Citrus Sinensis ID: 002403

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------

MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRISV

cccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEccccEEcccccccccccEEEEEccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccEEEEcccEEEEccEEEcccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEEEccccEEEEcccccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHcccccccccccHHHHHHHHHHccccccHHcccccccccHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccHHHcHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccEEEEEEcccccccc

cccccEEEEEEEHHHHHccccHHHHHHHHHHHcccEEEEEEcccEEEcccccccccccEEEEEccccccHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccEEEcccEEEEccEEEccccEEcccccccccEEEEEcccccccHHHHHHEccccccccccccccccccccEEEEEccccccccEEEEEEccccHHHHHcccccEccEEEEcccccEEEEEEEccHHHHHHHHHHHHHHHccEcccEEEEEcccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHcccccccccccccccHHEEEEEEEEEccccccccEEEEEEccHHHHHHHHHccccccccEEEEccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccHHHHHcccccccHHcccccccccccccHHHHcHcHHHccEEEEccccHHHHHHHHHHHHHHHHcccccHHHHHHEcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccHHccccHHHHHccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHccHHHHHHccccccccHHHHHHHHHHHHccEccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccccccccccccccccccccccccccccHccccccccEEcccccccccccccEcccHHHHcccccHHcccEEEEEccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccHHHHHHHEEEEEEEccccccccc

MEVHKKITIGVCVMekkvfsapmGQILDRLQAfgefevihfgdkviledpiekwpicdCLIAfyssgyplekaesyatlrkpflvnelepqhllHDRRKVYEQLEkygipvpryalvnrevpyqeldyfieeedfvevhgnrfwkpfvekpvhgddhsimiyypssagggmKELFRKvgnrssefhpdvrrvrregsyiyeefmptggtdvkvytvgpeyahaearkspvvdgvvmrnpdgkevrypvlltpneKQMAREVCIAFRQAVCgfdllrcegrsyvcdvngwsfvknsykyydDAACVLRKMFLEakaphlssaippilpwkvnepvqptegltrqgsglgtfgqsEELRCVIAVMrhgdrtpkqkVKLKVTEEKLLNLMLKYnggrpraetKLKSAVQLQDLLDAtrilvprsrpgresdseaedfeHSKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWgshsegtgllrlhstyrhdlkiyssdegrVQMSAAAFAKGLLDLEGQLTPILVSLVskdssmldgldNASIEMEEAKARLNEIIKSGSKmihsngssdcpwmadgvglppnaselLPKLVKLTKKVTEQVRQLAKDededlaetnpydvippydqakalgktnidvdriaaglpcgseGFLLMYARWRKLERDLYNErkerfditqipdvydsckydllhnahLNLEGLDELFKVAQLLAdgvipneyginpkqklKIGSKIARRLLGKLLIDLRNTREEAISVAELKssqdqvskstktekedkdyppklfikaddtrrssttsdismdqdddddketqyrldpkyanvktperhvrtrlyfTSESHIHSLMNVLRYcnldeslqgedslVCHSALERLYKTKELDYMSYIVLRMFENTAVRISV

mevhkkitigvcvmekkVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKygipvpryalvNREVPYQELDYFIEEEDFVEVHGNRFWKPFvekpvhgddHSIMIYYPSSAGGGMKELFRKVgnrssefhpdvrrvrREGSYIyeefmptggtdvkVYTVGPEYAhaearkspvvdgvvmrnpdgkevrypvlltpneKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHlssaippilpwKVNEPVQPTEGLTrqgsglgtfgqSEELRCVIAVMrhgdrtpkqkvklkvteEKLLNLMLKYNGGRPRAETKLKSAVQLQDlldatrilvprsrpgresdseaedfehskKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLakdededlaetnpydvippyDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNerkerfditqipdvYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVipneyginpkqklkigsKIARRLLGKLLIDLRNTREEAISvaelkssqdqvskstktekedkdyppklfikaddtrrssttsdismdqdddddketqyrldpkyanvktperhvRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFEntavrisv

MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQkvklkvteekllnlMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASEllpklvkltkkvtEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKAddtrrssttsdismdqdddddKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRISV

*****KITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR************VRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNE**************LGTFGQSEELRCVIAVMRHGD*****KVKLKVTEEKLLNLMLKYNG************VQLQDLLDATRIL*********************KRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVS*******************************************WMADGVG*******LLPKLVKLT***********************YDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNT*****************************************************************************RHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAV****

****KKI*IGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAI**********************************RCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLD*************************************************************************EQFYQDNGV****************LRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGS*DCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAK************************************GLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLL************************************************************************************************************************RLYFTSESHIHSLMNVLRYCNLD**************LERLYKTKELDYMSYIVLRMFENTA*****

MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRS***************SKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAE******************KDYPPKLFIKAD***********************QYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRISV

**VHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPV**T******GSGL**FGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAIS***************************LFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTA*****

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDVLLSIQCHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGxxxxxxxxxxxxxxxxxxxxxGSKMIHSNGSSDCPWMADGVGLPPNASELLPKxxxxxxxxxxxxxxxxxxxxxDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRISV

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		927	2.2.26 [Sep-21-2011]
Q9VR59		1696	Inositol hexakisphosphate	no	no	0.873	0.477	0.409	0.0
Q5XHF8		1131	Inositol hexakisphosphate	N/A	no	0.873	0.716	0.412	1e-179
O43314		1243	Inositol hexakisphosphate	yes	no	0.864	0.644	0.416	1e-178
Q5REW0		1244	Inositol hexakisphosphate	yes	no	0.864	0.643	0.418	1e-178
Q6ZQB6		1129	Inositol hexakisphosphate	yes	no	0.867	0.712	0.418	1e-178
A7Z050		1477	Inositol hexakisphosphate	no	no	0.778	0.488	0.447	1e-173
Q6PFW1		1433	Inositol hexakisphosphate	no	no	0.778	0.503	0.444	1e-172
Q5RDF1		1409	Inositol hexakisphosphate	yes	no	0.776	0.511	0.442	1e-171
P0C644		1434	Inositol hexakisphosphate	yes	no	0.773	0.5	0.436	1e-171
P91309		1323	Inositol hexakisphosphate	no	no	0.888	0.622	0.375	1e-157

>sp\|Q9VR59\|VIP1_DROME Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Drosophila melanogaster GN=l(1)G0196 PE=1 SV=2	Back alignment and function desciption

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/950 (40%), Positives = 540/950 (56%), Gaps = 140/950 (14%)

Query: 5   KKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFY 64
           K++ +G+C M KK  S PM +IL RL  F   +++ F + VIL +P++ WP CDCL++F+
Sbjct: 65  KQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPTCDCLVSFH 124

Query: 65  SSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQ 124
           S G+PLEKA  YA LR PF++N L  Q+ + DRR+VY  LEK GI +PRYA+++R+ P  
Sbjct: 125 SKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAVLDRDSPDP 184

Query: 125 ELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSE 184
           +    IE ED VEV+G  F KPFVEKPV  +DH+I IYYP+SAGGG + LFRK+G+RSS 
Sbjct: 185 KHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 244

Query: 185 FHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEV 244
           + P+  RVR+ GS+IYE+FMPT GTDVKVYTVGP+YAHAEARKSP +DG V R+ +GKE+
Sbjct: 245 YSPE-SRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEI 303

Query: 245 RYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAAC 304
           RYPV+L  +EK ++R+VC+AF+Q VCGFDLLR  G+SYVCDVNG+SFVKNS KYYDD A 
Sbjct: 304 RYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAK 363

Query: 305 VLRKMFLEAKAPHLSSAIPPILPWKVNEP-VQPTEGLTRQGSGLGTFGQSEELRCVIAVM 363
           +L  M L    P L   IP  +P+++++P + PT           TFG+  ELRCV+AV+
Sbjct: 364 ILGNMILRELTPTLH--IPWSVPFQLDDPPIVPT-----------TFGKMMELRCVVAVI 410

Query: 364 RHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRP 423
           RHGDRTPKQK+K++V   K   +  KY+G +     KLK   QLQ++LD  R L+     
Sbjct: 411 RHGDRTPKQKMKVEVRHPKFFEIFEKYDGYK-LGHVKLKRPKQLQEILDIARFLLSEIHT 469

Query: 424 GRESDSEAEDFEHSKKRIICVAILHLGGQFEKF------------FNVQDVLLS----IQ 467
              ++ E ++ +  + + +     H  G   K              +  D  L+    ++
Sbjct: 470 KAHAEIEEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVE 529

Query: 468 CHLLLANLVSGQFIDFLIEQFYQDNGVNEIAYWWG------SHSEGTGLLRLHSTYRHDL 521
             L+L     G+       Q  +   +    Y  G      S ++G GLLRLHST+RHDL
Sbjct: 530 PSLVLILKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDL 589

Query: 522 KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLV--SKDSSMLDGLDNASIEMEEAKA 579
           KIY+SDEGRVQM+AAAFAKGLL LEG+LTPILV +V  +  + +LD   ++S     AK 
Sbjct: 590 KIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKG 649

Query: 580 RLNEII-------KSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVR 632
           RL+E++       K   ++I+   S       D V  P +    +  L++    +    +
Sbjct: 650 RLHELMQNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKK 709

Query: 633 QLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLE 692
              K +D  L     +D                                 LM  RW K+E
Sbjct: 710 DDPKTKDAILYHGETWD---------------------------------LMRCRWEKIE 736

Query: 693 RDLYNERKERFDITQIPDVYDSCKYDLLHNAH-LNLEGLDELFKVAQLLADGVIPNEYGI 751
           +D ++ + + FDI++IPD+YD  KYDL HN H L  +  +EL+  A+ LAD VIP EYG+
Sbjct: 737 KD-FSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAEELYIYAKNLADIVIPQEYGL 795

Query: 752 NPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPK 811
            P++KL IG  I   LL K                                         
Sbjct: 796 TPQEKLAIGQGICSPLLRK----------------------------------------- 814

Query: 812 LFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYAN-VKTPERHVRTRLYFTSESHI 870
             IK D  R        ++D+ +D   E   RL+P Y++ V +P+RHVRTRLYFTSESH+
Sbjct: 815 --IKGDLQR--------NIDEVED---EFMNRLNPHYSHGVASPQRHVRTRLYFTSESHV 861

Query: 871 HSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFEN 920
           HSL+ VLRY  L   +  E       A++ +    EL+YMS IV+ ++E+
Sbjct: 862 HSLLTVLRYGGLLNVVTDEQ---WRRAMDYISMVSELNYMSQIVIMLYED 908

Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 4EC: .EC: 2EC: 4

>sp\|Q5XHF8\|VIP2_XENLA Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Xenopus laevis GN=ppip5k2 PE=2 SV=1	Back alignment and function description

>sp\|O43314\|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3	Back alignment and function description

>sp\|Q5REW0\|VIP2_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Pongo abelii GN=PPIP5K2 PE=2 SV=1	Back alignment and function description

>sp\|Q6ZQB6\|VIP2_MOUSE Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Mus musculus GN=Ppip5k2 PE=1 SV=3	Back alignment and function description

>sp\|A7Z050\|VIP1_BOVIN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Bos taurus GN=PPIP5K1 PE=2 SV=1	Back alignment and function description

>sp\|Q6PFW1\|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1	Back alignment and function description

>sp\|Q5RDF1\|VIP1_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Pongo abelii GN=PPIP5K1 PE=2 SV=1	Back alignment and function description

>sp\|P0C644\|VIP1_RAT Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus GN=Ppip5k1 PE=1 SV=1	Back alignment and function description

>sp\|P91309\|VIP1_CAEEL Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Caenorhabditis elegans GN=F46F11.1 PE=3 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		927
255552826		1054	acid phosphatase, putative [Ricinus comm	0.985	0.867	0.846	0.0
224080003		1061	predicted protein [Populus trichocarpa]	0.980	0.856	0.833	0.0
356568616		1053	PREDICTED: inositol hexakisphosphate and	0.992	0.873	0.830	0.0
359488777		1051	PREDICTED: inositol hexakisphosphate and	0.982	0.866	0.826	0.0
224140923		1038	predicted protein [Populus trichocarpa]	0.971	0.868	0.831	0.0
356529953		1059	PREDICTED: inositol hexakisphosphate and	0.990	0.866	0.824	0.0
357501599		1052	Inositol hexakisphosphate and diphosphoi	0.989	0.871	0.827	0.0
124359918		1058	Histidine acid phosphatase [Medicago tru	0.979	0.858	0.813	0.0
18417557		1049	phosphoglycerate mutase-like protein [Ar	0.988	0.873	0.796	0.0
334187693		1059	phosphoglycerate mutase-like protein [Ar	0.983	0.861	0.8	0.0

>gi\|255552826\|ref\|XP_002517456.1\| acid phosphatase, putative [Ricinus communis] gi\|223543467\|gb\|EEF44998.1\| acid phosphatase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1585 bits (4105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 789/932 (84%), Positives = 836/932 (89%), Gaps = 18/932 (1%)

Query: 7   ITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSS 66
           I IGVCVMEKKV SAPMGQI+DRLQAFGEFE+IHFGDKVI EDPIE WPICDCLIAFYSS
Sbjct: 12  IKIGVCVMEKKVLSAPMGQIMDRLQAFGEFEIIHFGDKVIAEDPIESWPICDCLIAFYSS 71

Query: 67  GYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQEL 126
           GYPLEKAE+YA LRKPFLVNELEPQHLLHDRRKVY++LE YGIPVPRYALVNRE PYQEL
Sbjct: 72  GYPLEKAEAYAALRKPFLVNELEPQHLLHDRRKVYQRLEMYGIPVPRYALVNREFPYQEL 131

Query: 127 DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFH 186
           DYF EEEDFVEVHGNRFWKPFVEKP+ GD+HSIMIYYPSSAGGGMKELFRKVGNRSSEFH
Sbjct: 132 DYFSEEEDFVEVHGNRFWKPFVEKPIDGDNHSIMIYYPSSAGGGMKELFRKVGNRSSEFH 191

Query: 187 PDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY 246
           P+VRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY
Sbjct: 192 PEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY 251

Query: 247 PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL 306
           PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL
Sbjct: 252 PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL 311

Query: 307 RKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSG-LGTFGQSEELRCVIAVMRH 365
           RKMFL+AKAPHLSS IPP LPWK+NEPVQP+EGLTRQGSG +GTFGQSEELRCVI VMRH
Sbjct: 312 RKMFLDAKAPHLSSTIPPTLPWKINEPVQPSEGLTRQGSGIIGTFGQSEELRCVITVMRH 371

Query: 366 GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGR 425
           GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPR+ETKLKSA+QLQDLLDATRILVPR RPGR
Sbjct: 372 GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRSETKLKSAIQLQDLLDATRILVPRIRPGR 431

Query: 426 ESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDV--LLSIQCHLLLANLVSGQFIDF 483
           ESDSEAED EH++K     A+L  GG F   +    +  L  ++           + ++ 
Sbjct: 432 ESDSEAEDIEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKIPKSTGEAEEERPVEA 491

Query: 484 LIEQFYQDNGV---------NEIAYWWGSH---SEGTGLLRLHSTYRHDLKIYSSDEGRV 531
           L+   Y   GV          E+  ++ ++    EGTGLLRLHSTYRHDLKIYSSDEGRV
Sbjct: 492 LMVLKY--GGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRV 549

Query: 532 QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKM 591
           QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNAS EMEEAKARLNEII S +K 
Sbjct: 550 QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASSEMEEAKARLNEIITSSTKA 609

Query: 592 IHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVI 651
            +SN S + PWM DG GLPPNASELLP+LVKLTKKVTEQVR LAKDEDE+L ET+ Y+VI
Sbjct: 610 ANSNESPEFPWMTDGAGLPPNASELLPELVKLTKKVTEQVRLLAKDEDEELTETSSYNVI 669

Query: 652 PPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDV 711
           PPYDQAKALGK NIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERK+RFDITQIPDV
Sbjct: 670 PPYDQAKALGKINIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKDRFDITQIPDV 729

Query: 712 YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKL 771
           YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGK+
Sbjct: 730 YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKI 789

Query: 772 LIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKADDTRRSSTTSDISMD 831
           LIDLRNTREEAISVAELKS+QDQ S STK EKED DY  KLFIK +DTRR+S TS+IS D
Sbjct: 790 LIDLRNTREEAISVAELKSNQDQHSTSTKNEKEDADYQSKLFIKNEDTRRTS-TSEISTD 848

Query: 832 QDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYCNLDESLQGEDS 891
            DDDDDKET+YRLDPKYANVKTPERHVRTRLYFTSESHIHSL+NVLRYCNLDESLQ EDS
Sbjct: 849 HDDDDDKETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLVNVLRYCNLDESLQEEDS 908

Query: 892 LVCHSALERLYKTKELDYMSYIVLRMFENTAV 923
           LVCH+ALERL+KTKELDYMSYIVLRMFENT V
Sbjct: 909 LVCHNALERLHKTKELDYMSYIVLRMFENTEV 940

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224080003\|ref\|XP_002305988.1\| predicted protein [Populus trichocarpa] gi\|222848952\|gb\|EEE86499.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356568616\|ref\|XP_003552506.1\| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max]	Back alignment and taxonomy information

>gi\|359488777\|ref\|XP_002282227.2\| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224140923\|ref\|XP_002323826.1\| predicted protein [Populus trichocarpa] gi\|222866828\|gb\|EEF03959.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356529953\|ref\|XP_003533550.1\| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max]	Back alignment and taxonomy information

>gi\|357501599\|ref\|XP_003621088.1\| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula] gi\|355496103\|gb\|AES77306.1\| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|124359918\|gb\|ABN07938.1\| Histidine acid phosphatase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|18417557\|ref\|NP_568308.1\| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi\|25054864\|gb\|AAN71921.1\| unknown protein [Arabidopsis thaliana] gi\|332004729\|gb\|AED92112.1\| phosphoglycerate mutase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187693\|ref\|NP_001190313.1\| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi\|332004730\|gb\|AED92113.1\| phosphoglycerate mutase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		927
TAIR\|locus:2102057		1056	AT3G01310 [Arabidopsis thalian	0.985	0.865	0.755	0.0
UNIPROTKB\|E1BXR8		1179	PPIP5K1 "Uncharacterized prote	0.444	0.349	0.527	7e-178
UNIPROTKB\|B7WPL9		1429	PPIP5K1 "Inositol hexakisphosp	0.450	0.292	0.520	3.8e-177
MGI\|MGI:2443281		1436	Ppip5k1 "diphosphoinositol pen	0.462	0.298	0.516	4.9e-177
UNIPROTKB\|A7Z050		1477	PPIP5K1 "Inositol hexakisphosp	0.450	0.283	0.522	4.9e-177
UNIPROTKB\|J9NS35		1528	PPIP5K1 "Uncharacterized prote	0.450	0.273	0.522	4.9e-177
UNIPROTKB\|J9P7K0		1406	PPIP5K1 "Uncharacterized prote	0.450	0.297	0.522	4.9e-177
RGD\|1311552		1434	Ppip5k1 "diphosphoinositol pen	0.450	0.291	0.522	8e-177
UNIPROTKB\|D4A214		1413	Hisppd2a "Protein Hisppd2a" [R	0.450	0.295	0.522	8e-177
UNIPROTKB\|P0C644		1434	Ppip5k1 "Inositol hexakisphosp	0.450	0.291	0.522	8e-177

TAIR\|locus:2102057 AT3G01310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3589 (1268.5 bits), Expect = 0., P = 0.
 Identities = 715/946 (75%), Positives = 784/946 (82%)

Query:     3 VHKKITIGVCVMEKKV------FSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPI 56
             V +KI IGVCVMEKKV      FSAPMG+ILDRLQ+FGEFE++HFGDKVILEDPIE WPI
Sbjct:    10 VGEKIKIGVCVMEKKVKCGSEVFSAPMGEILDRLQSFGEFEILHFGDKVILEDPIESWPI 69

Query:    57 CDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYAL 116
             CDCLIAF+SSGYPLEKA++YA LRKPFLVNEL+PQ+LLHDRRKVYE LE YGIPVPRYA 
Sbjct:    70 CDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPRYAC 129

Query:   117 VNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 176
             VNR+VP Q+L YF+EEEDFVEVHG RFWKPFVEKPV+GDDHSIMIYYPSSAGGGMKELFR
Sbjct:   130 VNRKVPNQDLHYFVEEEDFVEVHGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKELFR 189

Query:   177 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 236
             K+GNRSSEFHPDVRRVRREGSYIYEEFM TGGTDVKVYTVGPEYAHAEARKSPVVDGVVM
Sbjct:   190 KIGNRSSEFHPDVRRVRREGSYIYEEFMATGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 249

Query:   237 RNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSY 296
             RN DGKEVRYPVLLTP EKQMAREVCIAFRQAVCGFDLLR EG SYVCDVNGWSFVKNSY
Sbjct:   250 RNTDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVKNSY 309

Query:   297 KYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGL-GTFGQSEE 355
             KYYDDAACVLRKM L+AKAPHLSS +PP LPWKVNEPVQ  EGLTRQGSG+ GTFGQSEE
Sbjct:   310 KYYDDAACVLRKMCLDAKAPHLSSTLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQSEE 369

Query:   356 LRCVIAVMRHGDRTPKQXXXXXXXXXXXXXXMLKYNGGRPRAETKLKSAVQLQDLLDATR 415
             LRCVIAV+RHGDRTPKQ              MLKYNGG+PRAETKLKSAVQLQDLLDATR
Sbjct:   370 LRCVIAVVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLDATR 429

Query:   416 ILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFN-VQDVLLSIQCHLLLAN 474
             +LVPR+RPGRESDS+AED EH++K     A+L  GG F   +  VQ  L  ++   +  +
Sbjct:   430 MLVPRTRPGRESDSDAEDLEHAEKLRQVKAVLEEGGHFSGIYRKVQ--LKPLKWVKIPKS 487

Query:   475 LVSGQF---IDFLIEQFYQD-------NGVNEIAYWWGSH---SEGTGLLRLHSTYRHDL 521
                G+    ++ L+   Y             E+  ++ ++    EGTGLLRLHSTYRHDL
Sbjct:   488 DGDGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDL 547

Query:   522 KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARL 581
             KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEME AKARL
Sbjct:   548 KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEAAKARL 607

Query:   582 NEIIKSGSKMIHSN--GSSDCPWMADGVGLPPNASEXXXXXXXXXXXXXEQVRQLAKDED 639
             NEI+ SG+KMI  +   S D PWM DG GLPPNA E             EQVR LA DED
Sbjct:   608 NEIVTSGTKMIDDDQVSSEDFPWMTDGAGLPPNAHELLRELVKLTKNVTEQVRLLAMDED 667

Query:   640 EDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNER 699
             E+L E  PYD+IPPYDQAKALGKTNID DRIA+GLPCGSEGFLLM+ARW KL RDLYNER
Sbjct:   668 ENLTE--PYDIIPPYDQAKALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLYNER 725

Query:   700 KERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKI 759
             K+RFDITQIPDVYDSCKYDLLHN+HL+L+GLDELFKVAQLLADGVIPNEYGINP+QKLKI
Sbjct:   726 KDRFDITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQKLKI 785

Query:   760 GSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKAXXX 819
             GSKIARRL+GK+LIDLRNTREEA+SVAELK SQ+QV   + +++ED++  PKLFI +   
Sbjct:   786 GSKIARRLMGKILIDLRNTREEALSVAELKESQEQVLSLSASQREDRNSQPKLFINSDEL 845

Query:   820 XXXXXXXXXXXXXXXXXXKETQYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRY 879
                               KET+YRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRY
Sbjct:   846 RRPGTGDKDEDDD-----KETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRY 900

Query:   880 CNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRI 925
             CNLDESL GE+SL+C +ALERL KTKELDYMSYIVLR+FENT V +
Sbjct:   901 CNLDESLLGEESLICQNALERLCKTKELDYMSYIVLRLFENTEVSL 946

GO:0003993 "acid phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=RCA

UNIPROTKB\|E1BXR8 PPIP5K1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|B7WPL9 PPIP5K1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:2443281 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|A7Z050 PPIP5K1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|J9NS35 PPIP5K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|J9P7K0 PPIP5K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

RGD\|1311552 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|D4A214 Hisppd2a "Protein Hisppd2a" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|P0C644 Ppip5k1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.4	0.766
4th Layer	2.7.4.21	0.824
4th Layer	2.7.4.24	0.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_IV0352	hypothetical protein (1062 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		927
pfam00328		327	pfam00328, His_Phos_2, Histidine phosphatase super	2e-16
cd07061		242	cd07061, HP_HAP_like, Histidine phosphatase domain	1e-08
COG0189		318	COG0189, RimK, Glutathione synthase/Ribosomal prot	8e-07
pfam08443		190	pfam08443, RimK, RimK-like ATP-grasp domain	2e-05
TIGR00768		277	TIGR00768, rimK_fam, alpha-L-glutamate ligases, Ri	4e-05
pfam00328		327	pfam00328, His_Phos_2, Histidine phosphatase super	1e-04
pfam00328		327	pfam00328, His_Phos_2, Histidine phosphatase super	0.002
cd07040		153	cd07040, HP, Histidine phosphatase domain found in	0.002

>gnl\|CDD\|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2)	Back alignment and domain information

 Score = 81.3 bits (201), Expect = 2e-16
 Identities = 55/272 (20%), Positives = 88/272 (32%), Gaps = 78/272 (28%)

Query: 509 GLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLD 568
           GLL        ++ I SSD  R   SA AF  GL   EG            D+ +LD   
Sbjct: 73  GLLPDGYPP-SEVYIRSSDSNRTLASAQAFLAGLFPPEG----------DIDNDLLDWQP 121

Query: 569 NASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVT 628
              + + E K  L  ++          G   CP   +                 + K+V 
Sbjct: 122 IPVVTLPEVKKALANLLLL--------GYDSCPAFDE---------------SLVEKRVD 158

Query: 629 EQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARW 688
            ++ +L     E +A+                G+TN+                      W
Sbjct: 159 PELAKLLAVYLEPIAKRL---------SQLLPGETNLT-----------------GLDVW 192

Query: 689 RKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNE 748
             L+  L+       D +  PD++    YD LH  +L+   L+E + ++           
Sbjct: 193 ALLDLCLFE--TNASDNSPFPDLFTG--YDALHLEYLSD--LEEYYGLS----------- 235

Query: 749 YGINPKQKLKIGSKIARRLLGKLLIDLRNTRE 780
            GI P+    IG  +   LL +L   L   + 
Sbjct: 236 -GIGPELAKLIGGPLLNELLKRLTNALVPDQT 266

The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Length = 327

>gnl\|CDD\|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction	Back alignment and domain information

>gnl\|CDD\|223267 COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|117020 pfam08443, RimK, RimK-like ATP-grasp domain	Back alignment and domain information

>gnl\|CDD\|233121 TIGR00768, rimK_fam, alpha-L-glutamate ligases, RimK family	Back alignment and domain information

>gnl\|CDD\|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2)	Back alignment and domain information

>gnl\|CDD\|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2)	Back alignment and domain information

>gnl\|CDD\|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		927
KOG1057		1018	consensus Arp2/3 complex-interacting protein VIP1/	100.0
COG0189		318	RimK Glutathione synthase/Ribosomal protein S6 mod	99.96
PF08443		190	RimK: RimK-like ATP-grasp domain; InterPro: IPR013	99.94
PRK10446		300	ribosomal protein S6 modification protein; Provisi	99.92
PLN02941		328	inositol-tetrakisphosphate 1-kinase	99.92
TIGR00768		277	rimK_fam alpha-L-glutamate ligases, RimK family. T	99.9
TIGR02144		280	LysX_arch Lysine biosynthesis enzyme LysX. The fam	99.88
PRK05246		316	glutathione synthetase; Provisional	99.88
TIGR01380		312	glut_syn glutathione synthetase, prokaryotic. This	99.88
PRK12458		338	glutathione synthetase; Provisional	99.85
PF00328		347	His_Phos_2: Histidine phosphatase superfamily (bra	99.76
TIGR02291		317	rimK_rel_E_lig alpha-L-glutamate ligase-related pr	99.76
TIGR03103		547	trio_acet_GNAT GNAT-family acetyltransferase TIGR0	99.73
PRK01372		304	ddl D-alanine--D-alanine ligase; Reviewed	99.71
PRK14016		727	cyanophycin synthetase; Provisional	99.68
TIGR02068		864	cya_phycin_syn cyanophycin synthetase. Cyanophycin	99.66
PRK02471		752	bifunctional glutamate--cysteine ligase/glutathion	99.61
PRK14571		299	D-alanyl-alanine synthetase A; Provisional	99.53
TIGR01205		315	D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a	99.51
TIGR01435		737	glu_cys_lig_rel glutamate--cysteine ligase/gamma-g	99.51
PF02955		173	GSH-S_ATP: Prokaryotic glutathione synthetase, ATP	99.45
PRK14569		296	D-alanyl-alanine synthetase A; Provisional	99.42
PRK01966		333	ddl D-alanyl-alanine synthetase A; Reviewed	99.35
PRK12767		326	carbamoyl phosphate synthase-like protein; Provisi	99.35
PRK06849		389	hypothetical protein; Provisional	99.34
TIGR01142		380	purT phosphoribosylglycinamide formyltransferase 2	99.32
PRK14570		364	D-alanyl-alanine synthetase A; Provisional	99.29
PRK14572		347	D-alanyl-alanine synthetase A; Provisional	99.27
PRK14568		343	vanB D-alanine--D-lactate ligase; Provisional	99.27
PRK13790		379	phosphoribosylamine--glycine ligase; Provisional	99.21
PF05770		307	Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-	99.15
TIGR01161		352	purK phosphoribosylaminoimidazole carboxylase, Pur	99.12
PRK09288		395	purT phosphoribosylglycinamide formyltransferase 2	99.11
PF13535		184	ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A	99.09
PRK00885		420	phosphoribosylamine--glycine ligase; Provisional	99.06
cd07061		242	HP_HAP_like Histidine phosphatase domain found in	99.05
PRK07206		416	hypothetical protein; Provisional	99.03
PRK06019		372	phosphoribosylaminoimidazole carboxylase ATPase su	98.99
PRK05294		1066	carB carbamoyl phosphate synthase large subunit; R	98.97
PRK05586		447	biotin carboxylase; Validated	98.95
PRK08462		445	biotin carboxylase; Validated	98.93
PRK02186		887	argininosuccinate lyase; Provisional	98.93
PRK07178		472	pyruvate carboxylase subunit A; Validated	98.93
PRK08463		478	acetyl-CoA carboxylase subunit A; Validated	98.91
TIGR01369		1050	CPSaseII_lrg carbamoyl-phosphate synthase, large s	98.9
PRK08591		451	acetyl-CoA carboxylase biotin carboxylase subunit;	98.89
TIGR00877		423	purD phosphoribosylamine--glycine ligase. This enz	98.89
PRK08654		499	pyruvate carboxylase subunit A; Validated	98.88
KOG1057		1018	consensus Arp2/3 complex-interacting protein VIP1/	98.88
PRK06111		450	acetyl-CoA carboxylase biotin carboxylase subunit;	98.88
PRK06395		435	phosphoribosylamine--glycine ligase; Provisional	98.86
PF02655		161	ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806	98.84
TIGR00514		449	accC acetyl-CoA carboxylase, biotin carboxylase su	98.77
TIGR01235		1143	pyruv_carbox pyruvate carboxylase. This enzyme pla	98.76
PF14397		285	ATPgrasp_ST: Sugar-transfer associated ATP-grasp	98.76
PRK14573		809	bifunctional D-alanyl-alanine synthetase A/UDP-N-a	98.74
PF15632		329	ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa	98.73
PRK12815		1068	carB carbamoyl phosphate synthase large subunit; R	98.72
PLN02948		577	phosphoribosylaminoimidazole carboxylase	98.7
PLN02257		434	phosphoribosylamine--glycine ligase	98.69
PRK12833		467	acetyl-CoA carboxylase biotin carboxylase subunit;	98.66
PRK12999		1146	pyruvate carboxylase; Reviewed	98.61
PF07478		203	Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In	98.6
PRK05294		1066	carB carbamoyl phosphate synthase large subunit; R	98.57
PLN02735		1102	carbamoyl-phosphate synthase	98.54
PF02750		203	Synapsin_C: Synapsin, ATP binding domain; InterPro	98.51
PLN02735		1102	carbamoyl-phosphate synthase	98.51
PRK06524		493	biotin carboxylase-like protein; Validated	98.51
PRK13789		426	phosphoribosylamine--glycine ligase; Provisional	98.47
COG1181		317	DdlA D-alanine-D-alanine ligase and related ATP-gr	98.46
COG1821		307	Predicted ATP-utilizing enzyme (ATP-grasp superfam	98.46
TIGR01369		1050	CPSaseII_lrg carbamoyl-phosphate synthase, large s	98.44
TIGR02712		1201	urea_carbox urea carboxylase. Members of this fami	98.34
PRK12815		1068	carB carbamoyl phosphate synthase large subunit; R	98.27
PRK05784		486	phosphoribosylamine--glycine ligase; Provisional	98.24
PF14398		262	ATPgrasp_YheCD: YheC/D like ATP-grasp	98.16
COG0439		449	AccC Biotin carboxylase [Lipid metabolism]	97.71
COG2232		389	Predicted ATP-dependent carboligase related to bio	97.59
PRK13278		358	purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D	97.59
PF02786		211	CPSase_L_D2: Carbamoyl-phosphate synthase L chain,	97.43
PRK13277		366	5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo	97.26
COG0458		400	CarB Carbamoylphosphate synthase large subunit (sp	96.96
PF02222		172	ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T	96.81
), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071		194	GARS_A: Phosphoribosylglycinamide synthetase, ATP-	96.42
COG0027		394	PurT Formate-dependent phosphoribosylglycinamide f	96.34
KOG3895		488	consensus Synaptic vesicle protein Synapsin [Signa	96.2
COG0026		375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.75
PF14305		239	ATPgrasp_TupA: TupA-like ATPgrasp	95.27
COG3919		415	Predicted ATP-grasp enzyme [General function predi	93.01
KOG3672		487	consensus Histidine acid phosphatase [General func	91.65
PF14243		130	DUF4343: Domain of unknown function (DUF4343)	88.71
COG1038		1149	PycA Pyruvate carboxylase [Energy production and c	85.34
COG0151		428	PurD Phosphoribosylamine-glycine ligase [Nucleotid	83.34
PRK00696		388	sucC succinyl-CoA synthetase subunit beta; Provisi	80.26

>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]	Back alignment and domain information

Probab=100.00  E-value=5e-275  Score=2292.81  Aligned_cols=866  Identities=55%  Similarity=0.849  Sum_probs=783.4

Q ss_pred             CCeeEEEEeecCcccCChhHHHHHHHhhcCCceEEEEeCCceeecCCCcccCCcCeeeccccCCCchHHHHHHHHhcCCc
Q 002403            4 HKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPF   83 (927)
Q Consensus         4 ~~~~~iGVCam~~Ka~SkPm~~IL~rL~~~~~f~viiF~d~vIL~e~ve~wP~~D~lIsf~s~gfpl~kai~y~~lr~p~   83 (927)
                      .++|+||||||++|++||||++||+||+.+++|++|||+|+|||+|||||||.|||||||||+||||+||++|++||+||
T Consensus        38 ~r~i~vGICaM~kK~~SKPm~~il~rli~f~~~~~vvf~e~viL~EpVENWP~CdcLIsFhSsGFPLdKAiaY~kLRnPF  117 (1018)
T KOG1057|consen   38 ERQIVVGICAMAKKSKSKPMKEILERLILFKYITVVVFEEEVILREPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPF  117 (1018)
T ss_pred             ccceEEEEeechhhhccChHHHHHHHHHhcceeEEEEeccceeeccccccCcccceEEEeccCCCChHHHHHHHHhcCCe
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCchhhhHhhhHHHHHHHHHhCCCCCCCEEEEeccCCCccccccccccceeeecCeeccCcEEEeeccccCcceeEEe
Q 002403           84 LVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYY  163 (927)
Q Consensus        84 ~iNdl~~q~~l~DR~~~lqiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYy  163 (927)
                      +||||.||+++||||.||+||++.|||+|++.+++|++|+++.+.+++.+|+++|||++|.||||||||+||||||||||
T Consensus       118 viNdL~mQyll~DRR~Vy~iLe~~gI~~PRya~~nr~~pn~~~~~lie~eD~vEVnGevf~KPFVEKPVs~EDHNIYIYY  197 (1018)
T KOG1057|consen  118 VINDLDMQYLLQDRREVYSILEAEGIPLPRYAILNRDPPNPKLCNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNIYIYY  197 (1018)
T ss_pred             eeccccHHHHHHHHHHHHHHHHHcCCCCceeEeecCCCCChHHhhhhcCCCeEEEcceeccCCcccCCCCcccccEEEEe
Confidence            99999999999999999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhhcCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCc
Q 002403          164 PSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKE  243 (927)
Q Consensus       164 p~~~GgG~~rLfrki~n~sS~~~~~~~~~r~~gsyIyeEFi~~~G~DIKvytVG~~~vhAe~RkSPv~dG~vrrN~~gke  243 (927)
                      |+|+|||.+||||||||+||+|+|++ .+|+.|||||||||+|+|||||||||||+|+|||+|||||+||+|+||+||||
T Consensus       198 PsSaGGGsqrLFRKIgnRSS~y~P~~-~vRkeGSyIYEeFMptdgtDVKvYTVGp~YaHAEaRKSPvvDGkV~Rns~GKE  276 (1018)
T KOG1057|consen  198 PSSAGGGSQRLFRKIGNRSSEYHPDS-SVRKEGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPVVDGKVERNSDGKE  276 (1018)
T ss_pred             cCCCCccHHHHHHHhcccccccCCcc-ccccccceehhhhcCCCCccceEEeeCcchhhhhhccCccccceeeecCCCce
Confidence            99999999999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeeCCHHHHHHHHHHHHHhCCceeEEEEEeeCCCcEEEecCCccccccchhhHHHHHHHHHHHHHHhhCCCCCCCCC
Q 002403          244 VRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIP  323 (927)
Q Consensus       244 ~r~~v~Lt~eEk~iA~k~~~afgq~VcGfDlLRs~~~syV~DVNGwSFVK~n~~YYd~cA~iL~~~~l~~~~~~~~~~~~  323 (927)
                      +||||.||++||.||+|||.||+|+||||||||++|+|||||||||||||||+|||||||+||++||+.+.+++..+.+|
T Consensus       277 vRYpv~Ls~~EK~iA~KVciAF~Q~VCGFDLLRa~G~SYVcDVNGfSFVKns~kYYDd~AkIL~~~~~~ak~~~~~~~iP  356 (1018)
T KOG1057|consen  277 VRYPVILNSSEKQIARKVCIAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAKILGKMNLSARALAPASQIP  356 (1018)
T ss_pred             eeceeecChhhHHHHhHHHhhccccccchHHhhcCCceEEEeccceeeeecchhhhHHHHHHHhhhhhhhhccCccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888888


Q ss_pred             CCCCCCCCCCCCCCCCcccCCCCCCCCCCccceEEEEEEEEcCCCCcccceeEEechHHHHHHHHhhcCCCCccceeecc
Q 002403          324 PILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKS  403 (927)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLr~vvaViRHgDRTPKQK~K~~~~~~~fi~l~~~~~~~~~~~e~klk~  403 (927)
                      +++||..+++   .+++.+     +++++++|||||||||||||||||||||++|++++||+||++|+|++ ++|+|||+
T Consensus       357 ~~~p~~~~~~---~~~~v~-----~~~g~~~elrcviaViRHgDRTPKQK~K~~vt~~~f~~L~ek~~G~~-~~e~klk~  427 (1018)
T KOG1057|consen  357 WSLPGIRNEK---VEPWVP-----TSSGGMMELRCVIAVIRHGDRTPKQKMKLSVTSPKFLGLFEKYDGYK-KEETKLKS  427 (1018)
T ss_pred             CCCcccccCC---CCCcee-----cCCCccceeeeeEEEEecCCCCccceeeEEeccHHHHHHHHhhCCcc-ccceeeCC
Confidence            8888877654   233444     35679999999999999999999999999999999999999999866 78999999


Q ss_pred             hHhHHHHHHHHHhhccccCCCCCCCCcchhhhhhhhhHHHHHHHhhCCCCCCccc-cccchhhhhhhcccccccCCCcce
Q 002403          404 AVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFN-VQDVLLSIQCHLLLANLVSGQFID  482 (927)
Q Consensus       404 ~~qLq~vld~~~~~l~~~~~g~~~~~~~~~~e~~~kl~ql~~vLe~~~~fsGinr-vQlKp~~~~~~~~~~~~~~~~~~~  482 (927)
                      |+|||+|||++|.++++.+     ++++++.|...||+||++||||||||||||| |||||+.| +..++++++.++...
T Consensus       428 ~~QLq~vLd~ar~ll~e~~-----~~~~~die~~~KleQlk~vLE~~ghFsGinrKVQlk~l~~-~~~k~se~e~~r~~~  501 (1018)
T KOG1057|consen  428 ANQLQEVLDAARLLLEEKE-----DKDAEDIEEAKKLEQLKNVLEMYGHFSGINRKVQLKPLKW-VYVKKSEGELEREPQ  501 (1018)
T ss_pred             HHHHHHHHHHHHhhhcccc-----cCcccchhhHHHHHHHHHHHHhhCCCCCccceeeeeeccc-cCCCCCccccccCcc
Confidence            9999999999999998754     2234445667899999999999999999999 99999999 555666666666688


Q ss_pred             eEEEEeccCcch---------hhHHHhhc--c-CCCCCchhhhcccccccceEeecCCchHHHHHHHHHhhhcccCCCCC
Q 002403          483 FLIEQFYQDNGV---------NEIAYWWG--S-HSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLT  550 (927)
Q Consensus       483 ~~LI~KW~~GGe---------e~LG~~fR--Y-p~~~~gLlrLhst~rhDlKIysSdEgRVq~TAaaFakg~L~legelt  550 (927)
                      ++||+||  |||         |+|||.||  | +|+|+|||||||||||||||||||||||||||||||||||+|||+||
T Consensus       502 llliLKw--GGelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL~lEgelT  579 (1018)
T KOG1057|consen  502 LLLILKW--GGELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELT  579 (1018)
T ss_pred             eeEEeee--CCEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHHhhccCCc
Confidence            9999999  999         99999999  5 47899999999999999999999999999999999999999999999


Q ss_pred             cceeeeEecCCCccCCCChhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002403          551 PILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQ  630 (927)
Q Consensus       551 Pilv~~V~kd~~lLD~~~~a~~~md~vK~kL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~l~~~~~~~  630 (927)
                      |||||||+||+.|||++++|++.|++||++||++|+.|.++     .++|+|+..   + |+|++++.+++++|+.++..
T Consensus       580 piLvqmVkkdn~LLD~~~~as~~m~~vK~~L~~ilq~~~~~-----~~e~~~~~~---~-P~~~~~l~~~ve~vk~~~k~  650 (1018)
T KOG1057|consen  580 PILVQMVKKDNTLLDDDNAASSYMDKVKARLHEILQAGREF-----TPEFDWPEL---M-PNPSEVLTQVVELVKNPVKV  650 (1018)
T ss_pred             HHHHHHHHhcchhhcCcchhHHHHHHHHHHHHHHHhcCCcC-----CCccchhhc---C-CcHhHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999999999999999999864     468899975   3 59999999999999999888


Q ss_pred             HHHhhhhhhhhhccCCCCCCCCChhhhhhcCCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHhhhcccCccccCCCCc
Q 002403          631 VRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPD  710 (927)
Q Consensus       631 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~c~gE~~~L~~eRW~KL~~dF~~~k~~kfD~SKIpd  710 (927)
                      +++.+..             ..++.        .++++.+|.+|+||+|+|+||++||+|||+|||+. +++||||||||
T Consensus       651 ~~e~~~~-------------~~~~~--------~i~v~~~~~r~~~~sE~~~Lm~~RW~Kl~rdf~~k-~~r~DiSKIpd  708 (1018)
T KOG1057|consen  651 CDENFAL-------------IEPLD--------HIDVERIQPRWPCHSETPDLMRERWEKLERDFYNK-RERFDISKIPD  708 (1018)
T ss_pred             HHHhhhc-------------ccccc--------ceeeecccCCCCcCCCCHHHHHHHHHHHHHHHhhh-ccccCccccch
Confidence            8864421             11222        47899999999999999999999999999999975 59999999999


Q ss_pred             chhhhhhhhccccccCcccHHHHHHHHHHhcceeccccccCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHHhHHhhhhc
Q 002403          711 VYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKS  790 (927)
Q Consensus       711 iYD~iKYD~LHNr~f~l~~l~ELY~lAK~LaD~V~PqEYGIt~~EKL~IG~~is~pLL~KI~~DL~~~~~~~~~~~~~~~  790 (927)
                      ||||||||+|||++|.++.+.|||.+||.|||+|+||||||+++|||+||+.+|.|||+||+.||+++++  +..++.++
T Consensus       709 iYD~~KYD~~HN~~l~~~~~~ely~~ak~lad~vip~eYgi~~~~kl~I~~~~~~~ll~Ki~~dL~~~~e--~~~~et~~  786 (1018)
T KOG1057|consen  709 IYDTIKYDLLHNRQLLLNGFDELYKYAKLLADIVIPQEYGINPQEKLKIGQGICTPLLGKILSDLVRTLE--LESAETKN  786 (1018)
T ss_pred             HHhhhhHHhhcchhhhhccccHHHHHHHhhcccccccccCCCHHHhhhhhhhhcchhhhhhhHhhhcchh--hcchhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999887  55667777


Q ss_pred             cccccccccccc--ccCCCCCCcccccccccccCCCcCCCCCCCCCCCccccccccCccccCCCCCccceeeEEEeecch
Q 002403          791 SQDQVSKSTKTE--KEDKDYPPKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSES  868 (927)
Q Consensus       791 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~e~~~rL~p~ya~V~SP~RhVRTRlYFTSES  868 (927)
                      +.++.+-+ +..  ..+-...+...+......+-+.    ++....+...++.+||.+.+....++.||++||+|||+||
T Consensus       787 ~~~p~~~s-p~~~~r~~lY~~sk~~v~sl~~~ryG~----~~~~~ln~~~~t~~~L~~~~~~d~~~e~~~~~rlyFtres  861 (1018)
T KOG1057|consen  787 RLNPVYLS-PRRHVRTRLYFTSKSHVHSLLLRRYGI----SDVEKLNDGLLTSIRLYEQILNDPTSERHFHTRLYFTRES  861 (1018)
T ss_pred             ccCccccC-hhHHHHHHHhhhhHhhhhhhhhhhcCC----chhhhhcccchhceeechhhccCCcccccceeEEEeccch
Confidence            66664211 000  0000111111222222222221    1222334467899999999999999999999999999999


Q ss_pred             hHHHHHHHHHhcCCccccccccchhhhhhhhhhcCCCCCcccccceEEEeecCCCCC
Q 002403          869 HIHSLMNVLRYCNLDESLQGEDSLVCHSALERLYKTKELDYMSYIVLRMFENTAVRI  925 (927)
Q Consensus       869 HIhSLLNvlr~~~l~~~~~~~~~~i~~~a~~~l~~i~ELdYLSqIvf~lyE~~~~~~  925 (927)
                      |||||+||+++|.++.+..|..+.++++|...++..+|||||+||||||||++.++.
T Consensus       862 hi~~l~nv~~~~~~dEs~~g~~~~~~~~~l~r~~~~~eld~~~~i~fel~e~t~~S~  918 (1018)
T KOG1057|consen  862 HIYTLMNVIRYCNLDESDRGLPMKICRNALPRLCDLKELDYLSQIVFELFENTEASG  918 (1018)
T ss_pred             hhhhhhhHhhhccccccccCCccccCcccCcccccchhhhhHHHHHHHHhccccccc
Confidence            999999999999999887788999999999999999999999999999999988764

>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK []	Back alignment and domain information

>PRK10446 ribosomal protein S6 modification protein; Provisional	Back alignment and domain information

>PLN02941 inositol-tetrakisphosphate 1-kinase	Back alignment and domain information

>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family	Back alignment and domain information

>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX	Back alignment and domain information

>PRK05246 glutathione synthetase; Provisional	Back alignment and domain information

>TIGR01380 glut_syn glutathione synthetase, prokaryotic	Back alignment and domain information

>PRK12458 glutathione synthetase; Provisional	Back alignment and domain information

>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle	Back alignment and domain information

>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein	Back alignment and domain information

>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103	Back alignment and domain information

>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed	Back alignment and domain information

>PRK14016 cyanophycin synthetase; Provisional	Back alignment and domain information

>TIGR02068 cya_phycin_syn cyanophycin synthetase	Back alignment and domain information

>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional	Back alignment and domain information

>PRK14571 D-alanyl-alanine synthetase A; Provisional	Back alignment and domain information

>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase	Back alignment and domain information

>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type	Back alignment and domain information

>PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6	Back alignment and domain information

>PRK14569 D-alanyl-alanine synthetase A; Provisional	Back alignment and domain information

>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed	Back alignment and domain information

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional	Back alignment and domain information

>PRK06849 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2	Back alignment and domain information

>PRK14570 D-alanyl-alanine synthetase A; Provisional	Back alignment and domain information

>PRK14572 D-alanyl-alanine synthetase A; Provisional	Back alignment and domain information

>PRK14568 vanB D-alanine--D-lactate ligase; Provisional	Back alignment and domain information

>PRK13790 phosphoribosylamine--glycine ligase; Provisional	Back alignment and domain information

>PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase	Back alignment and domain information

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein	Back alignment and domain information

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated	Back alignment and domain information

>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A	Back alignment and domain information

>PRK00885 phosphoribosylamine--glycine ligase; Provisional	Back alignment and domain information

>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction	Back alignment and domain information

>PRK07206 hypothetical protein; Provisional	Back alignment and domain information

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	Back alignment and domain information

>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed	Back alignment and domain information

>PRK05586 biotin carboxylase; Validated	Back alignment and domain information

>PRK08462 biotin carboxylase; Validated	Back alignment and domain information

>PRK02186 argininosuccinate lyase; Provisional	Back alignment and domain information

>PRK07178 pyruvate carboxylase subunit A; Validated	Back alignment and domain information

>PRK08463 acetyl-CoA carboxylase subunit A; Validated	Back alignment and domain information

>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit	Back alignment and domain information

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated	Back alignment and domain information

>TIGR00877 purD phosphoribosylamine--glycine ligase	Back alignment and domain information

>PRK08654 pyruvate carboxylase subunit A; Validated	Back alignment and domain information

>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]	Back alignment and domain information

>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated	Back alignment and domain information

>PRK06395 phosphoribosylamine--glycine ligase; Provisional	Back alignment and domain information

>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule []	Back alignment and domain information

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit	Back alignment and domain information

>TIGR01235 pyruv_carbox pyruvate carboxylase	Back alignment and domain information

>PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp	Back alignment and domain information

>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional	Back alignment and domain information

>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon	Back alignment and domain information

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed	Back alignment and domain information

>PLN02948 phosphoribosylaminoimidazole carboxylase	Back alignment and domain information

>PLN02257 phosphoribosylamine--glycine ligase	Back alignment and domain information

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional	Back alignment and domain information

>PRK12999 pyruvate carboxylase; Reviewed	Back alignment and domain information

>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6	Back alignment and domain information

>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed	Back alignment and domain information

>PLN02735 carbamoyl-phosphate synthase	Back alignment and domain information

>PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments)	Back alignment and domain information

>PLN02735 carbamoyl-phosphate synthase	Back alignment and domain information

>PRK06524 biotin carboxylase-like protein; Validated	Back alignment and domain information

>PRK13789 phosphoribosylamine--glycine ligase; Provisional	Back alignment and domain information

>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only]	Back alignment and domain information

>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit	Back alignment and domain information

>TIGR02712 urea_carbox urea carboxylase	Back alignment and domain information

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed	Back alignment and domain information

>PRK05784 phosphoribosylamine--glycine ligase; Provisional	Back alignment and domain information

>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp	Back alignment and domain information

>COG0439 AccC Biotin carboxylase [Lipid metabolism]	Back alignment and domain information

>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only]	Back alignment and domain information

>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional	Back alignment and domain information

>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below)	Back alignment and domain information

>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional	Back alignment and domain information

>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism]	Back alignment and domain information

>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis

Back alignment and domain information

>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6	Back alignment and domain information

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]	Back alignment and domain information

>PF14305 ATPgrasp_TupA: TupA-like ATPgrasp	Back alignment and domain information

>COG3919 Predicted ATP-grasp enzyme [General function prediction only]	Back alignment and domain information

>KOG3672 consensus Histidine acid phosphatase [General function prediction only]	Back alignment and domain information

>PF14243 DUF4343: Domain of unknown function (DUF4343)	Back alignment and domain information

>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]	Back alignment and domain information

>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		927
3t7a_A		330	Crystal Structure Of The Catalytic Domain Of Human		1e-107
3t54_A		334	Crystal Structure Of The Catalytic Domain Of Human		1e-107

>pdb|3T7A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Adp At Ph 5.2 Length = 330

Back alignment and structure

Iteration: 1

Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/326 (56%), Positives = 241/326 (73%), Gaps = 7/326 (2%) Query: 5 KKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFY 64 ++I +G+C M KK S PM +IL+R+ F V+ F ++VIL +P+E WP+CDCLI+F+ Sbjct: 6 RQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFH 65 Query: 65 SSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQ 124 S G+PL+KA +YA LR PF++N+L Q+L+ DRR+VY L+ GI +PRYA++NR+ Sbjct: 66 SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNP 125 Query: 125 ELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSE 184 + IE ED VEV+G F KPFVEKPV +DH++ IYYP+SAGGG + LFRK+G+RSS Sbjct: 126 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 185 Query: 185 FHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEV 244 + P+ VR+ GSYIYEEFMPT GTDVKVYTVGP+YAHAEARKSP +DG V R+ +GKEV Sbjct: 186 YSPE-SNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEV 244 Query: 245 RYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAAC 304 RYPV+L EK +A +VC+AF+Q VCGFDLLR G+SYVCDVNG+SFVKNS KYYDD A Sbjct: 245 RYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAK 304 Query: 305 VLRKMFLEAKAPHLSSAIPPILPWKV 330 +L + + AP +PW + Sbjct: 305 ILGNIVMRELAPQFH------IPWSI 324

PyMOL of 3t7a

>pdb|3T54|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Atp And Cadmium Length = 334

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		927
3t7a_A		330	Inositol pyrophosphate kinase; ATP-grAsp fold, tra	1e-177
1z2n_X		324	Inositol 1,3,4-trisphosphate 5/6-kinase; inositol	1e-29
2q7d_A		346	Inositol-tetrakisphosphate 1-kinase; inositol kina	1e-23
1uc8_A		280	LYSX, lysine biosynthesis enzyme; alpha-aminoadipa	1e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-10

>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 3t54_A* 3t99_A* Length = 330	Back alignment and structure

 Score =  516 bits (1330), Expect = e-177
 Identities = 185/328 (56%), Positives = 243/328 (74%), Gaps = 3/328 (0%)

Query: 5   KKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFY 64
           ++I +G+C M KK  S PM +IL+R+  F    V+ F ++VIL +P+E WP+CDCLI+F+
Sbjct: 6   RQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFH 65

Query: 65  SSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQ 124
           S G+PL+KA +YA LR PF++N+L  Q+L+ DRR+VY  L+  GI +PRYA++NR+    
Sbjct: 66  SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNP 125

Query: 125 ELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSE 184
           +    IE ED VEV+G  F KPFVEKPV  +DH++ IYYP+SAGGG + LFRK+G+RSS 
Sbjct: 126 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 185

Query: 185 FHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEV 244
           + P+   VR+ GSYIYEEFMPT GTDVKVYTVGP+YAHAEARKSP +DG V R+ +GKEV
Sbjct: 186 YSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEV 244

Query: 245 RYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAAC 304
           RYPV+L   EK +A +VC+AF+Q VCGFDLLR  G+SYVCDVNG+SFVKNS KYYDD A 
Sbjct: 245 RYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAK 304

Query: 305 VLRKMFLEAKAPHLSSAIPPILPWKVNE 332
           +L  + +   AP     IP  +P +  +
Sbjct: 305 ILGNIVMRELAPQFH--IPWSIPLEAED 330

PyMOL of 3t7a

>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Length = 324	Back alignment and structure

>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Length = 346	Back alignment and structure

>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		927
3t7a_A		330	Inositol pyrophosphate kinase; ATP-grAsp fold, tra	100.0
1i7n_A		309	Synapsin II; synapse, phosphorylation, neuropeptid	99.96
2p0a_A		344	Synapsin-3, synapsin III; neurotransmitter release	99.96
1pk8_A		422	RAT synapsin I; ATP binding, ATP grAsp, calcium (I	99.95
2q7d_A		346	Inositol-tetrakisphosphate 1-kinase; inositol kina	99.94
1z2n_X		324	Inositol 1,3,4-trisphosphate 5/6-kinase; inositol	99.85
1uc8_A		280	LYSX, lysine biosynthesis enzyme; alpha-aminoadipa	99.84
3ln6_A		750	Glutathione biosynthesis bifunctional protein GSH;	99.75
3ln7_A		757	Glutathione biosynthesis bifunctional protein GSH;	99.75
1gsa_A		316	Glutathione synthetase; ligase; HET: ADP GSH; 2.00	99.72
3r5x_A		307	D-alanine--D-alanine ligase; alpha-beta structure,	99.72
1iow_A		306	DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho	99.7
4eg0_A		317	D-alanine--D-alanine ligase; structural genomics,	99.61
2fb9_A		322	D-alanine:D-alanine ligase; 1.90A {Thermus caldoph	99.53
3se7_A		346	VANA; alpha-beta structure, D-alanine-D-lactate li	99.53
2pvp_A		367	D-alanine-D-alanine ligase; 2.40A {Helicobacter py	99.51
1e4e_A		343	Vancomycin/teicoplanin A-type resistance protein;	99.5
1ehi_A		377	LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g	99.5
2i87_A		364	D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco	99.48
3df7_A		305	Putative ATP-grAsp superfamily protein; putative p	99.44
3i12_A		364	D-alanine-D-alanine ligase A; D-alanyl-alanine syn	99.41
3e5n_A		386	D-alanine-D-alanine ligase A; bacterial blight; 2.	99.41
3k3p_A		383	D-alanine--D-alanine ligase; D-alanyl-alanine synt	99.4
3lwb_A		373	D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan	99.37
3tqt_A		372	D-alanine--D-alanine ligase; cell envelope; 1.88A	99.36
2pn1_A		331	Carbamoylphosphate synthase large subunit; ZP_0053	99.35
2ip4_A		417	PURD, phosphoribosylamine--glycine ligase; GAR syn	99.33
2dwc_A		433	PH0318, 433AA long hypothetical phosphoribosylglyc	99.33
1kjq_A		391	GART 2, phosphoribosylglycinamide formyltransferas	99.33
3ax6_A		380	Phosphoribosylaminoimidazole carboxylase, ATPase;	99.33
2z04_A		365	Phosphoribosylaminoimidazole carboxylase ATPase su	99.33
3aw8_A		369	PURK, phosphoribosylaminoimidazole carboxylase, AT	99.32
4fu0_A		357	D-alanine--D-alanine ligase 7; vancomycin resistan	99.29
4dim_A		403	Phosphoribosylglycinamide synthetase; structural g	99.29
1vkz_A		412	Phosphoribosylamine--glycine ligase; TM1250, struc	99.27
2yrx_A		451	Phosphoribosylglycinamide synthetase; glycinamide	99.26
2yw2_A		424	Phosphoribosylamine--glycine ligase; glycinamide r	99.26
2xcl_A		422	Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-	99.23
3vot_A		425	L-amino acid ligase, BL00235; ATP-grAsp motif, ATP	99.23
3q2o_A		389	Phosphoribosylaminoimidazole carboxylase, ATPase;	99.22
4ffl_A		363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	99.2
3lp8_A		442	Phosphoribosylamine-glycine ligase; ssgcid, NIH, n	99.2
2qk4_A		452	Trifunctional purine biosynthetic protein adenosi;	99.19
3k5i_A		403	Phosphoribosyl-aminoimidazole carboxylase; purine	99.17
3mjf_A		431	Phosphoribosylamine--glycine ligase; structural ge	99.17
4e4t_A		419	Phosphoribosylaminoimidazole carboxylase, ATPase;	99.16
3eth_A		355	Phosphoribosylaminoimidazole carboxylase ATPase su	99.16
2w70_A		449	Biotin carboxylase; ligase, ATP-binding, fatty aci	99.15
3orq_A		377	N5-carboxyaminoimidazole ribonucleotide synthetas;	99.15
3ouz_A		446	Biotin carboxylase; structural genomics, center fo	99.12
1ulz_A		451	Pyruvate carboxylase N-terminal domain; biotin car	99.12
2r85_A		334	PURP protein PF1517; ATP-grAsp superfamily, unknow	99.1
2vpq_A		451	Acetyl-COA carboxylase; bacteria, ATP-grAsp domain	99.08
2dzd_A		461	Pyruvate carboxylase; biotin carboxylase, ligase;	99.05
3n6r_A		681	Propionyl-COA carboxylase, alpha subunit; protein	99.03
3vmm_A		474	Alanine-anticapsin ligase BACD; ATP-grAsp domain,	98.98
3glk_A		540	Acetyl-COA carboxylase 2; ATP binding, alternative	98.95
3jrx_A		587	Acetyl-COA carboxylase 2; BC domain, soraphen A, a	98.93
1a9x_A		1073	Carbamoyl phosphate synthetase (large chain); amid	98.93
3u9t_A		675	MCC alpha, methylcrotonyl-COA carboxylase, alpha-s	98.91
2qf7_A		1165	Pyruvate carboxylase protein; multi-domain, multi-	98.89
1a9x_A		1073	Carbamoyl phosphate synthetase (large chain); amid	98.88
1w96_A		554	ACC, acetyl-coenzyme A carboxylase; ligase, obesit	98.83
3hbl_A		1150	Pyruvate carboxylase; TIM barrel, ligase; HET: BTI	98.83
3va7_A		1236	KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A	98.82
2pbz_A		320	Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt	98.41
2r7k_A		361	5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib	97.94
1nd6_A		354	Prostatic acid phosphatase; PAP, prostate, phospha	97.83
3it3_A		342	Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A	97.74
2cqy_A		108	Propionyl-COA carboxylase alpha chain, mitochondri	97.4
1wr2_A		238	Hypothetical protein PH1789; structural genomics,	97.08
1dkq_A		410	Phytase; histidine acid phosphatase fold, hydrolas	97.0
2io8_A		619	Bifunctional glutathionylspermidine synthetase/ami	94.05
2nu8_B		388	SCS-beta, succinyl-COA synthetase beta chain; citr	90.51
2gfi_A		458	Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces	90.07
3it3_A		342	Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A	89.76
1qfx_A		460	Protein (PH 2.5 acid phosphatase); phosphomonoeste	88.68
1qwo_A		442	Phytase; alpha barrel, beta sandwich, orthogonal b	87.96
3k4q_A		444	3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex	86.88
2wnh_A		418	3-phytase; histidine acid phosphatase, hydrolase;	86.8
1nd6_A		354	Prostatic acid phosphatase; PAP, prostate, phospha	86.23
2fp4_B		395	Succinyl-COA ligase [GDP-forming] beta-chain, mito	84.56
3ufx_B		397	Succinyl-COA synthetase beta subunit; ATP-grAsp fo	84.04
3ntl_A		398	Acid glucose-1-phosphate phosphatase; histidine ac	82.37
3ntl_A		398	Acid glucose-1-phosphate phosphatase; histidine ac	82.31
3tig_A		380	TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si	81.65
2wnh_A		418	3-phytase; histidine acid phosphatase, hydrolase;	80.96

>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*	Back alignment and structure

Probab=100.00  E-value=1.1e-120  Score=977.07  Aligned_cols=321  Identities=57%  Similarity=1.057  Sum_probs=310.1

Q ss_pred             CCeeEEEEeecCcccCChhHHHHHHHhhcCCceEEEEeCCceeecCCCcccCCcCeeeccccCCCchHHHHHHHHhcCCc
Q 002403            4 HKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPF   83 (927)
Q Consensus         4 ~~~~~iGVCam~~Ka~SkPm~~IL~rL~~~~~f~viiF~d~vIL~e~ve~wP~~D~lIsf~s~gfpl~kai~y~~lr~p~   83 (927)
                      .++++|||||||+||+|||||+||+||.++++||||||+|+|||++|||+||.|||||||||+||||+|||+|+++|+||
T Consensus         5 ~~~~~~gvcam~~k~~s~pm~~il~rl~~~~~f~~iif~d~~il~~~ve~wp~~d~lisf~s~gfpl~kai~y~~lr~p~   84 (330)
T 3t7a_A            5 ERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPF   84 (330)
T ss_dssp             -CCEEEEEESCHHHHTSHHHHHHHHHHTTSTTEEEEECCHHHHHHSCGGGSCCCSEEEECCCTTCCHHHHHHHHHHHCCE
T ss_pred             CCceEEEEEecccccccHHHHHHHHHhcccCcEEEEEeCCCceecCCcccCCcCCEEEEeccCCCcHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCchhhhHhhhHHHHHHHHHhCCCCCCCEEEEeccCCCccccccccccceeeecCeeccCcEEEeeccccCcceeEEe
Q 002403           84 LVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYY  163 (927)
Q Consensus        84 ~iNdl~~q~~l~DR~~~lqiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYy  163 (927)
                      +|||+.+|.++|||+++|++|+++|||||+|++++++++.+....+++.+|+|+++|++++||||+||++||||||||||
T Consensus        85 ~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iyy  164 (330)
T 3t7a_A           85 VINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYY  164 (330)
T ss_dssp             ESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSEEEEESBTTCCCCEEEC
T ss_pred             eeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccchhhhhccccccCCeeEcccccccCcceeec
Confidence            99999999999999999999999999999999999986444446789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhhcCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCc
Q 002403          164 PSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKE  243 (927)
Q Consensus       164 p~~~GgG~~rLfrki~n~sS~~~~~~~~~r~~gsyIyeEFi~~~G~DIKvytVG~~~vhAe~RkSPv~dG~vrrN~~gke  243 (927)
                      |++|||||+|||||+||+||+|+|++ .+|++++|||||||+++|+||||||||++|||||+|+||++||+||||+||||
T Consensus       165 p~s~GgG~~RLfrki~n~sS~~~~~~-~vr~~~~~i~QEFI~~~G~DIRv~vVG~~vv~Am~R~sp~~~G~~r~N~~gG~  243 (330)
T 3t7a_A          165 PTSAGGGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE  243 (330)
T ss_dssp             CGGGTCCEEEEEEEETTEEEEEESCC-SCCSSSCEEEEECCCCSSEEEEEEEESTTCEEEEEEECTTSSCBCCBCTTSCB
T ss_pred             ccccCCchhhhhhhhCCcccccChhh-hhccCCcEEEEeccCCCCceEEEEEECCEEEEEEEEeCCCCCCcEEEcCCCCc
Confidence            99999999999999999999999987 67999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeeCCHHHHHHHHHHHHHhCCceeEEEEEeeCCCcEEEecCCccccccchhhHHHHHHHHHHHHHHhhCCCCCCCCC
Q 002403          244 VRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIP  323 (927)
Q Consensus       244 ~r~~v~Lt~eEk~iA~k~~~afgq~VcGfDlLRs~~~syV~DVNGwSFVK~n~~YYd~cA~iL~~~~l~~~~~~~~~~~~  323 (927)
                      +|++|+||+||++||.|||+||||+||||||||++++|||||||||||||+|.+|||+||+||+.+||++++|+.     
T Consensus       244 ~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVNg~~fvk~~~~yyd~~a~il~~~~~~~~~~~~-----  318 (330)
T 3t7a_A          244 VRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQF-----  318 (330)
T ss_dssp             CCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEEESCCCSSCHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             eeeeecCCHHHHHHHHHHHHHhCCceEEEEEEEECCccEEEEeCCCccccCchhHHHHHHHHHHHHHHHHhCccc-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999997     


Q ss_pred             CCCCCCCC
Q 002403          324 PILPWKVN  331 (927)
Q Consensus       324 ~~~~~~~~  331 (927)
                       ++||+.+
T Consensus       319 -~~~~~~~  325 (330)
T 3t7a_A          319 -HIPWSIP  325 (330)
T ss_dssp             -TCCCCC-
T ss_pred             -CCcccCC
Confidence             5677653

PyMOL of 3t7a

>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*	Back alignment and structure

>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}	Back alignment and structure

>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*	Back alignment and structure

>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X	Back alignment and structure

>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*	Back alignment and structure

>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*	Back alignment and structure

>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}	Back alignment and structure

>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}	Back alignment and structure

>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A	Back alignment and structure

>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*	Back alignment and structure

>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*	Back alignment and structure

>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A	Back alignment and structure

>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*	Back alignment and structure

>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}	Back alignment and structure

>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}	Back alignment and structure

>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*	Back alignment and structure

>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1	Back alignment and structure

>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*	Back alignment and structure

>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}	Back alignment and structure

>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*	Back alignment and structure

>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*	Back alignment and structure

>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}	Back alignment and structure

>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}	Back alignment and structure

>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}	Back alignment and structure

>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}	Back alignment and structure

>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}	Back alignment and structure

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*	Back alignment and structure

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*	Back alignment and structure

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}	Back alignment and structure

>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}	Back alignment and structure

>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}	Back alignment and structure

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}	Back alignment and structure

>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2	Back alignment and structure

>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A	Back alignment and structure

>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A	Back alignment and structure

>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*	Back alignment and structure

>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}	Back alignment and structure

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*	Back alignment and structure

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*	Back alignment and structure

>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}	Back alignment and structure

>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}	Back alignment and structure

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*	Back alignment and structure

>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A	Back alignment and structure

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A	Back alignment and structure

>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*	Back alignment and structure

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...	Back alignment and structure

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A	Back alignment and structure

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*	Back alignment and structure

>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2	Back alignment and structure

>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*	Back alignment and structure

>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}	Back alignment and structure

>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}	Back alignment and structure

>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}	Back alignment and structure

>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}	Back alignment and structure

>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A	Back alignment and structure

>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*	Back alignment and structure

>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*	Back alignment and structure

>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*	Back alignment and structure

>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*	Back alignment and structure

>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A	Back alignment and structure

>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*	Back alignment and structure

>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}	Back alignment and structure

>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9	Back alignment and structure

>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*	Back alignment and structure

>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A	Back alignment and structure

>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A*	Back alignment and structure

>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}	Back alignment and structure

>1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A	Back alignment and structure

>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*	Back alignment and structure

>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*	Back alignment and structure

>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii}	Back alignment and structure

>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A*	Back alignment and structure

>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2	Back alignment and structure

>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A*	Back alignment and structure

>3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A	Back alignment and structure

>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A	Back alignment and structure

>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A	Back alignment and structure

>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*	Back alignment and structure

>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}	Back alignment and structure

>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A*	Back alignment and structure

>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A*	Back alignment and structure

>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*	Back alignment and structure

>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		927
d1i7na2		206	d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus nor	3e-07
d1uc8a2		192	d.142.1.7 (A:89-280) Lysine biosynthesis enzyme Ly	6e-06

>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 206	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Synapsin C-terminal domain
domain: Synapsin II
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.7 bits (117), Expect = 3e-07
 Identities = 32/231 (13%), Positives = 63/231 (27%), Gaps = 37/231 (16%)

Query: 86  NELEPQHLLHDRRKVYEQLEKY--GIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRF 143
           N LE  +   D+  V+ Q+      +   ++ L+ +       +                
Sbjct: 1   NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTL-----------P 49

Query: 144 WKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEF 203
             P V K  H             +G G  ++         +F      V    +Y   E 
Sbjct: 50  TFPVVVKIGHA-----------HSGMGKVKVENHY-----DFQDIASVVALTQTYATAEP 93

Query: 204 MPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCI 263
                 D++V  +G  Y            G    N     +    +    +  +     +
Sbjct: 94  FIDAKYDIRVQKIGNNYKAYMRTSIS---GNWKTNTGSAMLEQIAMSDRYKLWVDACSEM 150

Query: 264 AFRQAVCGFDLLRCE-GRSYVCDVNGWSFVKNSYKYYDD----AACVLRKM 309
                +C    +  + G+ Y+ +V   S         +D       V+ KM
Sbjct: 151 FGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKM 201

PyMOL of d1i7na2

>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Length = 192	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		927
d1uc8a2		192	Lysine biosynthesis enzyme LysX ATP-binding domain	99.76
d1i7na2		206	Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116	99.73
d1gsaa2		192	Prokaryotic glutathione synthetase, C-domain {Esch	99.69
d1e4ea2		211	D-alanine:D-lactate ligase VanA, C-domain {Enteroc	99.18
d1ehia2		228	D-alanine:D-lactate ligase VanA, C-domain {Leucono	99.14
d1nd6a_		342	Prostatic acid phosphatase {Human (Homo sapiens) [	99.13
d1iowa2		210	D-ala-D-ala ligase, C-domain {Escherichia coli, ge	99.08
d1vkza3		220	Glycinamide ribonucleotide synthetase (GAR-syn), d	98.78
d1nt4a_		391	Glucose-1-phosphatase {Escherichia coli [TaxId: 56	98.7
d3etja3		198	N5-carboxyaminoimidazole ribonucleotide synthetase	98.62
d2r85a2		235	5-formaminoimidazole-4-carboxamide ribonucleotide	98.48
d1dkla_		409	Phytase (myo-inositol-hexakisphosphate-3-phosphohy	98.4
d1a9xa5		275	Carbamoyl phosphate synthetase (CPS), large subuni	98.37
d1kjqa3		206	Glycinamide ribonucleotide transformylase PurT, do	98.36
d1ulza3		214	Biotin carboxylase (BC), domain 2 {Aquifex aeolicu	98.36
d1a9xa6		259	Carbamoyl phosphate synthetase (CPS), large subuni	98.31
d1gsoa3		224	Glycinamide ribonucleotide synthetase (GAR-syn), d	98.29
d1qfxa_		447	Phytase (myo-inositol-hexakisphosphate-3-phosphohy	98.21
d2r7ka2		238	5-formaminoimidazole-4-carboxamide ribonucleotide	98.2
d2j9ga3		216	Biotin carboxylase (BC), domain 2 {Escherichia col	98.13
d1w96a3		267	Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye	97.66
d1ihpa_		438	Phytase (myo-inositol-hexakisphosphate-3-phosphohy	97.36
d1qwoa_		435	Phytase (myo-inositol-hexakisphosphate-3-phosphohy	97.32
d1uc8a1		88	Lysine biosynthesis enzyme LysX, N-terminal domain	94.77

>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Lysine biosynthesis enzyme LysX ATP-binding domain
domain: Lysine biosynthesis enzyme LysX ATP-binding domain
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=1.6e-18  Score=166.29  Aligned_cols=165  Identities=22%  Similarity=0.264  Sum_probs=114.8

Q ss_pred             HHHHHHHHHhCCCCCCCEEEEeccCCCccccccccccceeeecCeeccCcEEEeeccccCcceeEEeccCCCChHHHHHh
Q 002403           97 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR  176 (927)
Q Consensus        97 R~~~lqiL~~~gIp~P~t~~~~r~~p~~~~~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfr  176 (927)
                      |+++++.|+++|||+|+|++++..         .+..+.+    ..+++|+|+||..|.           .|.|+.....
T Consensus         1 K~~~~~~l~~~GipvP~t~~~~~~---------~~~~~~~----~~~g~P~ivKP~~g~-----------~g~gv~~~~~   56 (192)
T d1uc8a2           1 KWATSVALAKAGLPQPKTALATDR---------EEALRLM----EAFGYPVVLKPVIGS-----------WGRLLAXXXX   56 (192)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEESSH---------HHHHHHH----HHHCSSEEEECSBCC-----------BCSHHHHHHH
T ss_pred             CHHHHHHHHHcCcCCCCEEEECCH---------HHHHHHH----HHhCCCEEEECCcCC-----------cccceeeccc
Confidence            678999999999999999998751         0122222    235689999999997           6777642222


Q ss_pred             hcCCCcccccc-cccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCCHHHH
Q 002403          177 KVGNRSSEFHP-DVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEK  255 (927)
Q Consensus       177 ki~n~sS~~~~-~~~~~r~~gsyIyeEFi~~~G~DIKvytVG~~~vhAe~RkSPv~dG~vrrN~~gke~r~~v~Lt~eEk  255 (927)
                      .-. ....... +......+..+|+||||+....|++|+++|++++++..|+.+    .+..+........+..+.++..
T Consensus        57 ~~~-~~~~~~~~~~~~~~~~~~~lvqefi~g~~~~~~v~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  131 (192)
T d1uc8a2          57 XXX-XXXXXXXKEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRSA----HWITNTARGGQAENCPLTEEVA  131 (192)
T ss_dssp             HHC-------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHHH
T ss_pred             ccc-chhhHHHHHHHhccCCCCEEEEEecCCCCeeEEEEEECCEEEeEEEeeec----ccccccccccccccccchhhhh
Confidence            221 1111111 111223566799999999877899999999999999998764    4555666667777889999999


Q ss_pred             HHHHHHHHHhCCceeEEEEEeeCCCcEEEecCCcc
Q 002403          256 QMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWS  290 (927)
Q Consensus       256 ~iA~k~~~afgq~VcGfDlLRs~~~syV~DVNGwS  290 (927)
                      .++.+++++++..+||||++.+++++||+|||.-.
T Consensus       132 ~~~~~~~~~~~~g~~~vD~~~~~~~~~vlEiN~r~  166 (192)
T d1uc8a2         132 RLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHTM  166 (192)
T ss_dssp             HHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETTC
T ss_pred             hhhhhHHHhhhccccceEEEecCCCEEEEEEcCCC
Confidence            99999999999999999999999999999999654

PyMOL of d1uc8a2

>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}	Back information, alignment and structure

>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}	Back information, alignment and structure

>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]}	Back information, alignment and structure

>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]}	Back information, alignment and structure

>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}	Back information, alignment and structure

>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]}	Back information, alignment and structure

>d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]}	Back information, alignment and structure

>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure