELTDDFD---PVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDD 220
              F F+    F    P +  P  +   NV    +  +D    +A + R N ++  +GDD
Sbjct: 282 CCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDD 341
Query: 221 FQYQYAESWFKQ---MDKLIHYVNKGGRVN--ALYSTPSLY----TEAKNAANGPWPLKT 271
           F+++    W  Q    ++L  ++N     N  A + T   Y     +A+ A    +P  +
Sbjct: 342 FRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLS 401
Query: 272 DDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDA 331
            D+F YADR + YW+G++TSRP  K   RVL  +  A+  L               L  A
Sbjct: 402 GDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQA 461
Query: 332 ---LGIAQHHDAVTGTAKQHTTNDYAKRLAIGXXXXXXXXXXXXXXXXXRKSGHQCTKPA 388
              L + QHHD +TGTAK H   DY +R+                    + S      P 
Sbjct: 462 RRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPS---IYSPD 518
Query: 389 STFSQCPLLNISY----CPPTEKGIPEGKNLV----VAAYNPLGWNRTDIIRIPVNDANL 440
            +FS   L +  +       +   I  G++++    V  +N L   R  ++   V+   +
Sbjct: 519 FSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFV 578
Query: 441 IVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYF 500
            V D   N +  Q   +  V S      T+    Q S    +Y ++F+  VPP+G  TY 
Sbjct: 579 SVTDLANNPVEAQ---VSPVWSWHHDTLTKTIHPQGS--TTKYRIIFKARVPPMGLATYV 633
Query: 501 I----------SRAAGKVKRRKGFFLAADS---------PQDKTVEVGPGNLKMSFSRTT 541
           +          S A+  + R+    L             P++ ++ VG G   ++FS   
Sbjct: 634 LTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGP-TLAFSE-Q 691
Query: 542 GQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNG-AQPNVVSRSVPIKIIRG 600
           G LK +  ++    VP+   FL YG       SGAY+F PNG A P  + + V + + +G
Sbjct: 692 GLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPV-VLVTKG 750
Query: 601 PMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVF 660
            +   V     S ++Q     I +  A     +  I + D+   E++ R+  ++ +  +F
Sbjct: 751 KLESSVSVGLPSVVHQT----IMRGGAPEIRNLVDIGSLDNT--EIVMRLETHIDSGDIF 804
Query: 661 YTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGAS 720
           YTD NG  F+KR R  +         P+  NYYP+  G+FI D  +  ++L  +  GG+S
Sbjct: 805 YTDLNGLQFIKRRRLDKL--------PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSS 856
Query: 721 IKDGQVEIMLHRRMLADDGRGVGEAL 746
           +  G++EIM  RR+ +DD RG+G+ +
Sbjct: 857 LASGELEIMQDRRLASDDERGLGQGV 882
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure
>pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 Back     alignment and structure
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 Back     alignment and structure
>pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 Back     alignment and structure
>pdb|1O7D|E Chain E, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 126 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query930
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 0.0
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-101
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 3e-70
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 3e-68
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 9e-67
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 7e-43
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 7e-36
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 2e-33
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  653 bits (1684), Expect = 0.0
 Identities = 212/935 (22%), Positives = 365/935 (39%), Gaps = 112/935 (11%)

Query: 55   NGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 114
             GGW M DEA +H+ +++ Q T G  ++KQ  N TP A W I PFGHS    Y+L  + G
Sbjct: 162  TGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSG 220

Query: 115  FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPP-------- 165
            F ++   R  Y  + +  + + LE +WR        + +FT+  P + Y  P        
Sbjct: 221  FKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPK 280

Query: 166  --SGFHFELTDDFD----PVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGD 219
                F F+    F            +   NV    +  +D    +A + R N ++  +GD
Sbjct: 281  VCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGD 340

Query: 220  DFQYQYAESWFKQ---MDKLIHYVNKGGR--VNALYSTPSLYTEA----KNAANGPWPLK 270
            DF+++    W  Q    ++L  ++N      V A + T   Y +A    + A    +P  
Sbjct: 341  DFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTL 400

Query: 271  TDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGD 330
            + D+F YADR + YW+G++TSRP  K   RVL  +  A+  L               L  
Sbjct: 401  SGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQ 460

Query: 331  A---LGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKP 387
            A   L + QHHD +TGTAK H   DY +R+       ++V+  S+  L ++ S +     
Sbjct: 461  ARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFS 520

Query: 388  ASTF----SQCPLLNISYCPPTEK-GIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIV 442
             S F    S+ P   +     T   G     +  V  +N L   R  ++   V+   + V
Sbjct: 521  FSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSV 580

Query: 443  KDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFIS 502
             D   N +  Q   + +   +                  +Y ++F+  VPP+G  TY ++
Sbjct: 581  TDLANNPVEAQVSPVWSWHHDTLTKTIHPQGST-----TKYRIIFKARVPPMGLATYVLT 635

Query: 503  RAAGK-----------------VKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLK 545
             +  K                       +         + + +  GN         G LK
Sbjct: 636  ISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLK 695

Query: 546  RMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDE 605
             +  ++    VP+   FL YG       SGAY+F PNG    V      + + +G +   
Sbjct: 696  SIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESS 755

Query: 606  VHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSN 665
            V     S ++Q   +            IG +        E++ R+  ++ +  +FYTD N
Sbjct: 756  VSVGLPSVVHQT-IMRGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLN 809

Query: 666  GRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQ 725
            G  F+KR R  +         P+  NYYP+  G+FI D  +  ++L  +  GG+S+  G+
Sbjct: 810  GLQFIKRRRLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGE 861

Query: 726  VEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQL---GAGARWRRTT 782
            +EIM  RR+ +DD RG+G+ + ++  V      +  + N  +  ++L   G         
Sbjct: 862  LEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKA 921

Query: 783  GQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGS------- 835
             Q +  PL      E    W  +            S   ++ +  +  L   S       
Sbjct: 922  SQSLLDPLDKFIFAE--NEWIGAQGQFGG---DHPSAREDLDVSVMRRLTKSSAKTQRVG 976

Query: 836  VLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEG 895
             +L   +L + G   E++   K+++  +    ++ + +  +L+  Q    +  M      
Sbjct: 977  YVLHRTNLMQCGTPEEHT--QKLDVCHLL--PNVARCERTTLTFLQNLEHLDGMV----- 1027

Query: 896  ESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 930
                                 E+ PME   ++   
Sbjct: 1028 -------------------APEVCPMETAAYVSSH 1043
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query930
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 100.0
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 100.0
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 100.0
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.97
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.91
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.89
1k1x_A659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 99.37
3n98_A562 Alpha-amylase, GH57 family; GH57 family member, br 97.44
3p0b_A540 TT1467 protein; glycoside hydrolase GH57, glycogen 97.43
2b5d_X528 Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. 96.35
3cl6_A308 PUUE allantoinase; URIC acid, nitrogen fixation, h 88.16
3s6o_A321 Polysaccharide deacetylase family protein; ssgcid, 86.79
3rxz_A300 Polysaccharide deacetylase; structural genomics, P 84.53
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Back     alignment and structure
Probab=100.00  E-value=1.2e-150  Score=1413.31  Aligned_cols=840  Identities=25%  Similarity=0.400  Sum_probs=700.0

Q ss_pred             ceeehhhHHHHhhhcCCcc-------cccccceEEeccceeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCC
Q 002366           26 GIQIENLCLLKWHFSIDGG-------LGKVQKYKNKNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDP   98 (930)
Q Consensus        26 ~~~~e~~~~~~w~~~~~~~-------LV~~GrlE~vgGgwv~~Dea~~~~esiIrQl~~G~~~l~~~FG~~p~vgW~iD~   98 (930)
                      =++.|+++|++||++++|+       ||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||
T Consensus       126 F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~  205 (1045)
T 3bvx_A          126 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAP  205 (1045)
T ss_dssp             EEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCS
T ss_pred             EEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCC
Confidence            3456899999999999995       799999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHhcCCcEEEEeccChHhHHhhhcCCCeEEEEEcCCCCCCCcceEEeecCc-CCCC-----CC-----C
Q 002366           99 FGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPV-HYSP-----PS-----G  167 (930)
Q Consensus        99 FGhs~~~P~il~~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~-~Y~~-----p~-----~  167 (930)
                      ||||++|||||+ +|||++++|+|++|++++.++..+.+||+|+|+++..+|++||||++|. +|+.     |+     +
T Consensus       206 FG~s~~lPqil~-~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~  284 (1045)
T 3bvx_A          206 FGHSPTMPYILQ-KSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQ  284 (1045)
T ss_dssp             SSBCTHHHHHHH-TTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGG
T ss_pred             CCccHHHHHHHH-HcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCcccccc
Confidence            999999999998 9999999999999999999999999999999766555699999999994 4653     32     4


Q ss_pred             CCccccCC---CCCccCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCeeEEEecCCCCCCchhHH---HHHHHHHHHHH
Q 002366          168 FHFELTDD---FDPVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYV  240 (930)
Q Consensus       168 f~f~~~~~---~~p~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~iL~~~G~Df~y~~a~~~---~~~~~~li~~i  240 (930)
                      |+|+.+.+   +|||.++| .++++|++++++.+++++++++..|+++++|+|+|+||+|+++..|   |+||+++|+++
T Consensus       285 fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~i  364 (1045)
T 3bvx_A          285 FDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHI  364 (1045)
T ss_dssp             GCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHH
Confidence            66766543   68887665 5678999999999999999999999999999999999999998654   99999999999


Q ss_pred             hcCC--CeEEEeCChhhHHHHHHhcC----CCCCCccCCcccccccCCCceeeeeecchhhHHHHHHHhHHHHHHHHHHH
Q 002366          241 NKGG--RVNALYSTPSLYTEAKNAAN----GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEF  314 (930)
Q Consensus       241 N~~~--~~~i~~sT~~~Yf~a~~~~~----~~~p~~~gDffpy~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~  314 (930)
                      |+.+  .++++|||+++||+++++..    ..||+++||||||++++++||+|||||||++|+++|++|++|++||+|++
T Consensus       365 n~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~a  444 (1045)
T 3bvx_A          365 NSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSA  444 (1045)
T ss_dssp             HHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCCCCceEEECCHHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9754  58999999999999998753    36999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCC---CCchHHHHHHhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCC---
Q 002366          315 LAGKKSPG---PTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPA---  388 (930)
Q Consensus       315 l~~~~~~~---~~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~---  388 (930)
                      +|...+..   ..++.+|++|+++||||+|||||+++|++||.+||.+|.+.++.+++.+++.|+..... .+....   
T Consensus       445 la~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~  523 (1045)
T 3bvx_A          445 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSY  523 (1045)
T ss_dssp             TSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCS
T ss_pred             HHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccc
Confidence            98653221   24678999999999999999999999999999999999999999999999999843211 111111   


Q ss_pred             CCccccCCcccccCCCCCCCCC-CCC---cEEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCeeeEEEEecccccccc
Q 002366          389 STFSQCPLLNISYCPPTEKGIP-EGK---NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNL  464 (930)
Q Consensus       389 ~~~~~~~~ln~s~~~~~~~~~~-~~~---~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~  464 (930)
                      ..+..|.+++.+.|+.... +. .++   ...|+|||||+|+|+++|+|+|..+.+.|+|.+|++|++|+++.......+
T Consensus       524 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~  602 (1045)
T 3bvx_A          524 FTLDDSRWPGSGVEDSRTT-IILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDT  602 (1045)
T ss_dssp             EEEECSSSSCTTTCCCCCE-ECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEET
T ss_pred             cchhhhccccccccccccc-ccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeecccccccc
Confidence            1223455566677765321 10 122   568999999999999999999999999999999999999999876432211


Q ss_pred             ccchhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecCCccc-cccccc----------ccc-CCCCCCceEecCCe
Q 002366          465 RKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVK-RRKGFF----------LAA-DSPQDKTVEVGPGN  532 (930)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~-~~~~~~----------~~~-~~~~~~~~~ieN~~  532 (930)
                      ....     .........|+|+|.++||||||++|.|........ ...+.+          ... .....+...|||++
T Consensus       603 ~~~~-----~~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~  677 (1045)
T 3bvx_A          603 LTKT-----IHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREIS  677 (1045)
T ss_dssp             TTTE-----EEEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEE
T ss_pred             cccc-----ccccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccc
Confidence            0000     000011245789999999999999999987654322 100001          000 00123347899999


Q ss_pred             E------EEEEECCCCceEEEEecCCCeeeeEEEEEEEeeccCCCCCCCceeEcCCCCCCcccCCCccEEEEeccceEEE
Q 002366          533 L------KMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEV  606 (930)
Q Consensus       533 ~------~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~~~~~sgaYiF~P~~~~~~~~~~~~~i~v~~G~l~~~v  606 (930)
                      |      +|+||+ +|.|+||+||++|+++.+.++|.+|.+..+++.||||+|+|++.+.........+.+++|||+++|
T Consensus       678 ~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev  756 (1045)
T 3bvx_A          678 LRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSV  756 (1045)
T ss_dssp             EECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEE
T ss_pred             cccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCcccccCCceEEEEeCCeEEEE
Confidence            9      999996 999999999999999999999999987645678999999998876222222467788999999999


Q ss_pred             EEEEcceEEEEEEEeecCCceEEEEEECCccccCCCCcEEEEEEEeeccCCCeEEEccCCcceeeccccccCCcCCCccc
Q 002366          607 HQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNE  686 (930)
Q Consensus       607 ~~~~~~~i~q~irL~~~~~~ie~e~~v~~i~~~d~~~~e~~~rf~t~i~s~~~fyTDsng~~~i~R~~~~~~~w~~~~~~  686 (930)
                      ++.+ ++++|++||  ++++|||+++|+.   .+..+||++++|+|+|+++..||||+|||++|+|+++.+        +
T Consensus       757 ~~~~-~~i~q~irL--~~~~ieie~~Vd~---~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~~--------~  822 (1045)
T 3bvx_A          757 SVGL-PSVVHQTIM--RGGAPEIRNLVDI---GSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK--------L  822 (1045)
T ss_dssp             EEEE-TTEEEEEEE--SSSSCEEEEEECC---TTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTT--------S
T ss_pred             EEEE-eeEEEEEEE--CCeeEEEEEEEec---CCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCCC--------C
Confidence            9999 679999999  7889999999963   334589999999999999999999999999999998643        6


Q ss_pred             cccceEEeccceEEEEeCCcceEEEeccccccccccCceEEEEEEeeccCCCCCCcccccccccccccCCCCeeEeeeEE
Q 002366          687 PVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYY  766 (930)
Q Consensus       687 pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~ss~~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~~~~~  766 (930)
                      |+++|||||+++|+|+|++.||||++||+||++|+++|+||||||||+++||+|||||+|+|+         ++++|+||
T Consensus       823 p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~  893 (1045)
T 3bvx_A          823 PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYR  893 (1045)
T ss_dssp             CGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEE
T ss_pred             CcccceEEeeeeEEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEE
Confidence            789999999999999999999999999999999999999999999999999999999999985         46899999


Q ss_pred             EeecccCcccc------------ccccchhhhcccceeeeeccccccccccccCccccCccCCCCCCcceEEEeeecCCC
Q 002366          767 LSVNQLGAGAR------------WRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDG  834 (930)
Q Consensus       767 l~~~~~~~~~~------------~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltlk~~~~~  834 (930)
                      |++++...+..            ..|..+++|++||+++++..+.  +. ....+|+++..  +|||||||+|||+++++
T Consensus       894 l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~  968 (1045)
T 3bvx_A          894 LVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--WI-GAQGQFGGDHP--SAREDLDVSVMRRLTKS  968 (1045)
T ss_dssp             EEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--CT-TBCSEECTTSC--CCCTTEEEEEEEECSCT
T ss_pred             EEEecccccccccccccccccCHHHHHHHHHHhCCcceeeccCcc--cc-cccccCCcccc--cCCCCEEEEEeEecCCC
Confidence            99987764331            2467788999999998875322  21 23556777754  89999999999999988


Q ss_pred             c-----EEEEEeec--cccCCCCCcceeeeeehhhhcccCccceeeecccccccchhhcccceeeecCCCCCcCCCCCCC
Q 002366          835 S-----VLLRLAHL--YEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGG  907 (930)
Q Consensus       835 ~-----~llRl~~~--~~~~~~~~~s~~~~v~l~~lf~~~~i~~v~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~  907 (930)
                      .     ++||| |.  |+++++.. +.+++|+|.+||..  |.+++||+|+|++.++++.                    
T Consensus       969 ~~~~~~~ll~L-~~~~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~-------------------- 1024 (1045)
T 3bvx_A          969 SAKTQRVGYVL-HRTNLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD-------------------- 1024 (1045)
T ss_dssp             TCSEEEEEEEE-EECCCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG--------------------
T ss_pred             CccCceEEEEE-eeeccccCcCcc-cCcccccHHHHhcC--cceEEEecccCCccccccC--------------------
Confidence            7     99999 65  88888765 78999999999998  9999999999998765431                    


Q ss_pred             CCCCCCceEEecCcceeEEEEEC
Q 002366          908 PLDASTLVVELGPMEIRTFLLKF  930 (930)
Q Consensus       908 ~~~~~~~~v~l~P~eIrTf~i~~  930 (930)
                          +.+.|+|+|||||||+|+|
T Consensus      1025 ----~~~~v~l~PmeirTf~i~~ 1043 (1045)
T 3bvx_A         1025 ----GMVAPEVCPMETAAYVSSH 1043 (1045)
T ss_dssp             ----GGCCCCCCTTCEEEEEEEE
T ss_pred             ----CCcceEEcCceeEEEEEEe
Confidence                1246899999999999985
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Back     alignment and structure
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Back     alignment and structure
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* Back     alignment and structure
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A Back     alignment and structure
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 Back     alignment and structure
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A Back     alignment and structure
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 Back     alignment and structure
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 930
g1o7d.2490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 1e-146
d3bvua2522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 1e-129
g1o7d.3330 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno 4e-68
d3bvua3381 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru 1e-67
d3bvua1111 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr 4e-27
g1o7d.195 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann 3e-24
d1k1xa3310 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te 1e-21
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query930
g1o7d.2490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua2522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
d3bvua3381 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.3330 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua1111 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.94
g1o7d.195 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.93
d1k1xa3310 4-alpha-glucanotransferase, N-terminal domain {Arc 99.82
d2b5dx2404 Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 96.18
d1ufaa2412 Hypothetical protein TT1467, N-terminal domain {Th 95.09
d1z7aa1301 Hypothetical protein PA1517 {Pseudomonas aeruginos 88.85
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure