Citrus Sinensis ID: 002447

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-
MESQHANNGNDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLSS
cccccccccccccccEEEccccccccccccccEEEccccccccccEEEccccEEEEEccccccccccccccccEEEEEcccccccccEEEcccccccccEEEEEEEEEEccccccccEEEEEEEEEEcccccEEEEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEccccccEEEEEEEEEEEccccccccccccccccccccEEEccccccccccEEEEEcEEEEEEcccccccccccccEEEEEEcccccccccEEEEccccccccEEEEEEEEEEEccccEEEEEEEEEEEEcccccccEEEEEEEEEcccccEEEEEEEEEcccccEEEEEEEcccccccEEEEEEEEEcccccccccccccccccccEEEEEcccccccccccEEccccEEEEEccccccccccccccccccccccccEEEEEEccccccccccHHHHHcccccEEEEEEEEEEcccccccEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEEcccccEEEEEEccccccEEEEEEEEEccccHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHcccccccEEEEEcccccccHHHHHHHHHHccEEEccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEEcccccccHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccHHccccHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHcccccEEcccccEEEEEEEEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEcc
ccccccccccccHHHHHcccccccccccccccEEEcccccccccccccccccEEEEEEccccccccccccccEEEEEEccccccccccEEcccccccccEEEEEEEEEEccccccccEEEEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEEcccccEEEEEEEccccccEEEEEEEEEEcccccccccccccccccccccEEEcccccccccccccccccEEEEEEEcccccccccccEEEEEEccccccccccEEccHccccccEEEEEEEEEEcccccccEEEEEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEEccccccEEEEEEccccccEEEEEEEEEEcccccccccccccccccccccEEEccccccccccccccccEEEEEEcccccccccccEEccccccccccEEEEEEccccccccccHHHHHHcccccEEEEEEEEEEcccccccEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEccccccEEEEEEcccccEEEEEEcEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccEEEEHcccccccEEEccHHHcccHHHHHHHHHHccEEEEcccccccccccccccccccHHHHHHHHHHHcccEEEEEEEEEccccccccHcccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEcHHHcccHHHHHHccHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccEEEccccccccHHHHHHHHHHHHHcccccccccccEEEEEEEccEEEEEEEccccEEEEEEEEccccccEEEEEEEcc
mesqhanngndnSAALIAEHnkinlststaanlivnndfsmglhswhpncchAFIAsaeshypegtsansvgnhavVTNRKECWQGLeqditdkvspgfTYLVSAsvgvsgphqgsaDVLATLKLeqrdsetsyLFIGktsvskdnwenlegtfslsavpdrivfylegpapgvdLLIRSVVItcsspsecenksigcniagdeniilnpkfedglnnwsgrgckivlhdsmadgkivplsgkvfASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWvqtpnqrdQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIymegpppgadILVNSLVVKhaekippspppvienpafgvniitnselsdgtngwfplgnctlsigtgsphilppmardslgpheplsghYILVTNrtqtwmgpaQMITEKLKLFLTYQVAAWVrigsgatgpqnvnialgvdnqwvnggqveinddrwheiggsfriekqpskVMVYIQGPASGIDVMVAGlqifpvdreARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVkqtqnsfpigscinrsqidneDFVKFFTKYFNWAVFGNELKWYWTEsqqgnfnykdadDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYkgkfrhydvnnemlhgsfyqdkLGKDIRAYMFKTAHQLDLSATlfvndyhvedgcdprsspeKYIEHILNLQeqgapvggigiqghidspvgpivcsaldnlgilglpiwfteldvssineyvrgeDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQghvdeqgefafrgfhgtyTIVIPTLHKKIVKTFvvdkgesplvvtidlss
mesqhanngnDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIgktsvskdnwenLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATertqswngiqQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSfriekqpskVMVYIQGPASGIDVMVAGLQifpvdrearfrhlrrqtdkirkrdvvlklsGLDCSSMLGTFVKVKQTQNsfpigscinrsqIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKtfvvdkgesplvvtidlss
MESQHANNGNDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIppspppVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLSS
****************IAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYP*****NSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSG*****ADVLATLKLE****ETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVK****************AFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHIL************PLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDP****EKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTI****
****************************TAANLIVNNDFSMGLHSWHPNCCHAFIASAES**********VGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSM*******LSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAE************PAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILP**************GHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHL*R*TDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLS*
*********NDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLSS
******************EHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLS*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESQHANNGNDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHxxxxxxxxxxxxxxxxxxxxxWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKIVKTFVVDKGESPLVVTIDLSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query921 2.2.26 [Sep-21-2011]
P36917 1157 Endo-1,4-beta-xylanase A no no 0.579 0.461 0.243 6e-38
P38535 1087 Exoglucanase XynX OS=Clos no no 0.431 0.365 0.251 2e-29
O69230 1086 Endo-1,4-beta-xylanase C N/A no 0.626 0.531 0.227 9e-29
P10478837 Endo-1,4-beta-xylanase Z no no 0.274 0.302 0.260 2e-25
P23360329 Endo-1,4-beta-xylanase OS N/A no 0.230 0.644 0.327 6e-25
Q0H904325 Endo-1,4-beta-xylanase C yes no 0.232 0.658 0.291 1e-23
A1CX14314 Probable endo-1,4-beta-xy N/A no 0.222 0.652 0.292 1e-23
Q96VB6323 Endo-1,4-beta-xylanase F3 yes no 0.261 0.746 0.287 5e-23
Q00177327 Endo-1,4-beta-xylanase C yes no 0.261 0.737 0.281 5e-23
P26514477 Endo-1,4-beta-xylanase A N/A no 0.268 0.517 0.285 2e-22
>sp|P36917|XYNA_THESA Endo-1,4-beta-xylanase A OS=Thermoanaerobacter saccharolyticum GN=xynA PE=1 SV=1 Back     alignment and function desciption
 Score =  160 bits (404), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 271/629 (43%), Gaps = 95/629 (15%)

Query: 205 NIILNPKFEDG-LNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGIQQEIT 263
           N++ N  FE G ++ W  +G   +      +  I   S KV    T RTQ++ G      
Sbjct: 39  NLVSNGDFESGTIDGWIKQGNPTLA--VTTEQAIGQYSMKV----TGRTQTYEGPAYSFL 92

Query: 264 GRVQRKLAYDVTAVVRIF-GNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDWAQLH 322
           G++Q+  +Y V+  VR+  G N +   +  T++ +  N +    ++   Q ++  W  + 
Sbjct: 93  GKMQKGESYSVSLKVRLVSGQNSSNPLITVTMFREDDNGKHYDTIVWQKQVSEDSWTTVS 152

Query: 323 GKFLLN--GSPARVVIYMEGPPPGADILVNSLVVKHAEKIPPSPPPVIENPAFGVNIITN 380
           G + L+  G+   + +Y+E P P  +  ++ +VV              +NP    N+I N
Sbjct: 153 GTYTLDYIGTLKTLYMYVESPDPTLEYYIDDVVV------------TTQNPIQVGNVIAN 200

Query: 381 SELSDG-TNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHY-ILVTNRTQTWMG 438
               +G T+GW   G+  +    G  H                SG Y +L T RT  W G
Sbjct: 201 ETFENGNTSGWIGTGSSVVKAVYGVAH----------------SGDYSLLTTGRTANWNG 244

Query: 439 PAQMITEKLKLFLTYQVAAWVRIGSGATGPQ---NVNIALGVDNQWVNGGQVEINDDRWH 495
           P+  +T K+     Y V  WV+  +G    Q    V      DN         +N   W 
Sbjct: 245 PSYDLTGKIVPGQQYNVDFWVKFVNGNDTEQIKATVKATSDKDNYIQVNDFANVNKGEWT 304

Query: 496 EIGGSFRIE-KQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDV 554
           EI GSF +     S + +Y++     ++  +    +                 +I    +
Sbjct: 305 EIKGSFTLPVADYSGISIYVESQNPTLEFYIDDFSVIG---------------EISNNQI 349

Query: 555 VLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNED-FVKFFTKYFNWAVFGNEL 613
            ++    D  S+   +         FPIG  ++ S++++ D   +   K+FN  V  N +
Sbjct: 350 TIQNDIPDLYSVFKDY---------FPIGVAVDPSRLNDADPHAQLTAKHFNMLVAENAM 400

Query: 614 KWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWI--------QSLN 665
           K    +  +GNF + +AD ++D  + HN++ RGH + W  Q  V  W         +S +
Sbjct: 401 KPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQ--VPDWFFQDPSDPSKSAS 458

Query: 666 KNDLMTAVQNRLTGLLARYKGKFRH------YDVNNEML--HGSFYQDK----LGKDIRA 713
           ++ L+  ++  +T +L  +K K+        +DV NE+L  +G+    K    +G D   
Sbjct: 459 RDLLLQRLKTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDNGNLRNSKWLQIIGPDYIE 518

Query: 714 YMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDS 773
             F+ AH+ D S  LF+NDY++E+        +   + +  L+ +G P+ GIG+Q HI+ 
Sbjct: 519 KAFEYAHEADPSMKLFINDYNIENNG---VKTQAMYDLVKKLKSEGVPIDGIGMQMHINI 575

Query: 774 PVGPIVCSA-LDNLGILGLPIWFTELDVS 801
                   A ++ L  LG+ I  TELD++
Sbjct: 576 NSNIDNIKASIEKLASLGVEIQVTELDMN 604
Endo-acting enzyme that randomly cleaves the internal xylosidic linkages of the xylan backbone, yielding xylooligosaccharides of various lengths which are further hydrolyzed to xylose molecules by beta-xylosidase (EC 3.2.1.37). Requires at least three xylose residues for catalytic activity. Does not have activity against xylobiose.
Thermoanaerobacter saccharolyticum (taxid: 28896)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 8
>sp|P38535|XYNX_CLOTM Exoglucanase XynX OS=Clostridium thermocellum GN=xynX PE=3 SV=1 Back     alignment and function description
>sp|O69230|XYNC_PAEBA Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis GN=xynC PE=1 SV=1 Back     alignment and function description
>sp|P10478|XYNZ_CLOTH Endo-1,4-beta-xylanase Z OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=xynZ PE=1 SV=3 Back     alignment and function description
>sp|P23360|XYNA_THEAU Endo-1,4-beta-xylanase OS=Thermoascus aurantiacus GN=XYNA PE=1 SV=4 Back     alignment and function description
>sp|Q0H904|XYNC_ASPFU Endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnC PE=2 SV=2 Back     alignment and function description
>sp|A1CX14|XYNC_NEOFI Probable endo-1,4-beta-xylanase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnC PE=2 SV=1 Back     alignment and function description
>sp|Q96VB6|XYNF3_ASPOR Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xynF3 PE=1 SV=1 Back     alignment and function description
>sp|Q00177|XYNC_EMENI Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xlnC PE=1 SV=1 Back     alignment and function description
>sp|P26514|XYNA_STRLI Endo-1,4-beta-xylanase A OS=Streptomyces lividans GN=xlnA PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query921
60656567915 putative endo-1,4-beta-xylanase [Populus 0.993 1.0 0.789 0.0
224063411 1049 predicted protein [Populus trichocarpa] 0.980 0.860 0.797 0.0
225458944981 PREDICTED: endo-1,4-beta-xylanase A-like 0.968 0.909 0.785 0.0
356562213902 PREDICTED: endo-1,4-beta-xylanase A-like 0.969 0.990 0.768 0.0
356554054930 PREDICTED: endo-1,4-beta-xylanase A-like 0.969 0.960 0.767 0.0
449491693905 PREDICTED: endo-1,4-beta-xylanase A-like 0.972 0.990 0.746 0.0
449457375913 PREDICTED: endo-1,4-beta-xylanase A-like 0.972 0.981 0.746 0.0
73624751918 putative xylanase Xyn2 [Nicotiana tabacu 0.996 1.0 0.715 0.0
302142139911 unnamed protein product [Vitis vinifera] 0.957 0.968 0.734 0.0
73624749918 putative xylanase Xyn1 [Nicotiana tabacu 0.996 1.0 0.713 0.0
>gi|60656567|gb|AAX33301.1| putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
 Score = 1521 bits (3938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/919 (78%), Positives = 809/919 (88%), Gaps = 4/919 (0%)

Query: 1   MESQHANNGNDNSAALIAEHNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAES 60
           ME+Q  NNGND+S  +    N I+ S S A N+I+N+DFS GL+SWHPNCC  F+ SA+S
Sbjct: 1   METQQNNNGNDHSETV--SQNMIDSSNSNAPNIILNHDFSRGLNSWHPNCCDGFVLSADS 58

Query: 61  HYPEGTSANSVGNHAVVTNRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVL 120
            +  G S    GN+AVV+NRKECWQGLEQDIT ++SP  TY +SA VGVSGP Q   DVL
Sbjct: 59  GH-SGFSTKPGGNYAVVSNRKECWQGLEQDITSRISPCSTYSISARVGVSGPVQYPTDVL 117

Query: 121 ATLKLEQRDSETSYLFIGKTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRS 180
           ATLKLE ++S TSYL +G+ SVSK+ WE LEGTFSL+ +PD +VFYLEGPAPGVDLLI S
Sbjct: 118 ATLKLEYQNSATSYLLVGEISVSKEGWEKLEGTFSLATMPDHVVFYLEGPAPGVDLLIES 177

Query: 181 VVITCSSPSECENKSIGCNIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPL 240
           V+ITCS PSEC N    C   GD NIILNP+F+DGLNNWSGRGCKI +HDS+ADGKIVPL
Sbjct: 178 VIITCSCPSECNNAR-PCAGDGDGNIILNPQFDDGLNNWSGRGCKIAIHDSIADGKIVPL 236

Query: 241 SGKVFASATERTQSWNGIQQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPN 300
           SGKV A+ATERTQSWNGIQQEIT RVQRKLAY+ TAVVRIFGNNVT+A ++ATLWVQTPN
Sbjct: 237 SGKVLATATERTQSWNGIQQEITERVQRKLAYEATAVVRIFGNNVTSADIRATLWVQTPN 296

Query: 301 QRDQYIVIANVQATDKDWAQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKI 360
            R+QYI IAN+QATDKDW QL GKFLLNGSP RVVIY+EGPP G DILVNS VVKHAEKI
Sbjct: 297 LREQYIGIANLQATDKDWVQLQGKFLLNGSPKRVVIYIEGPPAGTDILVNSFVVKHAEKI 356

Query: 361 PPSPPPVIENPAFGVNIITNSELSDGTNGWFPLGNCTLSIGTGSPHILPPMARDSLGPHE 420
           PPSPPPVIENPAFGVNII NS LSDGTNGWFPLGNCTL++ TGSPHILPPMARDSLGPHE
Sbjct: 357 PPSPPPVIENPAFGVNIIQNSNLSDGTNGWFPLGNCTLTVATGSPHILPPMARDSLGPHE 416

Query: 421 PLSGHYILVTNRTQTWMGPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQ 480
           PLSG  ILVT RTQTWMGPAQMIT+KLKL LTYQV+AWV+IGSGA GPQNVN+ALGVDNQ
Sbjct: 417 PLSGRCILVTKRTQTWMGPAQMITDKLKLLLTYQVSAWVKIGSGANGPQNVNVALGVDNQ 476

Query: 481 WVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFR 540
           WVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVY+QGPA+G+D+M+AGLQIFPVDRE+RF+
Sbjct: 477 WVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYVQGPAAGVDLMLAGLQIFPVDRESRFK 536

Query: 541 HLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFF 600
           HLRRQTDKIRKRDV LK SG   SS+LGTF+KVKQTQNSFP GSC++R  +DNEDFV FF
Sbjct: 537 HLRRQTDKIRKRDVTLKFSGGGSSSVLGTFIKVKQTQNSFPFGSCMSRMNLDNEDFVNFF 596

Query: 601 TKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPW 660
            K FNWAVFGNELKWYWTE+QQGNFNY DAD+MLDLC  +NI+ RGHCIFWEV  TVQ W
Sbjct: 597 VKNFNWAVFGNELKWYWTEAQQGNFNYSDADEMLDLCKKNNIEARGHCIFWEVDGTVQQW 656

Query: 661 IQSLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAH 720
           I++LNKND+MTAVQNRLTGLL RYKGKF HYDVNNEMLHGSFYQD LGKDIRA MFKTA+
Sbjct: 657 IKALNKNDMMTAVQNRLTGLLTRYKGKFSHYDVNNEMLHGSFYQDHLGKDIRANMFKTAN 716

Query: 721 QLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVC 780
           QLD SA LFVNDYHVEDGCD RSSPEKYIE IL+LQEQGAPVGGIGIQGHIDSPVGP+VC
Sbjct: 717 QLDPSALLFVNDYHVEDGCDTRSSPEKYIEQILDLQEQGAPVGGIGIQGHIDSPVGPVVC 776

Query: 781 SALDNLGILGLPIWFTELDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSR 840
           SALD LGILGLPIWFTELDVSS+NE VRG+DLEVMLREA+AHPAV+G+MLWGFWELFMSR
Sbjct: 777 SALDKLGILGLPIWFTELDVSSVNECVRGDDLEVMLREAYAHPAVDGVMLWGFWELFMSR 836

Query: 841 DSAHLVNAEGDINEAGKKFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTIVIPTLHKKI 900
           D+AH VNAEG++NEAGK++L LK+EWLS A GH+DEQG+FAFRGFHGTY + I T+ KK+
Sbjct: 837 DNAHPVNAEGELNEAGKRYLALKKEWLSRAHGHIDEQGQFAFRGFHGTYVLEIETVSKKM 896

Query: 901 VKTFVVDKGESPLVVTIDL 919
           VKTFVVDKG+SPLVV+IDL
Sbjct: 897 VKTFVVDKGDSPLVVSIDL 915

Source: Populus tremula x Populus tremuloides

Species: Populus tremula x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224063411|ref|XP_002301133.1| predicted protein [Populus trichocarpa] gi|222842859|gb|EEE80406.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225458944|ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356562213|ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max] Back     alignment and taxonomy information
>gi|356554054|ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max] Back     alignment and taxonomy information
>gi|449491693|ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457375|ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|73624751|gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|302142139|emb|CBI19342.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|73624749|gb|AAZ79232.1| putative xylanase Xyn1 [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query921
TAIR|locus:2016595917 RXF12 [Arabidopsis thaliana (t 0.971 0.976 0.722 0.0
TAIR|locus:22019111063 AT1G10050 [Arabidopsis thalian 0.954 0.826 0.625 3.2e-310
TAIR|locus:2128833752 AT4G08160 [Arabidopsis thalian 0.779 0.954 0.711 2e-292
TAIR|locus:2121174562 AT4G38650 [Arabidopsis thalian 0.486 0.797 0.348 5.8e-66
TAIR|locus:2118884576 AT4G33830 [Arabidopsis thalian 0.516 0.826 0.292 6.2e-62
TAIR|locus:2118914576 AT4G33860 [Arabidopsis thalian 0.495 0.791 0.293 2.2e-57
TAIR|locus:2118894576 AT4G33840 [Arabidopsis thalian 0.509 0.814 0.285 2.3e-57
TAIR|locus:2118879570 AT4G33820 [Arabidopsis thalian 0.440 0.712 0.304 6.3e-50
TAIR|locus:2121788277 AT4G38300 [Arabidopsis thalian 0.263 0.877 0.419 6.5e-49
TAIR|locus:2064241570 AT2G14690 [Arabidopsis thalian 0.452 0.731 0.296 8.5e-46
TAIR|locus:2016595 RXF12 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3524 (1245.6 bits), Expect = 0., P = 0.
 Identities = 652/903 (72%), Positives = 753/903 (83%)

Query:    20 HNKINLSTSTAANLIVNNDFSMGLHSWHPNCCHAFIASAESHYPEGT-SANSVGNHAVVT 78
             +N  ++  S   N+IVN+DFS G+HSWHPNCC AF+ +AES+   G    +  G++ VV 
Sbjct:    17 NNVASIIGSDRTNVIVNHDFSSGMHSWHPNCCEAFVVTAESNVSHGVLDPSKCGSYVVVK 76

Query:    79 NRKECWQGLEQDITDKVSPGFTYLVSASVGVSGPHQGSADVLATLKLEQRDSETSYLFIG 138
             NRKE WQGLEQDIT++V P   Y VSA+V VSGP  G  +V+ATLKLE + S+T+Y FI 
Sbjct:    77 NRKETWQGLEQDITNRVKPCSLYKVSATVAVSGPVHGLVEVMATLKLESQQSQTNYQFIA 136

Query:   139 KTSVSKDNWENLEGTFSLSAVPDRIVFYLEGPAPGVDLLIRSVVITCSSPSECENKSIGC 198
             KT V K+ W  LEG FSL ++P+++VFYLEGP+PG+DLLI+SV I   S  E E  +   
Sbjct:   137 KTCVFKEKWVRLEGMFSLPSLPEKVVFYLEGPSPGIDLLIQSVTIHRESEPELERVT--- 193

Query:   199 NIAGDENIILNPKFEDGLNNWSGRGCKIVLHDSMADGKIVPLSGKVFASATERTQSWNGI 258
               A DE I++NP FEDGLNNWSGR CKIVLHDSMADGKIVP SGKVFASATERTQ+WNGI
Sbjct:   194 --AEDETIVVNPNFEDGLNNWSGRSCKIVLHDSMADGKIVPESGKVFASATERTQNWNGI 251

Query:   259 QQEITGRVQRKLAYDVTAVVRIFGNNVTTATVQATLWVQTPNQRDQYIVIANVQATDKDW 318
             QQEITG+VQRK  Y+ TAVVRI+GNNVTTATVQATLWVQ PNQRDQYI I+ VQATDK+W
Sbjct:   252 QQEITGKVQRKRVYEATAVVRIYGNNVTTATVQATLWVQNPNQRDQYIGISTVQATDKEW 311

Query:   319 AQLHGKFLLNGSPARVVIYMEGPPPGADILVNSLVVKHAEKIXXXXXXVIENPAFGVNII 378
               L GKFLLNGS +RVVIY+EGPPPG DIL+NSL VKHAEKI       IENPAFGVNI+
Sbjct:   312 IHLKGKFLLNGSASRVVIYIEGPPPGTDILLNSLTVKHAEKIPPSPPPSIENPAFGVNIL 371

Query:   379 TNSELSDGT-NGWFPLGNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWM 437
             TNS LSD T NGWF LGNCTLS+  GSP ILPPMARDSLG HE LSG YILVTNRTQTWM
Sbjct:   372 TNSHLSDDTTNGWFSLGNCTLSVAEGSPRILPPMARDSLGAHERLSGRYILVTNRTQTWM 431

Query:   438 GPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGVDNQWVNGGQVEINDDRWHEI 497
             GPAQMIT+KLKLFLTYQ++ WV++GSG   PQNVN+ALG+D+QWVNGGQVEINDDRWHEI
Sbjct:   432 GPAQMITDKLKLFLTYQISVWVKVGSGINSPQNVNVALGIDSQWVNGGQVEINDDRWHEI 491

Query:   498 GGSFRIEKQPSKVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLK 557
             GGSFRIEK PSK +VY+QGP+SGID+MVAGLQIFPVDR AR +HL+RQ DKIRKRDV+LK
Sbjct:   492 GGSFRIEKNPSKALVYVQGPSSGIDLMVAGLQIFPVDRLARIKHLKRQCDKIRKRDVILK 551

Query:   558 LSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYW 617
              +G+D S   G  V+V+Q +NSFP+G+CI+RS IDNEDFV FF K FNWAVF NELKWYW
Sbjct:   552 FAGVDSSKFSGASVRVRQIRNSFPVGTCISRSNIDNEDFVDFFLKNFNWAVFANELKWYW 611

Query:   618 TESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSLNKNDLMTAVQNRL 677
             TE +QG  NY+DADDML+LC ++NI+TRGHCIFWEVQATVQ WIQ++N+ DL  AVQNRL
Sbjct:   612 TEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQATVQQWIQNMNQTDLNNAVQNRL 671

Query:   678 TGLLARYKGKFRHYDVNNEMLHGSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVED 737
             T LL RYKGKF+HYDVNNEMLHGSFYQDKLGKDIR  MFKTAHQLD SATLFVNDYH+ED
Sbjct:   672 TDLLNRYKGKFKHYDVNNEMLHGSFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIED 731

Query:   738 GCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLPIWFTE 797
             GCDP+S PEKY E IL+LQE+GAPVGGIGIQGHIDSPVGPIVCSALD LGILGLPIWFTE
Sbjct:   732 GCDPKSCPEKYTEQILDLQEKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTE 791

Query:   798 LDVSSINEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAHLVNAEGDINEAGK 857
             LDVSS+NE++R +DLEVM+ EAF HPAVEGIMLWGFWELFMSRD++HLVNAEGD+NEAGK
Sbjct:   792 LDVSSVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGK 851

Query:   858 KFLNLKQEWLSHAQGHVDEQGEFAFRGFHGTYTI-VIPTLHKKIVKTFVVDKGESPLVVT 916
             +FL +K++WLSHA GH+D+ G F FRG+ G Y + VI T   K++KTF VDK +S  V+T
Sbjct:   852 RFLAVKKDWLSHANGHIDQNGAFPFRGYSGNYAVEVITTSSSKVLKTFGVDKEDSSQVIT 911

Query:   917 IDL 919
             +DL
Sbjct:   912 VDL 914
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0031176 "endo-1,4-beta-xylanase activity" evidence=IDA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2201911 AT1G10050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128833 AT4G08160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121174 AT4G38650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118884 AT4G33830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118914 AT4G33860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118894 AT4G33840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118879 AT4G33820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121788 AT4G38300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064241 AT2G14690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.8LOW CONFIDENCE prediction!
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query921
pfam00331308 pfam00331, Glyco_hydro_10, Glycosyl hydrolase fami 1e-79
smart00633263 smart00633, Glyco_10, Glycosyl hydrolase family 10 3e-77
COG3693345 COG3693, XynA, Beta-1,4-xylanase [Carbohydrate tra 1e-32
pfam02018134 pfam02018, CBM_4_9, Carbohydrate binding domain 1e-18
pfam02018134 pfam02018, CBM_4_9, Carbohydrate binding domain 1e-14
pfam02018134 pfam02018, CBM_4_9, Carbohydrate binding domain 2e-14
>gnl|CDD|215862 pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10 Back     alignment and domain information 
 Score =  260 bits (666), Expect = 1e-79
 Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 25/306 (8%)

Query: 578 NSFPIGSCINRSQIDNED-FVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDL 636
             F IG+ ++   + N D +V    K+FN     NE+KW   E  +G FN+  AD +++ 
Sbjct: 8   AYFYIGTAVDAGDLLNSDKYVAILKKHFNSITPENEMKWDALEPSRGQFNFSGADRIVNF 67

Query: 637 CLNHNIQTRGHCIFWEVQATVQPWIQSLN--KNDLMTAVQNRLTGLLARYKGKFRHYDVN 694
              + I+ RGH + W  Q  +  W+ ++N  K  L++ ++N +T ++ RYKGK   +DV 
Sbjct: 68  AKQNGIKVRGHTLVWHSQ--LPDWVFNINGSKATLLSRLENHITTVVGRYKGKIYAWDVV 125

Query: 695 NEMLH------GSFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKY 748
           NE          S +   LG+D     F+ A + D +A L+ NDY++E    P +  E  
Sbjct: 126 NEAFDDNGGLRNSVWYQILGEDYIEKAFRAAREADPNAKLYYNDYNIE---GPNAKREAI 182

Query: 749 IEHILNLQEQGAPVGGIGIQGHIDSPVGPI--VCSALDNLGILGLPIWFTELDVSSINEY 806
              + +L+ +G P+ GIG+Q H+ +    I  + +AL     LG+ +  TELD+S  N  
Sbjct: 183 YNLVKDLKAKGVPIDGIGMQSHLSAGGPSISEIEAALKRFASLGVEVAITELDISGYNPS 242

Query: 807 ------VRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRDSAH---LVNAEGDINEAGK 857
                  +    + + +     P   G+ +WG  + +      +   L +       A  
Sbjct: 243 SEEALQAQAARYKELFKACLKVPNCTGVTVWGVTDKYSWLSGFNNPLLFDGNYQPKPAYN 302

Query: 858 KFLNLK 863
             ++  
Sbjct: 303 AVVDAL 308

Length = 308
>gnl|CDD|214750 smart00633, Glyco_10, Glycosyl hydrolase family 10 Back     alignment and domain information
>gnl|CDD|226217 COG3693, XynA, Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216848 pfam02018, CBM_4_9, Carbohydrate binding domain Back     alignment and domain information
>gnl|CDD|216848 pfam02018, CBM_4_9, Carbohydrate binding domain Back     alignment and domain information
>gnl|CDD|216848 pfam02018, CBM_4_9, Carbohydrate binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 921
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 100.0
COG3693345 XynA Beta-1,4-xylanase [Carbohydrate transport and 100.0
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 99.64
PF02018131 CBM_4_9: Carbohydrate binding domain; InterPro: IP 99.56
PF02018131 CBM_4_9: Carbohydrate binding domain; InterPro: IP 99.56
PLN03089373 hypothetical protein; Provisional 99.51
PLN03089373 hypothetical protein; Provisional 99.37
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 99.35
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.34
TIGR03356427 BGL beta-galactosidase. 99.28
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 99.18
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 99.16
PRK10150604 beta-D-glucuronidase; Provisional 99.1
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 99.06
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 99.04
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 99.03
PRK13511469 6-phospho-beta-galactosidase; Provisional 99.03
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 98.99
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 98.99
PLN02998497 beta-glucosidase 98.93
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 98.91
PLN02814504 beta-glucosidase 98.9
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 98.87
PLN02849503 beta-glucosidase 98.86
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 98.54
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 98.52
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 98.5
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 97.88
PLN03059 840 beta-galactosidase; Provisional 97.86
PF04862159 DUF642: Protein of unknown function (DUF642); Inte 97.84
PF04862159 DUF642: Protein of unknown function (DUF642); Inte 97.81
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 97.61
PF02055496 Glyco_hydro_30: O-Glycosyl hydrolase family 30; In 97.37
COG3664428 XynB Beta-xylosidase [Carbohydrate transport and m 97.28
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 97.05
KOG0626524 consensus Beta-glucosidase, lactase phlorizinhydro 96.87
COG1874 673 LacA Beta-galactosidase [Carbohydrate transport an 96.03
PF15425212 DUF4627: Domain of unknown function (DUF4627); PDB 95.86
PF14587384 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P 95.85
COG3934 587 Endo-beta-mannanase [Carbohydrate transport and me 95.71
COG5520433 O-Glycosyl hydrolase [Cell envelope biogenesis, ou 95.65
PF03425178 CBM_11: Carbohydrate binding domain (family 11); I 95.57
PF07675167 Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro: 95.09
PF03425178 CBM_11: Carbohydrate binding domain (family 11); I 94.66
PF07675167 Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro: 94.51
cd06263157 MAM Meprin, A5 protein, and protein tyrosine phosp 94.04
cd06263157 MAM Meprin, A5 protein, and protein tyrosine phosp 93.19
PF13204289 DUF4038: Protein of unknown function (DUF4038); PD 92.08
smart00137161 MAM Domain in meprin, A5, receptor protein tyrosin 91.61
smart00137161 MAM Domain in meprin, A5, receptor protein tyrosin 91.48
COG2730407 BglC Endoglucanase [Carbohydrate transport and met 90.37
PF02057 669 Glyco_hydro_59: Glycosyl hydrolase family 59; Inte 90.27
PF15425212 DUF4627: Domain of unknown function (DUF4627); PDB 90.25
PF1362082 CarboxypepD_reg: Carboxypeptidase regulatory-like 89.55
PF00629160 MAM: MAM domain; InterPro: IPR000998 MAM is an acr 89.08
PF00629160 MAM: MAM domain; InterPro: IPR000998 MAM is an acr 86.11
PLN02161531 beta-amylase 85.99
PLN02803 548 beta-amylase 85.92
PF09212170 CBM27: Carbohydrate binding module 27; InterPro: I 85.61
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 85.34
KOG0496 649 consensus Beta-galactosidase [Carbohydrate transpo 85.06
PLN00197 573 beta-amylase; Provisional 84.8
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 82.46
COG3250 808 LacZ Beta-galactosidase/beta-glucuronidase [Carboh 82.2
PLN02705681 beta-amylase 82.04
PF14299154 PP2: Phloem protein 2 80.92
PLN02905702 beta-amylase 80.89
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=2e-64  Score=557.33  Aligned_cols=281  Identities=33%  Similarity=0.628  Sum_probs=251.4

Q ss_pred             eecCCCCeeeccCCCCCCCh-HHHHHHHhccceeecccccccccccccCCcccchhhHHHHHHHHhcCCeeEEeeEEecc
Q 002447          575 QTQNSFPIGSCINRSQIDNE-DFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEV  653 (921)
Q Consensus       575 ~~~~~F~fG~a~~~~~~~~~-~y~~~~~~~Fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrgH~L~W~~  653 (921)
                      +.++.|.||+|++...+.++ .|++++.++||.+|+||+|||..+||++|+|+|+.+|++++||+++||+||||+|+||.
T Consensus         5 ~~~~~f~~G~av~~~~~~~~~~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g~~~~~~~D~~~~~a~~~g~~vrGH~LvW~~   84 (320)
T PF00331_consen    5 AAKHKFPFGAAVNAQQLEDDPRYRELFAKHFNSVTPENEMKWGSIEPEPGRFNFESADAILDWARENGIKVRGHTLVWHS   84 (320)
T ss_dssp             HHCTTTEEEEEEBGGGHTHHHHHHHHHHHH-SEEEESSTTSHHHHESBTTBEE-HHHHHHHHHHHHTT-EEEEEEEEESS
T ss_pred             HHhccCCEEEEechhHcCCcHHHHHHHHHhCCeeeeccccchhhhcCCCCccCccchhHHHHHHHhcCcceeeeeEEEcc
Confidence            36799999999999888765 89999999999999999999999999999999999999999999999999999999995


Q ss_pred             cccchhhhcCC---CHH---HHHHHHHHHHHHHHHHcC--CeeeEEEeeccccccC---------cccccCChhHHHHHH
Q 002447          654 QATVQPWIQSL---NKN---DLMTAVQNRLTGLLARYK--GKFRHYDVNNEMLHGS---------FYQDKLGKDIRAYMF  716 (921)
Q Consensus       654 ~~~~P~W~~~~---~~~---~l~~~~~~~i~~v~~rY~--g~v~~WDVvNE~~~~~---------~~~~~lg~~~~~~af  716 (921)
                        ++|+|+...   +++   .++++|++||+++++||+  |+|.+||||||+++++         .|.+.+|++|+..||
T Consensus        85 --~~P~w~~~~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF  162 (320)
T PF00331_consen   85 --QTPDWVFNLANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAF  162 (320)
T ss_dssp             --SS-HHHHTSTTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHH
T ss_pred             --cccceeeeccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHH
Confidence              689999975   444   499999999999999999  7999999999999864         588999999999999


Q ss_pred             HHHHhcCCCceEEEecCCCcCCCCCCCCHHHHHHHHHHHHHCCCceeeEEeeccCCCCC-HHHHHHHHHHHhhcCCCEEE
Q 002447          717 KTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPV-GPIVCSALDNLGILGLPIWF  795 (921)
Q Consensus       717 ~~ar~~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~piDgIG~Q~H~~~p~-~~~i~~~l~~~a~~glpi~i  795 (921)
                      ++||+++|+++||||||+++..    .++..|+++|+.|+++|+||||||+|+|+.... ...|.+.|++|+++|+||+|
T Consensus       163 ~~A~~~~P~a~L~~NDy~~~~~----~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~~~~i~~~l~~~~~~Gl~i~I  238 (320)
T PF00331_consen  163 RAAREADPNAKLFYNDYNIESP----AKRDAYLNLVKDLKARGVPIDGIGLQSHFDAGYPPEQIWNALDRFASLGLPIHI  238 (320)
T ss_dssp             HHHHHHHTTSEEEEEESSTTST----HHHHHHHHHHHHHHHTTHCS-EEEEEEEEETTSSHHHHHHHHHHHHTTTSEEEE
T ss_pred             HHHHHhCCCcEEEeccccccch----HHHHHHHHHHHHHHhCCCccceechhhccCCCCCHHHHHHHHHHHHHcCCceEE
Confidence            9999999999999999999875    367899999999999999999999999986432 57899999999999999999


Q ss_pred             eeeccCCCC-------ccchHHHHHHHHHHHHcCC--CeEEEEEEccCCCCCCCCC-----ccccCCCCCcchHHHHHHH
Q 002447          796 TELDVSSIN-------EYVRGEDLEVMLREAFAHP--AVEGIMLWGFWELFMSRDS-----AHLVNAEGDINEAGKKFLN  861 (921)
Q Consensus       796 TE~dv~~~~-------e~~qa~~~~~~l~~~~s~p--~v~gi~~Wg~~d~~~~~~~-----~gL~d~d~~pKpa~~~~~~  861 (921)
                      |||||....       ++.||++++++|++|++||  +|+||++|||+|+.+|+++     ++|||.|++|||||+++.+
T Consensus       239 TElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D~~sW~~~~~~~~~~lfd~~~~~Kpa~~~~~~  318 (320)
T PF00331_consen  239 TELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTDGYSWRPDTPPDRPLLFDEDYQPKPAYDAIVD  318 (320)
T ss_dssp             EEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBTTGSTTGGHSEG--SSB-TTSBB-HHHHHHHH
T ss_pred             EeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCCCCcccCCCCCCCCeeECCCcCCCHHHHHHHh
Confidence            999999865       5679999999999999999  9999999999999999987     9999999999999999875

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02018 CBM_4_9: Carbohydrate binding domain; InterPro: IPR003305 The 1,4-beta-glucanase CenC from Cellulomonas fimi contains two cellulose-binding domains, CBD(N1) and CBD(N2), arranged in tandem at its N terminus Back     alignment and domain information
>PF02018 CBM_4_9: Carbohydrate binding domain; InterPro: IPR003305 The 1,4-beta-glucanase CenC from Cellulomonas fimi contains two cellulose-binding domains, CBD(N1) and CBD(N2), arranged in tandem at its N terminus Back     alignment and domain information
>PLN03089 hypothetical protein; Provisional Back     alignment and domain information
>PLN03089 hypothetical protein; Provisional Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>PF04862 DUF642: Protein of unknown function (DUF642); InterPro: IPR006946 This family contains a conserved region found in a number of uncharacterised plant proteins Back     alignment and domain information
>PF04862 DUF642: Protein of unknown function (DUF642); InterPro: IPR006946 This family contains a conserved region found in a number of uncharacterised plant proteins Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF15425 DUF4627: Domain of unknown function (DUF4627); PDB: 3SEE_A Back     alignment and domain information
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B Back     alignment and domain information
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03425 CBM_11: Carbohydrate binding domain (family 11); InterPro: IPR005087 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PF07675 Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro: IPR011628 This conserved region is found in a group of haemagglutinins and peptidases, e Back     alignment and domain information
>PF03425 CBM_11: Carbohydrate binding domain (family 11); InterPro: IPR005087 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PF07675 Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro: IPR011628 This conserved region is found in a group of haemagglutinins and peptidases, e Back     alignment and domain information
>cd06263 MAM Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain Back     alignment and domain information
>cd06263 MAM Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain Back     alignment and domain information
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D Back     alignment and domain information
>smart00137 MAM Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) Back     alignment and domain information
>smart00137 MAM Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) Back     alignment and domain information
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02057 Glyco_hydro_59: Glycosyl hydrolase family 59; InterPro: IPR001286 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF15425 DUF4627: Domain of unknown function (DUF4627); PDB: 3SEE_A Back     alignment and domain information
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A Back     alignment and domain information
>PF00629 MAM: MAM domain; InterPro: IPR000998 MAM is an acronym derived from meprin, A-5 protein, and receptor protein-tyrosine phosphatase mu Back     alignment and domain information
>PF00629 MAM: MAM domain; InterPro: IPR000998 MAM is an acronym derived from meprin, A-5 protein, and receptor protein-tyrosine phosphatase mu Back     alignment and domain information
>PLN02161 beta-amylase Back     alignment and domain information
>PLN02803 beta-amylase Back     alignment and domain information
>PF09212 CBM27: Carbohydrate binding module 27; InterPro: IPR015295 This domain is found in carbohydrate binding proteins that bind to beta-1, 4-mannooligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan Back     alignment and domain information
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00197 beta-amylase; Provisional Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02705 beta-amylase Back     alignment and domain information
>PF14299 PP2: Phloem protein 2 Back     alignment and domain information
>PLN02905 beta-amylase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query921
1i1w_A303 0.89a Ultra High Resolution Structure Of A Thermost 1e-26
1tux_A301 High Resolution Crystal Structure Of A Thermostable 2e-26
2bnj_A303 The Xylanase Ta From Thermoascus Aurantiacus Utiliz 3e-26
1xyz_A347 A Common Protein Fold And Similar Active Site In Tw 3e-26
1gok_A303 Thermostable Xylanase I From Thermoascus Aurantiacu 4e-26
1k6a_A303 Structural Studies On The Mobility In The Active Si 4e-26
1nq6_A302 Crystal Structure Of The Catalytic Domain Of Xylana 2e-24
1ta3_B303 Crystal Structure Of Xylanase (Gh10) In Complex Wit 6e-24
1xyf_A436 Endo-1,4-Beta-Xylanase From Streptomyces Olivaceovi 6e-24
2g3i_A313 Structure Of S.Olivaceoviridis Xylanase Q88aR275A M 1e-23
1e0v_A313 Xylanase 10a From Sreptomyces Lividans. Cellobiosyl 1e-23
1e0w_A313 Xylanase 10a From Sreptomyces Lividans. Native Stru 2e-23
1xas_A299 Crystal Structure, At 2.6 Angstroms Resolution, Of 3e-23
3o2l_A317 Crystal Structure Of An Inactive Kemp Elimination D 5e-23
2d1z_A436 Crystal Structure Of Catalytic-Site Mutant Xylanase 9e-23
1uqy_A378 Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixt 4e-22
2cnc_A386 Family 10 Xylanase Length = 386 5e-22
2q8x_A331 The High-resolution Crystal Structure Of Ixt6, A Th 2e-21
1b30_A302 Xylanase From Penicillium Simplicissimum, Complex W 4e-21
1n82_A331 The High-Resolution Crystal Structure Of Ixt6, A Th 4e-21
3ms8_A331 Enzyme-Substrate Interactions Of Ixt6, The Intracel 1e-20
3nyd_A316 Crystal Structure Of Kemp Eliminase Hg-2 Complexed 2e-20
3mui_A331 Enzyme-Substrate Interactions Of Ixt6, The Intracel 2e-20
1v6y_A324 Crystal Structure Of Chimeric Xylanase Between Stre 3e-20
3emc_A331 Crystal Structure Of Xynb, An Intracellular Xylanas 5e-20
1vbr_A328 Crystal Structure Of Complex Xylanase 10b From Ther 3e-17
1us3_A530 Native Xylanase10c From Cellvibrio Japonicus Length 7e-17
3mmd_A379 Crystal Structure Of The W241a Mutant Of Xylanase F 7e-17
3niy_A341 Crystal Structure Of Native Xylanase 10b From Therm 1e-16
1hiz_A379 Xylanase T6 (Xt6) From Bacillus Stearothermophilus 2e-16
3cuf_A315 Cellulomonas Fimi XylanaseCELLULASE CEX (CF XYN10A) 3e-16
1fh7_A312 Crystal Structure Of The Xylanase Cex With Xylobios 3e-16
1us2_A530 Xylanase10c (Mutant E385a) From Cellvibrio Japonicu 3e-16
3u7b_A327 A New Crystal Structure Of A Fusarium Oxysporum Gh1 1e-15
1r86_A379 Crystal Structure Of The Extracellular Xylanase Fro 6e-15
2his_A312 Cellulomonas Fimi XylanaseCELLULASE DOUBLE MUTANT E 8e-15
2dep_A356 Crystal Structure Of Xylanase B From Clostridium St 2e-14
2uwf_A356 Crystal Structure Of Family 10 Xylanase From Bacill 4e-14
2f8q_A353 An Alkali Thermostable F10 XYLANASE FROM ALKALOPHIL 2e-11
2fgl_A354 An Alkali Thermostable F10 XYLANASE FROM ALKALOPHIL 2e-11
4f8x_A335 Penicillium Canescens Endo-1,4-Beta-Xylanase Xyle L 3e-11
1w2v_A348 The 3-Dimensional Structure Of A Thermostable Mutan 2e-09
1w3h_A359 The 3-Dimensional Structure Of A Thermostable Mutan 2e-09
1w2p_A348 The 3-Dimensional Structure Of A Xylanase (Xyn10a) 2e-09
1w32_A348 The 3-Dimensional Structure Of A Thermostable Mutan 2e-09
1clx_A347 Catalytic Core Of Xylanase A Length = 347 2e-09
3rdk_A341 Protein Crystal Structure Of Xylanase A1 Of Paeniba 2e-08
1xys_A347 Catalytic Core Of Xylanase A E246c Mutant Length = 2e-08
1e5n_A348 E246c Mutant Of P Fluorescens Subsp. Cellulosa Xyla 3e-08
>pdb|1I1W|A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus Length = 303 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 20/232 (8%)
Query: 611 NELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSL-NKNDL 669
           N +KW  TE  QGNFN+  AD +++    +    RGH + W  Q  +  W+ S+ +KN L
Sbjct: 47  NSMKWDATEPSQGNFNFAGADYLVNWAQQNGKLIRGHTLVWHSQ--LPSWVSSITDKNTL 104
Query: 670 MTAVQNRLTGLLARYKGKFRHYDVNNEMLH--GSFYQ----DKLGKDIRAYMFKTAHQLD 723
              ++N +T L+ RYKGK R +DV NE  +  GS  Q    + +G+D     F+TA   D
Sbjct: 105 TNVMKNHITTLMTRYKGKIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAAD 164
Query: 724 LSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSPVGPIVCSAL 783
            +A L++NDY+++    P++  +  +  +   +  G P+ GIG Q H+ +  G  V  AL
Sbjct: 165 PNAKLYINDYNLDSASYPKT--QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQAL 222
Query: 784 DNLGILGLP-IWFTELDV--SSINEYVRGEDLEVMLREAFAHPAVEGIMLWG 832
             L   G P +  TELDV  +S  +YV       ++       +  GI +WG
Sbjct: 223 PLLASAGTPEVAITELDVAGASSTDYVN------VVNACLNVSSCVGITVWG 268
>pdb|1TUX|A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus Length = 301 Back     alignment and structure
>pdb|2BNJ|A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants Length = 303 Back     alignment and structure
>pdb|1XYZ|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 347 Back     alignment and structure
>pdb|1GOK|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus- Crystal Form Ii Length = 303 Back     alignment and structure
>pdb|1K6A|A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I Length = 303 Back     alignment and structure
>pdb|1NQ6|A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 Length = 302 Back     alignment and structure
>pdb|1TA3|B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) Length = 303 Back     alignment and structure
>pdb|1XYF|A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis Length = 436 Back     alignment and structure
>pdb|2G3I|A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT Length = 313 Back     alignment and structure
>pdb|1E0V|A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A Length = 313 Back     alignment and structure
>pdb|1E0W|A Chain A, Xylanase 10a From Sreptomyces Lividans. Native Structure At 1.2 Angstrom Resolution Length = 313 Back     alignment and structure
>pdb|1XAS|A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses Length = 299 Back     alignment and structure
>pdb|3O2L|A Chain A, Crystal Structure Of An Inactive Kemp Elimination Design Hg-1 Length = 317 Back     alignment and structure
>pdb|2D1Z|A Chain A, Crystal Structure Of Catalytic-Site Mutant Xylanase From Streptomyces Olivaceoviridis E-86 Length = 436 Back     alignment and structure
>pdb|1UQY|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In Complex With Xylopentaose Length = 378 Back     alignment and structure
>pdb|2CNC|A Chain A, Family 10 Xylanase Length = 386 Back     alignment and structure
>pdb|2Q8X|A Chain A, The High-resolution Crystal Structure Of Ixt6, A Thermophilic, Intracellular Xylanase From G. Stearothermophilus Length = 331 Back     alignment and structure
>pdb|1B30|A Chain A, Xylanase From Penicillium Simplicissimum, Complex With 1,2- (4-Deoxy-Beta-L-Threo-Hex-4-Enopyranosyluronic Acid)-Beta- 1,4-Xylotriose) Length = 302 Back     alignment and structure
>pdb|1N82|A Chain A, The High-Resolution Crystal Structure Of Ixt6, A Thermophilic, Intracellular Xylanase From G. Stearothermophilus Length = 331 Back     alignment and structure
>pdb|3MS8|A Chain A, Enzyme-Substrate Interactions Of Ixt6, The Intracellular Xylanase Of G. Stearothermophilus. Length = 331 Back     alignment and structure
>pdb|3NYD|A Chain A, Crystal Structure Of Kemp Eliminase Hg-2 Complexed With Transition State Analog 5-Nitro Benzotriazole Length = 316 Back     alignment and structure
>pdb|3MUI|A Chain A, Enzyme-Substrate Interactions Of Ixt6, The Intracellular Xylanase Of G. Stearothermophilus. Length = 331 Back     alignment and structure
>pdb|1V6Y|A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex Length = 324 Back     alignment and structure
>pdb|3EMC|A Chain A, Crystal Structure Of Xynb, An Intracellular Xylanase From Paenibacillus Barcinonensis Length = 331 Back     alignment and structure
>pdb|1VBR|A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose Length = 328 Back     alignment and structure
>pdb|1US3|A Chain A, Native Xylanase10c From Cellvibrio Japonicus Length = 530 Back     alignment and structure
>pdb|3MMD|A Chain A, Crystal Structure Of The W241a Mutant Of Xylanase From Geobacillus Stearothermophilus T-6 (Xt6) Complexed With Hydrolyzed Xylopentaose Length = 379 Back     alignment and structure
>pdb|3NIY|A Chain A, Crystal Structure Of Native Xylanase 10b From Thermotoga Petrophila Rku-1 Length = 341 Back     alignment and structure
>pdb|1HIZ|A Chain A, Xylanase T6 (Xt6) From Bacillus Stearothermophilus Length = 379 Back     alignment and structure
>pdb|3CUF|A Chain A, Cellulomonas Fimi XylanaseCELLULASE CEX (CF XYN10A) IN Complex With Cellobiose-Like Isofagomine Length = 315 Back     alignment and structure
>pdb|1FH7|A Chain A, Crystal Structure Of The Xylanase Cex With Xylobiose- Derived Inhibitor Deoxynojirimycin Length = 312 Back     alignment and structure
>pdb|1US2|A Chain A, Xylanase10c (Mutant E385a) From Cellvibrio Japonicus In Complex With Xylopentaose Length = 530 Back     alignment and structure
>pdb|3U7B|A Chain A, A New Crystal Structure Of A Fusarium Oxysporum Gh10 Xylanase Reveals The Presence Of An Extended Loop On Top Of The Catalytic Cleft Length = 327 Back     alignment and structure
>pdb|1R86|A Chain A, Crystal Structure Of The Extracellular Xylanase From Geobacillus Stearothermophilus T-6 (Xt6, Monoclinic Form): The E159aE265A MUTANT AT 1.8A RESOLUTION Length = 379 Back     alignment and structure
>pdb|2HIS|A Chain A, Cellulomonas Fimi XylanaseCELLULASE DOUBLE MUTANT E127aH205N WITH COVALENT CELLOBIOSE Length = 312 Back     alignment and structure
>pdb|2DEP|A Chain A, Crystal Structure Of Xylanase B From Clostridium Stercorarium F9 Length = 356 Back     alignment and structure
>pdb|2UWF|A Chain A, Crystal Structure Of Family 10 Xylanase From Bacillus Halodurans Length = 356 Back     alignment and structure
>pdb|2F8Q|A Chain A, An Alkali Thermostable F10 XYLANASE FROM ALKALOPHILIC Bacillus Sp. Ng-27 Length = 353 Back     alignment and structure
>pdb|2FGL|A Chain A, An Alkali Thermostable F10 XYLANASE FROM ALKALOPHILIC Bacillus Sp. Ng-27 Length = 354 Back     alignment and structure
>pdb|4F8X|A Chain A, Penicillium Canescens Endo-1,4-Beta-Xylanase Xyle Length = 335 Back     alignment and structure
>pdb|1W2V|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1W3H|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 359 Back     alignment and structure
>pdb|1W2P|A Chain A, The 3-Dimensional Structure Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1W32|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1CLX|A Chain A, Catalytic Core Of Xylanase A Length = 347 Back     alignment and structure
>pdb|3RDK|A Chain A, Protein Crystal Structure Of Xylanase A1 Of Paenibacillus Sp. Jdr-2 Length = 341 Back     alignment and structure
>pdb|1XYS|A Chain A, Catalytic Core Of Xylanase A E246c Mutant Length = 347 Back     alignment and structure
>pdb|1E5N|A Chain A, E246c Mutant Of P Fluorescens Subsp. Cellulosa Xylanase A In Complex With Xylopentaose Length = 348 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query921
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 1e-98
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 1e-08
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 4e-08
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 4e-91
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 3e-90
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 1e-20
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 2e-19
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 1e-89
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 2e-88
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 1e-86
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 2e-85
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 3e-83
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 5e-80
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 3e-76
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 3e-76
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 4e-75
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 2e-74
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 3e-74
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 1e-72
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 3e-71
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 6e-71
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 1e-68
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 1e-67
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 2e-67
1dyo_A160 Endo-1,4-beta-xylanase Y; carbohydrate-binding mod 2e-28
1dyo_A160 Endo-1,4-beta-xylanase Y; carbohydrate-binding mod 5e-23
1dyo_A160 Endo-1,4-beta-xylanase Y; carbohydrate-binding mod 2e-21
2zez_A144 Family 16 CBM-2, S-layer associated multidomain en 6e-19
2zez_A144 Family 16 CBM-2, S-layer associated multidomain en 3e-12
2zez_A144 Family 16 CBM-2, S-layer associated multidomain en 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
2zex_A147 S-layer associated multidomain endoglucanase; fami 1e-06
2zex_A147 S-layer associated multidomain endoglucanase; fami 9e-06
2zex_A147 S-layer associated multidomain endoglucanase; fami 5e-04
2xom_A152 Arabinogalactan endo-1,4-beta-galactosidase; hydro 6e-04
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Length = 530 Back     alignment and structure
 Score =  318 bits (816), Expect = 1e-98
 Identities = 87/491 (17%), Positives = 167/491 (34%), Gaps = 76/491 (15%)

Query: 394 GNCTLSIGTGSPHILPPMARDSLGPHEPLSGHYILVTNRTQTWMGPAQMITEKLKLFLTY 453
           GN  + +   +        R +       SG        T   +G        +    T 
Sbjct: 7   GNVVIEVDMANGW------RGNASGSTSHSGITYSADGVTFAALGDGVGAVFDIARPTTL 60

Query: 454 QVAAWVRIGSGAT----GPQNVNIALGVDNQWVNGGQVEINDDRWHEIGGSFRIEK-QPS 508
           + A    + + +        N+ I   +   W  G         W  +  S  +      
Sbjct: 61  EDAVIAMVVNVSAEFKASEANLQIFAQLKEDWSKGE--------WDCLAASSELTADTDL 112

Query: 509 KVMVYIQGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLG 568
            +   I       +     +Q+         +        I  + V + L+    S+ + 
Sbjct: 113 TLTCTIDEDDDKFNQTARDVQVG-------IQAKGTPAGTITIKSVTITLAQEAYSANVD 165

Query: 569 TFVKVKQTQNSFPIGSCINRSQ------IDNEDFVKFFTKYFNWAVFGNELKWYWTESQQ 622
               +    + FPIG  ++ +       + N        K+FN    GN +K  + +  +
Sbjct: 166 HLRDL--APSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTE 223

Query: 623 GNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSL--NKNDLMTAVQNRLTGL 680
           GNFN+ +AD  +D    +N+   GH + W     V  ++++   +  D + A+   +T +
Sbjct: 224 GNFNFTNADAFVDWATENNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTI 283

Query: 681 LARY--KGKFRHYDVNNEMLH----------GSFYQDKLGKDIR--AYMFKTAHQLDLSA 726
           +  Y  KG    +DV N  +            S +  K G         F+TA   D + 
Sbjct: 284 VDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAV 343

Query: 727 TLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHI--DSPVGPIVCSALD 784
            L+ NDY++E          K ++ + + Q +  P+ G+G Q H+  + P    + +A+ 
Sbjct: 344 ILYYNDYNIEQNNAKT---TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMK 400

Query: 785 NLGILGLPIWFTELDVSSINEYVRG------------------EDLEVMLREAFAHPAVE 826
            +  LGL +  TELDV+    +                     +    +++       V 
Sbjct: 401 KVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVN 460

Query: 827 ---GIMLWGFW 834
              GI +WG  
Sbjct: 461 QRGGISVWGTT 471
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Length = 530 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Length = 530 Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Length = 313 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Length = 540 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Length = 540 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Length = 540 Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Length = 303 Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Length = 302 Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Length = 347 Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Length = 315 Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Length = 303 Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} PDB: 3nj3_A* 1vbr_A* 1vbu_A Length = 341 Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} PDB: 3emq_A* 3emc_A* Length = 331 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Length = 331 Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Length = 335 Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Length = 379 Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Length = 327 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Length = 378 Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Length = 348 Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Length = 356 Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Length = 436 Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Length = 356 Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Length = 341 Back     alignment and structure
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A Length = 160 Back     alignment and structure
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A Length = 160 Back     alignment and structure
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A Length = 160 Back     alignment and structure
>2zez_A Family 16 CBM-2, S-layer associated multidomain endoglucanase; family 16 carbohydrate binding module-2; 1.90A {Thermoanaerobacterium polysaccharolytiorganism_taxid} Length = 144 Back     alignment and structure
>2zez_A Family 16 CBM-2, S-layer associated multidomain endoglucanase; family 16 carbohydrate binding module-2; 1.90A {Thermoanaerobacterium polysaccharolytiorganism_taxid} Length = 144 Back     alignment and structure
>2zez_A Family 16 CBM-2, S-layer associated multidomain endoglucanase; family 16 carbohydrate binding module-2; 1.90A {Thermoanaerobacterium polysaccharolytiorganism_taxid} Length = 144 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zex_A S-layer associated multidomain endoglucanase; family 16 CBM-1 cellopentaose complex, glycosidase, hydrolase; HET: BGC; 1.20A {Thermoanaerobacteriumpolysaccharolyticum} PDB: 2zew_A 2zey_A* 3oea_A* 3oeb_A* Length = 147 Back     alignment and structure
>2zex_A S-layer associated multidomain endoglucanase; family 16 CBM-1 cellopentaose complex, glycosidase, hydrolase; HET: BGC; 1.20A {Thermoanaerobacteriumpolysaccharolyticum} PDB: 2zew_A 2zey_A* 3oea_A* 3oeb_A* Length = 147 Back     alignment and structure
>2zex_A S-layer associated multidomain endoglucanase; family 16 CBM-1 cellopentaose complex, glycosidase, hydrolase; HET: BGC; 1.20A {Thermoanaerobacteriumpolysaccharolyticum} PDB: 2zew_A 2zey_A* 3oea_A* 3oeb_A* Length = 147 Back     alignment and structure
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A* Length = 152 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 921
d1i1wa_303 c.1.8.3 (A:) Xylanase A, catalytic core {Thermoasc 5e-63
d1v0la_302 c.1.8.3 (A:) Xylanase A, catalytic core {Streptomy 7e-60
d1r85a_371 c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus 9e-60
d1nq6a_302 c.1.8.3 (A:) Xylanase A, catalytic core {Streptomy 2e-59
d1ta3b_301 c.1.8.3 (B:) Xylanase A, catalytic core {Emericell 1e-56
d1xyza_320 c.1.8.3 (A:) Xylanase {Clostridium thermocellum, X 3e-55
d1ur1a_350 c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 3 4e-55
d1fh9a_312 c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomo 2e-54
d1w32a_346 c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomon 1e-52
d1vbua1324 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima 1e-52
d1n82a_330 c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus 4e-52
d1us3a2364 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japon 2e-47
d1h6ya_157 b.18.1.7 (A:) Xylan-binding domain {Clostridium th 6e-22
d1h6ya_157 b.18.1.7 (A:) Xylan-binding domain {Clostridium th 9e-17
d1h6ya_157 b.18.1.7 (A:) Xylan-binding domain {Clostridium th 2e-16
d1cx1a_153 b.18.1.14 (A:) Cellulose-binding domain of cellula 6e-05
d1cx1a_153 b.18.1.14 (A:) Cellulose-binding domain of cellula 0.003
d1gu3a_142 b.18.1.14 (A:) Cellulose-binding domain of cellula 7e-04
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Length = 303 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Xylanase A, catalytic core
species: Thermoascus aurantiacus [TaxId: 5087]

 Score =  213 bits (543), Expect = 5e-63
 Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 18/296 (6%)

Query: 580 FPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLN 639
              G   +++++            F      N +KW  TE  QGNFN+  AD +++    
Sbjct: 16  VYFGVATDQNRLTTGKNAAIIQANFGQVTPENSMKWDATEPSQGNFNFAGADYLVNWAQQ 75

Query: 640 HNIQTRGHCIFWEVQATVQPWIQSLNKNDLMT-AVQNRLTGLLARYKGKFRHYDVNNEML 698
           +    RGH + W  Q  +  W+ S+   + +T  ++N +T L+ RYKGK R +DV NE  
Sbjct: 76  NGKLIRGHTLVWHSQ--LPSWVSSITDKNTLTNVMKNHITTLMTRYKGKIRAWDVVNEAF 133

Query: 699 HG------SFYQDKLGKDIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHI 752
           +       + + + +G+D     F+TA   D +A L++NDY+++    P++  +  +  +
Sbjct: 134 NEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKT--QAIVNRV 191

Query: 753 LNLQEQGAPVGGIGIQGHIDSPVGPIVCSALDNLGILGLP-IWFTELDVSSINEYVRGED 811
              +  G P+ GIG Q H+ +  G  V  AL  L   G P +  TELDV+  +      D
Sbjct: 192 KKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVAGASS----TD 247

Query: 812 LEVMLREAFAHPAVEGIMLWGFWELFMSRDSAH--LVNAEGDINEAGKKFLNLKQE 865
              ++       +  GI +WG  +    R S    L +   +   A    +   Q+
Sbjct: 248 YVNVVNACLNVSSCVGITVWGVADPDSWRASTTPLLFDGNFNPKPAYNAIVQNLQQ 303
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Length = 302 Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Length = 371 Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Length = 302 Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Length = 301 Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Length = 320 Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Length = 350 Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Length = 312 Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Length = 346 Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Length = 324 Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Length = 330 Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Length = 364 Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Length = 157 Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Length = 157 Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Length = 157 Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Length = 153 Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Length = 153 Back     information, alignment and structure
>d1gu3a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Length = 142 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query921
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 100.0
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 100.0
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 100.0
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 100.0
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 100.0
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 100.0
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 100.0
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 100.0
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 100.0
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 100.0
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 100.0
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 100.0
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 99.94
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.93
d1h6ya_157 Xylan-binding domain {Clostridium thermocellum [Ta 99.9
d1h6ya_157 Xylan-binding domain {Clostridium thermocellum [Ta 99.89
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 99.88
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 99.88
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 99.73
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 99.71
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 99.7
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 99.69
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 99.69
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 99.68
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 99.66
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 99.63
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 99.63
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 99.62
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 99.6
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 99.59
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 99.58
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.58
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 99.58
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 99.52
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 99.52
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 99.51
d1cx1a_153 Cellulose-binding domain of cellulase C {Cellulomo 99.5
d1gu3a_142 Cellulose-binding domain of cellulase C {Cellulomo 99.5
d1cx1a_153 Cellulose-binding domain of cellulase C {Cellulomo 99.49
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 99.49
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 99.47
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 99.46
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 99.46
d1gu3a_142 Cellulose-binding domain of cellulase C {Cellulomo 99.45
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 99.39
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 99.39
d1guia_155 Carbohydrate binding module from laminarinase 16A 99.38
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 99.38
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 99.37
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 99.34
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 99.31
d1guia_155 Carbohydrate binding module from laminarinase 16A 99.24
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 99.18
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 99.15
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 99.08
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 98.95
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 98.87
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 98.83
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 98.76
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 98.59
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 98.57
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 98.34
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 98.33
d1k42a_168 Carbohydrate binding module from a thermostable xy 98.33
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 98.07
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 97.84
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 97.71
d1k42a_168 Carbohydrate binding module from a thermostable xy 97.41
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 96.97
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 96.76
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 95.75
d1pmhx_183 Beta-1,4-mannanase ManA {Caldicellulosiruptor sacc 95.74
d1pmhx_183 Beta-1,4-mannanase ManA {Caldicellulosiruptor sacc 95.46
d1wkya1151 Endo-beta-1,4-mannanase C-terminal domain {Bacillu 95.03
d1wmxa_173 Endoglucanase CelJ {Clostridium thermocellum [TaxI 94.64
d2c9aa2163 Receptor-type tyrosine-protein phosphatase mu {Hum 92.81
d1nkga187 Rhamnogalacturonase B, RhgB, middle domain {Asperg 92.42
d1wmxa_173 Endoglucanase CelJ {Clostridium thermocellum [TaxI 92.4
d1v0aa1167 Endoglucanase H {Clostridium thermocellum [TaxId: 91.54
d1wkya1151 Endo-beta-1,4-mannanase C-terminal domain {Bacillu 89.81
d1wdpa1490 beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} 86.76
d1uwwa_184 Endoglucanase (alkaline cellulase) {Bacillus sp. 1 86.67
d1fa2a_498 beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI 85.26
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Xylanase
species: Cellvibrio mixtus [TaxId: 39650]

Probab=100.00  E-value=0  Score=511.67  Aligned_cols=287  Identities=28%  Similarity=0.451  Sum_probs=258.5

Q ss_pred             ECCCCCEEECCCCCCCC--CHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECC
Q ss_conf             04887711023798889--8578999982065000166556622344588346101689999998369846876577435
Q 002447          576 TQNSFPIGSCINRSQID--NEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEV  653 (921)
Q Consensus       576 ~~~~F~fG~a~~~~~~~--~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~  653 (921)
                      .++.|+||+|+....+.  ++.|++++.++||.+|+||+|||..+||++|+|+|+.+|++++||++|||+||||+|+||.
T Consensus         6 ~~~~F~~G~av~~~~~~~~~~~y~~~~~~~Fn~~t~eN~~KW~~ie~~~G~~~~~~~D~~v~~a~~~gi~vrGH~LvW~~   85 (350)
T d1ur1a_           6 YKDNFLIGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWHS   85 (350)
T ss_dssp             TTTTCEEEEEECHHHHTTCCHHHHHHHHHHCSEEEESSTTSHHHHBCTTCCBCCHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred             HHCCCCEEEEECHHHCCCCCHHHHHHHHHHCCEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECC
T ss_conf             55769367986504315778799999998758233255676152168899657488999999999789979888888746


Q ss_pred             CCCCHHHHCC------CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC------CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             4453142217------998899999999999998770790019995315554------6733134794699999999984
Q 002447          654 QATVQPWIQS------LNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLH------GSFYQDKLGKDIRAYMFKTAHQ  721 (921)
Q Consensus       654 ~~~~P~W~~~------~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~------~~~~~~~lg~~~~~~af~~Ar~  721 (921)
                        +.|+|+..      +++++++..+++||+.+++||+|+|++||||||+++      .+.|.+.+|++|+..+|++||+
T Consensus        86 --~~P~w~~~~~~~~~~~~~~l~~~~~~~I~~v~~ry~g~i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~  163 (350)
T d1ur1a_          86 --QIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANE  163 (350)
T ss_dssp             --SSCGGGTBCTTSCBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred             --CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
T ss_conf             --556631136776656889999999999999997458863289984254268888553313420083899999999986


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--CCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             199966997037776799999987799999999997799620479512699--998779999999986359979996302
Q 002447          722 LDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID--SPVGPIVCSALDNLGILGLPIWFTELD  799 (921)
Q Consensus       722 ~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~--~p~~~~~~~~Ld~~~~~g~pi~iTE~d  799 (921)
                      +||+++|++||||++.+    .++..|+++++.|+++|+||||||+|+|+.  .+....+++.|++|+++|+||+|||||
T Consensus       164 ~dP~akL~~Ndyn~~~~----~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~~~~~~~~~i~~~l~~~~~lg~~i~iTElD  239 (350)
T d1ur1a_         164 VDPKAHLMYNDYNIERT----GKREATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD  239 (350)
T ss_dssp             HCTTSEEEEEESSTTST----THHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred             HCCCCEEEECCCCCCCC----CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf             39886686435665344----44277999999999689971189972451589999999999999998639713533344


Q ss_pred             CCCCC-------------------------------CCCHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCC------
Q ss_conf             57997-------------------------------4231899999999998199-968999972577888789------
Q 002447          800 VSSIN-------------------------------EYVRGEDLEVMLREAFAHP-AVEGIMLWGFWELFMSRD------  841 (921)
Q Consensus       800 v~~~~-------------------------------e~~qa~~~~~~l~~~~s~p-~v~gi~~Wg~~d~~~~~~------  841 (921)
                      +....                               +..||+.|++++++|++|| +|+||+||||+|+.+|++      
T Consensus       240 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~qA~~y~~~~~~~~~~~~~v~~it~Wg~~D~~sW~~~~~~~~  319 (350)
T d1ur1a_         240 VDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSDDASWLNGFPIPG  319 (350)
T ss_dssp             EECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBGGGCGGGTSSSTT
T ss_pred             EECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf             33045533344421000010033357555678699999999999999999985679732899978943865666889888


Q ss_pred             ---CCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             ---722327899855589999999998325
Q 002447          842 ---SAHLVNAEGDINEAGKKFLNLKQEWLS  868 (921)
Q Consensus       842 ---~~~L~d~d~~pKpa~~~~~~l~~~w~t  868 (921)
                         .++|||.|++|||||.++++|.++++.
T Consensus       320 ~~~~plL~d~d~~pKpAy~~~~dl~~~~~~  349 (350)
T d1ur1a_         320 RTNYPLLFDRKLQPKDAYFRLLDLKRLEHH  349 (350)
T ss_dssp             CCCCCSSBCTTSCBCHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHCHHHCHHC
T ss_conf             879887889998887899999652312202
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1gu3a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gu3a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1k42a_ b.18.1.14 (A:) Carbohydrate binding module from a thermostable xylanase {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1k42a_ b.18.1.14 (A:) Carbohydrate binding module from a thermostable xylanase {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pmhx_ b.18.1.18 (X:) Beta-1,4-mannanase ManA {Caldicellulosiruptor saccharolyticus [TaxId: 44001]} Back     information, alignment and structure
>d1pmhx_ b.18.1.18 (X:) Beta-1,4-mannanase ManA {Caldicellulosiruptor saccharolyticus [TaxId: 44001]} Back     information, alignment and structure
>d1wkya1 b.18.1.31 (A:340-490) Endo-beta-1,4-mannanase C-terminal domain {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1wmxa_ b.18.1.24 (A:) Endoglucanase CelJ {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2c9aa2 b.29.1.25 (A:21-183) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} Back     information, alignment and structure
>d1wmxa_ b.18.1.24 (A:) Endoglucanase CelJ {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1v0aa1 b.18.1.30 (A:4-170) Endoglucanase H {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wkya1 b.18.1.31 (A:340-490) Endo-beta-1,4-mannanase C-terminal domain {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1uwwa_ b.18.1.23 (A:) Endoglucanase (alkaline cellulase) {Bacillus sp. 1139 [TaxId: 1411]} Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Back     information, alignment and structure