Citrus Sinensis ID: 002468
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 918 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.986 | 0.961 | 0.762 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.828 | 0.957 | 0.588 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.758 | 0.846 | 0.640 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.840 | 0.985 | 0.578 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.701 | 0.878 | 0.409 | 1e-158 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.486 | 0.864 | 0.485 | 1e-127 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.496 | 0.888 | 0.479 | 1e-127 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.479 | 0.888 | 0.483 | 1e-127 | |
| Q07158 | 488 | Alpha,alpha-trehalose-pho | yes | no | 0.474 | 0.893 | 0.495 | 1e-127 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.476 | 0.931 | 0.490 | 1e-126 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1452 bits (3758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/945 (76%), Positives = 798/945 (84%), Gaps = 39/945 (4%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPGN YN +SS+IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTPNEG--CERLDGRTFSRQRLLVVANRLPVSAIRRG------- 111
D+ V++ LEG A+ CER + R ++RQRLLVVANRLPVSA+RRG
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 112 ------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 159
VKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 160 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 219
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 220 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY 279
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 339
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 340 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 399
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 400 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 460 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 519
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 520 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 579
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 580 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 639
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 640 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 699
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 700 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 759
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 760 EIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRP---TDAIKVPGE 816
EIVHSK M T IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP + A G+
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGD 836
Query: 817 RRQALK-----------VASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 865
RR K +S +S + +QR Q+ K NH+ N R+PS +K S+
Sbjct: 837 RRPPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISW 896
Query: 866 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910
NVLDL ENYFSCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 897 NVLDLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 607/844 (71%), Gaps = 83/844 (9%)
Query: 91 FSRQRLLVVANRLPVSAIRRG-------------------VKEFEARWIGWAGVNVPDEI 131
+R RLLVV+ LPV+A R G +KEFE +WIGW GV+V D I
Sbjct: 1 MARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAI 60
Query: 132 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 191
G+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ
Sbjct: 61 GKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQ 119
Query: 192 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE 251
+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE
Sbjct: 120 YEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSE 179
Query: 252 IHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 311
+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA
Sbjct: 180 MYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAV 239
Query: 312 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371
FPIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLE
Sbjct: 240 FPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLE 299
Query: 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 431
EN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 300 ENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDF 359
Query: 432 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 491
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVN
Sbjct: 360 NQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVN 419
Query: 492 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELND 542
PWNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 420 PWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIE 479
Query: 543 TVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREME 601
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M
Sbjct: 480 ITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MN 536
Query: 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWM 661
L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+
Sbjct: 537 LELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWV 596
Query: 662 TTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 721
T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQH
Sbjct: 597 TRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQH 656
Query: 722 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 781
LW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FL
Sbjct: 657 LWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFL 716
Query: 782 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQ 841
GKDEDVY FFEPEL +K ++ + +
Sbjct: 717 GKDEDVYTFFEPEL---------------------------------TKKAKSLSSSGSD 743
Query: 842 APEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFL 901
+P+K S ++DL ENYFS A+G+ T AR+ L SSD+VV +
Sbjct: 744 SPKK-----------------VSSTIVDLKGENYFSVAIGQTHTKARYFLDSSDDVVKLI 786
Query: 902 KKLA 905
KL
Sbjct: 787 GKLC 790
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/723 (64%), Positives = 584/723 (80%), Gaps = 27/723 (3%)
Query: 93 RQRLLVVANRLPVSAIRRG--------------------VKEFEARWIGWAGVNVPDEIG 132
R RLLVVANRLPVSA R G +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 133 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 192
+ ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 252
AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 253 HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 312
++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 313 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 372
PIGID +RFIR ++ V + ELQE FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 373 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 432
N WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGRFG+++++PIHHLD S+DF
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 433 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 492
LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 493 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 552
W++TEV++AI ALNM EERE RH NF +V TH+A++W F+SELN + E++++++
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 553 QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL 612
++P L E D I++Y +SNNRL+ILGF TL EP+++ +EM+LKL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS------GTKEMDLKLNPELKGTL 543
Query: 613 NALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEW 672
ALC+DPKTT+VVLS S +N+L+KNF E N+WLAAENGMF + TTG+W+T MP+++N++W
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDW 603
Query: 673 VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 732
VD +K+VF+YFT+RTPRS+FE ETSLVWNY+YADVEFGR QARD+LQ+LW GPISNASV
Sbjct: 604 VDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASV 663
Query: 733 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792
+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+V C G+FL KDED+Y FFE
Sbjct: 664 DVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFE 723
Query: 793 PEL 795
++
Sbjct: 724 SKI 726
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/825 (57%), Positives = 607/825 (73%), Gaps = 53/825 (6%)
Query: 93 RQRLLVVANRLPVSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDE 152
RQ LLVVANRLP SA R G + N+ E + A++K+LAE +CIPVFL+E
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLLVE--KDAVSKSLAEMKCIPVFLNE 67
Query: 153 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKD 212
+ QYYNGY N ILWP+ H++GLPQE T ++F++Q+ AY KAN+MF DV+ ++YKD
Sbjct: 68 -VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYDAYKKANRMFLDVIKENYKD 126
Query: 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLV 272
GD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSEI++TLPSRS+LLR+VLAADL+
Sbjct: 127 GDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIYKTLPSRSELLRSVLAADLI 186
Query: 273 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQV 332
FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV P+GI RFI+ ++ V
Sbjct: 187 SFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLPMGIYPNRFIKTCKLPEVIQ 246
Query: 333 HIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 392
+ EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN +WR K+VL+QIAVPTR +
Sbjct: 247 QMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDENPNWRDKIVLVQIAVPTRNE 306
Query: 393 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDG 452
VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D LCALYA++DV LVTSLRDG
Sbjct: 307 VPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNYLCALYAISDVMLVTSLRDG 366
Query: 453 MNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEE 512
+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LVNPWN+TEV++AI +ALNM EE
Sbjct: 367 LNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPWNVTEVSSAIKKALNMPYEE 426
Query: 513 REKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNN 572
RE RH NF +V TH+A++W F+SELND E++L+I+++P L + D I+RY SNN
Sbjct: 427 RETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRKIPHELPQQDVIQRYSLSNN 486
Query: 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 632
RL+ILGF T+TEP R +EM+LKL+P+LK+ L ALC+DPKTT+VVLS S +N
Sbjct: 487 RLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLKALCNDPKTTVVVLSRSGKN 540
Query: 633 VLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF 692
+LDKNF EY +WLAAENGMFL+ TT +W+T MP+++N++WVD LK+VF+YFT+RTPRS F
Sbjct: 541 ILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNLDWVDGLKNVFKYFTDRTPRSFF 600
Query: 693 EQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGA 752
E +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNAS EVV+G SVEV A+GVTK
Sbjct: 601 EASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAEVVRGKYSVEVHAIGVTKEP 660
Query: 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIK 812
I IL EIVH K M T IDYV C G+FL KDED+Y FFE E+ + K
Sbjct: 661 EIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTFFESEIL-------------SPK 707
Query: 813 VPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNK 872
+ E R ++ K K S NVLDL +
Sbjct: 708 LSHETRSKSSSSNHSLEK-------------------------------KVSLNVLDLKQ 736
Query: 873 ENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSSHEAHNGP 917
ENYFS A+G+ RT AR+++ SS VV+ L KLA A+++ + P
Sbjct: 737 ENYFSTAIGQARTKARYVVDSSHNVVNLLHKLAVANTTTTSVKKP 781
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/713 (40%), Positives = 435/713 (61%), Gaps = 69/713 (9%)
Query: 95 RLLVVANRLPVSAIRRGVKEFEAR------------------WIGWAGVNVPDEIGQKAL 136
RL+VV+NRLPVS + ++ + W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKSNFIWVGWIGAEIEEDDRKEIK 76
Query: 137 TKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQEDRLATTRSFQSQFAA 194
+ CIPVFL E + +++YNG+ N +LWPLFHYL L +DR+ + +
Sbjct: 77 ELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WNS 127
Query: 195 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 254
Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D ++G+FLH PFPSSEI R
Sbjct: 128 YVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIFR 187
Query: 255 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPI 314
LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E P GV + R +V FP+
Sbjct: 188 VLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFPV 247
Query: 315 GIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS 374
GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKGIPQKL A E+ ++
Sbjct: 248 GIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKYP 307
Query: 375 DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPAL 434
+W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++ PIH+L +S+D L
Sbjct: 308 EWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSEL 367
Query: 435 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWN 494
ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPWN
Sbjct: 368 TALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPWN 426
Query: 495 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN------DTVVEAQ 548
EVA++I +L M PEERE++H +VT HTA W FV ELN D +V Q
Sbjct: 427 TEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTIQ 486
Query: 549 -LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG-RRGDQIREMELKLHP 606
L I++V ++ Y +S RLLI ++ TL + P R Q
Sbjct: 487 KLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQ---------- 527
Query: 607 DLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC-TTGKWMTTMP 665
+L + L +DPKT + +LSG D+ L + F + L+AE G F + + +W +P
Sbjct: 528 ELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPESTEWEQQVP 587
Query: 666 EHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTG 725
+++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR++ HL
Sbjct: 588 S-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL--- 643
Query: 726 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778
N ++V+ G K++ VR+ + +++ +++ + + +D +L IG
Sbjct: 644 --DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI-----PKGLDLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/480 (48%), Positives = 318/480 (66%), Gaps = 33/480 (6%)
Query: 86 LDGRTFSRQ-RLLVVANRLPVSAIRR--GVKEFEA------------------RWIGWAG 124
L+ TF + RLL+V+NRLP++ R G +F +W GW G
Sbjct: 4 LENPTFQNEARLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPG 63
Query: 125 VNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 184
+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P E
Sbjct: 64 LEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD- 120
Query: 185 TRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVG 240
+S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D +K+G
Sbjct: 121 ----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIG 176
Query: 241 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGV 300
+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG TP G+
Sbjct: 177 FFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGI 236
Query: 301 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360
E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+P
Sbjct: 237 EFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVP 296
Query: 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420
QKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +
Sbjct: 297 QKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFM 356
Query: 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 480
PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAA
Sbjct: 357 PIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAA 416
Query: 481 QSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540
QSL G+I++NPWN E+A A A+ MS E+R +V +T+ W ++FV+EL
Sbjct: 417 QSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/488 (47%), Positives = 316/488 (64%), Gaps = 32/488 (6%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRR--GVKEFEA----------------- 117
S ++ + L G + +RL+VV+NRLP++ R+ G +F
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 118 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 176
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 177 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--- 233
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 234 -NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 292
D+K+G+FLHTPFPSSEI+R LP R+++L VL DLVGFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 293 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 352
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 353 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 412
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 413 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 472
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 473 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 532
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 533 AETFVSEL 540
++FV EL
Sbjct: 474 GQSFVGEL 481
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/476 (48%), Positives = 318/476 (66%), Gaps = 36/476 (7%)
Query: 92 SRQRLLVVANRLPVSAIR--------------------RGVKE-FEARWIGWAGVNVPDE 130
S ++VV+NRLPV+ + G+K+ + +W GW G+ +PD+
Sbjct: 14 SGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD 73
Query: 131 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 190
+ L + +P+FL ++I +YNG+ N+ILWPLFHY P E ++
Sbjct: 74 EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----EN 126
Query: 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHT 245
+ AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHT
Sbjct: 127 AWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHT 186
Query: 246 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 305
PFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 187 PFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGR 246
Query: 306 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 365
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A
Sbjct: 247 FVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHA 306
Query: 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 425
E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH +
Sbjct: 307 MEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFM 366
Query: 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA 485
+S+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL
Sbjct: 367 HKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN- 425
Query: 486 GAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 540
GAI+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL
Sbjct: 426 GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q07158|TPS1_KLULA Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/472 (49%), Positives = 309/472 (65%), Gaps = 36/472 (7%)
Query: 96 LLVVANRLPVS---------------------AIRRGVKEFEARWIGWAGVNVPDEIGQK 134
++V++NRLPV+ A++ K +W GW G+ VPDE K
Sbjct: 18 VIVISNRLPVTIKKDEKTGEYEYSMSSGGLVTALQGLKKSTTFQWYGWPGLEVPDEDKAK 77
Query: 135 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 194
+ L + IP+FL +++ +YNG+ N+ILWPLFHY P E T + A
Sbjct: 78 VKRELLEKFNAIPIFLSDEVADLHYNGFSNSILWPLFHYH--PGEITFDDT-----AWLA 130
Query: 195 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPS 249
Y +AN FAD + + D DVVW HDYHLM LP+ +++ ++K+GWFLHTPFPS
Sbjct: 131 YNEANMAFADEIEGNINDNDVVWVHDYHLMLLPEMIRQRVIAKKLKNIKIGWFLHTPFPS 190
Query: 250 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 309
SEI+R LP R ++L+ VL+ DL+GFHTYDYARHF+SA RIL P GVE GR V
Sbjct: 191 SEIYRILPVRQEILKGVLSCDLIGFHTYDYARHFLSAVQRILNVNTLPNGVEFDGRFVNV 250
Query: 310 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369
AFPIGID E F L+ + V IKEL+E+F G K+++GVDRLD IKG+PQKL A E F
Sbjct: 251 GAFPIGIDVETFTEGLKQDAVIKRIKELKESFKGCKIIIGVDRLDYIKGVPQKLHALEVF 310
Query: 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429
L + +W GKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT VPIH + RS+
Sbjct: 311 LGAHPEWIGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTAEFVPIHFMHRSI 370
Query: 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 489
F L +LYAV+DV LV+S RDGMNLVSYE+++CQ+ KKG LILSEF GAAQSL GA++
Sbjct: 371 PFQELISLYAVSDVCLVSSTRDGMNLVSYEYISCQEEKKGTLILSEFTGAAQSLN-GALI 429
Query: 490 VNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 540
VNPWN ++A +I AL + PEE+ +W + +++ +T+ W E FV EL
Sbjct: 430 VNPWNTDDLAESINEALTV-PEEKRAANWEKLYKYISKYTSAFWGENFVHEL 480
|
Appears to play a role in controlling and restricting the influx of sugar into glycolysis, probably at the level of hexokinase. Necessary for trehalose-6-phosphate synthase and phosphatase activities. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/471 (49%), Positives = 309/471 (65%), Gaps = 34/471 (7%)
Query: 96 LLVVANRLPVSAIRR-------------------GVKEFEA-RWIGWAGVNVPDEIGQKA 135
+LV++NRLPV+ R G+K+ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 136 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY 195
+ C+PVF+D+D+ +YNG+ N+ILWPLFHY P E Q + AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 196 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD------MKVGWFLHTPFPS 249
+AN++FA V K GD+VW HDYHLM LP+ L+E + +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 250 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 309
SEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL E P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 310 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369
AFPIGID +F+ + VQ I +LQ+ F G KV++GVDRLD IKG+PQKL AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429
L E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRING FGT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 489
DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 490 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540
VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q W E FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 918 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.876 | 0.854 | 0.798 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.747 | 0.862 | 0.644 | 4.7e-259 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.713 | 0.893 | 0.405 | 2.8e-137 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.462 | 0.494 | 0.380 | 4.6e-124 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.467 | 0.866 | 0.493 | 1.6e-113 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.453 | 0.786 | 0.507 | 7e-113 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.468 | 0.853 | 0.488 | 4.9e-112 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.477 | 0.916 | 0.485 | 3.4e-111 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.477 | 0.916 | 0.485 | 3.4e-111 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.465 | 0.832 | 0.494 | 9e-109 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3408 (1204.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 655/820 (79%), Positives = 711/820 (86%)
Query: 105 VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCN 164
VSA+ GVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYYNGYCN
Sbjct: 123 VSALL-GVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCN 181
Query: 165 NILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM 224
NILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCHDYHLM
Sbjct: 182 NILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLM 241
Query: 225 FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFV 284
FLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDYARHFV
Sbjct: 242 FLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFV 301
Query: 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 344
SACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E FAGR
Sbjct: 302 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGR 361
Query: 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVH 404
KVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+LTSQVH
Sbjct: 362 KVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVH 421
Query: 405 EIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464
EIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYEFVACQ
Sbjct: 422 EIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 481
Query: 465 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524
+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH HNF HV
Sbjct: 482 EAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHV 541
Query: 525 TTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLT 584
THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGFNATLT
Sbjct: 542 KTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGFNATLT 601
Query: 585 EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 644
EPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF EY++W
Sbjct: 602 EPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYDMW 661
Query: 645 LAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYK 704
LAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL+WNYK
Sbjct: 662 LAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNYK 721
Query: 705 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHS 764
YAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL EIVHS
Sbjct: 722 YADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHS 781
Query: 765 KKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTD---AIKVPGERRQAL 821
K M T IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP+ A G+RR
Sbjct: 782 KSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPPS 841
Query: 822 KVA---SRGSSKISQGK--------TQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDL 870
K ++ SK S +QR Q+ K NH+ N R+PS +K S+NVLDL
Sbjct: 842 KSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNVLDL 901
Query: 871 NKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910
ENYFSCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 902 KGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2367 (838.3 bits), Expect = 4.7e-259, Sum P(3) = 4.7e-259
Identities = 452/701 (64%), Positives = 545/701 (77%)
Query: 105 VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCN 164
VSA+ G+KEFE +WIGW GV+V D IG+K L+ LAEK CIPVFL+E + QYYNGYCN
Sbjct: 35 VSALL-GLKEFETKWIGWPGVDVHDAIGKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCN 92
Query: 165 NILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM 224
NILWP+FHYLG P E R T ++QSQ+ AY KANQ+F DVV +HY++GDVVWCHDYH+M
Sbjct: 93 NILWPIFHYLGTPPEYRNDATITYQSQYEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVM 152
Query: 225 FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFV 284
LP+ LKEYNS MKVGWFLHTPFPSSE+++TLP GFHTYD+ARHF+
Sbjct: 153 LLPQYLKEYNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFL 212
Query: 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 344
+AC ILG E T EG+ DQG++TRVA FPIGI+ ERFI E++ V ++K+ + F GR
Sbjct: 213 NACMCILGVEATSEGIVDQGKVTRVAVFPIGIEPERFINTSELSEVVQYMKKFKNDFGGR 272
Query: 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVH 404
K++LGVDRLD IKGIPQK AFEKFLEEN++WRGKV+LLQIAVPTR + EYQ++ Q H
Sbjct: 273 KLILGVDRLDTIKGIPQKYQAFEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCH 332
Query: 405 EIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464
VGRINGRFG++++VPI HLD S+DF LCALYA+TDV LVTSLRDGMNLVS EF+ACQ
Sbjct: 333 YHVGRINGRFGSISSVPIIHLDCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQ 392
Query: 465 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524
+KGVLILSEFAGA QSLGAGAILVNPWNI EV++AI ALNMS EE+E++H NF +V
Sbjct: 393 KAEKGVLILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYV 452
Query: 525 TTHTAQEWAETFV---------SELNDTVVEAQLRIKQVPP-SLREADSIERYLRSNNRL 574
TH+ Q+WA+ F+ S+L + A+L L E D I++Y +SNNRL
Sbjct: 453 KTHSTQQWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELPEHDVIQQYSKSNNRL 512
Query: 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 634
LILGF TLT+P+ RRGD M L+LHP LK+ L LC DPKTT+VVLS S++ +L
Sbjct: 513 LILGFYGTLTQPMKNQERRGDG---MNLELHPQLKERLKELCSDPKTTVVVLSRSEKCIL 569
Query: 635 DKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ 694
DKNF EYN+WLAAENGMFLR T+G+W+T +PEH+N+EW+D +KHVF+YFTERTP S+ E
Sbjct: 570 DKNFGEYNMWLAAENGMFLRHTSGEWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLET 629
Query: 695 RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAI 754
E SLVWNY+ AD EFGR QARDMLQHLW GPISNASV+VV+G +SVEV AVGVTKG+A+
Sbjct: 630 SEASLVWNYENADAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAM 689
Query: 755 DRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 795
+RIL EIVH+K M T IDYVLCIG FLGKDEDVY FFEPEL
Sbjct: 690 ERILGEIVHNKSMATPIDYVLCIGCFLGKDEDVYTFFEPEL 730
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 284/700 (40%), Positives = 412/700 (58%)
Query: 80 NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGVKEFEAR------------------WIG 121
NE L+ T RL+VV+NRLPVS + ++ + W+G
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKSNFIWVG 61
Query: 122 WAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQ 178
W G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 62 WIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDY 120
Query: 179 EDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMK 238
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D +
Sbjct: 121 DDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDAR 171
Query: 239 VGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPE 298
+G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E P
Sbjct: 172 IGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN 231
Query: 299 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 358
GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKG
Sbjct: 232 GVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKG 291
Query: 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418
IPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++
Sbjct: 292 IPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIG 351
Query: 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG 478
PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF G
Sbjct: 352 YSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTG 411
Query: 479 AAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538
AAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W FV
Sbjct: 412 AAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVK 470
Query: 539 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIR 598
ELN + + + ++ Y +S RLLI ++ TL + P Q+
Sbjct: 471 ELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP-----QLS 523
Query: 599 EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTG 658
+L + L +DPKT + +LSG D+ L + F + L+AE G F +
Sbjct: 524 RPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPES 579
Query: 659 -KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 717
+W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR+
Sbjct: 580 TEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARE 638
Query: 718 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRI 757
+ HL P+ + G +S + + K D I
Sbjct: 639 LHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 764 (274.0 bits), Expect = 4.6e-124, Sum P(4) = 4.6e-124
Identities = 173/455 (38%), Positives = 262/455 (57%)
Query: 111 GVKEFEARWIGWAGVNVP-DEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILW 168
G + E ++G +P +E Q+ + + L E +C+P FL D+ +YY+G+C LW
Sbjct: 106 GDEAIEVIYVGCLKEEIPLNE--QEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLW 163
Query: 169 PLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFAD-VVNKHYKDGDVVWCHDYHLMFLP 227
PLFHY+ LP L R ++ + AY+ N++FAD ++ + D VW HDYHLM LP
Sbjct: 164 PLFHYM-LPLSPDLGG-RFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLP 221
Query: 228 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSAC 287
L++ + +K+G+FLH+PFPSSEI++TLP GFHT+DYARHF+S C
Sbjct: 222 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCC 281
Query: 288 TRILG--FEGTPE--GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA- 342
+R+LG +E G+E GR + P+GI + L + + + EL E +
Sbjct: 282 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGR 341
Query: 343 -GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 401
GR ++LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + +
Sbjct: 342 KGRTMLLGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQA 401
Query: 402 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 461
+ + V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++
Sbjct: 402 ETYSTVKRINETFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYI 461
Query: 462 ACQD----L------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARA 505
+ L KK +L++SEF G + SL +GAI VNPWN+ VA+A+ A
Sbjct: 462 VSRQGNEKLDKILKLEANNRNKKSMLVVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSA 520
Query: 506 LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540
L ++ E++ RH ++ +V+TH WA +F+ +L
Sbjct: 521 LEVAEPEKQLRHEKHYKYVSTHDVGYWARSFLQDL 555
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1100 (392.3 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 220/446 (49%), Positives = 299/446 (67%)
Query: 105 VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYC 163
V+A+ K + +W GW G+ +PD+ + + K L EK +P+FL ++I +YNG+
Sbjct: 48 VTALEGLKKTYTFKWFGWPGLEIPDD-EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFS 106
Query: 164 NNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL 223
N+ILWPLFHY P E ++ + AY +ANQ F + + K D++W HDYHL
Sbjct: 107 NSILWPLFHYH--PGEINFD-----ENAWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHL 159
Query: 224 MFLPKCLK-----EYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYD 278
M +P+ L+ + ++KVGWFLHTPFPSSEI+R LP GFHTYD
Sbjct: 160 MLVPEMLRVKIHEKQLQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYD 219
Query: 279 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 338
YARHF+S+ R+L P GVE QGR V AFPIGID ++F L+ VQ I++L+
Sbjct: 220 YARHFLSSVQRVLNVNTLPNGVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLK 279
Query: 339 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 398
ETF G K+++GVDRLD IKG+PQKL A E FL E+ +WRGKVVL+Q+AVP+R DV EYQ
Sbjct: 280 ETFKGCKIIVGVDRLDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQY 339
Query: 399 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 458
L S V+E+VGRING+FGT+ VPIH + +S+ F L +LYAV+DV LV+S RDGMNLVSY
Sbjct: 340 LRSVVNELVGRINGQFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSY 399
Query: 459 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 518
E++ACQ+ KKG LILSEF GAAQSL GAI+VNPWN ++++AI AL + P+ +++ +W
Sbjct: 400 EYIACQEEKKGSLILSEFTGAAQSLN-GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNW 457
Query: 519 HN-FTHVTTHTAQEWAETFVSELNDT 543
+ +++ +T+ W E FV EL T
Sbjct: 458 EKLYKYISKYTSAFWGENFVHELYST 483
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1088 (388.1 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
Identities = 217/428 (50%), Positives = 287/428 (67%)
Query: 118 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 177
+W GW G+ VPD + + E PVF+D+++ ++YNG+ N+ILWPLFHY P
Sbjct: 58 QWYGWPGLEVPDAEAGPVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--P 115
Query: 178 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD- 236
E +S ++AY + N++FA V K +DGD++W HDYHLM LP+ L+E D
Sbjct: 116 GEITFD-----ESAWSAYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDS 170
Query: 237 ---MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGF 293
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+S+C+RIL
Sbjct: 171 KKNVKIGFFLHTPFPSSEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSA 230
Query: 294 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 353
TP GV+ GR V AFPIGID E+F+ L+ VQ I L F G K+++GVDRL
Sbjct: 231 PTTPNGVQFAGRFVTVGAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRL 290
Query: 354 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 413
D IKG+PQKL A E FL E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+
Sbjct: 291 DYIKGVPQKLHALEVFLTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGK 350
Query: 414 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 473
FGT+ +PIH L +S+ F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+IL
Sbjct: 351 FGTIEFMPIHFLHQSVSFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMIL 410
Query: 474 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 533
SEF GAAQSL +G+++VNPWN E+ANAI A+ M PE+RE +V +T+ W
Sbjct: 411 SEFTGAAQSL-SGSLIVNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWG 469
Query: 534 ETFVSELN 541
+FV+ELN
Sbjct: 470 SSFVAELN 477
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1078 (384.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 217/444 (48%), Positives = 295/444 (66%)
Query: 118 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 177
+W GW G+ VP+E + E IPVF+D+++ ++YNG+ N+ILWPLFHY P
Sbjct: 56 QWYGWPGLEVPEEEIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--P 113
Query: 178 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS 235
E +S + AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+
Sbjct: 114 GEITFD-----ESAWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNT 168
Query: 236 --DMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGF 293
++K+G+FLHTPFPSSEI+R LP GFHTYDY RHF+SAC+R+LG
Sbjct: 169 KKNIKIGFFLHTPFPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGL 228
Query: 294 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 353
TP G+E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRL
Sbjct: 229 PTTPNGIEFQGKIIACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRL 288
Query: 354 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 413
D IKG+PQKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+
Sbjct: 289 DYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGK 348
Query: 414 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 473
FGT+ +PIH L +S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+L
Sbjct: 349 FGTVEFMPIHFLHKSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVL 408
Query: 474 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 533
SEFAGAAQSL G+I+VNPWN E+A A A+ MS E+R +V +T+ W
Sbjct: 409 SEFAGAAQSLN-GSIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWG 467
Query: 534 ETFVSELNDTVVEA--QLRIKQVP 555
++FV+EL +A +L K+ P
Sbjct: 468 QSFVTELTRISEQAAGKLPTKETP 491
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 219/451 (48%), Positives = 297/451 (65%)
Query: 105 VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCN 164
V+A++ K E +W GW G+ +P++ K + ++ C +FL + I +YNG+ N
Sbjct: 35 VTALQGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSN 94
Query: 165 NILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM 224
+ILWPLFHY P E ++ +AAYI+AN+ FA + K D D++W HDYHLM
Sbjct: 95 SILWPLFHYH--PGEMNFD-----ENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLM 147
Query: 225 FLPKCLKEY----NSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYA 280
LP+ L++ ++K+G+FLHTPFPSSEI+R LP GFHTYDYA
Sbjct: 148 LLPEMLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYA 207
Query: 281 RHFVSACTRILGFEGT-PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 339
RHF+S+ +RI+ T P G++ QGR + AFPIGID + FI L+ + V IK+L+
Sbjct: 208 RHFISSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKS 267
Query: 340 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 399
F KV++GVDRLD IKG+PQKL AFE FL EN +W GKVVL+Q+AVP+R DV EYQ L
Sbjct: 268 KFKDVKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSL 327
Query: 400 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459
S V E+VGRING FGT+ VPIH+L +S+ F L +LY ++DV LV+S RDGMNLVSYE
Sbjct: 328 RSTVSELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYE 387
Query: 460 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 519
++ACQ +KGVLILSEFAGAAQSL GA++VNPWN +++ AI +L + E+RE
Sbjct: 388 YIACQQDRKGVLILSEFAGAAQSLN-GALIVNPWNTEDLSEAIKESLTLPEEKREFNFKK 446
Query: 520 NFTHVTTHTAQEWAETFVSELNDTVVEAQLR 550
FT+++ +T+ W E+FV EL + LR
Sbjct: 447 LFTYISKYTSGFWGESFVKELYKCNPQKSLR 477
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 219/451 (48%), Positives = 297/451 (65%)
Query: 105 VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCN 164
V+A++ K E +W GW G+ +P++ K + ++ C +FL + I +YNG+ N
Sbjct: 35 VTALQGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSN 94
Query: 165 NILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM 224
+ILWPLFHY P E ++ +AAYI+AN+ FA + K D D++W HDYHLM
Sbjct: 95 SILWPLFHYH--PGEMNFD-----ENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLM 147
Query: 225 FLPKCLKEY----NSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYA 280
LP+ L++ ++K+G+FLHTPFPSSEI+R LP GFHTYDYA
Sbjct: 148 LLPEMLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYA 207
Query: 281 RHFVSACTRILGFEGT-PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 339
RHF+S+ +RI+ T P G++ QGR + AFPIGID + FI L+ + V IK+L+
Sbjct: 208 RHFISSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKS 267
Query: 340 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 399
F KV++GVDRLD IKG+PQKL AFE FL EN +W GKVVL+Q+AVP+R DV EYQ L
Sbjct: 268 KFKDVKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSL 327
Query: 400 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459
S V E+VGRING FGT+ VPIH+L +S+ F L +LY ++DV LV+S RDGMNLVSYE
Sbjct: 328 RSTVSELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYE 387
Query: 460 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 519
++ACQ +KGVLILSEFAGAAQSL GA++VNPWN +++ AI +L + E+RE
Sbjct: 388 YIACQQDRKGVLILSEFAGAAQSLN-GALIVNPWNTEDLSEAIKESLTLPEEKREFNFKK 446
Query: 520 NFTHVTTHTAQEWAETFVSELNDTVVEAQLR 550
FT+++ +T+ W E+FV EL + LR
Sbjct: 447 LFTYISKYTSGFWGESFVKELYKCNPQKSLR 477
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 218/441 (49%), Positives = 289/441 (65%)
Query: 105 VSAIRRGVKEFEA-RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYC 163
VSA+ G+K+ +W+GW G +P++ + + E IPVFLD++ ++YNG+
Sbjct: 50 VSALS-GLKKLMTFQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFS 108
Query: 164 NNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL 223
N+ILWPLFHY P E + + AY AN FA+ + K+ +DGD++W DYHL
Sbjct: 109 NSILWPLFHYH--PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHL 161
Query: 224 MFLPKCLKEYNSD----MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDY 279
M LP+ L+E D +K+G+FLHTPFPSSEI+R LP GFHTYDY
Sbjct: 162 MVLPQMLRELIGDKFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDY 221
Query: 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 339
ARHF+SAC+RIL P GVE G++ V FPIGID E+F AL+ + V+ I ++
Sbjct: 222 ARHFLSACSRILNLSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIER 281
Query: 340 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 399
G KV++GVDRLD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L
Sbjct: 282 RLQGVKVIVGVDRLDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNL 341
Query: 400 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459
+ V+E+VGRINGRFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE
Sbjct: 342 RAVVNELVGRINGRFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYE 401
Query: 460 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 519
++ Q + G LILSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE
Sbjct: 402 YICTQQERHGALILSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENK 460
Query: 520 NFTHVTTHTAQEWAETFVSEL 540
F +V +T+Q W ++FV EL
Sbjct: 461 LFRYVNKYTSQFWGQSFVGEL 481
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7629 | 0.9869 | 0.9617 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.15 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 918 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-179 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-142 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 7e-82 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 9e-81 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 6e-72 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 1e-25 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 8e-12 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-06 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 6e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1780 bits (4611), Expect = 0.0
Identities = 745/935 (79%), Positives = 812/935 (86%), Gaps = 28/935 (2%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRD 59
MPGN YN SS P RV RL+RE R+LRKS R+S+ ND D N G E FE++ RL +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSE 57
Query: 60 GDNLGPSIVDEDLEGPA--STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRR------- 110
GDN S V++ LEG A S +GCER +GR RQRLLVVANRLPVSA+RR
Sbjct: 58 GDNDSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSL 117
Query: 111 ------------GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQY 158
GVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQY
Sbjct: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQY 177
Query: 159 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 218
YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWC
Sbjct: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237
Query: 219 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYD 278
HDYHLMFLPKCLKEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYD
Sbjct: 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYD 297
Query: 279 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 338
YARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+
Sbjct: 298 YARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357
Query: 339 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 398
E FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+
Sbjct: 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417
Query: 399 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 458
LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSY
Sbjct: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477
Query: 459 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 518
EFVACQD KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH
Sbjct: 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 519 HNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILG 578
HNF HVTTHTAQEWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILG
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILG 597
Query: 579 FNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 638
FNATLTEPVDTPGRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+NF
Sbjct: 598 FNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657
Query: 639 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 698
E+++WLAAENGMFLR T G+WMTTMPEHLNM+WVDS+KHVFEYFTERTPRSHFE RETS
Sbjct: 658 GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717
Query: 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRIL 758
LVWNYKYADVEFGR+QARDMLQHLWTGPISNA+V+VVQGS+SVEVR VGVTKGAAIDRIL
Sbjct: 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRIL 777
Query: 759 AEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERR 818
EIVHSK M T IDYVLCIGHFLGKDED+Y FFEPELP D P I R+R D +K G+RR
Sbjct: 778 GEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRR 837
Query: 819 QALKV-ASRGSSKISQGKTQRPAQAPEKKTPNH--NCTNVRQPSSDKTSYNVLDLNKENY 875
+ K+ +SR +SK SQGK QR + K NH + + R+PS +K ++VLDL ENY
Sbjct: 838 PSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENY 897
Query: 876 FSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910
FSCAVGR R+NAR+LL SSD+VVSFLK+LA+ASSS
Sbjct: 898 FSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1326 bits (3432), Expect = 0.0
Identities = 546/837 (65%), Positives = 648/837 (77%), Gaps = 76/837 (9%)
Query: 93 RQRLLVVANRLPVSAIRR-------------------GVKEFEARWIGWAGVNVPDEIGQ 133
R RLLVVANRLPVSA R GVKEFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 134 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 193
ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+FHY+GLPQEDR TR+F+SQ+
Sbjct: 70 AALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 194 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 253
AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ LKEYN+ MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 254 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 313
+TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRILG EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 314 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 373
IGID ERFI E+ V+ H+KEL+ FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 374 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 433
+WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRINGRFG++++VPIHHLD S+DF
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 434 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 493
LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 494 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 553
NITEV++AI ALNMS EERE RH HNF +V TH+AQ+WA+ F+SELND +VEA+LR +
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 554 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 613
+P L E D I++Y +SNNRLLILGF TLTEP R QI+EM+L LHP+LK+ L
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 614 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 673
ALC DPKTT+VVLS S +++LDKNF EYN+WLAAENGMFLR T+G+W+TTMPEH+N++WV
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWV 602
Query: 674 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 733
D +K+VF+YFT+RTPRS+ E+ ETSLVWNY+YADVEFGR QARDMLQHLW GPISNASV+
Sbjct: 603 DGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVD 662
Query: 734 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793
VV+G KSVEV A+GVTKGAAI RIL EIVH+K M T ID+V C G+FL KDEDVY FFEP
Sbjct: 663 VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEP 722
Query: 794 ELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCT 853
E+ K + +
Sbjct: 723 EIL------------------------------------------------SKKKSSSSN 734
Query: 854 NVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910
K S N++DL ENYFSCA+G+ RT AR++L SS++VVS L KLA A+++
Sbjct: 735 YSDSDK--KVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 700 bits (1810), Expect = 0.0
Identities = 247/464 (53%), Positives = 305/464 (65%), Gaps = 24/464 (5%)
Query: 95 RLLVVANRLPVSAIRRG---------------VKEFEARWIGWAGVNVPDEIGQKALTKA 139
RL+VV+NRLPV R G +K W GW+G V ++ G+ L
Sbjct: 1 RLIVVSNRLPVPITRGGLEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTE 60
Query: 140 LAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKA 198
L K PVFL E+ V YYNG+ N+ LWPLFHY P R + AY +
Sbjct: 61 LEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWEAYRRV 113
Query: 199 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS 258
N++FA+ + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+RTLP
Sbjct: 114 NRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPW 173
Query: 259 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDS 318
R +LL +LA DLVGF TYD AR+F+SA +R LG E P GVE GR RV AFPIGID
Sbjct: 174 RRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDV 233
Query: 319 ERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 378
+RF + VQ I EL+E+ GRK+++GVDRLD KG+P++LLAFE+FLEE+ +WRG
Sbjct: 234 DRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRG 293
Query: 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438
KVVL+QIAVP+R DVPEYQ+L QV E+VGRINGRFGTL PI +L+RS D L ALY
Sbjct: 294 KVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALY 353
Query: 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEV 498
DV LVT LRDGMNLV+ E+VA QD K GVLILSEFAGAAQ L GA+LVNP++I +
Sbjct: 354 RAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPYDIDGM 412
Query: 499 ANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542
A+AIARAL M EERE+RH + + Q W E F+S+LN
Sbjct: 413 ADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 701 bits (1811), Expect = 0.0
Identities = 296/730 (40%), Positives = 424/730 (58%), Gaps = 62/730 (8%)
Query: 95 RLLVVANRLPVSAIRR---------------GVKEF----EARWIGWAGVNV---PDEIG 132
RL++V+NRLPV+ +R G++ F W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVTVVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQR 61
Query: 133 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLG--LPQEDRLATTRSFQS 190
+ + L E +PVFL + V +YY G+CN+ LWPLFHY EDR
Sbjct: 62 AR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF-------- 112
Query: 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 250
+ +Y + NQ FA+ + + GDVVW HDY LM LP L+E D ++G+FLH PFPS
Sbjct: 113 -WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSF 171
Query: 251 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 310
E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+LG+E + GR+ RV
Sbjct: 172 EVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231
Query: 311 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370
AFP+GID ++F + + VQ I+ L++ GRK++L +DRLD KGIP++LLAFE+FL
Sbjct: 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFL 291
Query: 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 430
E+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRING FGT+ PIH+ RSL
Sbjct: 292 EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLP 351
Query: 431 FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 490
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+LV
Sbjct: 352 FEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALLV 410
Query: 491 NPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 550
NP +I +A AI RAL M EE+ +R + + +WA F+ EL + + +
Sbjct: 411 NPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470
Query: 551 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLK 609
+ + I RY ++ RLL+L ++ TL P EL +L+
Sbjct: 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP----------ELAVPDKELR 520
Query: 610 QPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLN 669
L L DP T + ++SG DR+ L++ F + + L AE+G + R G+W + E +
Sbjct: 521 DLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ--LLEPVA 578
Query: 670 MEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 729
EW D+++ + E F +RTP S E++E SL W+Y+ AD E G +A +++ L + +SN
Sbjct: 579 TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSLLSN 637
Query: 730 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 789
A +EV++G+K VEVR GV KG A+ R+L D+VL IG DED++
Sbjct: 638 APLEVLRGNKVVEVRPAGVNKGRAVRRLLE--------AGPYDFVLAIGDDT-TDEDMFR 688
Query: 790 FFEPELPDDG 799
LP+
Sbjct: 689 ----ALPETA 694
|
Length = 726 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 690 bits (1783), Expect = 0.0
Identities = 268/474 (56%), Positives = 332/474 (70%), Gaps = 29/474 (6%)
Query: 94 QRLLVVANRLPVSAIRRG----------------------VKEFEARWIGWAGVNVPDEI 131
RL+VV+NRLPV+A R + E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 132 GQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 190
+ +++ L EK C+PVFLD++ V +YYNG+ N+ILWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 250
+ AY+K N++FAD + + YKDGD++W HDYHLM LP+ L++ D K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 251 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG-VEDQGRLTRV 309
EI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+LG E T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 310 AAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEK 368
AFPIGID R L+ VQ +KEL+E F +K++LGVDRLD IKGIPQKLLAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 428
FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VGRING FGTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 429 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 488
LDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 489 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542
LVNPW+I EVA AI AL MS EER+KRH F +++ H Q WAE+F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 637 bits (1646), Expect = 0.0
Identities = 242/468 (51%), Positives = 306/468 (65%), Gaps = 29/468 (6%)
Query: 95 RLLVVANRLPVSAIRRGVKEFEAR--------------------WIGWAGVNVPDEIGQK 134
RL+VV+NRLPVS R G EFEAR W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 135 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 194
T+ L E PVFL + YYNG+ N +LWPLFHY RL R + + A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 195 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 254
Y++ N+ FAD + + + GD+VW HDYHL+ LP+ L+E D ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 255 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 313
LP R +LLR +L ADL+GF T YAR+F+S C+R+LG E T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 314 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 373
IGID + F + VQ EL+E GRK+++GVDRLD KGIP++LLAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 374 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 433
+WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRING+FGTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 434 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 493
L ALY DVALVT LRDGMNLV+ E+VACQD GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 494 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541
+I EVA+AI RAL M EER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 527 bits (1360), Expect = e-179
Identities = 225/473 (47%), Positives = 293/473 (61%), Gaps = 34/473 (7%)
Query: 93 RQRLLVVANRLPVSAIRRG---------------------VKEFEARWIGWAGVNVPDEI 131
RL+VV+NRLPV G ++ WIGW+G P +
Sbjct: 14 DSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDE 73
Query: 132 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 190
L + + E PV L ++ YYNG+ N ILWPLFHY + +R +
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------N 125
Query: 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 250
+ AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+E D K+G+FLH PFPSS
Sbjct: 126 WWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 251 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED--QGRLTR 308
E+ R LP R ++L +L ADL+GF T YAR+F+ C+R+LG G + + GR+ +
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVK 245
Query: 309 VAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVMLGVDRLDMIKGIPQKLLAFE 367
V AFPIGID E F RAL+ VQ + EL E +K+++GVDRLD KGIPQ+LLAFE
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 427
+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VGRING FG+L+ P+H+L R
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 428 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGA 487
LD L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDA 424
Query: 488 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540
++VNPW+ EVA+AI RAL MS EER++RH V TH WA +F+ +L
Sbjct: 425 LIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 442 bits (1139), Expect = e-142
Identities = 270/775 (34%), Positives = 410/775 (52%), Gaps = 95/775 (12%)
Query: 83 CERLDGRTFSRQRLLVVANRLPVSAIRR------------------------GVKEFEAR 118
C + + R+++VAN+LP+ A R+ G E E
Sbjct: 49 CSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVI 108
Query: 119 WIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 176
++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LWPLFHY+ L
Sbjct: 109 YVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-L 165
Query: 177 PQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLMFLPKCLKE 232
P L R +S + AY+ N++FAD V+N + D VW HDYHLM LP L++
Sbjct: 166 PLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRK 221
Query: 233 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 292
+ +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLG 281
Query: 293 FEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKV 346
+ G+E GR + P+GI + L + + +KEL + F R +
Sbjct: 282 LSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIM 341
Query: 347 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEI 406
+LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + ++ H
Sbjct: 342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHST 401
Query: 407 VGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD- 465
V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++ +
Sbjct: 402 VKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461
Query: 466 --------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPE 511
KK +L++SEF G + SL +GAI VNPWNI VA+A+ AL M+
Sbjct: 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEP 520
Query: 512 EREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRIKQVPPSLR 559
E++ RH ++ +V+TH WA +F+ +L T + R+ + P+ R
Sbjct: 521 EKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFR 580
Query: 560 EADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 615
+ S+E Y R+ R ++L ++ TL + ++ LN L
Sbjct: 581 KL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI-----------LNTL 628
Query: 616 CHDPKTTIVVLSGSDRNVLDKNFQE-YNLWLAAENGMFLRCT-TGKWMTTMPEHLNMEWV 673
C D + ++S R L F L +AAE+G FLR +W T +P + W
Sbjct: 629 CRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV-ADCSWK 687
Query: 674 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 733
+ V + +TE T S E +ET+LVW Y+ AD +FG QA+++L HL ++N V
Sbjct: 688 QIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVT 746
Query: 734 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVY 788
V G VEV+ GV+KG R+L+ + ++ D+VLCIG DED++
Sbjct: 747 VKSGQNIVEVKPQGVSKGLVAKRLLSIM---QERGMLPDFVLCIGDDR-SDEDMF 797
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (696), Expect = 7e-82
Identities = 170/488 (34%), Positives = 246/488 (50%), Gaps = 48/488 (9%)
Query: 95 RLLVVANRLPV------SA------IRRGVKEFEARWIGWAGVNVPDEIG--QKALTKAL 140
RL+VV+NR+ SA I +K W GW+G E G + L K
Sbjct: 3 RLVVVSNRIAPPDEHKASAGGLAVGILGALKAAGGLWFGWSG-----ETGNEDQPLKKVK 57
Query: 141 AEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQSQFAAYIKA 198
F L E +YYN + N +LWP FHY L L Q R A + Y++
Sbjct: 58 KGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA--------WEGYLRV 109
Query: 199 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS 258
N + AD + KD D++W HDYHL+ L++ + ++G+FLH PFP+ EI LP
Sbjct: 110 NALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPP 169
Query: 259 RSDLLRAVLAADLVGFHTYDYARHF---VSACTRILGFEGTPEGVEDQGRLTRVAAFPIG 315
+LL + DL+GF T + F +S TR+ G + T V +PIG
Sbjct: 170 HDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEV--YPIG 227
Query: 316 IDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD 375
I+ + I P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 228 IEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ 286
Query: 376 WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALC 435
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D L
Sbjct: 287 HHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLM 346
Query: 436 ALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GVLILSEFAGAAQSLGAGAILVNPWN 494
++ +DV LVT LRDGMNLV+ E+VA QD GVL+LS+FAGAA L + A++VNP++
Sbjct: 347 KIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS-ALIVNPYD 405
Query: 495 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQV 554
EVA A+ RAL M ER RH + + W E F+S+L KQ+
Sbjct: 406 RDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL-----------KQI 454
Query: 555 PPSLREAD 562
P E+
Sbjct: 455 VPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 9e-81
Identities = 138/457 (30%), Positives = 221/457 (48%), Gaps = 45/457 (9%)
Query: 119 WIGWAGVNVPDEIGQKALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGL 176
W+ WA + + AE + + L ++ V +Y+ WP+ H
Sbjct: 44 WVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH---- 99
Query: 177 PQEDRLATTRSFQSQF-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKC 229
+F +F ++K N+ FA+ +G VW HDY+L +P
Sbjct: 100 ----------TFPERFQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGY 149
Query: 230 LKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 289
+++ D+K+ +F HTPFPS+++ LP R ++ ++L D +GFH Y +FV A
Sbjct: 150 IRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARG 209
Query: 290 ILGFEGTPEGVEDQ---------------------GRLTRVAAFPIGIDSERFIRALEIN 328
++ + D R+ ++ A P+G D ER AL
Sbjct: 210 LMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAA 269
Query: 329 PVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 388
++ ++ ++ AG K++L +R+D KGI +KL A+E+ LE + GKV L+ VP
Sbjct: 270 SIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329
Query: 389 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 448
+ + Y L Q+ + VGRINGRF + P+ RSL + + A +A+ DV +T
Sbjct: 330 AASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITP 389
Query: 449 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 508
LRDG+NLV+ E+VA Q L GVL+LSEFAGAA L GA+L NP++ + I AL M
Sbjct: 390 LRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAM 448
Query: 509 SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 545
E++ R F V + Q WA+ F++ ++
Sbjct: 449 PKAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 6e-72
Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 576 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 635
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 636 KNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQR 695
F NL LAAE+G F+R G+ T + E +++W + + E +TERTP S+ E +
Sbjct: 52 LFFGVPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDK 111
Query: 696 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAID 755
+++L W+Y+ AD +FG QA+++ +HL + V V QG K VEVR VGV+KG A +
Sbjct: 112 KSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAE 171
Query: 756 RILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELP 796
R+L E+ + D+ LCIG DED++ P
Sbjct: 172 RLLEELGSAGSP---PDFPLCIGDDRT-DEDMFDVVNPTKM 208
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 555 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 614
P+L+ +E YL + RLL L ++ TLTE V P E + L L
Sbjct: 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP--------EAAV-PDDRLLSLLQD 51
Query: 615 LCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD 674
L DP+ + ++SG L++ F + L AE+G +R GKW + E ++ W+
Sbjct: 52 LASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111
Query: 675 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV 734
+ + EY+ ERTP S+ E++ ++ +Y+ A+ + G A L I+ + V
Sbjct: 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRV 167
Query: 735 VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 789
G VE+R GV+KGAAI I+ E+ + + G L DED +A
Sbjct: 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDG------RFPIFAGDDL-TDEDAFA 215
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 8e-12
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629
+ R ++ TL+E V P + L L L P I ++SG
Sbjct: 1 ARKRAFFFDYDGTLSEIVPDPD---------AAVVSDRLLTILQKLAARPHNAIWIISGR 51
Query: 630 DRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR 689
+ L LA E+G ++ W + E T R P
Sbjct: 52 KFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 690 SHFEQRETSLVWNYKYADV-EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGV 748
E++ +L W+Y+ A V E R +A+++ + + + +EV+ G VE++ V
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELKEKILS----FTDLEVMDGKAVVELKPRFV 166
Query: 749 TKGAAIDRILAEIVHS 764
KG + R+L S
Sbjct: 167 NKGEIVKRLLWHQPGS 182
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-06
Identities = 72/312 (23%), Positives = 111/312 (35%), Gaps = 61/312 (19%)
Query: 214 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 273
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 274 FHTYD-------YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 326
D R + G ++T + P G+D+ERF A
Sbjct: 142 LRRADRIIAVSEATREELRE-----------LGGVPPEKITVI---PNGVDTERFRPAPR 187
Query: 327 INPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 386
++ I E V+L V RL KG+ L A K +E D R +V
Sbjct: 188 AARRRLGIPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV----- 236
Query: 387 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 446
D P + L + E+ + R + L ALYA DV ++
Sbjct: 237 ----GDGPLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVL 281
Query: 447 TSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 503
SL +G LV E +A G+ ++ S+ G + + G +LV P + +A AI
Sbjct: 282 PSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAIL 336
Query: 504 RALNMSPEEREK 515
R L+ PE R +
Sbjct: 337 RLLD-DPELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.6 bits (117), Expect = 4e-06
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 208 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 265
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 266 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 325
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 326 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 385
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 386 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 502
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 503 ARALNMSPEEREK 515
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 6e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 313 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 369
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 428
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 429 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 488
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 489 LVNPWNITEVANAIARALNMSPEEREK 515
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 252
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 253 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 311
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 312 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 361
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 422 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 480
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 481 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 533
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 534 ETFVS 538
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 918 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.94 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.93 | |
| PLN02316 | 1036 | synthase/transferase | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.93 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.93 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.92 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.92 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.92 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.91 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.91 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.91 | |
| PLN00142 | 815 | sucrose synthase | 99.9 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.9 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.9 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.89 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.89 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.89 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.88 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.88 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.88 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.88 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.88 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.87 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.87 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.87 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.87 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.86 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.86 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.86 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.86 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.86 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.85 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.85 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.85 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.85 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.85 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.85 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.85 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.84 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.84 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.84 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.84 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.84 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.84 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.84 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.84 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.83 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.83 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.83 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.83 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.83 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.83 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.82 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.82 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.82 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.81 | |
| PLN02887 | 580 | hydrolase family protein | 99.81 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.81 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.81 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.8 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.8 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.8 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.8 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.8 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.8 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.79 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.78 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.78 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.77 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.77 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.76 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.76 | |
| PLN02423 | 245 | phosphomannomutase | 99.76 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.76 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.75 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.75 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.74 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.74 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.71 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.7 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.69 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.69 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.68 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.67 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.67 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.65 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.59 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.58 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.54 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.49 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.43 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.38 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.32 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.3 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.29 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.26 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.22 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.18 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.18 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.16 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.15 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.15 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.11 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.01 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.0 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.0 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.99 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.9 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.89 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.51 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.48 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.43 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.39 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.38 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.23 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.18 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.16 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.07 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.92 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 97.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.81 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.68 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.67 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.5 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.37 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.27 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.25 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.89 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 96.88 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.57 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.51 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.47 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.36 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.31 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.15 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.1 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.1 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.07 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 96.02 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.78 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.74 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.57 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.43 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.41 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.36 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.27 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 94.91 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.81 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 94.79 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 94.78 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 94.74 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.58 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 94.28 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 94.28 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.19 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.04 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.97 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.96 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.87 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.8 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.64 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 93.58 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.51 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 93.34 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 93.33 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.33 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 93.02 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 92.94 | |
| PRK06769 | 173 | hypothetical protein; Validated | 92.92 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 92.82 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.79 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 92.65 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 92.35 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.29 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 92.21 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 91.96 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.8 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 91.77 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.76 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 91.74 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 91.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.63 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.19 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 91.18 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 90.35 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 90.27 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.98 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 89.75 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 89.74 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 89.34 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 89.2 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 89.1 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 89.06 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 88.84 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.4 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 88.06 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 87.74 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 86.99 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.95 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.73 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 86.49 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 85.48 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.38 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 85.22 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 85.11 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 85.02 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 84.46 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 84.25 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 84.07 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.99 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 83.97 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 83.35 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 83.35 | |
| PRK08238 | 479 | hypothetical protein; Validated | 83.21 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 82.65 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 82.65 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 82.16 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 81.64 | |
| PLN02940 | 382 | riboflavin kinase | 81.47 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 80.79 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 80.74 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 80.46 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.29 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-187 Score=1679.88 Aligned_cols=906 Identities=82% Similarity=1.273 Sum_probs=838.9
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccchhhhhccCCCCCCCccccccCCCCC--
Q 002468 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (918)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (918)
||||+|+|++...+++|++||+|+ ||||+.+++++.++..+ +.+.++.++++...|.++.++..+++.++|.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999988889999999999 99999999998776666 888899999999999999999999999999844
Q ss_pred CCCCCccccCCCCCCCCcEEEEEccCccccccc------------c-------cccCCcEEEEeCCCCCCCchhhHHHHH
Q 002468 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRR------------G-------VKEFEARWIGWAGVNVPDEIGQKALTK 138 (918)
Q Consensus 78 ~~~~~~~~~~~~~~~~~rlivvsnrlP~~~~~~------------~-------l~~~~~~Wvgw~g~~~~~~~~~~~~~~ 138 (918)
...+||++++++..-++||||||||||+++++. | ++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 367899999986544789999999999987542 1 356789999999987776555666777
Q ss_pred hhcCccEEEEecChHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEE
Q 002468 139 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 218 (918)
Q Consensus 139 ~~~~~~~~pV~l~~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwv 218 (918)
.+.+|+|+||||+++++++||+||||++|||+|||++..++++.+..+.++.+|++|++||++||++|+++++++|+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 78899999999999999999999999999999999865544443333334456999999999999999999999999999
Q ss_pred eCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC
Q 002468 219 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 298 (918)
Q Consensus 219 HDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~ 298 (918)
||||||+||++||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccC
Q 002468 299 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 378 (918)
Q Consensus 299 ~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~ 378 (918)
+++++||.++|.++|+|||++.|...+..+++++++++++++++++++||+|||||+.|||+++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHH
Q 002468 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 458 (918)
Q Consensus 379 kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~l 458 (918)
+|+||||++|+|+++++|++|++++.++|++||++||+.+|+||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 459 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 459 EamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
||||||.+++|+||+|||+|++++||.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|++.|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcC
Q 002468 539 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 618 (918)
Q Consensus 539 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d 618 (918)
+|.++..++..+..++.+.|+.+.++++|+++++++|||||||||++++++|..+.+++.++.+.++++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998776666666667889999999999999999999999999999999996556666666788999999999999999
Q ss_pred CCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccce
Q 002468 619 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 698 (918)
Q Consensus 619 ~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~s 698 (918)
++|.|+|+|||++++|++||+.++++++|+||++++..++.|...+++..+..|++.+..+|++|++++||++||+|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987889985443555779999999999999999999999999999
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 699 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
++||||.+||+++..|+++++++|+...+.+.+++|+.|+++|||+|.|+|||.|+++||+++..++.+..++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999965566667899999999999999999999999999998753332224689999999
Q ss_pred cCCCC-cHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhh-hccCCcccccCCCCCCCCCCCCCCCCC--CCCC
Q 002468 779 HFLGK-DEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-ASRGSSKISQGKTQRPAQAPEKKTPNH--NCTN 854 (918)
Q Consensus 779 D~d~n-DedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 854 (918)
| |.+ |||||+++...+|..+.+++|++..++.++|.++++..+. .++++++++|.++|++.++..++..+| ..|+
T Consensus 798 D-d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (934)
T PLN03064 798 H-FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGS 876 (934)
T ss_pred C-CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCc
Confidence 9 875 9999999999999999999999999999999999998887 779999999999999999999999888 5788
Q ss_pred CCCCCCCccccccccCCCCceEEEEECCCCCccceecCCHHHHHHHHHHHHhhcCc
Q 002468 855 VRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 910 (918)
.+++.++..+|+++|++++|||||+||+|+|+|+|+|++++||+.||+.|+++++.
T Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 877 DRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 88889999999999999999999999999999999999999999999999988754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-155 Score=1415.09 Aligned_cols=727 Identities=37% Similarity=0.682 Sum_probs=649.9
Q ss_pred CCcEEEEEccCccccccc--c--------------------c--ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEE
Q 002468 93 RQRLLVVANRLPVSAIRR--G--------------------V--KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 148 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~--~--------------------l--~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 148 (918)
+.||||||||||+++++. | + ...+++||||+|..++.+++......++.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 579999999999988752 1 2 236789999999877654444333556788999999
Q ss_pred ecChHhHHHhHHHHHHHhhHhhhcCCC-CCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCC-CCEEEEeCCccch
Q 002468 149 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 225 (918)
Q Consensus 149 ~l~~~~~~~~y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~-~DiIwvHDyhL~l 225 (918)
||+++++++||+||||++|||+|||+. ..+. ....|++. |++|++||++||++|++++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999994 3221 11247764 999999999999999999998 6999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC----Ccee
Q 002468 226 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 301 (918)
Q Consensus 226 lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~----~~i~ 301 (918)
+|.+||+++|+++||||||||||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998764 3578
Q ss_pred eCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc--CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCc
Q 002468 302 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 379 (918)
Q Consensus 302 ~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~k 379 (918)
|+||.++|.++|+|||++.|...+..+++.+++++++++++ ++++|++|||||+.|||.++|+||++||++||+|++|
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999996 6999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHH
Q 002468 380 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459 (918)
Q Consensus 380 v~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lE 459 (918)
|+||||++|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+|+||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 460 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 460 amA~~~~---------------~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
|+|||.+ ++|+||+|||+||+++| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHHhh-hcc---------cc-----CCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCC
Q 002468 525 TTHTAQEWAETFVSELNDTVVEAQ-LRI---------KQ-----VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 589 (918)
Q Consensus 525 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~---------~~-----~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 589 (918)
.+||+.+|+++||.+|.++++.+. .+. +. .+++|+++.++++|+++++|+|||||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999876531 111 11 15788999999999999999999999999998742
Q ss_pred CCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc-CceEEeeCceEEEecCC-eeeeecccc
Q 002468 590 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 667 (918)
Q Consensus 590 p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l-~l~liaenGa~i~~~~~-~w~~~~~~~ 667 (918)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 145788999999999999999999999999999999999987 69999999999996554 786544 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 002468 668 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 747 (918)
Q Consensus 668 ~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~g 747 (918)
.+..|++.+..+++.|++++||+++|.|+++++||||.+|++++..+++++..++ ...+.+..+.+..|+++|||+|+|
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4568999999999999999999999999999999999999999988999999988 666666678899999999999999
Q ss_pred CCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccC
Q 002468 748 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRG 827 (918)
Q Consensus 748 vnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (918)
+|||.|+++|++.+...+ +++|+++|||| |.|||+||++++....
T Consensus 761 vnKG~Al~~Ll~~~~~~g---~~~d~vl~~GD-D~nDedMF~~~~~~~~------------------------------- 805 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERG---MLPDFVLCIGD-DRSDEDMFEVITSSMA------------------------------- 805 (854)
T ss_pred CCHHHHHHHHHHHHHhcC---CCcccEEEEcC-CccHHHHHHHhhhhcc-------------------------------
Confidence 999999999987643211 56899999999 9999999999963100
Q ss_pred CcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEECCCCCccceecCCHHHHHHHHHHHHhh
Q 002468 828 SSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADA 907 (918)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~ 907 (918)
|..- ....++|||+||.++|.|+|||+|++||++||+.|++.
T Consensus 806 -------------------------g~~~-------------~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~ 847 (854)
T PLN02205 806 -------------------------GPSI-------------APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASV 847 (854)
T ss_pred -------------------------CCcc-------------cccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhc
Confidence 0000 01136899999999999999999999999999999987
Q ss_pred cCc
Q 002468 908 SSS 910 (918)
Q Consensus 908 ~~~ 910 (918)
+.+
T Consensus 848 ~~~ 850 (854)
T PLN02205 848 SEQ 850 (854)
T ss_pred chh
Confidence 654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-153 Score=1395.87 Aligned_cols=760 Identities=71% Similarity=1.182 Sum_probs=665.1
Q ss_pred CCcEEEEEccCccccccc------------c-------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecChH
Q 002468 93 RQRLLVVANRLPVSAIRR------------G-------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 153 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~------------~-------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 153 (918)
++||||||||||++++++ | ++..+++||||+|..+++++++..+...+.+++|+|||| ++
T Consensus 10 ~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~ 88 (797)
T PLN03063 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NE 88 (797)
T ss_pred CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HH
Confidence 799999999999977642 1 355689999999986655445555667778999999999 99
Q ss_pred hHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh
Q 002468 154 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 233 (918)
Q Consensus 154 ~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~ 233 (918)
++++||+||||++|||+|||++.++.+..+..+.++..|++|++||++||++|+++++++|+|||||||||+||++||++
T Consensus 89 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~ 168 (797)
T PLN03063 89 VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEY 168 (797)
T ss_pred HHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHh
Confidence 99999999999999999999843322221222234556999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEee
Q 002468 234 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 313 (918)
Q Consensus 234 ~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P 313 (918)
.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+++++++....++.++|+.++|.++|
T Consensus 169 ~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP 248 (797)
T PLN03063 169 NNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248 (797)
T ss_pred CCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred CCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCCh
Q 002468 314 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 393 (918)
Q Consensus 314 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~ 393 (918)
+|||++.|.+....+++++....+++.++++++|++|||||+.||++++|+||++|++++|+++++++||||++|+|+++
T Consensus 249 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~ 328 (797)
T PLN03063 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDV 328 (797)
T ss_pred cccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCch
Confidence 99999999988777777777888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEE
Q 002468 394 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 473 (918)
Q Consensus 394 ~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIl 473 (918)
++|++|++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..++|++|+
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred eCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhcccc
Q 002468 474 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 553 (918)
Q Consensus 474 Se~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~ 553 (918)
|||+|+++.+|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||++|.+++..+......
T Consensus 409 Se~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~ 488 (797)
T PLN03063 409 SEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488 (797)
T ss_pred eCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccC
Confidence 99999999997799999999999999999999999999999999999999999999999999999999988765555555
Q ss_pred CCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 002468 554 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 633 (918)
Q Consensus 554 ~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 633 (918)
.++.|+.+.++++|++|++++|||||||||++..++|.. .+.+.++++++++|++|+++++|.|+|+|||+++.
T Consensus 489 ~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~ 562 (797)
T PLN03063 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK------EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI 562 (797)
T ss_pred CCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 668899999999999999999999999999988654310 04577999999999999999999999999999999
Q ss_pred HHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHH
Q 002468 634 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI 713 (918)
Q Consensus 634 L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~ 713 (918)
|++||+.++++++|+||++++..++.|....++..+..|++.+..+|++|++++||++||+|+++++||||.+||+++..
T Consensus 563 L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~ 642 (797)
T PLN03063 563 LDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRA 642 (797)
T ss_pred HHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHH
Confidence 99999998999999999999977788976543445678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 714 QARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 714 ~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
++++++++|.+..+.+.+++|+.|+++|||+|.|+|||.|+++|++++...+....++|||+|+|| |. +||+||+++.
T Consensus 643 ~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdmF~~l~ 721 (797)
T PLN03063 643 QARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDVYTFFE 721 (797)
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHHHHhcc
Confidence 999999998444555668999999999999999999999999999987311111135799999999 74 6999999996
Q ss_pred cCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q 002468 793 PELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNK 872 (918)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (918)
....+. ..+.++. .+..+++.+ .| ....+.
T Consensus 722 ~~~~~~----------------------------~~~~~~~------~~~~~~~~~---------------~~-~~~~~~ 751 (797)
T PLN03063 722 PEILSK----------------------------KKSSSSN------YSDSDKKVS---------------SN-LVDLKG 751 (797)
T ss_pred cccccc----------------------------ccccccc------ccccccccc---------------cc-cccccc
Confidence 421000 0000000 000000000 00 011234
Q ss_pred CceEEEEECCCCCccceecCCHHHHHHHHHHHHhhcCc
Q 002468 873 ENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 873 ~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 910 (918)
+++|+|+||.++|.|+|||+|++||+++|+.|++..+.
T Consensus 752 ~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 752 ENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred CceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 57999999999999999999999999999999986543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-140 Score=1280.95 Aligned_cols=703 Identities=43% Similarity=0.763 Sum_probs=645.0
Q ss_pred CcEEEEEccCccccccc----------c---------cccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCccEEEEecCh
Q 002468 94 QRLLVVANRLPVSAIRR----------G---------VKEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLDE 152 (918)
Q Consensus 94 ~rlivvsnrlP~~~~~~----------~---------l~~~~~~Wvgw~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~~ 152 (918)
+||||||||+|++++++ | ++..+++||||+|...+.. ..+..+...+.+|+|+||||++
T Consensus 1 ~~livvsnr~p~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 80 (726)
T PRK14501 1 SRLIIVSNRLPVTVVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLSA 80 (726)
T ss_pred CCEEEEEcCCCcceeecCCceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCCH
Confidence 48999999999977542 1 3678999999999765542 2233345667899999999999
Q ss_pred HhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHH
Q 002468 153 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 231 (918)
Q Consensus 153 ~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr 231 (918)
+++++||+||||++|||+|||++... .|++. |++|++||++||++|++.++++|+|||||||||++|++||
T Consensus 81 ~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~lr 152 (726)
T PRK14501 81 EEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLR 152 (726)
T ss_pred HHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHHH
Confidence 99999999999999999999996433 36654 9999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEE
Q 002468 232 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 311 (918)
Q Consensus 232 ~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v 311 (918)
++.|+++||||+|+|||++++|++||+|++||+|||+||+|||||++|++||+++|.++++++.....++++|+.++|.+
T Consensus 153 ~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v 232 (726)
T PRK14501 153 ERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDA 232 (726)
T ss_pred hhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999998877778999999999999
Q ss_pred eeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC
Q 002468 312 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 391 (918)
Q Consensus 312 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~ 391 (918)
+|+|||++.|.+....+++.+..+++|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|+|.
T Consensus 233 ~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~ 312 (726)
T PRK14501 233 FPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRT 312 (726)
T ss_pred EECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCc
Confidence 99999999999988777777788888888889999999999999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceE
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 471 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~l 471 (918)
++++|++|++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++||||||.+++|++
T Consensus 313 ~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~ 392 (726)
T PRK14501 313 GVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVL 392 (726)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred EEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhcc
Q 002468 472 ILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRI 551 (918)
Q Consensus 472 IlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~ 551 (918)
|+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+|++.|++++++++.+||+.+|+++|++.+.+++..+....
T Consensus 393 vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~ 471 (726)
T PRK14501 393 ILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFA 471 (726)
T ss_pred EEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccc
Confidence 999999999998 6799999999999999999999999999999999999999999999999999999999876543332
Q ss_pred ccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 552 KQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 552 ~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
....+.|+.+.++++|+++++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||++
T Consensus 472 ~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 472 SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 333577899999999999999999999999999987666 45678999999999999989999999999999
Q ss_pred hhHHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhh
Q 002468 632 NVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFG 711 (918)
Q Consensus 632 ~~L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~ 711 (918)
..++++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+.++++++
T Consensus 543 ~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~ 620 (726)
T PRK14501 543 DTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELG 620 (726)
T ss_pred HHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHH
Confidence 999999998899999999999997778887544 236789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 712 RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 712 ~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|++++++. .++++++|||| |.|||+||+++
T Consensus 621 ~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~~ 690 (726)
T PRK14501 621 EARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRAL 690 (726)
T ss_pred HHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHhc
Confidence 88888998888 6666667888999999999999999999999999983 45899999999 99999999987
Q ss_pred CcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCC
Q 002468 792 EPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLN 871 (918)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (918)
..
T Consensus 691 ~~------------------------------------------------------------------------------ 692 (726)
T PRK14501 691 PE------------------------------------------------------------------------------ 692 (726)
T ss_pred cc------------------------------------------------------------------------------
Confidence 32
Q ss_pred CCceEEEEECCCCCccceecCCHHHHHHHHHHHHh
Q 002468 872 KENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLAD 906 (918)
Q Consensus 872 ~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~ 906 (918)
.+|+|+||.++|.|+|+|++++||..+|+.|++
T Consensus 693 --~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 --TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred --CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 369999999999999999999999999999974
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-118 Score=1060.19 Aligned_cols=703 Identities=46% Similarity=0.810 Sum_probs=646.4
Q ss_pred CCcEEEEEccCccccccc-c--------------------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecC
Q 002468 93 RQRLLVVANRLPVSAIRR-G--------------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 151 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~-~--------------------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 151 (918)
+.|+|+||||||+.+.+. + .++.+..||||.|..++++++.......+..++|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 579999999999987321 1 1445689999999888877777777788899999999999
Q ss_pred hHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHH
Q 002468 152 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 230 (918)
Q Consensus 152 ~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~l 230 (918)
++....+|++||+++|||+|||+..+.+... . .|.. .|++|+.+|+.||+++++.++++|+|||||||||++|+++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999943322211 1 2343 5999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccC----CCceeeCCee
Q 002468 231 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 306 (918)
Q Consensus 231 r~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~----~~~i~~~g~~ 306 (918)
|+...+++||||+|.|||++|+|+++|.|++|+.+|++||+||||+++|++||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 386 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig 386 (918)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||++||++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCC
Q 002468 387 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 387 ~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||++++++++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002468 467 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 546 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 546 (918)
+.+++|+|+|+|+++.++.++++|||||.+++|.+|..+|+|+.+|+..|+..++.++..|+...|+..|+..+++.+..
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999999988887
Q ss_pred hhhccccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEE
Q 002468 547 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 626 (918)
Q Consensus 547 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~Iv 626 (918)
..+. ..+.+.|..+.+++.|++|++|+|++|||||+.+.. | ..+...|+.||+||+|.|+|+
T Consensus 479 ~~~~-~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GFLG-FRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--S---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cccc-cccccccChhHhhhhhhhccceEEEecccccccCCC--C---------------chHHHHHHHHhcCCCCeEEEE
Confidence 6633 344466899999999999999999999998888652 2 119999999999999999999
Q ss_pred cCCChhhHHHHhccc-CceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeec
Q 002468 627 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 705 (918)
Q Consensus 627 SGR~~~~L~~~~~~l-~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ 705 (918)
|||++..++.|+... ++|++||||++++.+++ |.+.+ .+++|++.+.++|++|++|||||++|.|+.+++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998877 89999999999998766 98766 57899999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcH
Q 002468 706 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 785 (918)
Q Consensus 706 ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDe 785 (918)
+|++++..||+++.++| .. .+.++.++.|+..|||+|.|++||.|+.+++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67899999999999999999999999999999986 47899999999 99999
Q ss_pred HHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 002468 786 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 865 (918)
Q Consensus 786 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (918)
+||+++.....+.
T Consensus 687 d~~~~~~~~~~~~------------------------------------------------------------------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDPE------------------------------------------------------------------- 699 (732)
T ss_pred HHHHHHhhccCCc-------------------------------------------------------------------
Confidence 9999996632100
Q ss_pred ccccCCCCceEEEEECCCCCccceecCCHHHHHHHHH
Q 002468 866 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 902 (918)
Q Consensus 866 ~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~ 902 (918)
+ -++.|+|+||.++|.|+|++.++.||+.+|+
T Consensus 700 ~-----~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 K-----VEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred c-----cceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 0 0368999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-113 Score=976.10 Aligned_cols=440 Identities=35% Similarity=0.629 Sum_probs=406.4
Q ss_pred CcEEEEEccCcccccc----cc--------cccCCcEEEEeCCCCCCCchhhHHHHHh-hcCccEEEEecChHhHHHhHH
Q 002468 94 QRLLVVANRLPVSAIR----RG--------VKEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDEDIVHQYYN 160 (918)
Q Consensus 94 ~rlivvsnrlP~~~~~----~~--------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~~~~~~~y~ 160 (918)
+||||||||+|+.... .| ++..+|+||||+|....++ ..+... ..++.|.||+|+++++++||+
T Consensus 2 ~rLivVSNRlp~~~~~~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~---~~~~~~~~~~~~~~~v~L~~~~~~~yY~ 78 (474)
T PRK10117 2 SRLVVVSNRIAPPDEHKASAGGLAVGILGALKAAGGLWFGWSGETGNED---QPLKKVKKGNITWASFNLSEQDYDEYYN 78 (474)
T ss_pred CCEEEEECCCcCCCCCCcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc---ccchhhhcCCceEEEecCCHHHHHHHHh
Confidence 6899999999975422 12 4778999999999753321 112233 256899999999999999999
Q ss_pred HHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeE
Q 002468 161 GYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKV 239 (918)
Q Consensus 161 gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I 239 (918)
||||++|||+|||++... .|+. .|++|++||++||++|++.+++||+|||||||||++|++||+++|+++|
T Consensus 79 gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR~~~~~~~I 150 (474)
T PRK10117 79 QFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRI 150 (474)
T ss_pred hhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHHHhCCCCcE
Confidence 999999999999995432 3665 4999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEEeeCCcCh
Q 002468 240 GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAFPIGIDS 318 (918)
Q Consensus 240 ~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~-~~i~~~g~~~~v~v~P~GID~ 318 (918)
|||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++... ..+.++|+.++|.++|+|||+
T Consensus 151 gFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~ 230 (474)
T PRK10117 151 GFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEP 230 (474)
T ss_pred EEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcH
Confidence 9999999999999999999999999999999999999999999999999999987643 457788999999999999999
Q ss_pred hhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHH
Q 002468 319 ERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 398 (918)
Q Consensus 319 ~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~ 398 (918)
+.|...+..+ +...++++++.++++++|++||||||+|||+++|+||++||++||+|++||+|+||++|+|+++++|++
T Consensus 231 ~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~ 309 (474)
T PRK10117 231 DEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQD 309 (474)
T ss_pred HHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHH
Confidence 9999887755 466788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcC-CCCceEEEeCCC
Q 002468 399 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFA 477 (918)
Q Consensus 399 l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~-~~~g~lIlSe~a 477 (918)
|+++|+++|++||++||+.+|+||+|+++.+++++|.|||++|||+++||++||||||++||+|||. +++|+||+|||+
T Consensus 310 l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefA 389 (474)
T PRK10117 310 IRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA 389 (474)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEeccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 788999999999
Q ss_pred CchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002468 478 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 546 (918)
Q Consensus 478 G~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 546 (918)
|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||++|..+...
T Consensus 390 GaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 390 GAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred chHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 999999 78999999999999999999999999999999999999999999999999999999987543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-109 Score=956.42 Aligned_cols=435 Identities=32% Similarity=0.625 Sum_probs=402.1
Q ss_pred EEccCccccccc--c--------------------c-ccCCcEEEEeCCCCCCCchh-hHHHH-HhhcCccEEEEecChH
Q 002468 99 VANRLPVSAIRR--G--------------------V-KEFEARWIGWAGVNVPDEIG-QKALT-KALAEKRCIPVFLDED 153 (918)
Q Consensus 99 vsnrlP~~~~~~--~--------------------l-~~~~~~Wvgw~g~~~~~~~~-~~~~~-~~~~~~~~~pV~l~~~ 153 (918)
||||||++++++ | + +..+|+||||+|...++++. ...+. ....+++|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999887652 1 3 34679999999975322111 11111 2235699999999999
Q ss_pred hHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHh
Q 002468 154 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 232 (918)
Q Consensus 154 ~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~ 232 (918)
++++||+||||++|||+|||++... .|+.. |++|++||++||++|+++++++|+|||||||||++|++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999996433 46654 99999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC--------------
Q 002468 233 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 298 (918)
Q Consensus 233 ~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~-------------- 298 (918)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 299 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 299 -------~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
++.++||.++|.++|+|||++.|.+....+++.+.++++|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778999999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 451 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~E 451 (918)
+||+++++|+|||||.|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.+||++||||++||+||
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 002468 452 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 531 (918)
Q Consensus 452 G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 531 (918)
|||||++||||||.+++||||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002468 532 WAETFVSELND 542 (918)
Q Consensus 532 W~~~fl~~l~~ 542 (918)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998865
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-110 Score=963.19 Aligned_cols=443 Identities=54% Similarity=0.944 Sum_probs=342.2
Q ss_pred cEEEEEccCccccccc---c--------------------cccCCcEEEEeCCCCCCCch--hhHHHHHhhcCccEEEEe
Q 002468 95 RLLVVANRLPVSAIRR---G--------------------VKEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 149 (918)
Q Consensus 95 rlivvsnrlP~~~~~~---~--------------------l~~~~~~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 149 (918)
||||||||||++++++ | ++..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 7999999999997653 1 25589999999998766544 222233566899999999
Q ss_pred cChHhHHHhHHHHHHHhhHhhhcCCCC-CcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHH
Q 002468 150 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 227 (918)
Q Consensus 150 l~~~~~~~~y~gf~n~~LWPlfH~~~~-~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 227 (918)
|+++++++||+||||++|||+|||+.. .+ + ...|+. .|++|++||+.||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~----~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-D----LARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-c----cchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999843 11 0 123555 4999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC--ceeeCCe
Q 002468 228 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 305 (918)
Q Consensus 228 ~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~--~i~~~g~ 305 (918)
++||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... .++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987655 7999999
Q ss_pred eeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 306 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 306 ~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|++|||+|++|||+++|+||++||++||+|+++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhc
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~ 464 (918)
|+.|+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 465 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 465 ~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|++.||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999966789999999999999999999999999999999999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-107 Score=918.08 Aligned_cols=444 Identities=50% Similarity=0.890 Sum_probs=410.7
Q ss_pred CCCCCcEEEEEccCccccccc-------------c--------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEE
Q 002468 90 TFSRQRLLVVANRLPVSAIRR-------------G--------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 148 (918)
Q Consensus 90 ~~~~~rlivvsnrlP~~~~~~-------------~--------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 148 (918)
++..+|+||||||+|++..+. | ++..+++||||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 445689999999999986411 1 2667999999999877522223344555568999999
Q ss_pred ecChHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHH
Q 002468 149 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 227 (918)
Q Consensus 149 ~l~~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 227 (918)
+|+.+++++||++|||++|||+|||+.... .|+++ |+.|++||++||++|++.+++||+||||||||+|+|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995432 46665 999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee---eCC
Q 002468 228 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 304 (918)
Q Consensus 228 ~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~---~~g 304 (918)
+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++... ...++ ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-DADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-cccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998652 22233 447
Q ss_pred eeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEE
Q 002468 305 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 383 (918)
Q Consensus 305 ~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lv 383 (918)
+.++|.++|+|||+..|......+.++.++.++++.+.+ +++|++||||||+||++++|+||++||++||+|++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999999888888888999988876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHh
Q 002468 384 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463 (918)
Q Consensus 384 qig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~ 463 (918)
||+.|||+++++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++|||+++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 464 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 464 ~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
|.+++|+||+|||+|++.+| .+|++|||||.+++|+||.+||+|+.+||++|++.+++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-102 Score=897.09 Aligned_cols=438 Identities=56% Similarity=0.930 Sum_probs=408.7
Q ss_pred cEEEEEccCccccccc------c---------cccCCcEEEEeCCCCCCCchhhHHH-HHhhcCccEEEEecChHhHHHh
Q 002468 95 RLLVVANRLPVSAIRR------G---------VKEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDEDIVHQY 158 (918)
Q Consensus 95 rlivvsnrlP~~~~~~------~---------l~~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~~~~~~ 158 (918)
||||||||+|+.+.++ | ++..+++||||+|...++++++..+ .....+++|+||||+++++++|
T Consensus 1 ~livvsnr~p~~~~~~~~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 80 (456)
T TIGR02400 1 RLIVVSNRLPVPITRGGLEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGY 80 (456)
T ss_pred CEEEEECCCCccccCCCCCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHHHHHHH
Confidence 6999999999987653 2 3667999999999865533322223 3445789999999999999999
Q ss_pred HHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCC
Q 002468 159 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 237 (918)
Q Consensus 159 y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~ 237 (918)
|+||||++|||+|||++... .|+.. |++|++||++||++|.+.++++|+|||||||||++|++||++.|++
T Consensus 81 y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~ 152 (456)
T TIGR02400 81 YNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQN 152 (456)
T ss_pred HHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHhhCCCC
Confidence 99999999999999996432 46654 9999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcC
Q 002468 238 KVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGID 317 (918)
Q Consensus 238 ~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID 317 (918)
+||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++|+|||
T Consensus 153 ~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID 232 (456)
T TIGR02400 153 KIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGID 232 (456)
T ss_pred eEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCC
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred hhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHH
Q 002468 318 SERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 397 (918)
Q Consensus 318 ~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~ 397 (918)
++.|.+....+++.+..+.+|++++++++|++||||++.||++.+|+||++|++++|+++++++|+||++|+|+++++|+
T Consensus 233 ~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~ 312 (456)
T TIGR02400 233 VDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQ 312 (456)
T ss_pred HHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHH
Confidence 99999887777788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC
Q 002468 398 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 477 (918)
Q Consensus 398 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a 477 (918)
+|++++++++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+..++|+||+|+++
T Consensus 313 ~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~ 392 (456)
T TIGR02400 313 QLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFA 392 (456)
T ss_pred HHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997667889999999
Q ss_pred CchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 478 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 478 G~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 393 G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 393 GAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 999999 599999999999999999999999999999999999999999999999999998874
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=814.49 Aligned_cols=437 Identities=54% Similarity=0.926 Sum_probs=404.0
Q ss_pred cEEEEEccCcccccccc--------------------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecChHh
Q 002468 95 RLLVVANRLPVSAIRRG--------------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 154 (918)
Q Consensus 95 rlivvsnrlP~~~~~~~--------------------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 154 (918)
||||||||+|+++++++ ++..+++||||+|...+.+++.......+.+|+|+||||++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 69999999999887521 3667999999999877654443355667789999999999999
Q ss_pred HHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh
Q 002468 155 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 233 (918)
Q Consensus 155 ~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~ 233 (918)
++.||+||||++|||+|||++... .|++ .|++|++||+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999995432 3555 4999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEEe
Q 002468 234 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 312 (918)
Q Consensus 234 ~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~-~~i~~~g~~~~v~v~ 312 (918)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987654 678899999999999
Q ss_pred eCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCC
Q 002468 313 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 392 (918)
Q Consensus 313 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~ 392 (918)
|+|||++.|.+....++..+.+++++..++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998776666666666677777889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEE
Q 002468 393 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 472 (918)
Q Consensus 393 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lI 472 (918)
+++|+++++++++++++||.+||..+|.||+++.|.++.+++.++|++|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 002468 473 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 473 lSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 540 (918)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|+++|++.+++++++++.+||+..|++.|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999876
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=345.00 Aligned_cols=253 Identities=30% Similarity=0.453 Sum_probs=218.4
Q ss_pred CchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 558 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 558 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
+....+.+.|.++++++||+||||||+++..+| ....++++++++|++|+++++|.|+|+|||+..+++.+
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 455677888999999999999999999999999 67889999999999999999999999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHH
Q 002468 638 FQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 717 (918)
Q Consensus 638 ~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 717 (918)
++..++++||+||++++..++.|.....+..++.|++.+.++++++++++||+++|.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99669999999999997555554333335567889999999999999999999999999999999999977666555544
Q ss_pred HHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCC
Q 002468 718 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPD 797 (918)
Q Consensus 718 l~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~ 797 (918)
..... .. ...++++.|+++||++|.++|||.++++++++.++ ..++++|.|| |.|||+||++++..
T Consensus 155 ~~~~~-~~---~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~F~~v~~~--- 220 (266)
T COG1877 155 EAATL-IN---ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDAFAAVNKL--- 220 (266)
T ss_pred HHHhc-cc---cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHHHHhhccC---
Confidence 43333 11 11289999999999999999999999999999873 2368999999 99999999999651
Q ss_pred CCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEE
Q 002468 798 DGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFS 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 877 (918)
..++
T Consensus 221 ----------------------------------------------------------------------------~~~~ 224 (266)
T COG1877 221 ----------------------------------------------------------------------------DSIT 224 (266)
T ss_pred ----------------------------------------------------------------------------CCce
Confidence 2689
Q ss_pred EEECCCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 878 CAVGRPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 878 ~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
|+||.+.|+|+|++.++..+..+|.+++....
T Consensus 225 v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 225 VKVGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred EEecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999977643
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=352.67 Aligned_cols=246 Identities=20% Similarity=0.329 Sum_probs=198.2
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCce
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 644 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~ 644 (918)
-...++++++|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..++++++..+++
T Consensus 91 ~~~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~ 159 (354)
T PLN02151 91 LHKSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELY 159 (354)
T ss_pred HHhhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccce
Confidence 33456788999999999999999999 577999999999999996 5689999999999999999977899
Q ss_pred EEeeCceEEEec--CCeeee----eccccCChHHHHHHHHHHHHH---HhcCCCceeeeccceEEEEeeccChhhhHHHH
Q 002468 645 LAAENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQA 715 (918)
Q Consensus 645 liaenGa~i~~~--~~~w~~----~~~~~~~~~w~~~v~~il~~~---~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 715 (918)
++|+||++++.. +..|.. .. ......|.+.+.++++.+ +.++||+++|+|+++++||||+++++..
T Consensus 160 laGsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~---- 234 (354)
T PLN02151 160 YAGSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW---- 234 (354)
T ss_pred EEEeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----
Confidence 999999999843 224531 11 123456887777766655 5789999999999999999999976522
Q ss_pred HHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 716 RDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 716 ~el~~~L~~~~~~~~-~l~v~~G~~~vEI~p~-gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.++.+++ ..++.+. .+.++.|++++||+|. ++|||.|++.|++.+++.+ ...++++|||| |.|||+||++++.
T Consensus 235 ~~l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDaF~~L~~ 309 (354)
T PLN02151 235 SDLANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDAFKILRD 309 (354)
T ss_pred HHHHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHHHHHHhh
Confidence 2333444 3333333 4899999999999994 9999999999999988643 23468999999 9999999999954
Q ss_pred CCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCC
Q 002468 794 ELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKE 873 (918)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (918)
. .
T Consensus 310 ~------------------------------------------------------------------------------~ 311 (354)
T PLN02151 310 K------------------------------------------------------------------------------K 311 (354)
T ss_pred c------------------------------------------------------------------------------C
Confidence 1 1
Q ss_pred ceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 874 NYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 874 ~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
++++|+|| .++|.|+|+|+||+||.+||+.|+....
T Consensus 312 ~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 312 QGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred CCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 35777787 6899999999999999999999987543
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=349.57 Aligned_cols=252 Identities=19% Similarity=0.310 Sum_probs=200.2
Q ss_pred CchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 558 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 558 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
|+.-+-+.++.+.++.+||+||||||+|++++| ..+.++++++++|++|++ +..|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 333344555667788999999999999999888 456899999999999994 689999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeee-------eccccCChHHHHHHHHH---HHHHHhcCCCceeeeccceEEEEeeccC
Q 002468 638 FQEYNLWLAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYAD 707 (918)
Q Consensus 638 ~~~l~l~liaenGa~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---l~~~~~~~~Gs~iE~K~~sl~~hyr~ad 707 (918)
++..++++||+||++++.+++.|.. .. ......|++.+.++ ++.+++++||++||+|+++++||||+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad 244 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVD 244 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCC
Confidence 7666789999999999854433321 00 01223466655555 5667889999999999999999999997
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcH
Q 002468 708 VEFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 785 (918)
Q Consensus 708 ~e~~~~~a~el~~~L~~~~~~~~-~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDe 785 (918)
++.. .++..++ ..++.++ .+.++.|++++||+| .++|||.|+++||+.+++++ ...++++|||| |.|||
T Consensus 245 ~~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDE 315 (366)
T PLN03017 245 EKKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDE 315 (366)
T ss_pred HHHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccH
Confidence 7542 2333333 3333333 489999999999999 59999999999999998643 23578999999 99999
Q ss_pred HHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 002468 786 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 865 (918)
Q Consensus 786 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (918)
+||+.++..
T Consensus 316 DaF~~L~~~----------------------------------------------------------------------- 324 (366)
T PLN03017 316 DAFKMLRDR----------------------------------------------------------------------- 324 (366)
T ss_pred HHHHHHhhc-----------------------------------------------------------------------
Confidence 999999541
Q ss_pred ccccCCCCceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhc
Q 002468 866 NVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 908 (918)
Q Consensus 866 ~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~ 908 (918)
..+|+|+|| .++|.|+|+|.||+||..||+.|++..
T Consensus 325 -------~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 -------GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred -------CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998764
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=349.99 Aligned_cols=247 Identities=20% Similarity=0.303 Sum_probs=199.4
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+.+|.++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++..|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999999 6889999999999999985 57999999999999999998899
Q ss_pred eEEeeCceEEEecC-----Ceeeeecc-----------ccCChHHHHHHHHHHHH---HHhcCCCceeeeccceEEEEee
Q 002468 644 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 704 (918)
Q Consensus 644 ~liaenGa~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~il~~---~~~~~~Gs~iE~K~~sl~~hyr 704 (918)
+++|+||++++... ..|..... ......|.+.+.++++. ++.++||+++|+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999997421 11211100 01134677555555544 6677899999999999999999
Q ss_pred ccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCCCCCCCc--eEEEEecCC
Q 002468 705 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAID--YVLCIGHFL 781 (918)
Q Consensus 705 ~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~~~~~~~~~~d--~vlaiGD~d 781 (918)
++++++...++..+...+ .. ...+.++.|++++||+| .++|||.||++|++++++.. .+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~-----~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSN-----CDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCc-----ccceeEEEECC-C
Confidence 998877666666666555 22 12488999999999999 59999999999999998531 23 3599999 9
Q ss_pred CCcHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002468 782 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSD 861 (918)
Q Consensus 782 ~nDedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (918)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998541
Q ss_pred ccccccccCCCCceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 862 KTSYNVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 862 ~~~~~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
..+++|+|| .+.|.|+|+|+||+||.+||+.|+....
T Consensus 343 -----------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 343 -----------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred -----------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 025777776 5899999999999999999999988653
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=343.95 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=146.9
Q ss_pred EEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002468 576 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 655 (918)
Q Consensus 576 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~ 655 (918)
||||||||++++++| ..+.++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999988 68899999999999999999999999999999997776666689999999999997
Q ss_pred cCC-eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 002468 656 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 733 (918)
Q Consensus 656 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~l~ 733 (918)
+++ .|.... ......|++.+.++++.+++++||+++|+|+++++||||+++++++..++.++.+++ ...+.. .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 665 455322 345678999999999999999999999999999999999999998888888888888 443333 4899
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 734 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 734 v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.|+++|||+|.+++||.|+++|++.++..+ .+++++||+|| |.|||+||++++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~---~~~~~~l~~GD-D~tDE~~f~~~~~ 205 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAG---PKPDFVLYIGD-DRTDEDAFRALRE 205 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTT
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCccc---cccceeEEecC-CCCCHHHHHHHHh
Confidence 99999999999999999999999999987431 34789999999 9999999999976
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=357.67 Aligned_cols=528 Identities=14% Similarity=0.164 Sum_probs=333.9
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh-----------------cCCChHHH-HHHHHhCCEEeE
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 274 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr-----------------~lP~~~~l-l~~ll~aDlIgf 274 (918)
.|+||.|+++--.++..|++.. ++|.+++.|.- ..+-++ .++.|-++ -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999998888888888765 78899999963 111111 01222222 123668999999
Q ss_pred eCHHHHHHHHHHH-------HHHhccccCCCceeeCCe-eeEEEEeeCCcChhhhhhhhcCCchH-------------HH
Q 002468 275 HTYDYARHFVSAC-------TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 333 (918)
Q Consensus 275 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~i~~~g~-~~~v~v~P~GID~~~f~~~~~~~~~~-------------~~ 333 (918)
.|..........- .|.|.. ....++..+|+ ..++.|+|+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 9988776533210 011100 00123333332 23899999999999999753211100 01
Q ss_pred HHHHHHHh--cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 002468 334 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 407 (918)
Q Consensus 334 ~~~lr~~~--~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y----~~l~~~l~~lv 407 (918)
...+++.+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12333333 57789999999999999999999999886543221 2443 345321 11111 12234555666
Q ss_pred HhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc
Q 002468 408 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 483 (918)
Q Consensus 408 ~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l 483 (918)
.+++. .+ .|. |.|+++.+++..+|+.| ||||+||++||||||++|||||+ .|+|+|..+|..+.+
T Consensus 542 ~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 55432 12 354 67999999999999988 69999999999999999999995 899999999999987
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHh-hhcccc------C
Q 002468 484 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA-QLRIKQ------V 554 (918)
Q Consensus 484 --g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~-~~~~~~------~ 554 (918)
|.+|++|+|.|++++|++|.++|+.+ +.++++..+.++.+..|+|..-++.++..+......+ +.+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 5667777888888999999999999998887654321 000000 0
Q ss_pred ---CC-------------------------------CCc-------hHHHHHHHH----------------------hcC
Q 002468 555 ---PP-------------------------------SLR-------EADSIERYL----------------------RSN 571 (918)
Q Consensus 555 ---~~-------------------------------~l~-------~~~~~~~y~----------------------~s~ 571 (918)
.+ .++ +...+.... .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 00 001 011111111 112
Q ss_pred CeEEE--EecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhh---cCCCCcEEEEcCCChhhHHHHhcccC----
Q 002468 572 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 642 (918)
Q Consensus 572 ~rLI~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~---~d~g~~V~IvSGR~~~~L~~~~~~l~---- 642 (918)
+++|+ +|+|.| +.. .+.+.++++.+. ......++++|||++..+.+.+...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 322 123334444443 22346788999999999999887653
Q ss_pred --ceEEeeCceEEEecC------Ceeeeec--cccCChHH-HHHHHHHHHHHHhcC--------CCceeeeccce--EEE
Q 002468 643 --LWLAAENGMFLRCTT------GKWMTTM--PEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 701 (918)
Q Consensus 643 --l~liaenGa~i~~~~------~~w~~~~--~~~~~~~w-~~~v~~il~~~~~~~--------~Gs~iE~K~~s--l~~ 701 (918)
..+||.-|..|+..+ ..|..-. ..+.+..| .+.+.+.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 368999999998641 2222100 01234566 345665555544321 33444443333 333
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceE-EEEe
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 778 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~--G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~v-laiG 778 (918)
-|.-.+++.. ...+++.+.|... ...+.++. +...++|.|...+||.||++|+.+++ ++.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431222211 1234555555222 22344443 35799999999999999999999998 678888 5599
Q ss_pred cCCCC-c-HHHHHHc
Q 002468 779 HFLGK-D-EDVYAFF 791 (918)
Q Consensus 779 D~d~n-D-edMf~~~ 791 (918)
| ..| | |+|+.-+
T Consensus 981 d-SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGL 994 (1050)
T ss_pred c-CCCCCHHHHhCCc
Confidence 9 888 9 6665443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=321.47 Aligned_cols=238 Identities=24% Similarity=0.365 Sum_probs=202.5
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeC
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 649 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaen 649 (918)
|++++|||||||||++..++| ....++++++++|++|++++++.|+|+|||+..++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 56789999999999999999999999999999998877655579999999
Q ss_pred ceEEEecCC--eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeecc-ChhhhHHHHHHHHHHHhcCC
Q 002468 650 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 726 (918)
Q Consensus 650 Ga~i~~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~a-d~e~~~~~a~el~~~L~~~~ 726 (918)
|++++.++. .|.... .....|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNLT--EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeech--hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 244321 12257888899999998887 9999999999999999999 7888888888887776 2
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCC
Q 002468 727 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTR 806 (918)
Q Consensus 727 ~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~ 806 (918)
...++.++.|+.++|++|.++|||.++++++++++ ...++++|||| +.||++||+.++...
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~----------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQW----------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhccc-----------
Confidence 23478899999999999999999999999999987 45689999999 999999999994310
Q ss_pred CCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEE--CCCC
Q 002468 807 PTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV--GRPR 884 (918)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~V--G~~~ 884 (918)
...++++|+| |.+.
T Consensus 207 ----------------------------------------------------------------~~~g~~~v~v~~g~~~ 222 (244)
T TIGR00685 207 ----------------------------------------------------------------GNYGFYPVPIGSGSKK 222 (244)
T ss_pred ----------------------------------------------------------------CCCCeEEEEEecCCcC
Confidence 0025799999 8889
Q ss_pred CccceecCCHHHHHHHHHHHH
Q 002468 885 TNARFLLQSSDEVVSFLKKLA 905 (918)
Q Consensus 885 s~A~y~l~~~~eV~~~L~~L~ 905 (918)
|.|.|+++++++|.++|+.|+
T Consensus 223 ~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 223 TVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCceEeCCCHHHHHHHHHHHh
Confidence 999999999999999999986
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=324.21 Aligned_cols=236 Identities=22% Similarity=0.241 Sum_probs=197.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCce
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 651 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa 651 (918)
+++||+||||||++.+.+| ....++++++++|++|++++++.|+|+|||++..+.++++.+++.++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999998888 5678999999999999987899999999999999999999888889999999
Q ss_pred EEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCC
Q 002468 652 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 731 (918)
Q Consensus 652 ~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~ 731 (918)
+++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||+.++.+ .....++.+.+ ...+. .
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~--~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP--Q 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--c
Confidence 99854444432 12455677777788888888999999999999999999877422 11223343344 22221 3
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCCCCCCc
Q 002468 732 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAI 811 (918)
Q Consensus 732 l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~~~~~~ 811 (918)
+.+..|+.++||+|+++|||.||++++++++ +..++++|||| +.||++||++++..
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~----------------- 212 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRL----------------- 212 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhc-----------------
Confidence 6678899999999999999999999999998 45789999999 99999999999541
Q ss_pred CCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEECCCCCccceec
Q 002468 812 KVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLL 891 (918)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l 891 (918)
++++|+||.+.|.|+|+|
T Consensus 213 --------------------------------------------------------------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 213 --------------------------------------------------------------GGISVKVGTGATQASWRL 230 (266)
T ss_pred --------------------------------------------------------------CCeEEEECCCCCcCeEeC
Confidence 469999999999999999
Q ss_pred CCHHHHHHHHHHHHhhcCc
Q 002468 892 QSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 892 ~~~~eV~~~L~~L~~~~~~ 910 (918)
++|++|.+||+.|+...+.
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999987663
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=247.41 Aligned_cols=272 Identities=19% Similarity=0.230 Sum_probs=203.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +. +..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~-------------~~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-EL-------------LDKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hH-------------hccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445667888999999999987631 11 1246777776653 333332 11
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
+ ...++.++|+|||.+.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~-----~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP-----Q---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc-----h---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578899999998886431 1 1233334 26789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++.+++|++ .|+++|.+......+...+.+++.+++.+++. .|+ |.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 58888865432222334556677777666532 254 57899999999999999999999
Q ss_pred CCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 002468 448 SLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 523 (918)
Q Consensus 448 Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~al-lVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~ 523 (918)
|.+ ||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++|+++. +.++.++.++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 975 99999999999994 899999999998887 56787 6789999999999999999763 45667777766
Q ss_pred H-HhcCHHHHHHHHHHHHHH
Q 002468 524 V-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 524 v-~~~~~~~W~~~fl~~l~~ 542 (918)
+ +.+++..-++.|++.|+.
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 5 778999888888887764
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-24 Score=258.28 Aligned_cols=320 Identities=16% Similarity=0.196 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHh-h----CCCCeEEEEEcCC-----CCChhhh-hcCCCh--
Q 002468 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-Y----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR-- 259 (918)
Q Consensus 193 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~-~----~~~~~I~~flH~P-----fPs~e~f-r~lP~~-- 259 (918)
.-|.-+.++.++.+...-...||||+||||..++|.++++ . +.++++.|++|.- ||...+. ..+|+.
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 3343344444444443323579999999999998555443 2 3567899999975 3322211 112211
Q ss_pred -------------HH-HHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhh
Q 002468 260 -------------SD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 325 (918)
Q Consensus 260 -------------~~-ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~ 325 (918)
-- +..++..||.|..-++.|++.... ..-.|++. .+..+..++.+||||||++.|.|..
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPat 743 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPST 743 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCcc
Confidence 11 224677899999999999887654 11111111 0123456788999999999998753
Q ss_pred cC--------Cch---HHHHHHHHHHhc------CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcC
Q 002468 326 EI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 388 (918)
Q Consensus 326 ~~--------~~~---~~~~~~lr~~~~------~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~p 388 (918)
.. ... ......++++++ +.++|++||||++.||+..+++|+..+++ ++ +.||++|.
T Consensus 744 D~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd- 816 (977)
T PLN02939 744 DRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS- 816 (977)
T ss_pred ccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC-
Confidence 21 000 011345677763 35899999999999999999999998875 22 55777764
Q ss_pred CCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCC
Q 002468 389 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 468 (918)
Q Consensus 389 sr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~ 468 (918)
++. ..+++++++++.+++.. ..|. |.+.++......+|+.||+||+||.+|||||+.+|||+|+
T Consensus 817 ----Gp~-~~~e~eL~~La~~l~l~------drV~-FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG---- 880 (977)
T PLN02939 817 ----SPV-PHIQREFEGIADQFQSN------NNIR-LILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG---- 880 (977)
T ss_pred ----CCc-HHHHHHHHHHHHHcCCC------CeEE-EEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC----
Confidence 221 13456666777665321 1355 4577887778899999999999999999999999999994
Q ss_pred ceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 002468 469 GVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 469 g~lIlSe~aG~~~~l-----------g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W~~ 534 (918)
.|+|++..+|+.+.+ |.+|++|+|.|+++++++|.+++. ..++.+..+..+. ....++|...++
T Consensus 881 tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~ 958 (977)
T PLN02939 881 SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSAS 958 (977)
T ss_pred CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHHH
Confidence 799999999998866 247999999999999999999986 2344444444432 336788988888
Q ss_pred HHHHHHHHhH
Q 002468 535 TFVSELNDTV 544 (918)
Q Consensus 535 ~fl~~l~~~~ 544 (918)
.++.-...+.
T Consensus 959 qYeeLY~~ll 968 (977)
T PLN02939 959 QYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH
Confidence 8877665543
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-25 Score=248.15 Aligned_cols=300 Identities=23% Similarity=0.203 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCC
Q 002468 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 270 (918)
Q Consensus 191 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aD 270 (918)
.+..|...++.++.++.. ..+.|+||+|+++.+.++...+. ...|+.++.|+++.... .. ....+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~~--~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLL-DLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--RR--VWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhccccc-cCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--HH--HHHHHHHHHHhCC
Confidence 467787777777665322 22579999999998777665543 36788889999875321 00 1122333445678
Q ss_pred EEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEE
Q 002468 271 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 347 (918)
Q Consensus 271 lIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vI 347 (918)
.+.+.+.++++.+ + . ..++ ++|+|||+......... ......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 8777663322111 0 1 1234 89999997542211111 12233455555 377899
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCC
Q 002468 348 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 427 (918)
Q Consensus 348 l~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 427 (918)
++|||+++.||+..+|+||+.+.+++|++ .|+++|.+... .+++.++.+++ ....+. . ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~-~~~~~~~~~~~---~~~~~~----~--~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATD-DPEGWIVYEEV---LEYAEG----D--PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCC-CchhHHHHHHH---HHHhCC----C--CCeEEEec
Confidence 99999999999999999999998887764 58878764321 12233322232 222211 1 13555433
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 002468 428 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 504 (918)
Q Consensus 428 ~-v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~ 504 (918)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 2 489999999999999999999999999999999995 899999999999888 567898874 5688999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 505 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 505 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
++++ ++++.++.++.++++ ..+++...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457778888888877 579999999988877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=251.14 Aligned_cols=295 Identities=23% Similarity=0.286 Sum_probs=201.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhC----CCCeEEEEEcCCCC----ChhhhhcC--CC-------------hHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFP----SSEIHRTL--PS-------------RSDLLRAVLA 268 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~----~~~~I~~flH~PfP----s~e~fr~l--P~-------------~~~ll~~ll~ 268 (918)
..|+||+||||.-++|.++++.. .+.|+.++.|..-. +.+.+..+ |+ ..-+..++..
T Consensus 118 ~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 118 RPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 67999999999999999998653 46899999998621 11111111 10 1112335677
Q ss_pred CCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhhcCC-----------chHHHHH
Q 002468 269 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-----------PVQVHIK 335 (918)
Q Consensus 269 aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~~~~-----------~~~~~~~ 335 (918)
||.|...++.+++..... ..| .++. +..+..++.++|||||++.|.+..... .-.+..+
T Consensus 198 ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 269 (466)
T PRK00654 198 ADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKR 269 (466)
T ss_pred cCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHH
Confidence 888888887776553320 000 0000 111345788999999999987642100 0011234
Q ss_pred HHHHHhc----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhh
Q 002468 336 ELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 411 (918)
Q Consensus 336 ~lr~~~~----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN 411 (918)
.++++++ +.++|++|||+++.||++.+++|+++++++ ++.|+++|.+ + + .+++++++++.+.+
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~---~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P---ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---HHHHHHHHHHHHCC
Confidence 5666663 567999999999999999999999998753 2557777642 1 1 24556666766543
Q ss_pred cccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c-----
Q 002468 412 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 484 (918)
Q Consensus 412 ~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g----- 484 (918)
. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.+|+.+.+ +
T Consensus 337 ~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~ 403 (466)
T PRK00654 337 G--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDG 403 (466)
T ss_pred C--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCC
Confidence 2 24444554 66667899999999999999999999999999994 799999999999988 4
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 485 -AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 485 -~~allVnP~D~~~lA~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
.+|++|+|.|++++|++|.++|.. .++.++++..+.+ ...+++..-++.+++-..+
T Consensus 404 ~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 404 EATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 569999999999999999999863 2223333333332 2567777777776655544
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-24 Score=260.28 Aligned_cols=309 Identities=15% Similarity=0.116 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh-----CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHH
Q 002468 192 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 266 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~-----~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~l 266 (918)
..-|..+++..++.+.+.-...||||+||+|..++|.++++. ..++++.+++|..-. ....+-.++
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~l 759 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKAM 759 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHHH
Confidence 444444555555555444346799999999999999999874 356899999996421 112244567
Q ss_pred HhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC--C-----c----h-HHHH
Q 002468 267 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVHI 334 (918)
Q Consensus 267 l~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~--~-----~----~-~~~~ 334 (918)
..||.|..-++.|++..... .. ...+..++.+||+|||++.|.+.... | + . ....
T Consensus 760 ~~AD~ViTVS~tya~EI~~~----~~---------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k 826 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN----SA---------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAK 826 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc----cC---------cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhH
Confidence 88999999999887765430 00 01134578899999999988764210 0 0 0 1123
Q ss_pred HHHHHHhc----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhh
Q 002468 335 KELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 410 (918)
Q Consensus 335 ~~lr~~~~----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~I 410 (918)
..++++++ +.++|++||||.+.||+..+++|+..+++. .+.||++|.+ |+ ..++.++++++.++
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~------~~qlVIvG~G-----pd-~~~e~~l~~La~~L 894 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER------NGQVVLLGSA-----PD-PRIQNDFVNLANQL 894 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc------CcEEEEEeCC-----CC-HHHHHHHHHHHHHh
Confidence 34666663 568999999999999999999999998863 2457766642 22 23566777787776
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c----
Q 002468 411 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---- 484 (918)
Q Consensus 411 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g---- 484 (918)
+..+. ..|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|+ .|+|++..+|..+.+ +
T Consensus 895 g~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~ 965 (1036)
T PLN02316 895 HSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDK 965 (1036)
T ss_pred CccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccccc
Confidence 54332 12443 345554444589999999999999999999999999994 699999999999987 2
Q ss_pred ---------CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 002468 485 ---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 485 ---------~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..++|..=++.++.-...+
T Consensus 966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999865333333344444444 5588888888887665544
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=249.84 Aligned_cols=312 Identities=15% Similarity=0.173 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChh--hhh------------cCCChHH-
Q 002468 197 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD- 261 (918)
Q Consensus 197 ~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e--~fr------------~lP~~~~- 261 (918)
.+...+...+.+.....|+|++|+++..++..++++.. +.|+.++.|....... +.. .++.+-.
T Consensus 99 ~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T TIGR02472 99 ELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEA 177 (439)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHH
Confidence 33444444443333346999999987767777776644 6789999997532110 000 0011100
Q ss_pred HHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh
Q 002468 262 LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF 341 (918)
Q Consensus 262 ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~ 341 (918)
....+..+|.|...+...+...+. ...+. ...++.++|+|||++.|.+....+......+.+++..
T Consensus 178 ~~~~~~~ad~ii~~s~~~~~~~~~---~~~~~-----------~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 178 EEETLAHASLVITSTHQEIEEQYA---LYDSY-----------QPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH---hccCC-----------CccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 112344677776666543222110 00011 2357889999999999976432221111111222211
Q ss_pred --cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHH----HHHHHHHHHHHhhhcccC
Q 002468 342 --AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGRFG 415 (918)
Q Consensus 342 --~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~----~l~~~l~~lv~~IN~~~g 415 (918)
+++++|++|||+++.||+..+|+||..+.+..+.. ++++ ++|.. .+.+.++ ++.+++.+++.+++
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~~~~---- 314 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCR--DDIRKMESQQREVLQKVLLLIDRYD---- 314 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCc--cccccccHHHHHHHHHHHHHHHHcC----
Confidence 46789999999999999999999998653211111 2332 23321 1111111 22333445555432
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 002468 416 TLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 489 (918)
Q Consensus 416 ~~~~~pV~~~~g~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~all 489 (918)
..+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|+.+.+ |.+|++
T Consensus 315 l~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~l 387 (439)
T TIGR02472 315 LYG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNGLL 387 (439)
T ss_pred CCc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEE
Confidence 222 244 67899999999999988 99999999999999999999995 899999999999888 467999
Q ss_pred ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 490 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 490 VnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
|+|.|++++|++|.++++++ ++++.+.++.++++ ..+++..-++.+++-|
T Consensus 388 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 388 VDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred eCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999865 57777888888877 5678777777776543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-24 Score=248.43 Aligned_cols=311 Identities=22% Similarity=0.278 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCC--CCeEEEEEcCCCC----Chhhhhc--CCCh-------
Q 002468 195 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR------- 259 (918)
Q Consensus 195 Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~--~~~I~~flH~PfP----s~e~fr~--lP~~------- 259 (918)
+..+++..++.+...-...|+||+||+|..++|.++++... ++|+.++.|...+ +.+.+.. +|+.
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33344444444443333679999999999999999988654 3899999998642 1222222 1211
Q ss_pred ------HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhhcCC---
Q 002468 260 ------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 328 (918)
Q Consensus 260 ------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~~~~--- 328 (918)
..+..++..||.|...++.|++..... ..+. ++. +..+..++.++|||||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~-----~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY-----GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc-----cchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 012335667888888887776654321 0010 000 011345788999999999987642110
Q ss_pred --------chHHHHHHHHHHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHH
Q 002468 329 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 395 (918)
Q Consensus 329 --------~~~~~~~~lr~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~ 395 (918)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ + +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D-P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-H-
Confidence 00112334666663 5789999999999999999999999987542 567777642 1 2
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC
Q 002468 396 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 475 (918)
Q Consensus 396 y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe 475 (918)
.+++++++++.+.+. .+.+ .+.++.+++..+|+.||++|+||.+||||++.+|||+|+ .|+|+|.
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 345566666654321 2443 345688888999999999999999999999999999994 7999999
Q ss_pred CCCchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 476 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 476 ~aG~~~~l--g------~~allVnP~D~~~lA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
.+|..+.+ | .+|++|+|.|++++|++|.++|.+ .++.++++.++.+ .+.+++..-++.+++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999988 4 679999999999999999999873 2334444444332 256888887877766544
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-24 Score=248.07 Aligned_cols=321 Identities=15% Similarity=0.195 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhC------CCCeEEEEEcCCC-----CChhhhhcC
Q 002468 188 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 256 (918)
Q Consensus 188 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~------~~~~I~~flH~Pf-----Ps~e~fr~l 256 (918)
|.+...-|.-++++.++.+.+.--..||||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 33445556556666666554432256999999999999999998753 4789999999852 211111113
Q ss_pred CCh------------HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhh
Q 002468 257 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 324 (918)
Q Consensus 257 P~~------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~ 324 (918)
|+. .-+-.++..||.|..-++.|++...+....-.|++. . +..+..++.++|+|||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---V--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---H--HHhcCCCeeEEeCCccccccCCc
Confidence 311 123345778899888888887764320000011110 0 11134678899999999999864
Q ss_pred hcCCch------------HHHHHHHHHHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEc
Q 002468 325 LEINPV------------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 325 ~~~~~~------------~~~~~~lr~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.. +.. ......++++++ +.++|++||||.+.||++.+++|+.++++. ++.|+++|.
T Consensus 272 ~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~ 344 (489)
T PRK14098 272 TD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGS 344 (489)
T ss_pred cc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeC
Confidence 32 110 011234555442 567999999999999999999999998752 366887774
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 467 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~ 467 (918)
+ +. .+++++++++.+... .|. +.+.++.+++..+|+.||+||+||.+||||++.+|||+|+
T Consensus 345 G-----~~--~~~~~l~~l~~~~~~--------~V~-~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G--- 405 (489)
T PRK14098 345 G-----DK--EYEKRFQDFAEEHPE--------QVS-VQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG--- 405 (489)
T ss_pred C-----CH--HHHHHHHHHHHHCCC--------CEE-EEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC---
Confidence 2 21 245566666665421 254 4577899999999999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 468 KGVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 468 ~g~lIlSe~aG~~~~l------g~~allVnP~D~~~lA~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
.|+|++..+|..+.+ +.+|++|+|.|++++|++|.+++.+ .++....+.++. ....+++..-++.+++-
T Consensus 406 -~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~l 482 (489)
T PRK14098 406 -TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQL 482 (489)
T ss_pred -CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHH
Confidence 689999999998876 3579999999999999999998743 222222222222 23567777777777655
Q ss_pred HHH
Q 002468 540 LND 542 (918)
Q Consensus 540 l~~ 542 (918)
.++
T Consensus 483 Y~~ 485 (489)
T PRK14098 483 YRE 485 (489)
T ss_pred HHH
Confidence 544
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-23 Score=238.33 Aligned_cols=283 Identities=17% Similarity=0.120 Sum_probs=204.8
Q ss_pred HHHhhcC--CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCCCCCh-hhhhcCCChHHHHHHHHhCCEEeEeCHHHH
Q 002468 205 VVNKHYK--DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYA 280 (918)
Q Consensus 205 ~i~~~~~--~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~PfPs~-e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~ 280 (918)
.+.+..+ +.|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....
T Consensus 109 ~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~ 186 (406)
T PRK15427 109 ICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWA 186 (406)
T ss_pred HHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHH
Confidence 3344443 4699999988776677777763 22445677888652211 1110 011223333457899888776544
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.+ +|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||+.
T Consensus 187 ~~l~~-----~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~ 238 (406)
T PRK15427 187 GRLQK-----MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLH 238 (406)
T ss_pred HHHHH-----cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHH
Confidence 44321 121 23568899999999988643110 123456799999999999999
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
.+|+|++.+.+++|+ +.|+++|. ++.. +++++++.+.+. ...+.|.|.++.+++..+|+.
T Consensus 239 ~ll~a~~~l~~~~~~----~~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~ 298 (406)
T PRK15427 239 VAIEACRQLKEQGVA----FRYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDD 298 (406)
T ss_pred HHHHHHHHHHhhCCC----EEEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHh
Confidence 999999999887776 45777763 4433 345555555432 123446899999999999999
Q ss_pred ccEEEECCCC------ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 441 TDVALVTSLR------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 441 ADv~vv~Sl~------EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
||+||+||.. |||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++.+++
T Consensus 299 aDv~v~pS~~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~ 374 (406)
T PRK15427 299 ADVFLLPSVTGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDE 374 (406)
T ss_pred CCEEEECCccCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHH
Confidence 9999999984 99999999999995 899999999999988 67899999999999999999999966777
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 513 REKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 513 r~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
++++.++.++++ ..|++...++.+.+-+.
T Consensus 375 ~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 375 LAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 888888888887 56888888887776554
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-23 Score=243.50 Aligned_cols=295 Identities=20% Similarity=0.234 Sum_probs=197.2
Q ss_pred CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCC-----CCChhhhhc--CCCh-------------HHHHHHHHhCC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPSR-------------SDLLRAVLAAD 270 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~P-----fPs~e~fr~--lP~~-------------~~ll~~ll~aD 270 (918)
..||||+||||..++|.+++.. ..++++.++.|.. ||. ..+.. +|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 5699999999999999998753 3467899999975 221 11111 1110 11334567788
Q ss_pred EEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC--------ch---HHHHHHHHH
Q 002468 271 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN--------PV---QVHIKELQE 339 (918)
Q Consensus 271 lIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~--------~~---~~~~~~lr~ 339 (918)
.|..-++.+++.....- .-.|++. .+..+..++.++|+|||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~~-----~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLDG-----LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChHH-----HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 88777777766543200 0001000 0011345788999999999998653210 00 011234566
Q ss_pred Hhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhccc
Q 002468 340 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 414 (918)
Q Consensus 340 ~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~ 414 (918)
+++ +.++|++||||.+.||+..+++|++.+++. .+.|+++|.+ + + .+++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 653 356788899999999999999999988753 2557777642 2 1 244566666554321
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c-------
Q 002468 415 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 484 (918)
Q Consensus 415 g~~~~~pV~~~~g~v~~~el~aly-~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g------- 484 (918)
.+.++.|+ .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+|..+|+.+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445665 57888877 56999999999999999999999994 688999999998877 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 485 --AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 485 --~~allVnP~D~~~lA~ai~~a---L~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|+|.|++++|++|.++ ++. ++.++++.++.+ .+.++|..-++.+++-..+.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHH
Confidence 369999999999999999985 433 344444444443 36678877777777665554
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-22 Score=232.72 Aligned_cols=289 Identities=19% Similarity=0.193 Sum_probs=211.7
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh---cCCC--hHHHHH--HHHhCCEEeEeCHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLLR--AVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr---~lP~--~~~ll~--~ll~aDlIgf~t~~~~~~Fl 284 (918)
..|+|++|++....++.++++. .+.|+.+.+|..++-...+. ..|. ...+++ .+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999997666666666553 46788899997542111110 0111 122222 34578999999988777665
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~ 361 (918)
. ..+. ...++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235688999999998886431 11233344 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCcEEEEEEEcCCCCCh-HHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 362 ~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~-~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
+++|++.+++++|+. ++.|+++|.+.. ++ +.. +++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886542 23 333 3344555544321 1254 6789999999999999
Q ss_pred ccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 002468 441 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 518 (918)
Q Consensus 441 ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~ 518 (918)
||++++||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++.+ +.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 899999999988887 56799999999999999999999854 56667777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 519 HNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 519 ~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
+.++.++.+++...++.+++-+.+.
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888899988888887766543
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-23 Score=234.94 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=196.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC--hhh-hh-cCCCh--------HH---HHHHHHhCCEEeEeC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 276 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs--~e~-fr-~lP~~--------~~---ll~~ll~aDlIgf~t 276 (918)
..|+|+.|. .+....++++..|++++..+.|..+-. .+. |. ..+.+ .. ....+..||.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 469999994 555666789989999988777643311 010 10 11111 11 224566788888776
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEec-
Q 002468 277 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 352 (918)
Q Consensus 277 ~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdR- 352 (918)
......|.. . + ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 544333321 0 1 1468899999999998764211 01111111 46788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHH---HHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC
Q 002468 353 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE---YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429 (918)
Q Consensus 353 Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~---y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 429 (918)
+.+.||+..+++|+..+.+++|++ .|+++|......+.. -..+++ +++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWKQ---HMLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHHH---HHHHHhhcccC---cceEE-EeCCC
Confidence 999999999999999998888875 477777532110100 001111 22222222111 12355 57999
Q ss_pred CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 002468 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 430 ~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~ 507 (918)
+.+++.++|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++|+
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999995 899999999998888 568999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 002468 508 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 537 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 537 (918)
++ +++..+.++.++++.+ +++..-++.|+
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5777888888988866 77666555554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-22 Score=240.34 Aligned_cols=331 Identities=13% Similarity=0.148 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC----hh-hhhcCC------Ch
Q 002468 192 FAAYIKANQMFADVVNKHYK-DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS----SE-IHRTLP------SR 259 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~-~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs----~e-~fr~lP------~~ 259 (918)
|..-..+....++.+..... ..|+|+.|.+.--+++..++++. ++|..+..|..-.. .. .+..+. .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 66665566666665554432 57999999988778887777754 68877777854110 00 011010 01
Q ss_pred -HHHHHHHHhCCEEeEeCHHHHHHHHHHHH-----HHhccc---cCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCch
Q 002468 260 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFE---GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 330 (918)
Q Consensus 260 -~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~-----r~lg~~---~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~ 330 (918)
..-+..|-.||.|.-.|++....-...+. ..+... ..-+++.+ ...|+.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124567799999888754322111111 011110 00011211 22478899999999999764321110
Q ss_pred -HHHH----------HHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC---
Q 002468 331 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 391 (918)
Q Consensus 331 -~~~~----------~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~--- 391 (918)
.... ...++.+ +++++|++||||++.||+..+++||.++.+.. ..+.||+||.+...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccc
Confidence 0000 0112222 36789999999999999999999998764332 24678888864311
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCccCChhHHHHHHhcCC
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~----~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
...+..+..+++.+++.+.+. .+ .|. |.|. .+..++..+|+ .+||||+||.+||||||++|||||+
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~-flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIR-WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEE-EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 111222334556666665432 12 355 4565 35666666675 2479999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 467 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+.+++| +.|+|...++.+++-.
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 678999999999999999999874 24456667777777776 6788888888877554
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-22 Score=235.60 Aligned_cols=311 Identities=22% Similarity=0.257 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhC-----CCCeEEEEEcCCCCCh----hhhhc--CCC---
Q 002468 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS--- 258 (918)
Q Consensus 193 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~-----~~~~I~~flH~PfPs~----e~fr~--lP~--- 258 (918)
..|...++...+.+.+.-...|+||+||+|..++|.+++... .+.|+.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 344444555555554444568999999999999999998764 5789999999874321 11111 111
Q ss_pred ----------h-HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhh
Q 002468 259 ----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRAL 325 (918)
Q Consensus 259 ----------~-~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~ 325 (918)
. ..+..++..||.|...++.+++.+.+. .. ..+++ ...+..++.++|||||.+.|.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 1 123345667888888887776654321 00 00000 112346789999999999988643
Q ss_pred cCC-----------chHHHHHHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCC
Q 002468 326 EIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 389 (918)
Q Consensus 326 ~~~-----------~~~~~~~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ps 389 (918)
... .-......+++++ .++++|+++||+.+.||+..+++|++.+.++. +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 334 (476)
T cd03791 262 DPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG- 334 (476)
T ss_pred cchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC-
Confidence 211 0012233466655 36789999999999999999999999987643 557777642
Q ss_pred CCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCc
Q 002468 390 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 469 (918)
Q Consensus 390 r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g 469 (918)
+ + .+++++++++.+.. ..++++.+ .+.+++..+|+.||++|+||.+||||++.+|||+|+ .
T Consensus 335 --~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~ 395 (476)
T cd03791 335 --D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG----T 395 (476)
T ss_pred --C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----C
Confidence 1 2 24455556655431 13555544 457778899999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 470 VLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 470 ~lIlSe~aG~~~~l--g~------~allVnP~D~~~lA~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++.++ ..+++..-++.+++-
T Consensus 396 pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 396 VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHH
Confidence 99999999999988 34 799999999999999999998643 2333333333322 346666666666543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-22 Score=237.00 Aligned_cols=331 Identities=14% Similarity=0.120 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCC-----------CCChh-hhhcC-C
Q 002468 192 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 257 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~P-----------fPs~e-~fr~l-P 257 (918)
|..-..++...++.+.... ...|+|+-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6555555666666554433 257999999777778888887754 78888888843 11111 11100 0
Q ss_pred ChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH-----hccc--c-CCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC-
Q 002468 258 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-----LGFE--G-TPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN- 328 (918)
Q Consensus 258 ~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~-----lg~~--~-~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~- 328 (918)
...+ ...|-.||.|...|+......-..+.++ ++.. + .-.++.+. .-++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0111 2245577777766654332111000000 0000 0 00112111 22788899999999987532110
Q ss_pred -------chHHHH---HHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCC-CCC
Q 002468 329 -------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 392 (918)
Q Consensus 329 -------~~~~~~---~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ps-r~~ 392 (918)
.+.+.. ...++.+ +++++|++|||+++.||+..+++||.++.+..++ +.|++||.+. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 000000 0011112 3567999999999999999999999987665543 5688887541 111
Q ss_pred --hHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCccCChhHHHHHHhcCC
Q 002468 393 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 393 --~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---g~v~~~el~aly~-~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
..+..+..+++.+++.+.+.. + .|.++. +.++..+++.+|+ ++||||+||.+||||+|++|||||+
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 111112224455666654321 2 255432 2455678888777 5799999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 467 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++|. ..++.+.++.++.++++ +.|+|...++.+++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999987653 34567777778888887 6789888888877644
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-22 Score=231.47 Aligned_cols=277 Identities=18% Similarity=0.208 Sum_probs=197.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh-H---HHHHH-HHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~-~---~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
+.|+||+|+...+.++.++-.+..++|+.+.+|.-+|........++. + .+.+. ...+|.|...+....+.|..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655544433344678888888755432110011111 0 11122 23578888888766655542
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh----cCCeEEEEEecccccCCHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vIl~VdRLd~~KGi~~~ 362 (918)
.+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||+..+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 111 013468899999999998754321 1123333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|++++ |+ +.|+++|. ++.. +++++++... +|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~~----~~l~~~~~~~----------~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPYR----EELEKMFAGT----------PTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChHH----HHHHHHhccC----------CeE-EeccCCHHHHHHHHHHCC
Confidence 9988754 54 45777763 4433 3444444321 355 579999999999999999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 517 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~ 517 (918)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++. ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999994 899999999998877 3579999999999999999999985 45777788
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH-HHHh
Q 002468 518 WHNFTHVTTHTAQEWAETFVSE-LNDT 543 (918)
Q Consensus 518 ~~~~~~v~~~~~~~W~~~fl~~-l~~~ 543 (918)
++.++++++|++...++.++.. ...+
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8888999999999998888874 4443
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=221.27 Aligned_cols=287 Identities=21% Similarity=0.200 Sum_probs=204.7
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh-----cCCChHHH-HHHHHhCCEEeEeCHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSDL-LRAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr-----~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl 284 (918)
...|+||+|++...+.+.++++ ..+.|+.+.+|..+|...+.. .......+ ...+..+|.|.+.+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 3579999999887766665544 457888999998665321110 00011111 2234578988888876655554
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~ 361 (918)
+ ..-+. ...++.++|+|||++.|.+.. ...+++++ .++++|+++||+.+.||+..
T Consensus 161 ~---~~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 K---YYPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred H---HcCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 2 10011 234688999999998886431 11233444 35679999999999999999
Q ss_pred HHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002468 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 441 (918)
Q Consensus 362 ~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 441 (918)
+++|++++. ++ +.|+++|... ...++.+++++.+..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~----~~l~i~g~g~-----~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KD----VQVVLCAGAP-----DTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hc----CcEEEEeCCC-----CcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999998873 23 3466555321 11234455555555543221 2367778899999999999999
Q ss_pred cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHhcCCHHHH
Q 002468 442 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEER 513 (918)
Q Consensus 442 Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~------~~lA~ai~~aL~m~~~er 513 (918)
|++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++|+|.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 99999999999999999999994 899999999999888 567999999998 9999999999985 4567
Q ss_pred HHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 514 EKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 514 ~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
.++..+.++.+ +.+++..+++.+++.+.+
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777776 678999999988876654
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-21 Score=219.71 Aligned_cols=295 Identities=20% Similarity=0.237 Sum_probs=207.1
Q ss_pred HHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhc-----CCC-hHHH-HHHHHhCCEEeEeC
Q 002468 204 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----LPS-RSDL-LRAVLAADLVGFHT 276 (918)
Q Consensus 204 ~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~-----lP~-~~~l-l~~ll~aDlIgf~t 276 (918)
..+.+.....|+|++|++....++..+.+. .+.++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 333333336799999998777666666543 468888888875432111000 000 1111 22355799999988
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEeccccc
Q 002468 277 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 356 (918)
Q Consensus 277 ~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~ 356 (918)
......+.. ..+ ....++.++|+|+|.+.|.+..... .....+. ...++.+|+++||+++.
T Consensus 172 ~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 876655543 111 1223478999999998886542211 1111111 12467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHH
Q 002468 357 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 436 (918)
Q Consensus 357 KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 436 (918)
||+..+++|+..+.+++|+ +.|+++|....... .....++++++.+.+.. ..|. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRER----ANLVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 9999999999999887776 45777775432221 12233455555544321 1244 679999999999
Q ss_pred HHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 002468 437 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 514 (918)
Q Consensus 437 ly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~ 514 (918)
+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ ++++
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHH
Confidence 9999999999999999999999999995 799999999999888 45799999999999999999999864 5677
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 002468 515 KRHWHNFTHV-TTHTAQEWAETFV 537 (918)
Q Consensus 515 ~r~~~~~~~v-~~~~~~~W~~~fl 537 (918)
.+..+.++++ +.+++..+++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7777888887 7889888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-21 Score=223.16 Aligned_cols=278 Identities=15% Similarity=0.153 Sum_probs=194.3
Q ss_pred CCCEEEEeCCccchH-HHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH-HHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~ll-p~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
..|+|++|+++.... ...+-.+..+.|+.+..|..|+..+.... +...+.+- +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775543 23333334568899999987653322111 11122222 346888888887655544221
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
.+ ....++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 11 123568899999999988653210 124678999999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
.+++|++ .|+++|. ++.... +++++.+.+ ..+ .|. |.|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~----l~~~~~~~~----l~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRIL----LEEMREKYN----LQD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHH----HHHHHHHhC----CCC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888875 4776763 333333 444444432 111 255 5799999999999999999999999
Q ss_pred CccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcC
Q 002468 450 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHT 528 (918)
Q Consensus 450 ~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 528 (918)
.||||++++|||||+ .|+|+|..+|..+.+.+++.++-|.|.++++++|.+++.++. ++.....+.++.+ +.++
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~~~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~fs 353 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMYS 353 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecCCCHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhCC
Confidence 999999999999994 899999999999988444333334499999999999998764 3334445555544 6688
Q ss_pred HHHHHHHHHHHHHHh
Q 002468 529 AQEWAETFVSELNDT 543 (918)
Q Consensus 529 ~~~W~~~fl~~l~~~ 543 (918)
+..-++++++-.+..
T Consensus 354 ~~~~~~~~~~~y~~l 368 (398)
T cd03796 354 WEDVAKRTEKVYDRI 368 (398)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888887777664
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=228.98 Aligned_cols=283 Identities=19% Similarity=0.148 Sum_probs=197.9
Q ss_pred HHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCCh---hhhhc---CCChHH--------HHH-HHHhC
Q 002468 205 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAA 269 (918)
Q Consensus 205 ~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~---e~fr~---lP~~~~--------ll~-~ll~a 269 (918)
.+...+.+.|+||+|......++..+..+..+.|+.+..|--++.. +++.. .+..+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455566789999998665555555544456789999999765421 22211 000111 111 12356
Q ss_pred CEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEE
Q 002468 270 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 349 (918)
Q Consensus 270 DlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~ 349 (918)
|.|...+........ .+| ....++.++|+|||.+.|.+.... ....+.++|++
T Consensus 246 d~Ii~~s~~~~~~~~-----~~g-----------~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI-----EDG-----------ADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH-----HcC-----------CCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 776665543322211 112 134578899999999988754210 11246789999
Q ss_pred EecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC
Q 002468 350 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429 (918)
Q Consensus 350 VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 429 (918)
+||+.+.||+..+++|++.+.++.|++ .|+++|... +-..+.+++++++.+++.. ..|. |.|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-----~~~~~~~e~~~li~~l~l~------~~V~-f~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-----EDPEYAEECRELVESLGLE------DNVK-FTG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-----cChHHHHHHHHHHHHhCCC------CeEE-EcC--
Confidence 999999999999999999998888864 577676421 1123456677777766432 1355 456
Q ss_pred CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHH
Q 002468 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 501 (918)
Q Consensus 430 ~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~--------~allVnP~D~~~lA~a 501 (918)
.+++..+|+.||++|+||..|||+++++|||||+ .|+|+|+.+|+.+.+.. +|++|+|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999995 89999999999888743 7999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Q 002468 502 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 538 (918)
Q Consensus 502 i~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 538 (918)
|.++++++ +.+.++.++.++++.+ +++...++.|.+
T Consensus 436 i~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999864 5777778888888865 465666666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=212.15 Aligned_cols=194 Identities=22% Similarity=0.375 Sum_probs=146.2
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 653 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i 653 (918)
||++||||||++. ....++++++++|++|+++ +..|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~-------------~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDP-------------NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCC-------------CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 5899999999985 1246899999999999984 6999999999999999999988889999999999
Q ss_pred EecCC-eeeeeccccCChHHH---HHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCC-
Q 002468 654 RCTTG-KWMTTMPEHLNMEWV---DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 728 (918)
Q Consensus 654 ~~~~~-~w~~~~~~~~~~~w~---~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~- 728 (918)
+..++ .|.. +......|. +.+..++..+....++..+|.+...+.+||+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 2332 111111111 23344455555667888889999999999987511 111223344444 33221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 729 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 729 ~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
...+.++ .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.+..
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 689999999999999999999999988 57899999999 9999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-21 Score=216.99 Aligned_cols=232 Identities=16% Similarity=0.169 Sum_probs=172.5
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCe
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 345 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 345 (918)
.+|.+...+....+.+.. .++. ...++.++|+|||.+.|.+..... ....+..+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCe
Confidence 367777777766555432 1121 235678899999998886542111 11111222 3577
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEe
Q 002468 346 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 425 (918)
Q Consensus 346 vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 425 (918)
+|+++||+++.||+..+++|+..+++++|+...++.|+++|. ++.. +++++.+.+.+. ...++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655688888863 3322 334444444322 234456
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 002468 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 503 (918)
Q Consensus 426 ~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~ 503 (918)
.|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 674 5789999999999999999999999999999995 899999999999988 56799999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 504 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 504 ~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
++++++ +++..+.+++++++ ..+++...++.+++-...
T Consensus 334 ~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854 56777777888887 678888888777765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=212.25 Aligned_cols=275 Identities=17% Similarity=0.134 Sum_probs=194.2
Q ss_pred HHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC--hhhhhcCCC--hHHHHHH-HHhCCEEeEeCHHHH
Q 002468 206 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLRA-VLAADLVGFHTYDYA 280 (918)
Q Consensus 206 i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs--~e~fr~lP~--~~~ll~~-ll~aDlIgf~t~~~~ 280 (918)
+++..+ .|+||+|+.+..+....+.+ ..++|+.+.+|..... .......++ ...+.+. +..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 58999997664443333333 2467888888843211 111111111 1222222 346899988887555
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.. .+. ...++.++|+|+|.+.|.+... ..+.++|+++||+.+.||+.
T Consensus 155 ~~~~~-----~~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLA-----LGF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHH-----cCC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 54432 121 2346788999999988764311 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 5777763 332 23455555543211 1244 6899999999999999
Q ss_pred ccEEEECCC------CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 441 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 441 ADv~vv~Sl------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 899999999998887 56899999999999999999999854 46
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 002468 513 REKRHWHNFTHV-TTHTAQEWAETFV 537 (918)
Q Consensus 513 r~~r~~~~~~~v-~~~~~~~W~~~fl 537 (918)
+.++..++++++ ..+++..+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777777788877 5688888877664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=217.37 Aligned_cols=273 Identities=18% Similarity=0.191 Sum_probs=184.3
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcC-------------CChH--HH-----------HH--
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------LR-- 264 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~l-------------P~~~--~l-----------l~-- 264 (918)
+|+|..|--+...+| +.+..+++|+++.+|.|..+.+.+..+ ..+. .+ +.
T Consensus 108 pDv~i~~~g~~~~~~--~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTYP--LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHHH--HHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 575544432333232 444566889999999665455544221 1111 01 11
Q ss_pred HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 002468 265 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 344 (918)
Q Consensus 265 ~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 344 (918)
.+-.||.|...+.....+|.+ ..+ ...++.++|+|||.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~~------------~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LWK------------RNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----HhC------------cCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 234678777776544444322 111 1136788999999988764311 012356
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 423 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 423 (918)
.+|++|||+.+.||+..+|+||..+.+.+|+.. .++.|+++|..... +..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 24778888753211 1123455666776665421 1355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 002468 424 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 497 (918)
Q Consensus 424 ~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l-----g~~allVnP~D~~~ 497 (918)
|.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999994 7899999888654 34 45789974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 002468 498 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 531 (918)
Q Consensus 498 lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 531 (918)
+|++|.++++++++++..+.+..++..+.++...
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999987666655444445456665443
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-20 Score=209.29 Aligned_cols=276 Identities=21% Similarity=0.259 Sum_probs=195.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHH-HhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-LAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+||+|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|+..
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---- 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS---- 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc----
Confidence 46899999999888888887776777888878864321110 11111111 12455555555444444321
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
.+ -...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+.||+..+++|+.
T Consensus 149 ~~-----------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 KA-----------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred cC-----------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 00 0234688999999998876432 1223345554 36789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++.+++|++ .|+++|. ++...+ +.+.+.+.+.. ..|. +.|.+ +++..+|+.||++++|
T Consensus 212 ~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVK-LLGLR--DDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEE-Eeccc--ccHHHHHHhhceEEec
Confidence 998888764 5776763 333233 33444443321 1254 45654 6789999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 527 (918)
|..||||++++|||||+ .|+|+|+.+|..+.+.++|++++|.|++++|++|.++++++++.+..+........+.+
T Consensus 270 s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 345 (360)
T cd04951 270 SAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKF 345 (360)
T ss_pred ccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999995 89999999999888866899999999999999999999877766666655533345789
Q ss_pred CHHHHHHHHHHHH
Q 002468 528 TAQEWAETFVSEL 540 (918)
Q Consensus 528 ~~~~W~~~fl~~l 540 (918)
++..+++.+++-+
T Consensus 346 s~~~~~~~~~~~y 358 (360)
T cd04951 346 SINSIVQQWLTLY 358 (360)
T ss_pred CHHHHHHHHHHHh
Confidence 9999988887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-20 Score=212.85 Aligned_cols=283 Identities=17% Similarity=0.163 Sum_probs=189.5
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHH---------HHHhCCEEeEeCHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR---------AVLAADLVGFHTYDYAR 281 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~---------~ll~aDlIgf~t~~~~~ 281 (918)
...|+|++|+..... + +++... ..++.+..|.| .........+.+.+.+ .+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999998865432 2 233333 37899999954 2211111111111111 13357888776654433
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHH
Q 002468 282 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 282 ~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~ 361 (918)
.+.. .++.. ....+.++|+|||.+.|.+....+ ........++..+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 11100 112235889999999887542211 0011112356788999999999999999
Q ss_pred HHHHHHHHHHhC---cCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHh-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 362 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 362 ~L~Af~~ll~~~---P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
+|+|++++.+++ |+ +.|+++|.+... .+....+.+++++++.+ .+.. ..|+ |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 54 568877753321 12222344556666655 3211 1355 5799999999999
Q ss_pred HHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 002468 438 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 515 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~ 515 (918)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++.+ +.+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 999999999999999999999999994 899999999988888 457899977 9999999999999976 46777
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 002468 516 RHWHNFTHV-TTHTAQEWAET 535 (918)
Q Consensus 516 r~~~~~~~v-~~~~~~~W~~~ 535 (918)
+.++.++++ ..+++...++.
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 777788876 55777766553
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=215.78 Aligned_cols=285 Identities=11% Similarity=0.026 Sum_probs=188.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeE-EEEEcCCCCChhhhhcCCChHHHH----HHHHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLL----RAVLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I-~~flH~PfPs~e~fr~lP~~~~ll----~~ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+||.|++...+++.+..... ..|+ ....|. ++... ++.++ ..+..++++.-.+. ++.+....
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v 349 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-FMSNNHCV 349 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-hhhccHHH
Confidence 46999999999877766665544 4444 444665 32211 11111 12344555443332 33332221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
.+.+... +.-...+|.++|||||++.|.+....+ ......++..+ .+..+|++|+|+.+.||...+|+|
T Consensus 350 ~~~l~~~--------lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A 419 (578)
T PRK15490 350 TRHYADW--------LKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDF 419 (578)
T ss_pred HHHHHHH--------hCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHH
Confidence 1211100 111356789999999999987643211 01111222223 345688899999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
+.++++++|++ .|+++|. ++. ++++++++.+.+.. ..|+ |.|+ .+++..+|+.||+||
T Consensus 420 ~a~llk~~pdi----rLvIVGd-----G~~----~eeLk~la~elgL~------d~V~-FlG~--~~Dv~~~LaaADVfV 477 (578)
T PRK15490 420 AARYLQHHPAT----RFVLVGD-----GDL----RAEAQKRAEQLGIL------ERIL-FVGA--SRDVGYWLQKMNVFI 477 (578)
T ss_pred HHHHHhHCCCe----EEEEEeC-----chh----HHHHHHHHHHcCCC------CcEE-ECCC--hhhHHHHHHhCCEEE
Confidence 99999988874 4777763 443 34455555554321 1355 5676 468999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~--~~er~~r~~~~~ 521 (918)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.++.+
T Consensus 478 lPS~~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~AR 553 (578)
T PRK15490 478 LFSRYEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQ 553 (578)
T ss_pred EcccccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999995 899999999999987 78999999999999998874433221 123445567778
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 002468 522 THV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 522 ~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
+++ +.|++..-.+.+++.++.
T Consensus 554 e~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 554 SFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHhhCCHHHHHHHHHHHHHh
Confidence 877 568888888888776654
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-20 Score=214.67 Aligned_cols=314 Identities=16% Similarity=0.162 Sum_probs=208.6
Q ss_pred HHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCcc-chHHHHHHhhCCCCeEE
Q 002468 162 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVG 240 (918)
Q Consensus 162 f~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL-~llp~~lr~~~~~~~I~ 240 (918)
+-..-.||-||-+.. .+...|.++..+.+ +. |.|||-.--. ..+| ++| ...+||+
T Consensus 109 ~~~~~~~~~~t~~~~----------~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 109 WIEEETYPRFTMIGQ----------SLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred ccccccCCceehHHH----------HHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 345556777775421 23334666643332 12 3578844221 1222 344 2378999
Q ss_pred EEEcCCCCChhhhhcCCC-------------------hHHH-------HHH--HHhCCEEeEeCHHHHHHHHHHHHHHhc
Q 002468 241 WFLHTPFPSSEIHRTLPS-------------------RSDL-------LRA--VLAADLVGFHTYDYARHFVSACTRILG 292 (918)
Q Consensus 241 ~flH~PfPs~e~fr~lP~-------------------~~~l-------l~~--ll~aDlIgf~t~~~~~~Fl~~~~r~lg 292 (918)
+..|.|.-+.+....+-. .+.+ +.. +..||.|...+.-..+++. +..+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~----~~~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIE----ALWR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHH----HHcC
Confidence 999988767654332210 0000 111 2356777766654444432 1111
Q ss_pred cccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHh
Q 002468 293 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 372 (918)
Q Consensus 293 ~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~ 372 (918)
...++.++++|+|.+.|..... ....+++++++|||+.+.||+..+|+||.+++++
T Consensus 241 ------------~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~ 296 (463)
T PLN02949 241 ------------IPERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEK 296 (463)
T ss_pred ------------CCCCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHh
Confidence 1235678899999877632110 0113467899999999999999999999998875
Q ss_pred CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcc
Q 002468 373 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDG 452 (918)
Q Consensus 373 ~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG 452 (918)
.++-..++.|+++|... . ++..++.+++++++.+.+.. + .|. |.|.++.+++.++|+.||++|.||..||
T Consensus 297 ~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~-f~g~v~~~el~~ll~~a~~~v~~s~~E~ 366 (463)
T PLN02949 297 LDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVE-FHKNVSYRDLVRLLGGAVAGLHSMIDEH 366 (463)
T ss_pred ccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEE-EeCCCCHHHHHHHHHhCcEEEeCCccCC
Confidence 44222246688887532 1 11223345566666654321 1 255 5689999999999999999999999999
Q ss_pred CChhHHHHHHhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 002468 453 MNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT 526 (918)
Q Consensus 453 ~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l-----g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~ 526 (918)
||++++|||||+ .|+|++..+|..+ .+ |.+|++++ |++++|++|.+++++++++++++.++.++.+.+
T Consensus 367 FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 367 FGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred CChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999994 7999999998753 33 34688874 999999999999998878888888889999999
Q ss_pred cCHHHHHHHHHHHHHHh
Q 002468 527 HTAQEWAETFVSELNDT 543 (918)
Q Consensus 527 ~~~~~W~~~fl~~l~~~ 543 (918)
+++..-++++++.+...
T Consensus 441 FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPI 457 (463)
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 99988888887776654
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-19 Score=204.66 Aligned_cols=276 Identities=16% Similarity=0.170 Sum_probs=192.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhC---CCCeEEEEEcCCCCChhhhhcCCChHH-HHHHHHhCCEEeEeCHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRSD-LLRAVLAADLVGFHTYDYARHFVSAC 287 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~---~~~~I~~flH~PfPs~e~fr~lP~~~~-ll~~ll~aDlIgf~t~~~~~~Fl~~~ 287 (918)
..|+|++|++....++.++.... .+.++.+.+|-.-.. ....-+.... +...+..+|.|...+......+..
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-- 159 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYE-- 159 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHH--
Confidence 46899999876555555544322 267888888843111 1111122222 233456799999998876665543
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHH
Q 002468 288 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 288 ~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
..+ ...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 160 --~~~------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 160 --LFD------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred --hcC------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 111 1235789999999987754321 1122333 46789999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|++.+.++ ++ +.|+++|.+ +....+ ++++.+.+. . ..|+ +.|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~----~~~~~~~~~----~--~~v~-~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPA----ERLARELGL----Q--DDVL-FLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHH----HHHHHHcCC----C--ceEE-EecCc--ccHHHHHHhcCEE
Confidence 99987654 32 446766642 222333 344443321 1 1255 45654 5799999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|..+++++ +++.++..++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999999888 56899999999999999999999854 566777777787
Q ss_pred H-HHhcCHHHHHHHHHHHHH
Q 002468 523 H-VTTHTAQEWAETFVSELN 541 (918)
Q Consensus 523 ~-v~~~~~~~W~~~fl~~l~ 541 (918)
. ...+++...++.+++-++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 350 RAAERFDSERIVPQYEALYR 369 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHH
Confidence 7 567888888888776554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-20 Score=205.75 Aligned_cols=266 Identities=20% Similarity=0.221 Sum_probs=191.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|..+...+..++.+ ..++|+.+.+|-.++.... .. ..+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YN---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HH---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 469999998776555554443 3478999999976643321 11 224568988887765544443 222
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 368 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~~ 368 (918)
+. ...++.++|+|||...|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 22 234688899999998886543211 1222244444 367789999999999999999999999
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.+.+++ +.|+++|... ....+.+.+.+.+.+.+.. ..|. +.|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~-~~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVT-FVGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEE-EcCC--cccHHHHHHhCCEEEecC
Confidence 9887665 4577777532 2223444454454443211 1255 4566 678999999999999999
Q ss_pred -CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 449 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 449 -l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++...++++.++.+++++.+.
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999995 899999999988887 347999999999999999998888778888888888888886
Q ss_pred hc
Q 002468 526 TH 527 (918)
Q Consensus 526 ~~ 527 (918)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 53
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.5e-20 Score=214.43 Aligned_cols=274 Identities=15% Similarity=0.090 Sum_probs=187.1
Q ss_pred cCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChh-hhhcCC-C---hHHHHHHHHhCCEEeEeCHHHHHHHH
Q 002468 210 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE-IHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 210 ~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e-~fr~lP-~---~~~ll~~ll~aDlIgf~t~~~~~~Fl 284 (918)
..++|+|+++-.+... +.. .+..+.+++..++|.-.-... .-...+ | -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~-~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAV-LENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHH-HhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567998886655443 333 355678999999996421110 000000 1 11223444457888877765444433
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
..... +.+...+|.++|+|++...+.+. .......|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11234568899999876544321 0123467999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|+.++.+++|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999999875 4776763 3433 3455665554321 1 244 56764 577899999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 513 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a-G~~~~l--g~~allVnP----~D----~~~lA~ai~~aL~m~~~er 513 (918)
|+||.+||||++++|||||+ .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 899999986 777777 788999984 33 8899999999994 3467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 514 EKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 514 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
.++.++.++.++.+++..-++.+.+-++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7788888888888888877777665544
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=208.60 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=198.0
Q ss_pred CCCCEEEEeCCccchH--HHHHHhhCCCCeEEEEEcCCCCChhhhh-cC--CChHH----HHHH-HHhCCEEeEeCHHHH
Q 002468 211 KDGDVVWCHDYHLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHR-TL--PSRSD----LLRA-VLAADLVGFHTYDYA 280 (918)
Q Consensus 211 ~~~DiIwvHDyhL~ll--p~~lr~~~~~~~I~~flH~PfPs~e~fr-~l--P~~~~----ll~~-ll~aDlIgf~t~~~~ 280 (918)
.+.|+||+|...++.. ...+++ ..+.++.+..|--||..-.-. .. +.... +.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 4579999998665432 223333 345677777775554321100 01 11011 1122 336899988888766
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccC
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 357 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~K 357 (918)
+.+.+ .+. ...++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~~-----------~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KGV-----------AAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cCC-----------CcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65532 121 2357889999999998875421 1 122345555 3567899999999999
Q ss_pred CHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 358 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 358 Gi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
|+..+++|++.+ +++|+ +.|+++|. ++.. +++++++.+.+. ..|+ |.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~-f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVH-FLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceE-EeCCCCHHHHHHH
Confidence 999999999876 44554 55777753 4433 344455544322 1365 5789999999999
Q ss_pred HHHccEEEECCCCccCC----hhHHHHHHhcCCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHhcCCHH
Q 002468 438 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 511 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~n----Lv~lEamA~~~~~~g~lIlSe~aG~--~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~ 511 (918)
|+.||++|+||..|+++ ...+|||||+ .|+|+|..+|. .+.+..+|++|+|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4579999994 89999988774 355556899999999999999999999865 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 002468 512 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 544 (918)
Q Consensus 512 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 544 (918)
++..+.++.++++. .+++...++.|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77788888888875 6899999999988887653
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.7e-20 Score=221.20 Aligned_cols=280 Identities=14% Similarity=0.075 Sum_probs=183.2
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEE-EEcCCC--CChhhhhcCCChHHHHHHHHhCCEEeEe--CHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPF--PSSEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~-flH~Pf--Ps~e~fr~lP~~~~ll~~ll~aDlIgf~--t~~~~~~Fl~~ 286 (918)
..|||++|.+.-..+..+..+.. .+|+.+ .+|+-. ...+.++. ....+...+..++.+.+. +....+.|..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRTMPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCCCccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 46999999988877777666543 455544 556521 11121110 011122333334433333 2222222221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc-CCeEEEEEecccccCCHHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
.++. ...+|.++|+|||++.|.+. +........++.... +.++|++|||+++.||+..+|+|
T Consensus 476 ---~~g~-----------~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---WLGV-----------DERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---HcCC-----------ChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 1221 34578899999999888642 111111122222222 45688999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
|..+++++|++ .|+++|. ++. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~----~LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKV----RFIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCe----EEEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEEE
Confidence 99999999875 4777764 332 34455566554321 1244 67775 47899999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~--~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++.+
T Consensus 597 lpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 9999999999999999994 899999999999988 568999998875 689999999887543 2233445667
Q ss_pred HHH-HhcCHHHHHHHHHHH
Q 002468 522 THV-TTHTAQEWAETFVSE 539 (918)
Q Consensus 522 ~~v-~~~~~~~W~~~fl~~ 539 (918)
+++ +.|++..-++.+++-
T Consensus 672 ~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 672 DWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhCCHHHHHHHHHHH
Confidence 776 567777766666543
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-20 Score=205.45 Aligned_cols=251 Identities=18% Similarity=0.066 Sum_probs=172.3
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHH-HHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
+.|+|++|..+...++.++.+......+.+..|..+...+.+........+. ..+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 5799999998876777766665555556677787654433222211100111 12334677766665544443220
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
....++.++|+|||.+.|..... ..+. ++.+ .++.+|+++||+++.||+..+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11346889999999988765321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+++|++ .|+++|. ++....++ +.+.+.+. . ..|+ +.|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~----~~~~~~~~----~--~~v~-~~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIK----KKVKELGL----E--DKVI-FLGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHH----HHHHhcCC----C--CcEE-Eecc--cCCHHHHHHhcCEEEec
Confidence 999988874 5777763 33333333 33333221 1 1354 4565 67899999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~-~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
|..||||++++|||||+ .|+|+|+.+|..+.++. .+++..+.+++++|++|.++++++...
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRE 335 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchh
Confidence 99999999999999994 89999999999998854 345555667899999999999988643
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=207.28 Aligned_cols=276 Identities=20% Similarity=0.200 Sum_probs=199.9
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCCh--hhhhc---CCChHHHHHHHHhCCEEeEeCHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~--e~fr~---lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
...|+||+|++..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 5679999999877765 456788889899654421 11110 011223344566889999888766665543
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHH
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
. .+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 111 2346789999999987764321 11 1111223577899999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
+..+.+.+|+ +.|+++|.... .+......+ .+. +. ...+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999888774 45776764321 111122222 111 11 12334689999999999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+||..||||++++|||+|+ .|+|+|+.+|..+.++.++++++|.|+++++++|.++++. ++.+..+.++.++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999994 7999999988888888889999999999999999999875 4577777788888889
Q ss_pred hcCHHHHHHHHH
Q 002468 526 THTAQEWAETFV 537 (918)
Q Consensus 526 ~~~~~~W~~~fl 537 (918)
.+++..+++.++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999988775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=201.44 Aligned_cols=278 Identities=17% Similarity=0.189 Sum_probs=186.2
Q ss_pred cCCCCEEEEeCCccc-hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH------HHHHHhCCEEeEeCHHHHHH
Q 002468 210 YKDGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 282 (918)
Q Consensus 210 ~~~~DiIwvHDyhL~-llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l------l~~ll~aDlIgf~t~~~~~~ 282 (918)
....|+|++|+.... ..+.....+..+.++.+..|..++....... +....+ -..+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 346799999984332 2222222223467888888876654321000 011111 11133567777766443322
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCH
Q 002468 283 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 283 Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi 359 (918)
... .+...++.++|+|+|.+.|...... . . ++.+ .++++|+++||+++.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~---~----~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPSR---G----R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchhh---h----h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 211 1124568899999999888643210 0 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
..+++|+..+.+++|++ .|+++|... +.+. ..++.++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999999887764 477676421 1221 222333333221 1 1244 689999999999999
Q ss_pred HccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 002468 440 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEEREKRHW 518 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~-~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~ 518 (918)
.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+.. .++++ |.|.++++++|.++++++ ++++.+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999995 89999999999888843 44555 556699999999999987 67777788
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 002468 519 HNFTH-VTTHTAQEWAETFV 537 (918)
Q Consensus 519 ~~~~~-v~~~~~~~W~~~fl 537 (918)
+.++. .+.+++..-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 57777777766654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-19 Score=205.23 Aligned_cols=272 Identities=14% Similarity=0.087 Sum_probs=191.0
Q ss_pred CCCEEEEeCCccch-HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH-HHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~l-lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
+.|+++.|-++... ...++++.....++....|-.....+.+ .+....+.+. +-.+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 45677666544433 3345566555556777788432111111 1111122222 34789999988766554432
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
.++ ....++.++|+|+|...+.+.. ...+...|+++||+.+.||++.+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1234678999999987664320 113567899999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 447 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~--ADv~vv~ 447 (918)
.+.+|+. ++.++.+|. ++.... +++++.+.+. . ..|. |.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~--~l~~~iiG~-----g~~~~~----l~~~~~~~~~----~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSI--KIKWTHIGG-----GPLEDT----LKELAESKPE----N--ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCc--eEEEEEEeC-----chHHHH----HHHHHHhcCC----C--ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 9998876 366776663 333333 4444432211 0 1354 6899999999999986 7899999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP-~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
|..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++.++.++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999995 899999999999988 446899987 4899999999999985 467888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 002468 525 -TTHTAQEWAETFV 537 (918)
Q Consensus 525 -~~~~~~~W~~~fl 537 (918)
+.+++..+.+.|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6788888877775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=199.32 Aligned_cols=280 Identities=21% Similarity=0.198 Sum_probs=192.1
Q ss_pred CCCEEEEeCCccch---HHHHHHh--hCCCCeEEEEEcCCCCChhhhhcCCChHHHHH-HHHhCCEEeEeCHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMF---LPKCLKE--YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 212 ~~DiIwvHDyhL~l---lp~~lr~--~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~-~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
..|+|++|+++-.. ....+.. ...+.++.+.+|...+.... .....+.+ .+..+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 46899998733211 1111111 23678999999986222111 11122222 245789999987444444432
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHH
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
. ....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 01247889999999877653311 0 11 1122467899999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
++.+.+++|+ +.|+++|... +..........+++.+.+. . ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~----~~l~i~G~~~----~~~~~~~~~~~~~i~~~~~----~--~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPD----VRLLVAGETH----PDLERYRGEAYALAERLGL----A--DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCC----eEEEEeccCc----cchhhhhhhhHhHHHhcCC----C--CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 9999888776 4577776422 1111111110022333221 1 23665555599999999999999999
Q ss_pred ECCCCc--cCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 446 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~E--G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
+||..| |++++++|||||+ .|+|+|+.+| .+.+ +.+|++++|.|++++|++|.++++++ +.+.++.++.+
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 7999999988 6666 56799999999999999999999865 46677778888
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 002468 522 THVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 522 ~~v~~~~~~~W~~~fl~~l 540 (918)
+++.++++..+++.+++-+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999998887644
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=202.92 Aligned_cols=191 Identities=15% Similarity=0.199 Sum_probs=125.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 479999999999986 34699999999999987 699999999999999999998874 4689999
Q ss_pred ceEEEe-cCCe-eeeeccccCChHHHHHHHHHHHHHHhc--------CCCceeeeccce-------EEEEeeccChh---
Q 002468 650 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-------LVWNYKYADVE--- 709 (918)
Q Consensus 650 Ga~i~~-~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-------l~~hyr~ad~e--- 709 (918)
|+.+.. .++. +.. ..+ .+.+.++++..... ..+.+....... ..+.+...+.+
T Consensus 67 Ga~I~~~~~~~l~~~----~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQ----DLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEee----cCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999984 3322 222 223 23444444332211 011111000000 00000000000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 710 ---F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 710 ---~-------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
. ......++...+ ...+. ..+.+. ++..++||.|+|+|||.||++|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 001122333334 22222 235544 456799999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHHcCc
Q 002468 779 HFLGKDEDVYAFFEP 793 (918)
Q Consensus 779 D~d~nDedMf~~~~~ 793 (918)
| +.||.+||+.++.
T Consensus 212 D-~~NDi~Ml~~ag~ 225 (272)
T PRK15126 212 D-AMNDREMLGSVGR 225 (272)
T ss_pred C-CHHHHHHHHHcCC
Confidence 9 9999999999953
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=202.74 Aligned_cols=194 Identities=16% Similarity=0.249 Sum_probs=130.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEee
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 648 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liae 648 (918)
..|+|++|+||||++. +..++++++++|++|.+ +|..|+|+|||++..+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 44599999999999886 6999999999999999999999954 69999
Q ss_pred CceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhc--CCCceeeeccceE------------EE-Ee----ecc---
Q 002468 649 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETSL------------VW-NY----KYA--- 706 (918)
Q Consensus 649 nGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~--~~Gs~iE~K~~sl------------~~-hy----r~a--- 706 (918)
||+++...++. +.....+ .+.+..+++..... ....+........ .. ++ ...
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975332 2212233 34455555544222 1111111110000 00 00 000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 707 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 707 d~------e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~-~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
+. ........++.+.+ ...+....+.+.++.. .+||.|+|+|||.|++.++++++ ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333344 3333333456666654 49999999999999999999998 67889999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||.+||++++.
T Consensus 214 -~~ND~~Ml~~ag~ 226 (264)
T COG0561 214 -STNDIEMLEVAGL 226 (264)
T ss_pred -ccccHHHHHhcCe
Confidence 9999999999976
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-19 Score=206.01 Aligned_cols=304 Identities=13% Similarity=0.118 Sum_probs=189.2
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCC------------------------hHHHHH--
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS------------------------RSDLLR-- 264 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~------------------------~~~ll~-- 264 (918)
.+.|++|.||++.-.....||++.++++..|+.|-. ++-|.|-. .+--++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEeccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 468999999999999999999888999999999943 33342110 000011
Q ss_pred HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC----chHHHHHH----
Q 002468 265 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 336 (918)
Q Consensus 265 ~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~----~~~~~~~~---- 336 (918)
....||.+..-+....+ -|..+++ +...+ |+|||||++.|.+..... ..++++.+
T Consensus 223 aa~~Ad~fttVS~it~~----E~~~Ll~------------~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITAY----EAEHLLK------------RKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHHH----HHHHHhC------------CCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 12334444433322111 1223333 23223 899999999987543111 11122222
Q ss_pred -HHHHh---cCCeEEEE-Eecccc-cCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcCCCCCh---------HHHHHHH
Q 002468 337 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLT 400 (918)
Q Consensus 337 -lr~~~---~~~~vIl~-VdRLd~-~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~psr~~~---------~~y~~l~ 400 (918)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..-..-. +..|+..+..|+.... +-.++|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 34444 26778888 899999 9999999999998755211111 1123333445554331 2334566
Q ss_pred HHHHHHHHhhhcc--------------------------------------------------------------cC-CC
Q 002468 401 SQVHEIVGRINGR--------------------------------------------------------------FG-TL 417 (918)
Q Consensus 401 ~~l~~lv~~IN~~--------------------------------------------------------------~g-~~ 417 (918)
+.+..+..+|+.+ |. ..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 6666665555544 10 01
Q ss_pred CcccEEEeCCCCC------HHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCch----hhcc---
Q 002468 418 TAVPIHHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 484 (918)
Q Consensus 418 ~~~pV~~~~g~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~----~~lg--- 484 (918)
+.+.|+|...+++ ..+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 2234444433333 2457889999999999999999999999999994 899999999984 4443
Q ss_pred CCeEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 485 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 485 ~~allVn-------P~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
..|++|. +.+++++|++|.+.+.++..++........+....++|.+-+..++..
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A 583 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKA 583 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3578887 456789999999999776443333333333556667776666666544
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=204.17 Aligned_cols=274 Identities=20% Similarity=0.159 Sum_probs=188.4
Q ss_pred HHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCC-CChhhhhcCCC---hHHHHHHHHhCCEEeEeCH
Q 002468 202 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTY 277 (918)
Q Consensus 202 fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~Pf-Ps~e~fr~lP~---~~~ll~~ll~aDlIgf~t~ 277 (918)
|.+.+.. .+..|+|.+|..+.... .+.......++..++|... .....-...++ .+.++..+..+|.|.+.+.
T Consensus 90 ~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 166 (372)
T cd04949 90 FLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATE 166 (372)
T ss_pred HHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccH
Confidence 4444443 46789999988776655 2223334555666777532 11110001111 2344555667899998887
Q ss_pred HHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccC
Q 002468 278 DYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 357 (918)
Q Consensus 278 ~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~K 357 (918)
.-.+.+.. .++ ...++.++|+|+|...+.+.. .....+..|+++||+.+.|
T Consensus 167 ~~~~~l~~----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K 217 (372)
T cd04949 167 QQKQDLQK----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEK 217 (372)
T ss_pred HHHHHHHH----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCccc
Confidence 66655543 111 112377899999988765421 0123567899999999999
Q ss_pred CHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 358 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 358 Gi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
|+..+|+|+.++.+++|++ .|+++|.+ +....++ .++.+.+. .+ .|. +.|. .+++..+
T Consensus 218 ~~~~li~a~~~l~~~~~~~----~l~i~G~g-----~~~~~~~----~~~~~~~~----~~--~v~-~~g~--~~~~~~~ 275 (372)
T cd04949 218 QLDQLIKAFAKVVKQVPDA----TLDIYGYG-----DEEEKLK----ELIEELGL----ED--YVF-LKGY--TRDLDEV 275 (372)
T ss_pred CHHHHHHHHHHHHHhCCCc----EEEEEEeC-----chHHHHH----HHHHHcCC----cc--eEE-EcCC--CCCHHHH
Confidence 9999999999999999875 47766642 2222233 33333221 11 244 5663 4679999
Q ss_pred HHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 002468 438 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 514 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a-G~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~ 514 (918)
|+.||++|+||..||||++++|||+|+ .|+|+++.+ |..+.+ |.+|++|+|.|++++|++|..+|+++ +.+.
T Consensus 276 ~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~ 350 (372)
T cd04949 276 YQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQ 350 (372)
T ss_pred HhhhhEEEecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999999999999999994 799999877 777777 67899999999999999999999976 4667
Q ss_pred HHHHHHHHHHHhcCHHHHHH
Q 002468 515 KRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 515 ~r~~~~~~~v~~~~~~~W~~ 534 (918)
.+.++.++...++++..+++
T Consensus 351 ~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 351 KFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HHHHHHHHHHHHhhHHHHHh
Confidence 77777887777777766654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-20 Score=199.10 Aligned_cols=193 Identities=16% Similarity=0.237 Sum_probs=124.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 489999999999986 34689999999999996 799999999999999999888874 4689999
Q ss_pred ceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhc---------CCCceeeeccc------e---EEEEeec---cCh
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER---------TPRSHFEQRET------S---LVWNYKY---ADV 708 (918)
Q Consensus 650 Ga~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~---------~~Gs~iE~K~~------s---l~~hyr~---ad~ 708 (918)
|+.+...++.. +.....+ .+.+.++++...+. ..+.++..... . ..+.... ...
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998533321 1111223 23444444433211 01111110000 0 0000000 000
Q ss_pred h-h--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 709 E-F--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 709 e-~--------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
+ . ......++.+.+ ...+. ..+.+. .+..++||.|+|+|||.|+++|++++| ++.++++|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 0 0 001112233333 22111 234543 456899999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHHcCc
Q 002468 779 HFLGKDEDVYAFFEP 793 (918)
Q Consensus 779 D~d~nDedMf~~~~~ 793 (918)
| +.||++||+.++.
T Consensus 214 D-~~NDi~Ml~~ag~ 227 (266)
T PRK10976 214 D-GMNDAEMLSMAGK 227 (266)
T ss_pred C-CcccHHHHHHcCC
Confidence 9 9999999999854
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=198.17 Aligned_cols=187 Identities=16% Similarity=0.172 Sum_probs=126.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc---eEEe
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 647 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l---~lia 647 (918)
..++||+|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+...+..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999975 34578999999999996 6999999999999999999998854 6999
Q ss_pred eCceEEEecCC-ee---eeeccccCChHHHHHHHHHHHHHHhcCCCcee--e-e----------------------ccce
Q 002468 648 ENGMFLRCTTG-KW---MTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--E-Q----------------------RETS 698 (918)
Q Consensus 648 enGa~i~~~~~-~w---~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E-~----------------------K~~s 698 (918)
+||+.+...++ .. ........+ .+.+.++++..... .+..+ . . ....
T Consensus 71 ~NGa~I~~~~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEAS 146 (271)
T ss_pred eCCCEEEecCcccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccC
Confidence 99999985322 10 001101122 23444444443221 01100 0 0 0000
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCC---CCceEE
Q 002468 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYVL 775 (918)
Q Consensus 699 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~---~~d~vl 775 (918)
..+.+.. ++ ....++.+.+ .. ..+.++.+..++||.|+|+|||.|+++|+++++ + +.++++
T Consensus 147 ~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~vi 210 (271)
T PRK03669 147 VTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTTL 210 (271)
T ss_pred ceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceEE
Confidence 0111110 11 1223344444 22 145666666799999999999999999999998 6 789999
Q ss_pred EEecCCCCcHHHHHHcCc
Q 002468 776 CIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 776 aiGD~d~nDedMf~~~~~ 793 (918)
|||| +.||++||++++.
T Consensus 211 afGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 211 GLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEcC-CHHHHHHHHhCCE
Confidence 9999 9999999999964
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-19 Score=196.34 Aligned_cols=265 Identities=19% Similarity=0.170 Sum_probs=190.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|..+...+..++..+....+..+.+|.+..... +....+...+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999987665555555555557888888885421111 11123334455799999988876665543 11
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 2 1245788999999998876431 0112456789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~- 450 (918)
.+|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 557767642 222 233344444321 1233468999999999999999999999999
Q ss_pred -----ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 002468 451 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 523 (918)
Q Consensus 451 -----EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~ 523 (918)
|||+++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +++..+.++.++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 99999999999994 899999998888777 44799999999999999999999876 4566677777777
Q ss_pred HH-hcCHHHHH
Q 002468 524 VT-THTAQEWA 533 (918)
Q Consensus 524 v~-~~~~~~W~ 533 (918)
+. .|++...+
T Consensus 342 ~~~~~s~~~~~ 352 (355)
T cd03799 342 VEEEFDIRKQA 352 (355)
T ss_pred HHHhcCHHHHh
Confidence 74 46655544
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.4e-20 Score=193.38 Aligned_cols=182 Identities=12% Similarity=0.190 Sum_probs=121.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999976 34689999999999996 799999999999999998887774 4799999
Q ss_pred ceEEEec--CCeeeeeccccCChHHHHHHHHHHHHHHhcCCCc--eeeec--c--ceEEEEeeccChhhhHHHHHHHHHH
Q 002468 650 GMFLRCT--TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDMLQH 721 (918)
Q Consensus 650 Ga~i~~~--~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~~a~el~~~ 721 (918)
|+++... +..+.. .... .+..+++.+....+.. .+... . ......++..+ . .++.+.
T Consensus 68 Ga~i~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~ 132 (230)
T PRK01158 68 GGVISVGFDGKRIFL---GDIE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVREL 132 (230)
T ss_pred CeEEEEcCCCCEEEE---cchH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHHHH
Confidence 9999753 222211 1111 1222333222221111 11100 0 00011111111 1 112222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 722 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 722 L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+ +.. ...+.+..+...+||.|+++|||.|++.++++++ ++++++++||| +.||++||+.++.
T Consensus 133 l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 133 L-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred H-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 2 221 1245566666789999999999999999999998 67899999999 9999999999843
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-20 Score=199.55 Aligned_cols=191 Identities=16% Similarity=0.238 Sum_probs=123.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc-----eEE
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 646 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l-----~li 646 (918)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+...+..+++ ++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I 67 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCI 67 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999986 35689999999999987 6999999999999999999888753 589
Q ss_pred eeCceEEEe--cCCe-eeeeccccCChHHHHHHHHHHHHHHhc--------CCCceeeeccce-----------EEEEee
Q 002468 647 AENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNYK 704 (918)
Q Consensus 647 aenGa~i~~--~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-----------l~~hyr 704 (918)
+.||+.+.. .++. +... .+. +.+..+++..... ..+.++..+... +...+.
T Consensus 68 ~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (270)
T PRK10513 68 TNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFR 140 (270)
T ss_pred EcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCcccc
Confidence 999999984 2322 2222 232 2233333322111 111121111100 000000
Q ss_pred cc---Chh--h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCC
Q 002468 705 YA---DVE--F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 771 (918)
Q Consensus 705 ~a---d~e--~-------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~ 771 (918)
.. ++. . ......++.+.+ ...+. ..+.++ .+..++||.|+|+|||.|+++|+++++ ++.
T Consensus 141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~ 212 (270)
T PRK10513 141 EVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKP 212 (270)
T ss_pred chhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCH
Confidence 00 000 0 001112222233 11111 235544 457799999999999999999999998 678
Q ss_pred ceEEEEecCCCCcHHHHHHcCc
Q 002468 772 DYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 772 d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++++|||| +.||++||+.++.
T Consensus 213 ~~v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 213 EEVMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred HHEEEECC-chhhHHHHHhCCc
Confidence 99999999 9999999999843
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-18 Score=192.52 Aligned_cols=277 Identities=20% Similarity=0.199 Sum_probs=192.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCC-hHHHHHHH-HhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAV-LAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~-~~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
..|+|++|+++.......+.......++.+..|..++... ...+. ...+..-+ ..+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999988777776665567888888887654421 00111 11121112 2456665555543333321
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 366 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af 366 (918)
. +. ...++.++|+|+|...|.+.... ...+++++ .++.+|+++||+.+.||+..+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 1 21 23467789999999887654221 12233334 3567889999999999999999999
Q ss_pred HHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH-hhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 367 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG-RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 367 ~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~-~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
..+.+++|+ +.|+++|.+. ....++ .... .. +.. ..|. +.+. .+++..+|+.||+++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~~----~~~~~~~----~~~--~~v~-~~g~--~~~~~~~~~~adi~v 273 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANLE----LLALKEL----GLE--DKVI-LLGE--RSDVPALLNALDVFV 273 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHHH----HHHHHhc----CCC--ceEE-Eccc--cccHHHHHHhCCEEE
Confidence 999888776 4577676432 111222 2222 22 211 1244 4454 467999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+||..||||++++|||+|+ .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++..+.+++++.+.
T Consensus 274 ~ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (365)
T cd03807 274 LSSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIE 348 (365)
T ss_pred eCCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 89999999999888855799999999999999999999976 567777777887774
Q ss_pred -hcCHHHHHHHHHHH
Q 002468 526 -THTAQEWAETFVSE 539 (918)
Q Consensus 526 -~~~~~~W~~~fl~~ 539 (918)
.+++..-++.|++.
T Consensus 349 ~~~s~~~~~~~~~~~ 363 (365)
T cd03807 349 ENFSIEAMVEAYEEL 363 (365)
T ss_pred HhCCHHHHHHHHHHH
Confidence 57888877777654
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-19 Score=194.79 Aligned_cols=271 Identities=20% Similarity=0.194 Sum_probs=188.4
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChH---------HHH-HHHHhCCEEeEeCHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLL-RAVLAADLVGFHTYDYAR 281 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~---------~ll-~~ll~aDlIgf~t~~~~~ 281 (918)
..|+|++|+...+........+..+.++.+.+|.+++. +....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 46899999875544333333334578899999988763 222212111 111 223468888888776444
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCC
Q 002468 282 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 358 (918)
Q Consensus 282 ~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KG 358 (918)
.+.. . +...++.++|+|+|...|.+.... . .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----~------------~~~~~~~vi~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----Y------------GVKRPIEVIPTGIDLDRFEPVDGD----D----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----c------------CCCCceEEcCCccchhccCccchh----H----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1 122347899999999887653211 1 12222 35678999999999999
Q ss_pred HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002468 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438 (918)
Q Consensus 359 i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 438 (918)
+..+++|++.+.++.++ +.|+++|. ++.. ..+++++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGD-----GPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 55777763 2222 2344444433211 1244 67999999999999
Q ss_pred HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 002468 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 516 (918)
Q Consensus 439 ~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r 516 (918)
+.||++++||..||+|++++|||+|+ .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .++.+
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 899999999988887 468999999888 99999999999874 45667
Q ss_pred HHHHHHHHHhcCHHHHHHHHHH
Q 002468 517 HWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 517 ~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
.++.++.+..++ |++.+.+
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~ 369 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEK 369 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHH
Confidence 777788887654 4444433
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.8e-19 Score=195.17 Aligned_cols=195 Identities=17% Similarity=0.188 Sum_probs=145.1
Q ss_pred eeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC
Q 002468 312 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 391 (918)
Q Consensus 312 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~ 391 (918)
+|+|||++.|.+.... ..+..+++...+++..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~~--~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEKL--VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccchh--hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 6789999998764210 1112222222235667899999999999999999999999999998765677776541
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCc
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 469 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g 469 (918)
.. +++ + +..+ .|+++. |.++.+++.++|+.||+||+||..||||++++|||||+ .
T Consensus 192 --~~-------~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~ 248 (335)
T PHA01633 192 --KQ-------FTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----T 248 (335)
T ss_pred --HH-------HHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----C
Confidence 11 111 1 1111 355432 67789999999999999999999999999999999995 7
Q ss_pred eEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 002468 470 VLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 529 (918)
Q Consensus 470 ~lIlSe~aG~~~~lg------------------~--~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 529 (918)
|+|+|..+|..+..| . .|++|+++|++++|++|.+++.+.. +..+..++++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcCH
Confidence 999999888777653 1 2457888999999999999988763 33445567788999998
Q ss_pred HHHHHHHH
Q 002468 530 QEWAETFV 537 (918)
Q Consensus 530 ~~W~~~fl 537 (918)
..-.++|+
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 88777664
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-18 Score=190.10 Aligned_cols=282 Identities=22% Similarity=0.179 Sum_probs=201.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh----cCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 287 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr----~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~ 287 (918)
..|+|++|+++...+.. +.....+.++.+.+|-+++...... ...........+..+|.+.+.+......+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999999887765 3444678899999998876432110 00011122233556788888887666555431
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHH
Q 002468 288 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 288 ~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
. .....++.++|+|+|...+.+.. .. .........+++.|+++||+.+.||+..+++|+.
T Consensus 163 ---~-----------~~~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 163 ---G-----------GVPPEKITVIPNGVDTERFRPAP-----RA-ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred ---C-----------CCCCCcEEEecCcccccccCccc-----hH-HHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 0 01124788999999998775421 00 0000011245678999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+.+|+ +.|+++|. ++....++ +++.+.+.. ..|. +.|.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPD----VRLVIVGD-----GPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCC----eEEEEEeC-----cHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEEEec
Confidence 99887765 55777762 33333333 333332211 1344 57899999999999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THV 524 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~-~~v 524 (918)
+..||++++++|||+|+ .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++.+ +.++++.++.+ ...
T Consensus 283 ~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHH
Confidence 99999999999999994 899999999998888 46899999999999999999999875 45666666666 456
Q ss_pred HhcCHHHHHHHHHHHH
Q 002468 525 TTHTAQEWAETFVSEL 540 (918)
Q Consensus 525 ~~~~~~~W~~~fl~~l 540 (918)
+.+++..+++.+++-+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 358 ERFSWDRVAARTEEVY 373 (374)
T ss_pred HhcCHHHHHHHHHHhh
Confidence 7889999888877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=201.13 Aligned_cols=187 Identities=15% Similarity=0.076 Sum_probs=129.1
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEec-c-cccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdR-L-d~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4688999999975433211100 001 1246788999999 4 4789999999999875 22 356887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC-CHHHHHHHHHHccEEEECCCCccCChhHHHHHHh
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v-~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~ 463 (918)
+|... ... . ..|.+ .|.. +.+++..+|+.||+||+||.+|||++|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 77421 100 0 12443 3443 6789999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 464 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 464 ~~~~~g~lIlSe~aG~~~~l-g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
+ .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... +........++.+ ..+++..-++.+++-..
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 899999999998888 45899999999999998653322110 0000123345554 56888888887776443
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-18 Score=190.36 Aligned_cols=282 Identities=23% Similarity=0.213 Sum_probs=195.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
...|+|++|......+...+.....+.++.+..|.+++....... .........+..+|.+.+.+......|.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 357999999655444333333334457888888877653321111 1122233345578999998877666654311
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
....++.++|+|+|...|.+.... ....+ ....++..|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADRA-----EARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcchH-----HHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 123568899999999887653210 00111 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 450 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~ 450 (918)
+++|+ +.|+++|. ++....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~-----~~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGD-----GPLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcC-----CcchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 87665 45776653 22222233 33333221 1233467999999999999999999999999
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHhc
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 527 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~-~~v~~~ 527 (918)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999995 899999999988887 4457999999999999999999998753 3344444 445677
Q ss_pred CHHHHHHHHHHHHHH
Q 002468 528 TAQEWAETFVSELND 542 (918)
Q Consensus 528 ~~~~W~~~fl~~l~~ 542 (918)
++..+++.+.+.+.+
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 888888887766543
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-18 Score=191.03 Aligned_cols=279 Identities=19% Similarity=0.178 Sum_probs=196.7
Q ss_pred cCCCCEEEEeC-CccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcC-CC-------hHHHH-HHHHhCCEEeEeCHHH
Q 002468 210 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-PS-------RSDLL-RAVLAADLVGFHTYDY 279 (918)
Q Consensus 210 ~~~~DiIwvHD-yhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~l-P~-------~~~ll-~~ll~aDlIgf~t~~~ 279 (918)
....|+|++|. ..+..++........+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 44679999998 344445544444455789999999887754321111 11 11111 2245689999999877
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCH
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi 359 (918)
.+.|.. .+ ....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 766541 11 1235788999999998776542211 01111 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
..+++|+..+.+. |+ +.|+++|. ++....++ +++... + ...|.+ .|.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~----~~~~~~----~---~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELK----ELAKAL----G---LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHH----HHHHHc----C---CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998766 54 45776653 33333333 222111 1 124664 57999999999999
Q ss_pred HccEEEECCCCccC-----ChhHHHHHHhcCCCCceEEEeCCCCchhhcc--CCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 440 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSLG--AGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~-----nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg--~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
.||++++||..|++ +++++|||+|+ .|+|+|..+|..+.+. .+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66789999994 8999999999999883 4799999999999999999999654 57
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHH
Q 002468 513 REKRHWHNFTHVT-THTAQEWAETF 536 (918)
Q Consensus 513 r~~r~~~~~~~v~-~~~~~~W~~~f 536 (918)
+..+.++.++++. .+++..+++.|
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 7777888888886 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-18 Score=193.23 Aligned_cols=272 Identities=24% Similarity=0.199 Sum_probs=192.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh----HHHHHH-HHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~----~~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+|++|+............+..++++.+++|..||..-........ ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 468999997544322222222345688888899877632211111111 122222 34678888887765542211
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCeEEEEEecccccCCHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
....++.++|+|+|.+.|.+..... ..++.+ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0123577899999998886542211 112222 45778999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|+..+.++ |+ +.|+++|. ++....++ .. ...|. +.|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~--------~~--------~~~v~-~~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PP----VRLVIVGD-----GPARARLE--------AR--------YPNVH-FLGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CC----ceEEEEeC-----CchHHHHh--------cc--------CCcEE-EEeccCHHHHHHHHHhCCEE
Confidence 99998776 65 45776763 22221121 11 12355 46789999999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
++||..||||++++|||||+ .|+|+|+.+|..+.+ +..|++++|.|.++++++|.++++.+ +++.++....++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999988888 35799999999999999999999865 567777788888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 002468 523 HVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 523 ~v~~~~~~~W~~~fl~~l 540 (918)
.+..+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888899999888887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=197.36 Aligned_cols=235 Identities=14% Similarity=0.142 Sum_probs=165.4
Q ss_pred CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 4699999998777666666654 333455666776554321111 12235688888877655444432
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEeccc--ccCCHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKLLAFEK 368 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd--~~KGi~~~L~Af~~ 368 (918)
.++ ...++.++|+|||.+.|.... + ...++++|+++||+. +.||+..+++|+..
T Consensus 151 ~~~-----------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RGI-----------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cCC-----------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 121 124678899999976654211 1 013467899999996 46999999999987
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCC--HHHHHHHHHHccEEEE
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD--FPALCALYAVTDVALV 446 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~--~~el~aly~~ADv~vv 446 (918)
+. + ++.|+++|. +++.+ ++++++.+.|.. ..|+ |.|.++ .+++..+|+.||++|+
T Consensus 207 ~~---~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---G----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---C----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhcCcEEEE
Confidence 52 2 366887764 34333 344555544321 1254 567664 5899999999999999
Q ss_pred CCCCccCChhHHHHHHhcCCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 447 TSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 447 ~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
||..||||++++|||||+ .|+|+|+ .+|+.+.+ |.+|++|+|.|++++|++|.++++.+.
T Consensus 264 ~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred CCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 999999999999999995 8999999 88888877 568999999999999999999998774
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-18 Score=196.73 Aligned_cols=279 Identities=16% Similarity=0.111 Sum_probs=179.0
Q ss_pred HHHHHHHHhhcC--CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhc------CCChH------H----
Q 002468 200 QMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS------D---- 261 (918)
Q Consensus 200 ~~fa~~i~~~~~--~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~------lP~~~------~---- 261 (918)
..+.+.+.+..+ +.|+|++|...+. .++.....+.|..+-+|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 344455555553 5699999864433 33332233566666666321 111111 11110 0
Q ss_pred HHH-HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHH
Q 002468 262 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 340 (918)
Q Consensus 262 ll~-~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 340 (918)
+-+ .+..+|.|.+.+....+.+.+ ..+ ....++.++|+|||.+.|.+....+. . .
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~~-----------~~~~~v~vipngvd~~~f~~~~~~~~------~---~ 220 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LAP-----------EAAGRITAFPNGVDADFFSPDRDYPN------P---Y 220 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hCC-----------CCCCCeEEeecccchhhcCCCccccC------C---C
Confidence 001 133678888877766555432 111 12346788999999998865421100 0 0
Q ss_pred hcCCeEEEEEecccccCCHHHHH----HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCC
Q 002468 341 FAGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 416 (918)
Q Consensus 341 ~~~~~vIl~VdRLd~~KGi~~~L----~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~ 416 (918)
..++++|+++||+++.||+..++ .++..+.+++|++ .|+++|. ++. .+++++.. .
T Consensus 221 ~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~-----g~~-----~~~~~l~~----~--- 279 (397)
T TIGR03087 221 PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGA-----KPS-----PAVRALAA----L--- 279 (397)
T ss_pred CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECC-----CCh-----HHHHHhcc----C---
Confidence 13567899999999999999888 5566667778875 4777763 222 12333311 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-cCCeEEECCCC
Q 002468 417 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWN 494 (918)
Q Consensus 417 ~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-g~~allVnP~D 494 (918)
..|+ |.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|++|. .|
T Consensus 280 ---~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~ 348 (397)
T TIGR03087 280 ---PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-AD 348 (397)
T ss_pred ---CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CC
Confidence 1254 578886 68899999999999997 599999999999994 788888864322111 34678885 89
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 495 ITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 495 ~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
++++|++|.++++++ +.++.+.++.++++ +.|++...++.+.+-+
T Consensus 349 ~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 349 PADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999864 56777788888887 5788888888776554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=189.51 Aligned_cols=262 Identities=17% Similarity=0.105 Sum_probs=181.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.+.+.+......+ .
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------~ 151 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------Y 151 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh-------h
Confidence 5799999998722222222221 1477788887654322111 011112233557888888877554111 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
.....++.++|+|+|...+... ...+++.++++||+.+.||+..+++|++.+.+
T Consensus 152 -----------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 152 -----------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred -----------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 1123468899999998765432 12457789999999999999999999999988
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 451 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~E 451 (918)
.+|++ .|+++|.. +.... +.+++.+++. .+.+.+.|. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47766632 22222 3334444332 123335665 689999999999999999999
Q ss_pred cCChhHHHHHHhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 002468 452 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 528 (918)
Q Consensus 452 G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l---g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 528 (918)
|||++++|||+|+ .|+|+|+..|..+.+ +.+|+++++.|++++|++|.++++++ +.+..+.++.++.++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 799999876655544 34899999999999999999999865 466666677788888888
Q ss_pred HHHHHHHHH
Q 002468 529 AQEWAETFV 537 (918)
Q Consensus 529 ~~~W~~~fl 537 (918)
+..+++.|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.8e-19 Score=202.77 Aligned_cols=264 Identities=11% Similarity=0.071 Sum_probs=164.6
Q ss_pred CCCEEEEeCCccchH---HHHHHhhCCCCeEEEEEcCCCCChhhhhcCC--ChHHHHHHHHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFL---PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~ll---p~~lr~~~~~~~I~~flH~PfPs~e~fr~lP--~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+|++|+.-.+.. +..++++. .. ++.++|+.|+. +++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 369999999655554 33444433 34 77789998853 332211 1111111111 12222221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cC---CeEEEEEecccccCCHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~vIl~VdRLd~~KGi~~~ 362 (918)
|+.++.++... .++. ..+...+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~~--~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAAT--QDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHHH--HHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 33333222100 0000 012234589999988754321 11112 22 3468999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
|+||..+.+..|++ .|+++| +||+..+|+ +++.+++. .+++|.|..+.+ .+|+.+|
T Consensus 247 i~a~~~l~~~~~~~----~l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGL----EVDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCe----EEEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 99999988888874 466664 566655555 44444321 133467765554 6899999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
|||+||.+||||+|++|||||+ .|+|+++..| .+.+ |.+|+++ .|.++++++|.++|..++++... +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~G----~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAMG----KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHcC----CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 9999999999999999999994 7888888776 5767 6788887 48999999999999865432211 11
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 002468 521 FTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 521 ~~~v~~~~~~~W~~~fl~~l~ 541 (918)
...++|..-.++|+..+.
T Consensus 373 ---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 373 ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhc
Confidence 236777777777766553
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=187.52 Aligned_cols=184 Identities=17% Similarity=0.287 Sum_probs=125.2
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 652 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa~ 652 (918)
||+|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.++++.++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 799999999986 34599999999999997 699999999999999999999884 5999999999
Q ss_pred EEecCCeeeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeec-----------c-----------------
Q 002468 653 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQR-----------E----------------- 696 (918)
Q Consensus 653 i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K-----------~----------------- 696 (918)
+....++.. .....+ .+.+..+++...... .+.++... .
T Consensus 66 i~~~~~~~l--~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKIL--YEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEE--EEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccc--hhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 943333321 111223 344445554443321 11111111 0
Q ss_pred -ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEE
Q 002468 697 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 775 (918)
Q Consensus 697 -~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vl 775 (918)
..+.++. ++ .....+.+++ ...+...-..+..+..++||.|+++|||.|++.|+++++ ++.+.++
T Consensus 141 i~ki~~~~---~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFFP---DP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEES---CH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeeccc---cc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 0001000 11 1223333333 222222113345679999999999999999999999998 6789999
Q ss_pred EEecCCCCcHHHHHHcCc
Q 002468 776 CIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 776 aiGD~d~nDedMf~~~~~ 793 (918)
+||| +.||++||+.+..
T Consensus 207 ~~GD-~~ND~~Ml~~~~~ 223 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGY 223 (254)
T ss_dssp EEES-SGGGHHHHHHSSE
T ss_pred Eeec-ccccHhHHhhcCe
Confidence 9999 9999999999843
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-18 Score=186.07 Aligned_cols=257 Identities=19% Similarity=0.193 Sum_probs=176.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|.+..+.++.+...+...+++.+++|-.++.... ...+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~------~~~~~---~~~d~ii~~s~~~~~~~~~----~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR------QGLFK---KGGDAVIAPSRFLLDRYVA----N- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch------hhhhc---cCCCEEEEeCHHHHHHHHH----c-
Confidence 46999999875554433322223458899999865432111 11111 1128888877655554432 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11347889999999987754311 012456789999999999999999999998866
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~ 450 (918)
++ +.|+++|... ......... .. ...|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 43 5677776432 111111111 11 01344 5789999999999999999999998 7
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 528 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 528 (918)
|||+++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++.+ +.++.+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 899999999998888 34799999999999999999999854 4566666666666543
Q ss_pred HHHHHHHHHH
Q 002468 529 AQEWAETFVS 538 (918)
Q Consensus 529 ~~~W~~~fl~ 538 (918)
..+++.+++
T Consensus 347 -~~~~~~~~~ 355 (359)
T cd03823 347 -EDQAEEYLK 355 (359)
T ss_pred -HHHHHHHHH
Confidence 455554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=206.54 Aligned_cols=198 Identities=13% Similarity=0.186 Sum_probs=126.5
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
++.| +.+.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+...+..+++
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 3444 446899999999999986 45799999999999997 6999999999999999988887642
Q ss_pred -----------eEEeeCceEEEecCCe--eeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeeccceE-EE
Q 002468 644 -----------WLAAENGMFLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETSL-VW 701 (918)
Q Consensus 644 -----------~liaenGa~i~~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~sl-~~ 701 (918)
++|+.||+.|...++. +... ++ .+.+.++++...+.. .+.|........ .+
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999853222 2222 23 244455554332211 111110000000 00
Q ss_pred Ee--e--c---c-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHH
Q 002468 702 NY--K--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRI 757 (918)
Q Consensus 702 hy--r--~---a-d~-e~------------~--~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~L 757 (918)
++ . . . +. ++ . ......+.+.+ ...+. ..+.++ .+..++||.|+|+|||.||+.|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 0 0 0 00 00 0 00011222222 22121 235544 4678999999999999999999
Q ss_pred HHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 758 LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 758 l~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++++| ++.++++|||| +.||.+||+.++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99999 68899999999 9999999999853
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=192.15 Aligned_cols=212 Identities=13% Similarity=0.104 Sum_probs=151.1
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEE
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 347 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vI 347 (918)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...+..++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 377777777654444432 1110 1236889999999998864311 01244566
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCC
Q 002468 348 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 427 (918)
Q Consensus 348 l~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 427 (918)
++++|+.+.||++.+|+|++.+.+++|+ +.|+++|. ++. ++ + +. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~-----~~~--~~--~---l~-~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSS-----NML--DP--R---LF-GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeC-----ccc--ch--h---hc-ccc------c------eec
Confidence 6778999999999999999999887775 45776762 111 11 1 10 010 1 235
Q ss_pred CCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEE---------------
Q 002468 428 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV--------------- 490 (918)
Q Consensus 428 ~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allV--------------- 490 (918)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 899999999888877 4566665
Q ss_pred -----CCCCHHHHHHHHHHHhcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 491 -----NPWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 491 -----nP~D~~~lA~ai~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
+| |.++++++|.++|..+ ++++++++ ...+...+++++...++.+++-++
T Consensus 273 ~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 273 VGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44 7788999999999874 23444444 444556789999999998887764
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-17 Score=186.01 Aligned_cols=262 Identities=21% Similarity=0.203 Sum_probs=180.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH-HHHHHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
...|+|++|+...+.....+.. ..+.+..+++|........+. .....+ -..+..||.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLL-PRKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHh-ccCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 4679999998655433222222 246677888886432211111 111122 22456789988888766554321
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
. . ....++.++|+|||...|.+.... . ........++.+|+++||+.+.||+..+++|++++
T Consensus 155 ~-~-----------~~~~~~~~i~~gi~~~~~~~~~~~---~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L-R-----------RFRDKVRVIPLGLDPARYPRPDAL---E---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h-c-----------CCccceEEecCCCChhhcCCcchh---h---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 1 112467899999999877643210 0 01111124678999999999999999999999886
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
. ++.|+++|. ++.. .++.+++.+.+.. ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 366777764 2322 2334444333211 2355 5799999999999999999999997
Q ss_pred --CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 450 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 450 --~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l---g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
.||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++++ ++++++.++.++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999994 899999999888876 56899999999999999999999865 56777777888877
Q ss_pred Hh
Q 002468 525 TT 526 (918)
Q Consensus 525 ~~ 526 (918)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 54
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=184.05 Aligned_cols=273 Identities=20% Similarity=0.128 Sum_probs=190.3
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCC--ChHHHH-HHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLL-RAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP--~~~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
..|+|++|..+..++..++++.....++.+.+|...+.... .... ....+- ..+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 46899999887777777776655566777777764321110 0000 001111 12345789998888777665431
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 368 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ 368 (918)
... ....++.+.|+|+|.+.+.+.... ...++..|+++||+.+.||+..+++|++.
T Consensus 157 --~~~----------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 --GII----------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred --cCC----------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 110 013457788999999877643210 12467899999999999999999999999
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.+.+|+ +.|+++|..... . ..... ++...+.. ..|. +.|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~---~--~~~~~---~~~~~~~~------~~v~-~~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEE---N--PAAIL---EIEKLGLE------GRVE-FLGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcc---h--hhHHH---HHHhcCCc------ceEE-Eeec--cccHHHHHHhccEEEecC
Confidence 8877776 457777653311 1 11111 12222111 2355 4555 678999999999999999
Q ss_pred CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HH
Q 002468 449 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 525 (918)
Q Consensus 449 l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~-v~ 525 (918)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++.++.+++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 899999999999888 56799999999999999999988765 4566667777777 57
Q ss_pred hcCHHHHHHHHH
Q 002468 526 THTAQEWAETFV 537 (918)
Q Consensus 526 ~~~~~~W~~~fl 537 (918)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=184.29 Aligned_cols=181 Identities=17% Similarity=0.214 Sum_probs=119.4
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 652 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa~ 652 (918)
|++|+||||++. ...++++++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999986 34689999999999997 799999999999999988887774 5799999999
Q ss_pred EEecCC---eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002468 653 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 729 (918)
Q Consensus 653 i~~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 729 (918)
+...++ .|...+ ...|................-.+.. ...+.......+++ .+.++.+++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQYPR--RASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhcccccc--ccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986432 233222 3334322111110000000000000 01111111111222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 730 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 730 ~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..+.+..+...+||.|++++||.|+++++++++ ++.+++++||| +.||++||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 67899999999 9999999999854
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=186.59 Aligned_cols=191 Identities=16% Similarity=0.212 Sum_probs=122.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. +..++++++++|++|.+ +|+.|+|+|||++..+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 589999999999976 34689999999999997 699999999999999999988884 4699999
Q ss_pred ceEEEec-CCeeeeeccccCChHHHHHHHHHHHHHHhcCCCc--------eeeecc--c--------eEEE----Eeecc
Q 002468 650 GMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--------HFEQRE--T--------SLVW----NYKYA 706 (918)
Q Consensus 650 Ga~i~~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--------~iE~K~--~--------sl~~----hyr~a 706 (918)
|+.+... +++. +.....+ .+.+.++++......-.. +..... . .+.. .+...
T Consensus 68 Ga~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T PRK10530 68 GTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQV 142 (272)
T ss_pred CcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEc
Confidence 9999852 3321 1111223 244444554432211011 111000 0 0000 00000
Q ss_pred Ch--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCC
Q 002468 707 DV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 768 (918)
Q Consensus 707 d~--e~----~-----------~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~ 768 (918)
+. +. . .....++.+.+ . ...++.+. .+..++||.+++++||.|+++++++++
T Consensus 143 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g------ 212 (272)
T PRK10530 143 DSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV-E---HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG------ 212 (272)
T ss_pred ccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH-h---hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00 00 0 00011222222 1 11233332 345689999999999999999999998
Q ss_pred CCCceEEEEecCCCCcHHHHHHcCc
Q 002468 769 TAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 769 ~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.+++++||| +.||.+||+.++.
T Consensus 213 i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 67899999999 9999999999853
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-18 Score=195.51 Aligned_cols=278 Identities=10% Similarity=0.011 Sum_probs=179.8
Q ss_pred CCCCEEEEeCCccc--h-HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh------HHHHHH-H-HhCCEEeEeCHHH
Q 002468 211 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR------SDLLRA-V-LAADLVGFHTYDY 279 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--l-lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~------~~ll~~-l-l~aDlIgf~t~~~ 279 (918)
+..|+|++|..... . ++.++++ ..+.|+.+.+|--+++..-. ..+.. ...++. + -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985543 2 2333333 34688888888654321100 01100 011111 2 2478887777654
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 342 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 342 (918)
.+.+.+ .+ ....+|.++|+| +.+.|.+.... .....+.. . -+
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 433321 11 124578899999 55677654211 11111110 0 12
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCc--cCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~--~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
+..+++++||+.+.||+..+|+|++.+.+..++. ..++.|+++|. ++.. +++++++.+.+. .
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~----~~l~~~~~~~~l-------~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLK----EKYLERIKELKL-------K 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccH----HHHHHHHHHcCC-------C
Confidence 3467889999999999999999999987632110 01356887764 3333 344455544321 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEEC---CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVT---SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 495 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~---Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~ 495 (918)
.++++.|.++.+++..+|+.||++|++ +..+||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 477778889999999999999999974 33588999999999994 799999999998888 56899994 99
Q ss_pred HHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 002468 496 TEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFV 537 (918)
Q Consensus 496 ~~lA~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl 537 (918)
+++|++|..+++++ +++++++.++.++..+ ..|.+.+.
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 99999999999982 5677777777777664 35555544
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-18 Score=200.90 Aligned_cols=262 Identities=11% Similarity=0.080 Sum_probs=161.4
Q ss_pred CCCEEEEeCCccchHH---HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHH--
Q 002468 212 DGDVVWCHDYHLMFLP---KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp---~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~-- 286 (918)
+.||||++..-.+... ..+.+++ + +++..+||.|+.+--...+..-+.++. .++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 5699999985544333 2233333 2 688889999985322222222122111 122233332
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc---CCeEEEEEecccccCCHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 363 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vIl~VdRLd~~KGi~~~L 363 (918)
|+.++.++.... ++. ...|. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 455554431100 111 11111 1259999999865321 111 1221 234589999999999999999
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
+|+..+.++.|++ .|+++| +||...+++ +++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~reeLe----~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAHEVQ----RAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHHHHH----HHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877764 577665 455544444 44444321 2544 45543 33479999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
||+||.+||||+|++|||||+ .|||+++..|.. .+ |.++++ +.|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999994 899999988753 34 456665 3799999999999999775 33221 1
Q ss_pred HHHHhcCHHHHHHHHHH
Q 002468 522 THVTTHTAQEWAETFVS 538 (918)
Q Consensus 522 ~~v~~~~~~~W~~~fl~ 538 (918)
....++|..-++.|++
T Consensus 690 -a~~~~SWeAaadrLle 705 (794)
T PLN02501 690 -QRYNLSWEAATQRFME 705 (794)
T ss_pred -HHhhCCHHHHHHHHHH
Confidence 1235666666666554
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-17 Score=184.31 Aligned_cols=242 Identities=19% Similarity=0.148 Sum_probs=164.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|+....++ . .+..+.++.+.+|..+..... .........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 469999999887766 2 234567888999987643211 123344445555544443222111
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 148 ------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 148 ------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred ------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 01 467789999999988642 1245789999999999999999999754
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~ 450 (918)
++ +.|+++|... ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++|+||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4577777432 111 12222222210 11 1355 5799999999999999999999998 5
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 527 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 527 (918)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+ ..++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999995 899999999999888 347999987 99999999999875421 11222 2556
Q ss_pred CHHHHHHHHHH
Q 002468 528 TAQEWAETFVS 538 (918)
Q Consensus 528 ~~~~W~~~fl~ 538 (918)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 66655555543
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.1e-18 Score=182.12 Aligned_cols=198 Identities=18% Similarity=0.219 Sum_probs=123.9
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc---C-ceE
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 645 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---~-l~l 645 (918)
.+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 45799999999999986 45789999999999987 69999999999999998888743 2 367
Q ss_pred EeeCceEEEecCCee-eeeccccCChHHHHHHHHHHHHHH-----hcCCCceeeeccceEEEEee-ccC-h----hhh--
Q 002468 646 AAENGMFLRCTTGKW-MTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 711 (918)
Q Consensus 646 iaenGa~i~~~~~~w-~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~hyr-~ad-~----e~~-- 711 (918)
|++||+.+...++.+ ...++..++.++...+.++++.+. ....+.+++.......+.+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 999999998644332 222111123344444444433221 11123333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecC---CCCc
Q 002468 712 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKD 784 (918)
Q Consensus 712 ---~~~a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~---d~nD 784 (918)
.....++.+.+ ...+....+.... +..++||.|+|+|||.||+.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 01112344444 3323332334444 357999999999999999999987 3689999992 3799
Q ss_pred HHHHHHcCc
Q 002468 785 EDVYAFFEP 793 (918)
Q Consensus 785 edMf~~~~~ 793 (918)
++||++++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997643
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=185.72 Aligned_cols=248 Identities=20% Similarity=0.193 Sum_probs=167.9
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCC----Ch-hhhhcCCChH--------HH-----HHHHHhCCEE
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSRS--------DL-----LRAVLAADLV 272 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfP----s~-e~fr~lP~~~--------~l-----l~~ll~aDlI 272 (918)
.+.|+|+++...... ..+ ..+..+..+++|.|.+ .. .+....+... .. .+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 367999776532221 112 3456777888898621 11 1111111100 01 1224567888
Q ss_pred eEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEec
Q 002468 273 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 352 (918)
Q Consensus 273 gf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdR 352 (918)
...+....+.+.+ ..+ . +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8877765555532 111 1 235789999998876421 23567999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHH
Q 002468 353 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 432 (918)
Q Consensus 353 Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~ 432 (918)
+.+.||++.+++|++++ | +.|+++|. +++...++ + ... ..|. |.|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~----~---~~~--------~~V~-~~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLR----A---KAG--------PNVT-FLGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHH----h---hcC--------CCEE-EecCCCHH
Confidence 99999999999999865 3 23666663 33333333 2 110 2365 57999999
Q ss_pred HHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 433 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 433 el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
++..+|+.||++|+||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|..+++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999995 899999999988887 468999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHH
Q 002468 511 EEREKRHWHNFTHVTTHTAQEWAET 535 (918)
Q Consensus 511 ~er~~r~~~~~~~v~~~~~~~W~~~ 535 (918)
...+.+++.+..+++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 123344555566666655443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-17 Score=181.95 Aligned_cols=268 Identities=16% Similarity=0.050 Sum_probs=177.8
Q ss_pred CCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHH-----HHHHhCCEEeEeCHHHHHHHH
Q 002468 212 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 212 ~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll-----~~ll~aDlIgf~t~~~~~~Fl 284 (918)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3466666665443 33333333 367888888853111111110 1 11111 124568888887765444432
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHH--hcCCeEEEEEecccccCCHHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET--FAGRKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~vIl~VdRLd~~KGi~~~ 362 (918)
...+ ... .++|+|+|...+.+. ...++. +.+++.|+++||+.+.||+..+
T Consensus 160 ----~~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 ----EKYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred ----HhcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1112 111 689999998876531 011112 2355678999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|+.++.. ++.|+++|.... ...+.+++.+. . +.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~-----~~~~~~~~~~~---~----~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADH-----NTPYGKLLKEK---A----AAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCC-----cchHHHHHHHH---h----CCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 356887775321 11233333321 1 111 1355 579999999999999999
Q ss_pred EEEECCCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 443 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 443 v~vv~Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+....++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 899999999988888778999998876 999999999976 45666667777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 002468 522 THVT-THTAQEWAETFVSEL 540 (918)
Q Consensus 522 ~~v~-~~~~~~W~~~fl~~l 540 (918)
+.+. .+++..-+++|++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 478777777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=183.87 Aligned_cols=191 Identities=16% Similarity=0.249 Sum_probs=129.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC----ceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~----l~lia 647 (918)
+.+|++|+||||++..+ .+..++|++.++|+++.+ .|+.++++|||+...+.++...++ ..+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999986 688999999999999998866552 35899
Q ss_pred eCceEEEecCC-----eeeeeccccCChHHH-HHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHH
Q 002468 648 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 721 (918)
Q Consensus 648 enGa~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 721 (918)
+||+.|..++. .|.... ...|. +.+..+...+...++....+.+...+.+.+.... ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 121111 12233 3344444444333444444455566666543211 11112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 722 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 722 L~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
+ ... ...+.+ ..+..++||.|++++||.|++++++.++ ++.+.+++||| +.||++||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999998 67899999999 99999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=178.30 Aligned_cols=183 Identities=15% Similarity=0.172 Sum_probs=123.4
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----eEEeeC
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 649 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~liaen 649 (918)
||++|+||||++. +..+++.+ ++|+ +. ++|+.++|+|||++..+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999985 23456655 7776 44 46999999999999999999988743 499999
Q ss_pred ceEEEecCCeeeeeccccCChHHHHHH-----HHHHHHHHhcCCCceeeeccc--eEEEEeeccChhhhHHHHHHHHHHH
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 722 (918)
Q Consensus 650 Ga~i~~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~~~~Gs~iE~K~~--sl~~hyr~ad~e~~~~~a~el~~~L 722 (918)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. ...++|+..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 11 011121111 111233444567776666552 35677764322111 122333444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 723 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 723 ~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++.+++||| +.||++||+.+.
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~ 195 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLT 195 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCC
Confidence 222 123443 4566789999999999999999999998 56889999999 999999999763
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=179.76 Aligned_cols=191 Identities=16% Similarity=0.285 Sum_probs=124.6
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa 651 (918)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+...+..++ .++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 34689999999999997 599999999999999999998874 479999999
Q ss_pred EEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeeccce-EEEE----eec----cChhh----
Q 002468 652 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-LVWN----YKY----ADVEF---- 710 (918)
Q Consensus 652 ~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~s-l~~h----yr~----ad~e~---- 710 (918)
.+...+++ .+.....+ .+.+.++++.+.... .+.++...... +..+ +.. .+.+.
T Consensus 66 ~i~~~~~~--~i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGE--ILYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCC--EEeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 99864322 11111223 234444444433221 11121110000 0000 000 00000
Q ss_pred ---------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 711 ---------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 711 ---------~~~~a~el~~~L~~~-~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
......++.+.+ .. .+ ...+.+ ..+..++||.|+|+|||.|++.+++.++ ++++.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 001122333333 21 11 123554 4567899999999999999999999998 67899999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||.+||+.++.
T Consensus 213 -~~nD~~m~~~~~~ 225 (256)
T TIGR00099 213 -GMNDIEMLEAAGY 225 (256)
T ss_pred -cHHhHHHHHhCCc
Confidence 9999999999965
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-17 Score=175.90 Aligned_cols=246 Identities=19% Similarity=0.153 Sum_probs=167.0
Q ss_pred CCCEEEEeCC-ccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDy-hL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+|++|++ ...++..+.+. . +.++.+.+|..++..... ..+........+..+|.+.+.+....+.+.+ .
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~ 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLK----L 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHH----h
Confidence 4699999998 44444444433 3 788999999877532211 1111112233455788888887765555443 1
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
.+. ...++.++|+|+|...+.+....+ . .+ ....++.+|+++||+.+.||+..+++|++.+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEEP-----L-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccchh-----h-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 111 135788999999998776542110 0 00 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 450 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~ 450 (918)
+++++ +.|+++|. ++....++ +++.+.+.. ..|. +.|.+ +++..+|+.||++|+||..
T Consensus 216 ~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGD-----GPLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcC-----CccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77665 45776664 22222333 444444321 1244 45664 4688999999999999999
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH---HHHHHHhcC
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 508 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA---~ai~~aL~m 508 (918)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 899999999998888 5679999999999994 555555543
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.8e-17 Score=173.72 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=118.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc-C---ceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l-~---l~lia 647 (918)
++++|+|+||||++. +..++++++++|++|.+ . +.++++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999976 45689999999999995 4 999999999999998888874 1 47899
Q ss_pred eCceEEEecCCeeeee--ccccCChHHHHHHHHHHHHHHhc-----CCCceeeeccceEEEEe--eccChh----hh---
Q 002468 648 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 711 (918)
Q Consensus 648 enGa~i~~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~--- 711 (918)
+||+++...+ ++... ++...+.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998543 33221 11112222223333333322111 12344443322222221 111101 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecC---CCCcH
Q 002468 712 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKDE 785 (918)
Q Consensus 712 --~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~---d~nDe 785 (918)
.....++.+.+ ...+....+.+. .|..++||.++|+|||.||+.|+ . +++++||||. +.||.
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 01112333444 332333234333 34589999999999999999998 2 6899999994 49999
Q ss_pred HHHHHc
Q 002468 786 DVYAFF 791 (918)
Q Consensus 786 dMf~~~ 791 (918)
+||+.-
T Consensus 218 eMl~~~ 223 (245)
T PLN02423 218 EIFESE 223 (245)
T ss_pred HHHhCC
Confidence 999763
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=174.55 Aligned_cols=184 Identities=14% Similarity=0.097 Sum_probs=120.1
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC---ceEEeeCc
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 650 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~---l~liaenG 650 (918)
+|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+...+..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~--------------~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCC--------------CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 5899999999976 22345559999999986 699999999999999999999885 46999999
Q ss_pred eEEEec-CCe-e---eeeccccCChHHHHHHHHHHHHHHhcCCC-ceeee-----------------------ccceEEE
Q 002468 651 MFLRCT-TGK-W---MTTMPEHLNMEWVDSLKHVFEYFTERTPR-SHFEQ-----------------------RETSLVW 701 (918)
Q Consensus 651 a~i~~~-~~~-w---~~~~~~~~~~~w~~~v~~il~~~~~~~~G-s~iE~-----------------------K~~sl~~ 701 (918)
+.+... ... + .... ...+ | +.+.++++.......- ..... +.....+
T Consensus 66 a~i~~~~~~~~~~~~~~~~-~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEELWREEPGYPRII-LGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCcccccCCCceEEe-cCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 999852 111 1 0010 1112 2 3344444432221000 00000 0011111
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCC
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 781 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d 781 (918)
... .+++ ...++.+.+ .. .++.+..+..++||.|++++||.|+++++++++ ++++++++||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 0111 112222233 21 245666677899999999999999999999998 67899999999 9
Q ss_pred CCcHHHHHHcCc
Q 002468 782 GKDEDVYAFFEP 793 (918)
Q Consensus 782 ~nDedMf~~~~~ 793 (918)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999864
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=173.78 Aligned_cols=181 Identities=15% Similarity=0.211 Sum_probs=119.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENG 650 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenG 650 (918)
|+||+|+||||++. +..+++++.++|++|++ +|+.|+|+|||++..+...+..++ .++|++||
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NG 66 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENG 66 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccC
Confidence 79999999999975 45689999999999987 799999999999999999988884 47999999
Q ss_pred eEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002468 651 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 730 (918)
Q Consensus 651 a~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 730 (918)
+.+...++. ....+ ....|........ .+....-...+ ......+... ... ...+...+ .. .
T Consensus 67 a~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~----~ 128 (215)
T TIGR01487 67 GVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE----R 128 (215)
T ss_pred cEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----C
Confidence 999864332 11111 1111211000000 00000000000 0111111111 111 11222233 21 2
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 731 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 731 ~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.+..+...+||.|.+++||.++++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 129 ~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~ 184 (215)
T TIGR01487 129 GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGF 184 (215)
T ss_pred CeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCC
Confidence 45666566789999999999999999999998 56789999999 9999999999975
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-16 Score=178.65 Aligned_cols=240 Identities=13% Similarity=0.009 Sum_probs=159.0
Q ss_pred CCCCEEEEeCCccch--HHHHHHhhCCCCeEEEEEcCCCCChhhhh-cC---CC----hHHHHHHH-HhCCEEeEeCHHH
Q 002468 211 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHR-TL---PS----RSDLLRAV-LAADLVGFHTYDY 279 (918)
Q Consensus 211 ~~~DiIwvHDyhL~l--lp~~lr~~~~~~~I~~flH~PfPs~e~fr-~l---P~----~~~ll~~l-l~aDlIgf~t~~~ 279 (918)
...|+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+ .+. .. +. ...+.+.+ -.+|.|...+...
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~ 176 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAM 176 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 356999999877532 233332333467888888875321 110 00 10 01112222 3478888888765
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCH
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi 359 (918)
.+.+.+ ..+ .. +.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||+
T Consensus 177 ~~~l~~----~~g------------~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 177 QHELDQ----NWG------------IR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHH----hcC------------CC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCH
Confidence 554322 111 11 67889984 5777653211 1111 1244678899999999999
Q ss_pred HHHHHHHHHHHH-----------------hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 360 PQKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 360 ~~~L~Af~~ll~-----------------~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
..+++|+..+.. .+|+ +.|+++|. |++..+++ +.+.+.+. ..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~----~~~~~~~l-------~~v 288 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYE----EKISRLNL-------RHV 288 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHH----HHHHHcCC-------Cce
Confidence 999999988742 2454 66887763 45444444 44444322 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECC---CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHH
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITE 497 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~S---l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~ 497 (918)
+++.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~ 362 (371)
T PLN02275 289 AFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSE 362 (371)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHH
Confidence 77777899999999999999999853 2489999999999994 899999999988888 67899996 6999
Q ss_pred HHHHHHHHh
Q 002468 498 VANAIARAL 506 (918)
Q Consensus 498 lA~ai~~aL 506 (918)
+|++|.++|
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998875
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.9e-16 Score=174.65 Aligned_cols=195 Identities=21% Similarity=0.293 Sum_probs=146.0
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccc--cCCHHHHHHHHHHHHHh-CcCccCcE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 380 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~--~KGi~~~L~Af~~ll~~-~P~~~~kv 380 (918)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 47889999999988754311 1223333 34566666666654 89999999999987665 34 35
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCccCChhHHH
Q 002468 381 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 459 (918)
Q Consensus 381 ~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~-~~el~aly~~ADv~vv~Sl~EG~nLv~lE 459 (918)
.++++|... ... . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~--~----~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEI--P----P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhh--h----c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 677666421 100 0 0 111 1244 568888 88999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 002468 460 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 536 (918)
Q Consensus 460 amA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~f 536 (918)
||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++|++|.++++.+ +++.++.++.++.+ ..+++...++.+
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99994 899999999998888 34799999999999999999999865 45666777777777 468888888888
Q ss_pred HHHHH
Q 002468 537 VSELN 541 (918)
Q Consensus 537 l~~l~ 541 (918)
++-++
T Consensus 359 ~~~y~ 363 (365)
T cd03825 359 LSLYE 363 (365)
T ss_pred HHHHh
Confidence 76554
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.7e-17 Score=175.38 Aligned_cols=181 Identities=16% Similarity=0.128 Sum_probs=121.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa 651 (918)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999862 2133468999999987 699999999999999999999885 479999999
Q ss_pred EEEecCCe------eeeeccccCChHHHHHHHHHHHHHHhcCCCcee--ee----------------------ccceEEE
Q 002468 652 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ----------------------RETSLVW 701 (918)
Q Consensus 652 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E~----------------------K~~sl~~ 701 (918)
++...++. |... ...+ .+.+.++++.+....+..+. .. ......+
T Consensus 66 ~i~~~~~~~~~~~~~~~~--~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIA--LGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEEEE--cCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99864332 2111 1122 25556666544332111110 00 0000000
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCC--CceEEEEec
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGH 779 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~--~d~vlaiGD 779 (918)
.+ +++ ....+.+.+ . ...+.+..+..++||.|++++||.|+++++++++ ++ .+++++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 111222222 1 1245666666799999999999999999999998 56 899999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||++||+.++.
T Consensus 203 -~~ND~~Ml~~ag~ 215 (256)
T TIGR01486 203 -SPNDLPLLEVVDL 215 (256)
T ss_pred -CHhhHHHHHHCCE
Confidence 9999999999975
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.9e-16 Score=170.56 Aligned_cols=184 Identities=14% Similarity=0.167 Sum_probs=123.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. ...+++.++++|++|.+ .|..|+|+|||+...+...+..++ .++|+.|
T Consensus 4 ~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 689999999999985 23567889999999986 699999999999999999999885 3799999
Q ss_pred ceEEEecCC--------------eeeeeccccCChHHHHHHHHHHHHHHhcCCCc--eeee-------------------
Q 002468 650 GMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQ------------------- 694 (918)
Q Consensus 650 Ga~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~------------------- 694 (918)
|+++...++ .|.... ..+ .+.+.++++.+....... ++..
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIEL--GPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEEc--CCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999985322 222111 122 234445544332211100 0000
Q ss_pred -c--cceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCC
Q 002468 695 -R--ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 771 (918)
Q Consensus 695 -K--~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~ 771 (918)
+ .....+-+ .+. ......+...+ . ..++.+..++.++||.|.+ +||.|++++++.++ +++
T Consensus 144 ~~~~~~~~~~~~--~~~---~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLW--NGS---EAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceee--cCc---hHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 0 00000000 000 01112222223 1 2246666777899999999 99999999999998 688
Q ss_pred -ceEEEEecCCCCcHHHHHHcCc
Q 002468 772 -DYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 772 -d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+++++||| +.||++||+.++.
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~ 228 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADI 228 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCe
Confidence 99999999 9999999999975
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-15 Score=173.59 Aligned_cols=266 Identities=24% Similarity=0.235 Sum_probs=188.7
Q ss_pred CCCEEEEeCCccchHHHHHHhh---CCCCeEEEEEcCC-----CC-ChhhhhcCCCh-------------HHHHHHHHhC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPSR-------------SDLLRAVLAA 269 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~---~~~~~I~~flH~P-----fP-s~e~fr~lP~~-------------~~ll~~ll~a 269 (918)
.+|||++||||+-|+|.++++. ...++.+|++|.- |+ .......||.. .-+--++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5899999999999999999996 7789999999953 33 11112234410 1223346778
Q ss_pred CEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC-------Cc----hHHHHHHHH
Q 002468 270 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-------NP----VQVHIKELQ 338 (918)
Q Consensus 270 DlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~-------~~----~~~~~~~lr 338 (918)
|.|..-++.|+..... ...|. .....+++ +..++.-|=||||.+.+.+.... .+ -.+....|+
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888888765441 11110 00011222 22466677888888776553221 00 112223355
Q ss_pred HHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc
Q 002468 339 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 413 (918)
Q Consensus 339 ~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~ 413 (918)
+.++ +.+++..|+||+..||++.+++|+..++++. ..||++|.+ + ..++..+..++.++.++
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~g---d----~~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTG---D----PELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecC---c----HHHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999986 346666653 1 25678888888887654
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-c--------
Q 002468 414 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 484 (918)
Q Consensus 414 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-g-------- 484 (918)
+. +.-..+..-...+|+.||++++||..|++||+-+++|.-+ .++|+.+.+|.++.+ .
T Consensus 351 ~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 VL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred EE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 32 2223455666789999999999999999999999999984 799999999999987 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcCC
Q 002468 485 -AGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 485 -~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
.+|+++.|.|+++++.+|.+|+..-
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y 443 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLY 443 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHh
Confidence 3689998889999999999999864
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.4e-16 Score=156.34 Aligned_cols=156 Identities=27% Similarity=0.361 Sum_probs=120.0
Q ss_pred cCCeEEEEEecccccCCHHHHHHHHHHHHHh-CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 342 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 342 ~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~-~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
.++++|+++||+++.||+..+++|+..+.++ .++ +.|+++|. ++. ...+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~----~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEY----KKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCH----HHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----ccc----cccccccccccccc------c
Confidence 5789999999999999999999999999875 555 55776662 222 22333444443321 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 498 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~l 498 (918)
.|.+ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3554 577789999999999999999999999999999999994 899999988888887 557899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 499 ANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 499 A~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
+++|.+++.++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-15 Score=169.48 Aligned_cols=274 Identities=16% Similarity=0.130 Sum_probs=171.1
Q ss_pred HHHHhhcCCCCEEEEeCCccchHHHHHHh-hCCCCeEEEEEcCCCC-ChhhhhcCCChHHHHHHHH-hCCEEeEeCHHHH
Q 002468 204 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 280 (918)
Q Consensus 204 ~~i~~~~~~~DiIwvHDyhL~llp~~lr~-~~~~~~I~~flH~PfP-s~e~fr~lP~~~~ll~~ll-~aDlIgf~t~~~~ 280 (918)
.++++..+| |+|++|.+.++ |.++.. ...++|+.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555554 88888877765 444432 2335677665554222 22222211 23344443 5899999998887
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi 359 (918)
+.|.+ +|.. .. +.++|++ +.+.+.... .......+++.+ +++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~~----~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPPE----LAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCChh----hHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2321 22 4566663 333322111 112234566666 678889999875 6889
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc---cCCC----CcccEEEeCCCCCHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR---FGTL----TAVPIHHLDRSLDFP 432 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~---~g~~----~~~pV~~~~g~v~~~ 432 (918)
..+|+||+++++++|++ .|+++| ++++. .+++++++.+.+-. |... .-..| ++.+ +..
T Consensus 247 ~~ll~A~~~l~~~~~~~----~liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v-~l~~--~~~ 311 (425)
T PRK05749 247 ELVLDAHRALLKQFPNL----LLILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDV-LLGD--TMG 311 (425)
T ss_pred HHHHHHHHHHHHhCCCc----EEEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcE-EEEe--cHH
Confidence 99999999998888875 466554 34543 12344444443221 1000 00112 2222 357
Q ss_pred HHHHHHHHccEEEE-CCCCccCChhHHHHHHhcCCCCceEEEeCCCC-chh---hccCCeEEECCCCHHHHHHHHHHHhc
Q 002468 433 ALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ---SLGAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 433 el~aly~~ADv~vv-~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG-~~~---~lg~~allVnP~D~~~lA~ai~~aL~ 507 (918)
++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...| ..+ .+..+|.++.|.|++++|++|.++++
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhc
Confidence 99999999999665 688899999999999994 7888876543 222 33356888889999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 002468 508 MSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~~~ 527 (918)
++ +.++++.++.++++.++
T Consensus 388 ~~-~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 388 DP-DARQAYGEAGVAFLKQN 406 (425)
T ss_pred CH-HHHHHHHHHHHHHHHhC
Confidence 54 57778888888888765
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-16 Score=181.31 Aligned_cols=187 Identities=15% Similarity=0.120 Sum_probs=124.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEee
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 648 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liae 648 (918)
++|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 5789999999999986 23466789999999997 699999999999999999988875 479999
Q ss_pred CceEEEecCCeee------------eeccccCChHHHHHHHHHHHHHHhcCC----------Cceeeecc-c--------
Q 002468 649 NGMFLRCTTGKWM------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE-T-------- 697 (918)
Q Consensus 649 nGa~i~~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~~~~----------Gs~iE~K~-~-------- 697 (918)
||+.+...++... .+.....+ .+.+.++++...+... +.++..+. .
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999985432100 01101122 2344444443332110 11111100 0
Q ss_pred ----------------eEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHh
Q 002468 698 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI 761 (918)
Q Consensus 698 ----------------sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l 761 (918)
+..+.+.. ++ ....++.+.+ . ...+++..|..++||. .++|||.|+++|++.+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~g-d~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~ 625 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIEG-DK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF 625 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEcC-CH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 00000000 00 1123333444 2 2256777799999999 5999999999999999
Q ss_pred CcCCCCCCCCceEEEE--ecCCCCcHHHHHHcCc
Q 002468 762 VHSKKMKTAIDYVLCI--GHFLGKDEDVYAFFEP 793 (918)
Q Consensus 762 ~~~~~~~~~~d~vlai--GD~d~nDedMf~~~~~ 793 (918)
+ ++.+.+++| || +.||.+||++++.
T Consensus 626 g------I~~~eViafalGD-s~NDisMLe~Ag~ 652 (694)
T PRK14502 626 R------LNFGNIHTFGLGD-SENDYSMLETVDS 652 (694)
T ss_pred C------CCccceEEEEcCC-cHhhHHHHHhCCc
Confidence 8 556788888 99 9999999999976
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-15 Score=163.30 Aligned_cols=188 Identities=16% Similarity=0.191 Sum_probs=124.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
+|+||+|+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 489999999999986 23567889999999997 699999999999999999999885 4899999
Q ss_pred ceEEEecCCeeeee-c-cc---cCChHH-------HHHHHHHHHHHHhcCC------------------Ccee------e
Q 002468 650 GMFLRCTTGKWMTT-M-PE---HLNMEW-------VDSLKHVFEYFTERTP------------------RSHF------E 693 (918)
Q Consensus 650 Ga~i~~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~~~~------------------Gs~i------E 693 (918)
|+.|..... |... . +. ..+..| ...++.+++....... |.-. .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 3200 0 00 001111 2334444433322211 1111 1
Q ss_pred eccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 002468 694 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 752 (918)
Q Consensus 694 ~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p------------------~---gvnKG~ 752 (918)
.+++|-.+++...+... .+.+ ...++.++.|..++.+.. . +.+||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 23344445554322111 2222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 753 ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|++.|.+.+.-.. . .=.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~~---~-~~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRHL---G-PIKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhcc---C-CceEEEecC-ChhhHHHHHhCCe
Confidence 9999999886210 1 126899999 9999999999976
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.5e-16 Score=178.92 Aligned_cols=199 Identities=16% Similarity=0.212 Sum_probs=124.1
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHH-HHhhcCCCCcEEEEcCCChhhHHHHhccc----
Q 002468 567 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY---- 641 (918)
Q Consensus 567 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---- 641 (918)
+..+.+.||++|+||||++..+ ...+++....+| +++.+ .+..++++|||++..+.++.+.+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~ 70 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLT 70 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCC
Confidence 3456788999999999997621 224665555555 87775 68999999999988877776555
Q ss_pred CceEEeeCceEEEecCC-----eeeeeccccCChHHHH-HHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHH
Q 002468 642 NLWLAAENGMFLRCTTG-----KWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQA 715 (918)
Q Consensus 642 ~l~liaenGa~i~~~~~-----~w~~~~~~~~~~~w~~-~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 715 (918)
+..+|+.||+.|...+. .|.... +..|.. .+.+.+..+.........+.+...+.+++... ......
T Consensus 71 p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~---~~~~~~ 143 (413)
T PLN02382 71 PDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK---KAQEVI 143 (413)
T ss_pred CCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH---HhHHHH
Confidence 34588889999975321 122111 122321 12222222211111122333444555554321 111122
Q ss_pred HHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 716 RDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 716 ~el~~~L~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.++.+.+ .. ....+.+ .++..++||.|+++|||.||+.|+++++..+ ++++.+++||| +.||++||+.++
T Consensus 144 ~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGD-s~NDleMl~~ag 214 (413)
T PLN02382 144 KELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG---KAPVNTLVCGD-SGNDAELFSVPD 214 (413)
T ss_pred HHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC---CChhcEEEEeC-CHHHHHHHhcCC
Confidence 3333333 21 1123443 4678899999999999999999999982111 67899999999 999999999986
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=162.19 Aligned_cols=186 Identities=16% Similarity=0.165 Sum_probs=117.4
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liaenGa 651 (918)
+||+|+||||++. . .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------G-YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCC--------------C-CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 5899999999984 1 245679999999997 6999999999999999999888864 79999999
Q ss_pred EEEecCC-------------eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeee---ccceEEEEeeccChhhh----
Q 002468 652 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEFG---- 711 (918)
Q Consensus 652 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~---K~~sl~~hyr~ad~e~~---- 711 (918)
.|..... ... +.....+ .+.++++++...+..+-.++.. ...+ .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9985321 110 1111122 2344454443332111111100 0000 0000000000
Q ss_pred ------------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 712 ------------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 712 ------------~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
.....++.+.+ . ...+.++++..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC
Confidence 01112233333 1 2356778887778874 4999999999999998621 24568999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||++||+++..
T Consensus 208 -~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 -SENDFPMFEVVDL 220 (225)
T ss_pred -CHHHHHHHHhCCC
Confidence 9999999999965
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.4e-15 Score=160.73 Aligned_cols=187 Identities=18% Similarity=0.292 Sum_probs=117.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc----CceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l----~l~lia 647 (918)
++||++|+||||++. +..-..++.+.++ ....++..++++|||+...+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 689999999999921 1122356667776 334568889999999999999888865 457999
Q ss_pred eCceEEEecCCeeeeec--cccCChHHH-HHHHHHHHHHHhcCCCcee----eeccceEEEEeeccChhhhHHHHHHHHH
Q 002468 648 ENGMFLRCTTGKWMTTM--PEHLNMEWV-DSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 720 (918)
Q Consensus 648 enGa~i~~~~~~w~~~~--~~~~~~~w~-~~v~~il~~~~~~~~Gs~i----E~K~~sl~~hyr~ad~e~~~~~a~el~~ 720 (918)
++|+.|.... .|.... .......|. +.+.+++..+ ++... +...+.+++.+...+.. ....++.+
T Consensus 67 svGt~I~~~~-~~~~d~~w~~~i~~~w~~~~v~~~l~~~----~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 67 SVGTEIYYGE-NWQPDEEWQAHIDERWDRERVEEILAEL----PGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp TTTTEEEESS-TTEE-HHHHHHHHTT--HHHHHHHHHCH----CCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred cCCeEEEEcC-CCcChHHHHHHHHhcCChHHHHHHHHHh----hCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 9999998622 332110 011122343 3344444433 33222 22334455555543322 12344555
Q ss_pred HHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 721 HLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 721 ~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
.+ .. ....+.++. +...++|.|++++||.||+.|+++++ ++.+.++++|| +.||.+||...
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 55 22 123455554 67889999999999999999999998 67899999999 99999999554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-14 Score=152.60 Aligned_cols=185 Identities=17% Similarity=0.196 Sum_probs=142.1
Q ss_pred HHHhccccCC--Cc-eeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH
Q 002468 288 TRILGFEGTP--EG-VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL 363 (918)
Q Consensus 288 ~r~lg~~~~~--~~-i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L 363 (918)
.|+++++++. ++ ++-.-...+|.++||-|+++.|.|.+.. +. .+...|+.++||.|+||++.++
T Consensus 147 d~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~ 214 (426)
T KOG1111|consen 147 DRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLL 214 (426)
T ss_pred CcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHH
Confidence 4555555542 22 2322345689999999999999985431 12 3457899999999999999999
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
..+.++.+++|+.+ ++++| |||..-.|++.+++. +. ..+|. +.|.++++++...|...||
T Consensus 215 ~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 215 EIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred HHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcE
Confidence 99999999999854 77664 667655566555544 11 13566 5799999999999999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcC
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 508 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m 508 (918)
|+.||+.|.||++++||+.|+ .++|.+..+|..+.|.++-+...+-.++++++++.++++.
T Consensus 275 FlntSlTEafc~~ivEAaScG----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCG----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCC----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 999999999999999999994 7888889999999995453445566788999999888863
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-12 Score=149.18 Aligned_cols=263 Identities=17% Similarity=0.135 Sum_probs=160.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH-HHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
++.++|.+..-...+... .+..++++-+|=-|+.... .-+....+ -..+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 566888876544444333 4456666654433322110 00111111 22345789998887765543211
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
.+ .++.++|+|+|.+.|.+....+.. .+.+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 ------------~~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 ------------LN--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred ------------CC--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 11 357789999999999764322110 0111 124678999999999966654 44443 3
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 449 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl- 449 (918)
+.+|++ .|++||... ... +. .++ .. ...|+ +.|.++.+++.++|+.|||+++|+.
T Consensus 228 ~~~p~~----~~vliG~~~--~~~---~~----~~~----~~------~~nV~-~~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDW----SFVLIGPVD--VSI---DP----SAL----LR------LPNVH-YLGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCC----EEEEECCCc--Ccc---Ch----hHh----cc------CCCEE-EeCCCCHHHHHHHHHhCCEEecCCcc
Confidence 457876 477676420 000 00 111 00 12365 5789999999999999999999986
Q ss_pred ----CccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 450 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 450 ----~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
.+++++..+|||||+ .|+|.|....+.+.. .+ ..+.+.|+++++++|.++|..+..++..+. ...+.
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~~-~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-DE-VVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-Cc-EEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 788888765544332 33 444467999999999998765543333322 22678
Q ss_pred hcCHHHHHHHHHHHHH
Q 002468 526 THTAQEWAETFVSELN 541 (918)
Q Consensus 526 ~~~~~~W~~~fl~~l~ 541 (918)
.|||..=++.++..|.
T Consensus 355 ~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 355 QNSWDARAAEMLEALQ 370 (373)
T ss_pred HCCHHHHHHHHHHHHH
Confidence 8888887777775554
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.6e-12 Score=142.49 Aligned_cols=215 Identities=10% Similarity=0.056 Sum_probs=137.9
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 344 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 344 (918)
.+|.+...+....+.+.. .|. ...+|.+++++||.+.+.+. + ....+|+++ +++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578888766554333321 122 23467778889987544321 1 122355555 367
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHh----CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~----~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
++|+++||....|++..+++++..++.. .|+ +.++.+++ +++ .+++++++... + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G----~~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICG----RNK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEEC----CCH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 233 33333442 122 22333433210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCC-----CCchhhccCCeEEECCCCH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 495 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~-----aG~~~~lg~~allVnP~D~ 495 (918)
.|+ +.|+++ ++..+|++||++|.+| .+++++|||||+ .|+|++.. .|.++.+-++|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 354 567774 7999999999999866 378999999995 89999985 2334444123333345899
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 002468 496 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 537 (918)
Q Consensus 496 ~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 537 (918)
++++++|.++|.+.++.++++.+++++....+....-++..+
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999999999999745567777777777776666555554444
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9e-12 Score=142.78 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=168.7
Q ss_pred HHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--
Q 002468 264 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 341 (918)
Q Consensus 264 ~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 341 (918)
+....+|.+.-.++-..+.|.. .+..++. ..+.+...+||.+.+.+...... .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 3456678776555544444432 2222221 11455666788776653211100 00011111111
Q ss_pred -cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcC-CCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 342 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 342 -~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~p-sr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
..+.++..+-|..|-||+...|.||..+...-|+.. ....++..+.+ +-+..++..++.+++.+++++.+.. |
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C---
Confidence 236788999999999999999999999988775411 12455545533 2233445555667777787775321 2
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHH
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 496 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~ 496 (918)
.+++|....++.+.+.+++.+.+.++++..|-||+|++|||||+ .|+|++..+|.+|.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 34556678888888899999999999999999999999999995 899999999999998 789999999 666
Q ss_pred ---HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Q 002468 497 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDT 543 (918)
Q Consensus 497 ---~lA~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|.++..++. .+.+++++.+++|.+ |++ +.|.+.+...
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~ 464 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASV 464 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHH
Confidence 59999999999764 588888899999977 655 4454444443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-11 Score=129.18 Aligned_cols=197 Identities=25% Similarity=0.336 Sum_probs=141.4
Q ss_pred EEEEeeCCcChhhhhhh-hcCCchHHHHHHHHHHhcC--CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 308 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 308 ~v~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
++.++|+|+|++.+... .. ...+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 57788999999988742 10 0112 36899999999999999999999998877665 45666
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhc
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~ 464 (918)
+|..... ...+. +++.+.+.. ..|. +.|.++.+++..+|+.||++++||..||||++++|||||+
T Consensus 236 ~g~~~~~----~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELE----KLAKKLGLE------DNVK-FLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHH----HHHHHhCCC------CcEE-EecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 12222 233333221 1344 4788888899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 465 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 465 ~~~~g~lIlSe~aG~~~~lg~~--allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.++......++.+ ..+++..-+..++.-+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 789999999888888443 77888889999999999999987 34444444344444 46666555554444443
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.6e-10 Score=126.98 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=160.3
Q ss_pred HHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHH
Q 002468 203 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 282 (918)
Q Consensus 203 a~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~ 282 (918)
..++++..+ .|+|+.| +....++.+.+....++|+...+ +-|-.. ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~-pD~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~~--------~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEK-PDIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCLH--------KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhC-cCEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCCC--------ccccc---CCCCEEEECCHHHHHH
Confidence 344444444 5898885 55566776666656667765333 222110 01111 1578888877655444
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc---CCe-EEEEEecccccCC
Q 002468 283 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 358 (918)
Q Consensus 283 Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vIl~VdRLd~~KG 358 (918)
+.+ .|.. ..++.++++.++. .|.... + ...++++++ +++ +++..|++...||
T Consensus 162 l~~-----~gi~-----------~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGVP-----------PEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCCC-----------hhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 1221 2244444333332 343211 1 112445552 444 4556799999999
Q ss_pred HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002468 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438 (918)
Q Consensus 359 i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 438 (918)
+..+++++.. .|+ +.++++++. +.+ +++++++++...+ ..|++ .|+++ ++..+|
T Consensus 218 ~~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~~--~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYVE--NIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eechh--hHHHHH
Confidence 9999888742 354 446655532 222 3344555543322 13654 47764 588999
Q ss_pred HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHH
Q 002468 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEER 513 (918)
Q Consensus 439 ~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-~aG~----~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er 513 (918)
+.||++|. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|+++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999995 7888876 4442 122333455556789999999999999864 456
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 002468 514 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 545 (918)
Q Consensus 514 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 545 (918)
+++.++.++....+++...++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666666767777888888877776655433
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-10 Score=119.88 Aligned_cols=118 Identities=27% Similarity=0.319 Sum_probs=85.1
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCC
Q 002468 349 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 428 (918)
Q Consensus 349 ~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 428 (918)
++||+.+.||+..+++|+..+.+++|+ +.++++|... +. . .....+ ... +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~--~~-~--~~~~~~----~~~----~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGP--ER-E--YLEELL----AAL----LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCC--Ch-H--HHHHHH----Hhc----CC--cccEEE-eCC
Confidence 999999999999999999999888776 5577777432 11 1 111111 111 11 124654 456
Q ss_pred C-CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEE
Q 002468 429 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 490 (918)
Q Consensus 429 v-~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allV 490 (918)
+ +.+++..+++.||++++||..|||+++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666666677999999999999999999999994 899999999988766 3456553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.3e-10 Score=125.68 Aligned_cols=241 Identities=16% Similarity=0.139 Sum_probs=147.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|+.|.....+ +..+..+..+.|+.++.|..||. .. +.+ ....+|.|...++...+. +
T Consensus 89 ~pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~--~~~~~~~vi~~s~~~~~~--------~ 149 (350)
T cd03785 89 KPDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRL--LARFADRVALSFPETAKY--------F 149 (350)
T ss_pred CCCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHH--HHHhhCEEEEcchhhhhc--------C
Confidence 36999998755433 33333344467776655544432 10 111 112367777766543221 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHH-HHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKL-LAFE 367 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L-~Af~ 367 (918)
...++.++|+|+|.+.|.+.. . ++++ +++++|+.+++....|+...++ .|++
T Consensus 150 -------------~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~ 205 (350)
T cd03785 150 -------------PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEAVPEALA 205 (350)
T ss_pred -------------CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 124677899999988765321 0 2222 3677888898888888887655 7777
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+ ++ +.++.++++ + +.+++++ .+.+. + ..|+ +.+.+ +++..+|+.||++|.+
T Consensus 206 ~l~~--~~----~~~~~i~G~----g-~~~~l~~----~~~~~----~----~~v~-~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 206 ELLR--KR----LQVIHQTGK----G-DLEEVKK----AYEEL----G----VNYE-VFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred Hhhc--cC----eEEEEEcCC----c-cHHHHHH----HHhcc----C----CCeE-Eeehh--hhHHHHHHhcCEEEEC
Confidence 6642 22 333333322 2 2233443 33322 1 1244 45665 7899999999999987
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHhcCCHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMSPEEREK 515 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG--------~~~~l--g~~allVnP~--D~~~lA~ai~~aL~m~~~er~~ 515 (918)
| | +.+++|||+|+ .|+|++...| .++.+ +..|++|+|. |.++++++|..+|.. ++.++.
T Consensus 260 s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~ 330 (350)
T cd03785 260 A---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKA 330 (350)
T ss_pred C---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHH
Confidence 7 3 57899999994 7888876543 13444 3568999987 999999999999974 456666
Q ss_pred HHHHHHHHHHhcCHH
Q 002468 516 RHWHNFTHVTTHTAQ 530 (918)
Q Consensus 516 r~~~~~~~v~~~~~~ 530 (918)
+..+.++++..+...
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (350)
T cd03785 331 MAEAARSLARPDAAE 345 (350)
T ss_pred HHHHHHhcCCCCHHH
Confidence 667777766554433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.4e-10 Score=126.42 Aligned_cols=251 Identities=16% Similarity=0.075 Sum_probs=157.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|+.|+....+.+.++ .+..+.|+.++.|..+|.. .+.++ ...+|.+...+++- +. .
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 3699999985544443433 3445678877666544320 01111 12456555444311 10 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH-HHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 369 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L-~Af~~l 369 (918)
....++.++|+|||.+.+.+. ... .++ .. ++.++|+.+|+....|++..++ +|++++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~----~~~---~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALA----APP---ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhccc----chh---hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 123578899999998766531 100 111 12 3678889999999999987777 888776
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
... | ..++++|. ++ .+++.+.+ . . +. . |. +.+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~----~~---~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-A----GI---N-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-c----CC---c-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555543 22 12222222 1 1 11 1 43 45665 68899999999999987
Q ss_pred CccCChhHHHHHHhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 002468 450 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 517 (918)
Q Consensus 450 ~EG~nLv~lEamA~~~~~~g~lIlSe~aG--------~~~~l--g~~allVnP~D--~~~lA~ai~~aL~m~~~er~~r~ 517 (918)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.++|++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 7888775432 12334 35688998888 99999999999997 45677777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 002468 518 WHNFTHVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 518 ~~~~~~v~~~~~~~W~~~fl~~l 540 (918)
++.+++...++...-++.+++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHh
Confidence 77777777777777777666544
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.6e-10 Score=124.27 Aligned_cols=181 Identities=16% Similarity=0.132 Sum_probs=117.9
Q ss_pred EEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH-HHHHHHHHhCcCccCcEEEEEEEc
Q 002468 310 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 310 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L-~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.++|+|||...+.+.. + .+.+ .+ ++.++|+++||....|++..++ .|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 5889999976654321 0 0111 12 3677899999998899976654 788776542 22 2333332
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 467 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~ 467 (918)
+++. . ++++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~----~l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-H----HHHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 2 33344333221 1233232 2 37899999999999875 4 68999999994
Q ss_pred CceEEEeCCCCc-------hhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 002468 468 KGVLILSEFAGA-------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 468 ~g~lIlSe~aG~-------~~~l--g~~allVnP~D--~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 534 (918)
.|+|++...|. ++.+ +.+|++++|.| +++++++|.++++. ++.++++.++.++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 78888876552 2344 46789999876 99999999999975 4567777777777777666655543
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.18 E-value=4e-09 Score=119.95 Aligned_cols=241 Identities=15% Similarity=0.138 Sum_probs=141.4
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHH--hCCEEeEeCHHHHHHHHHHHHHH
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
.|+|++|......+...+-....++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR----- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH-----
Confidence 5999999544443433333334467876532211 1111111 12223322222 257766677766666543
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCc-ChhhhhhhhcCCchHHHHHHHHHHhc-CCeEEEE-Eeccc-ccCCHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA-GRKVMLG-VDRLD-MIKGIPQKLLAF 366 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vIl~-VdRLd-~~KGi~~~L~Af 366 (918)
+|. ...+|.++++|+ |...+.... . ....++++++ ++.+++. ..|.. ..||+..+++|+
T Consensus 159 ~G~-----------~~~~I~vign~~~d~~~~~~~~-~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~ 221 (365)
T TIGR00236 159 ENV-----------KADSIFVTGNTVIDALLTNVEI-A-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAI 221 (365)
T ss_pred cCC-----------CcccEEEeCChHHHHHHHHHhh-c-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHH
Confidence 132 235788999996 543222111 0 1123444453 3345555 44643 459999999999
Q ss_pred HHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002468 367 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 446 (918)
Q Consensus 367 ~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv 446 (918)
.++.+++|++ .++.++.|. +. .+.++ ...++ . ...|+ |.+.+...++..+|+.||+++.
T Consensus 222 ~~l~~~~~~~----~~vi~~~~~----~~---~~~~~---~~~~~----~--~~~v~-~~~~~~~~~~~~~l~~ad~vv~ 280 (365)
T TIGR00236 222 REIVEEFEDV----QIVYPVHLN----PV---VREPL---HKHLG----D--SKRVH-LIEPLEYLDFLNLAANSHLILT 280 (365)
T ss_pred HHHHHHCCCC----EEEEECCCC----hH---HHHHH---HHHhC----C--CCCEE-EECCCChHHHHHHHHhCCEEEE
Confidence 9998888875 355444332 11 12222 22221 1 12355 5678899999999999999998
Q ss_pred CCCCccCChhHHHHHHhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCC
Q 002468 447 TSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 447 ~Sl~EG~nLv~lEamA~~~~~~g~lIlS-e~aG~~~~l-g~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...+++| |.|+++++++|.++|+.+
T Consensus 281 ~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 281 DS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred CC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 88 45689999994 788886 455555544 2345666 589999999999999854
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-08 Score=120.56 Aligned_cols=149 Identities=15% Similarity=0.115 Sum_probs=109.7
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHH--hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~--~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
+..+|..|.|+...||+..++.+++++++ ++|+. .+.+|..|.+...+... +++.+.+..++.+- .|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~~--~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKRP--EFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhcc--cCC----C
Confidence 45688899999999999999999999975 55552 47888777654443222 34555665555430 021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 492 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv-~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP---- 492 (918)
.|.++.+ .+..--..+|..||+++. ||. +|..|+.=+=||.- |.|.+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 4665554 455555678999999999 887 99999999999985 788888887776654 568999985
Q ss_pred --------CCHHHHHHHHHHHh
Q 002468 493 --------WNITEVANAIARAL 506 (918)
Q Consensus 493 --------~D~~~lA~ai~~aL 506 (918)
.|.+++-++|.+++
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred cccccccCCCHHHHHHHHHHHH
Confidence 88899999998877
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.1e-09 Score=118.42 Aligned_cols=244 Identities=15% Similarity=0.061 Sum_probs=141.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|.+....++..+..+..++|+.++.|--. +.+ +..|+...-....-.+|++...+....+++.+ .
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~-----~ 159 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ-----E 159 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHHHHhhhccCCCHHHHHHHHH-----c
Confidence 469999998766656555544445788876554211 000 01122110000112356555555444443322 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCeEEEEEecccc---cCCHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKLL 364 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~vIl~VdRLd~---~KGi~~~L~ 364 (918)
|. ...+|.++++++ |...+....... ...++.+ + ++.+++.++|+.. .||+..+++
T Consensus 160 G~-----------~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 160 GE-----------PPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred CC-----------CcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 21 345678888885 654443221110 0111222 2 3456778999875 799999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|++.+... ++.++..+. .+.+..++ +.+.+.+.. ...|+ +.+....+++..+|+.||++
T Consensus 223 al~~l~~~------~~~vi~~~~-----~~~~~~l~----~~~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 223 ALAELAEE------DVPVVFPNH-----PRTRPRIR----EAGLEFLGH-----HPNVL-LISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHhc------CCEEEEECC-----CChHHHHH----HHHHhhccC-----CCCEE-EECCcCHHHHHHHHHcCcEE
Confidence 99887432 244443322 22233333 333333210 01354 45667789999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHhcCCH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 510 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~-D~~~lA~ai~~aL~m~~ 510 (918)
|.+|- | +..|||+|+ .|+|++...+....+..+|+.+.+. |+++++++|.++|+++.
T Consensus 282 v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 282 LTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 99994 4 479999994 7888887655454443566555443 79999999999998753
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=115.88 Aligned_cols=191 Identities=17% Similarity=0.226 Sum_probs=116.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc---CceEEe
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 647 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---~l~lia 647 (918)
..++||+|+||||++..-+| +.....|.+|.. .|..|+.||..+..++..+-+.+ +..+|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35799999999999964333 234566777774 69999999999999998877776 478999
Q ss_pred eCceEEEecCCeeeeec--c------ccCCh-HHHHHHHHHHHHHHhcCCCceee----------------------ecc
Q 002468 648 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 696 (918)
Q Consensus 648 enGa~i~~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~~~~Gs~iE----------------------~K~ 696 (918)
|||+.|..+. .|...- + ..... .-.+.+++.++...+...-.++. .++
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998432 222100 0 00000 11233444443332211111110 111
Q ss_pred ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEE
Q 002468 697 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 776 (918)
Q Consensus 697 ~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vla 776 (918)
++.++-.+..| +.+.++ ...+...++.+++|....-|....-.||.|++.+++.+..- ....-++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEEEe
Confidence 11111111111 111111 22223347899999888888877778999999999977521 12334899
Q ss_pred EecCCCCcHHHHHHcCc
Q 002468 777 IGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 777 iGD~d~nDedMf~~~~~ 793 (918)
+|| +.||.+||+.+..
T Consensus 215 ~GD-g~nD~Pl~ev~d~ 230 (274)
T COG3769 215 LGD-GPNDAPLLEVMDY 230 (274)
T ss_pred cCC-CCCcccHHHhhhh
Confidence 999 9999999998755
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.7e-09 Score=118.58 Aligned_cols=261 Identities=11% Similarity=0.087 Sum_probs=152.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|.++ +....+..+.+....++|+.. +++-+-.... | + --.+|.+...+....+.+.+ .
T Consensus 104 kPDvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~-----~ 165 (391)
T PRK13608 104 KPDLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID-----V 165 (391)
T ss_pred CcCEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH-----c
Confidence 45888875 233333333333445677743 4444411100 1 1 12478877777654444432 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCe-EEEEEecccccCCHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
|. ...+|.++++.|+. .|..... ...+++++ ++++ +++++||+...||+..+++++
T Consensus 166 gi-----------~~~ki~v~GiPv~~-~f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~- 225 (391)
T PRK13608 166 GI-----------DPSTVKVTGIPIDN-KFETPID-------QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI- 225 (391)
T ss_pred CC-----------CHHHEEEECeecCh-Hhccccc-------HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH-
Confidence 22 12356666666664 3432211 12334444 2444 556799999999999999985
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++..|+ +.++++++. .+ ++.+++.+. ++. . ..|+ +.|++ +++..+|+.||++|..
T Consensus 226 --~~~~~~----~~~vvv~G~----~~---~l~~~l~~~---~~~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~k 280 (391)
T PRK13608 226 --LAKSAN----AQVVMICGK----SK---ELKRSLTAK---FKS----N--ENVL-ILGYT--KHMNEWMASSQLMITK 280 (391)
T ss_pred --HhcCCC----ceEEEEcCC----CH---HHHHHHHHH---hcc----C--CCeE-EEecc--chHHHHHHhhhEEEeC
Confidence 344454 345555431 22 122333332 111 0 1354 45766 5799999999999864
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh-----ccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~-----lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
+.|+++.|||||+ .|+|++...+..+. +.+.|.-+-+.|.++++++|.++++++ +.+.++.++.++
T Consensus 281 ----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (391)
T PRK13608 281 ----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQ 351 (391)
T ss_pred ----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 4589999999994 78888854322221 112333333669999999999999864 566777777788
Q ss_pred HHHhcCHHHHHHHHHHHHHHhH
Q 002468 523 HVTTHTAQEWAETFVSELNDTV 544 (918)
Q Consensus 523 ~v~~~~~~~W~~~fl~~l~~~~ 544 (918)
....++....++.+++.+....
T Consensus 352 ~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 352 DKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred hcCCCCHHHHHHHHHHHhhhhh
Confidence 8888888888888877665543
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-08 Score=107.91 Aligned_cols=308 Identities=14% Similarity=0.236 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHh---hcC-CCCEEEEe--CCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH
Q 002468 192 FAAYIKANQMFADVVNK---HYK-DGDVVWCH--DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 265 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~---~~~-~~DiIwvH--DyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ 265 (918)
|..+--.-|..+..|+. +++ ++| |||- .|.+. +|.+ |+ +.+.||+...|.|--|.+....+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 44444444444444432 244 455 5774 35443 2332 32 56899999999998888876654332111 1
Q ss_pred HHhCCEEeEeCHHHHHHHHHHHHHHhcccc---------CCCce-e-eCCeeeEEEEeeCCcChhhhhhhhcCCchHHHH
Q 002468 266 VLAADLVGFHTYDYARHFVSACTRILGFEG---------TPEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHI 334 (918)
Q Consensus 266 ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~---------~~~~i-~-~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~ 334 (918)
+...---.|-|.|..-- ...|.-. +.+-| + |+...+.+ |+|. .+++.+.....+
T Consensus 200 -----~l~~~KlaY~rlFa~lY-~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPP-C~~e~lks~~~t------- 264 (465)
T KOG1387|consen 200 -----ILVWGKLAYWRLFALLY-QSAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPP-CSTEDLKSKFGT------- 264 (465)
T ss_pred -----hhhhHHHHHHHHHHHHH-HhccccceEEEecchhhHHHHHHHhhccceeE-EcCC-CCHHHHHHHhcc-------
Confidence 11111123445553211 1112110 00111 1 22222222 3343 555544322111
Q ss_pred HHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcC--ccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhc
Q 002468 335 KELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 412 (918)
Q Consensus 335 ~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~--~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~ 412 (918)
.-+....+|+|+...|.|+.. .|+-+..++.+.|. ....+.|+++|. .|+. +-++.-+.++.++.+++-
T Consensus 265 -----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne--eD~ervk~Lkd~a~~L~i 335 (465)
T KOG1387|consen 265 -----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE--EDEERVKSLKDLAEELKI 335 (465)
T ss_pred -----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh--hhHHHHHHHHHHHHhcCC
Confidence 112456899999999999999 78888888888887 334577887764 3432 222334566777777764
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchh-hc----c-CC
Q 002468 413 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AG 486 (918)
Q Consensus 413 ~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l----g-~~ 486 (918)
. ..|. |.-.++.+++..+|..|-+.|-+-..|-||+.+.||||++ ..+|+-..+|..- .+ | .+
T Consensus 336 ~------~~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~t 404 (465)
T KOG1387|consen 336 P------KHVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETT 404 (465)
T ss_pred c------cceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccc
Confidence 3 2355 4678999999999999999999999999999999999993 3334444444332 22 4 36
Q ss_pred eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 487 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 487 allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
|++. | +.++.|++|.+++.+..+||..+.+..|..+.+++-+...++|.+.+..
T Consensus 405 GFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 405 GFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 7776 3 5678999999999999999888888889999998888877777655443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.7e-08 Score=115.95 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHhh----cCCCCEEE--EeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHh
Q 002468 195 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLA 268 (918)
Q Consensus 195 Y~~vN~~fa~~i~~~----~~~~DiIw--vHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~ 268 (918)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ -+. ....-...+..+-.
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-----~~~~y~~~l~~~~~ 272 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-----RHHTYLDLYESLSR 272 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-----cccchhhhhhChhh
Confidence 444444444444433 56788877 56666655 3333343334446665 111 00112456667778
Q ss_pred CCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEE
Q 002468 269 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVML 348 (918)
Q Consensus 269 aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl 348 (918)
+|.|...|.+-.+..... ++. .. ...+|..+|.+.- . .... ..++..++.|.+
T Consensus 273 ~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~~------------~s~r~~~~~I~v 325 (519)
T TIGR03713 273 ADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRLG------------QSQQLYETEIGF 325 (519)
T ss_pred cCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-EecC------------hhhcccceEEEE
Confidence 888777775533333221 110 00 1234556676544 1 1110 112234555666
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC----------
Q 002468 349 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT---------- 418 (918)
Q Consensus 349 ~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~---------- 418 (918)
++||| +.|-+..+|+|+.++++++|+. .|.+.|..+ . .++.+.+++++.++|..++...
T Consensus 326 ~idrL-~ek~~~~~I~av~~~~~~~p~~----~L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 394 (519)
T TIGR03713 326 WIDGL-SDEELQQILQQLLQYILKNPDY----ELKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDE 394 (519)
T ss_pred EcCCC-ChHHHHHHHHHHHHHHhhCCCe----EEEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhh
Confidence 67799 9999999999999999999985 466555432 1 1234566677777765532110
Q ss_pred -----------cc-cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c
Q 002468 419 -----------AV-PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 484 (918)
Q Consensus 419 -----------~~-pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g 484 (918)
-. ..+.|.|..+..++...|.-|.++|.+|..|||+ ..+|||+.| .|.| .-|.++.+ |
T Consensus 395 ~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V~d~ 466 (519)
T TIGR03713 395 NQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYVEHN 466 (519)
T ss_pred hhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceeeEcC
Confidence 00 2344678888889999999999999999999999 999999983 4555 66677777 8
Q ss_pred CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 002468 485 AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 529 (918)
Q Consensus 485 ~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 529 (918)
.+|++| .|..++++||...|..+. .........++.+..++.
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 899999 799999999999998753 333444445555554443
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.7e-08 Score=108.35 Aligned_cols=239 Identities=14% Similarity=0.035 Sum_probs=142.8
Q ss_pred HHhhcCCCCEEEEeCCccch--HHH-HHHh-hCCCCeEEEEEcCCCCChhhhhcCC-ChHHHHHHHHhCCEEeEeCHHHH
Q 002468 206 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 280 (918)
Q Consensus 206 i~~~~~~~DiIwvHDyhL~l--lp~-~lr~-~~~~~~I~~flH~PfPs~e~fr~lP-~~~~ll~~ll~aDlIgf~t~~~~ 280 (918)
++..++++|+|++|...++. ++. +++. +..++++++++|--+|.. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 55668899999999864432 222 2222 112699999999876532 11111 12223344557899999988765
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.+ .|.. ..++.++|+..+...... +.....++.|+++|||....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 1221 123444444332211100 01123456899999999443211
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
+..|+ +.|+++|. +++.. .. ...|+ |.|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~-----g~~~~-----------~~--------~~~V~-f~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGP-----NPEDL-----------EN--------SANIS-YKGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECC-----Ccccc-----------cc--------CCCeE-EecCCCHHHHHHHHhc
Confidence 12344 45766653 22111 00 11355 5799999999999988
Q ss_pred ccEEEECCC-----------CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 002468 441 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 441 ADv~vv~Sl-----------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~ 507 (918)
|+.+++.- .-.++--..|||||+ .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76666432 123444588999994 899999999999988 56789997 678899998874
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 002468 508 MSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~ 525 (918)
.++++.++.++.++...
T Consensus 298 -~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 298 -TEEEYQEMVENVKKISK 314 (333)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 35666666666655554
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.4e-09 Score=103.54 Aligned_cols=129 Identities=26% Similarity=0.323 Sum_probs=89.0
Q ss_pred CeEEEEEecccccCCHHHHHH-HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 344 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 344 ~~vIl~VdRLd~~KGi~~~L~-Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|+++|. +++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~-----~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGN-----GPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECE-----SS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeC-----CHH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999986 55777764 222 12222 00 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 499 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA 499 (918)
++ .|.+ +++.++|+.||+++.|+. .++++..++|||+++ .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 54 5777 689999999999999985 789999999999994 78888888 555554 2456666 89999999
Q ss_pred HHHHHHhc
Q 002468 500 NAIARALN 507 (918)
Q Consensus 500 ~ai~~aL~ 507 (918)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999986
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.8e-08 Score=110.22 Aligned_cols=150 Identities=19% Similarity=0.187 Sum_probs=97.2
Q ss_pred HHHHhc---CCeEE-EEE-ecccccCC-HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhh
Q 002468 337 LQETFA---GRKVM-LGV-DRLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 410 (918)
Q Consensus 337 lr~~~~---~~~vI-l~V-dRLd~~KG-i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~I 410 (918)
++++++ ++++| +.. +|....|+ +..+++|++.+.+++|++ .+++++. +.+. ++++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~----~~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKR----REQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----Chhh----HHHHHHHHhhc
Confidence 444453 44543 333 46666544 788999999998888764 4665542 1222 23333443322
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe----------------
Q 002468 411 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 474 (918)
Q Consensus 411 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS---------------- 474 (918)
. |. .+.++. .++..+|+.||++|++| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 11 244332 47899999999999998 78889999994 788887
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 475 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 475 -e~aG~~~~lg~----~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
.+.|.++.+.. .+++++..|+++++++|.++|+++ +.++++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 45555666622 236778889999999999999865 3455544443
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.6e-06 Score=101.56 Aligned_cols=300 Identities=17% Similarity=0.209 Sum_probs=150.2
Q ss_pred EEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCC-------ChhhhhcCCC---hHH-----------HHH-HHHhCCEE
Q 002468 215 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RSD-----------LLR-AVLAADLV 272 (918)
Q Consensus 215 iIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfP-------s~e~fr~lP~---~~~-----------ll~-~ll~aDlI 272 (918)
+.+.|.|..-+-..++|++.|.+.-.|+.|-.-+ ..++|..|+. .++ +-+ ....||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3477888877777789999999999999997533 1233444441 111 111 12334444
Q ss_pred eEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC----CchHHHHHHH-HHHh-c----
Q 002468 273 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI----NPVQVHIKEL-QETF-A---- 342 (918)
Q Consensus 273 gf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~----~~~~~~~~~l-r~~~-~---- 342 (918)
..-+.--+. .|..+|+ |...| |.|||+|.+.|...-.- ...++++.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL~------------r~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK------------RKPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHHS------------S--SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHhC------------CCCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 333321111 2333333 22222 67999999877643110 0122333332 2222 1
Q ss_pred --CCeEEE-EEeccc-ccCCHHHHHHHHHHHHH---h-CcCccCcEEEEEEEcCCCCCh---H------HHHHHHHHHHH
Q 002468 343 --GRKVML-GVDRLD-MIKGIPQKLLAFEKFLE---E-NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHE 405 (918)
Q Consensus 343 --~~~vIl-~VdRLd-~~KGi~~~L~Af~~ll~---~-~P~~~~kv~Lvqig~psr~~~---~------~y~~l~~~l~~ 405 (918)
++.+++ ..||.+ ..||++..|+|+.+|-. . ..+ ..|+.. |-.|..... + -+.+|++.+.+
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~--~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~ 365 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSD--KTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDE 365 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S---EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCC--CeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHH
Confidence 345554 499999 57999999999988743 2 222 123333 334554321 1 11233333332
Q ss_pred HHHhhhcc-----------------------------------------------------------c----CCCCcccE
Q 002468 406 IVGRINGR-----------------------------------------------------------F----GTLTAVPI 422 (918)
Q Consensus 406 lv~~IN~~-----------------------------------------------------------~----g~~~~~pV 422 (918)
+..+|..+ . ...+-+.|
T Consensus 366 i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKV 445 (633)
T PF05693_consen 366 IQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKV 445 (633)
T ss_dssp HHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEE
T ss_pred HHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEE
Confidence 22222100 0 01122344
Q ss_pred EEeCCCCC------HHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-------cCCeEE
Q 002468 423 HHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAIL 489 (918)
Q Consensus 423 ~~~~g~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-------g~~all 489 (918)
+|...+++ .-++..+.+.+|+.|+||.||++|.+++|+.|.+ .|.|.|+.+|....+ +..|+.
T Consensus 446 IF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 446 IFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp EE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred EEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCcEE
Confidence 44333332 3467888999999999999999999999999994 799999999988654 134554
Q ss_pred E-CC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 490 V-NP--WNI----TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 490 V-nP--~D~----~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
| += .+. +++|+.|.....++..+|.....+..+.....+|.+-...|..
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4 32 233 5667777777788877777666555554555555554444443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.7e-07 Score=110.24 Aligned_cols=133 Identities=19% Similarity=0.134 Sum_probs=97.6
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHH--hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~--~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
.+|.++.|+...|+...++..+++|.+ .+|+ ..+.||..|.+...+.+. +++.+++.+++..- +|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhCc--CCC----CcE
Confidence 378899999999999999999999865 3444 258888777654444321 34555555554410 221 146
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 492 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP 492 (918)
.|+.+ .+-.--..++..|||++.||. +|.-|+.=+=||.- |.|-+|-.-|.-.+. |.+|..+.+
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCC
Confidence 66554 455555678999999999999 99999999999884 899999988887766 778999988
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.51 E-value=3e-07 Score=87.61 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=48.1
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
+++||+||||++...... ......+.+.+.+.|++|.+ .|..++|+|||....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcC
Confidence 489999999998732100 00124678999999999997 589999999999999999887754
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.2e-05 Score=90.44 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.4
Q ss_pred CCeEEEE--Eecccc-cCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCc
Q 002468 343 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 419 (918)
Q Consensus 343 ~~~vIl~--VdRLd~-~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 419 (918)
++++|+. .+|..+ .|+++.+++|++.+.+++|+++ +++.+.+. ... +.++++....+ . .
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5565543 459888 7999999999999988888753 44333221 111 22223333221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC-----------------CCCchhh
Q 002468 420 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 482 (918)
Q Consensus 420 ~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-----------------~aG~~~~ 482 (918)
..|..+.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13444432 3457999999999999 77788999995 7888772 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHhcCC
Q 002468 483 L-GAGAI--LV-NPWNITEVANAIARALNMS 509 (918)
Q Consensus 483 l-g~~al--lV-nP~D~~~lA~ai~~aL~m~ 509 (918)
+ +.+++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22211 12 3347889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.43 E-value=9e-07 Score=91.91 Aligned_cols=172 Identities=18% Similarity=0.260 Sum_probs=104.9
Q ss_pred HHHHHHHhhcCCCCcEEEEcCCChhhHHHHhc-c-c---CceEEeeCceEEEecCC-eeeeeccccCChHHHHHHHHHHH
Q 002468 608 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFE 681 (918)
Q Consensus 608 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~-~-l---~l~liaenGa~i~~~~~-~w~~~~~~~~~~~w~~~v~~il~ 681 (918)
+.+.|.+|.+ +..|+||||-++.-+++.+. . + -.++-++||...+..+. .|...+.+.+..+-...+.+.+.
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899986 79999999999999988774 2 2 24799999998875443 45433311111111222222222
Q ss_pred HHHhc-----CCCceeeeccceEEEEe--eccChh----hhHH----H-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 002468 682 YFTER-----TPRSHFEQRETSLVWNY--KYADVE----FGRI----Q-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 744 (918)
Q Consensus 682 ~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~~~----~-a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~ 744 (918)
.|... .-|.+||.++..+.+.- |+|..+ |..+ . -+.+.+.| ...+...++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 22221 35899999999888753 333211 1110 0 12345555 4434556788766 57899999
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec---CCCCcHHHHHHc
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---FLGKDEDVYAFF 791 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD---~d~nDedMf~~~ 791 (918)
|+||+|.-++++|.+. ..+.+++||| -+.||.++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 2689999999 245899998764
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.8e-06 Score=78.35 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=72.6
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
|++-|+..+|+++..+|+|||+ +|+|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888899999999999994 666666677877777 55688888 9999999999999965 6888888899
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 002468 521 FTHVT-THTAQEWAETFV 537 (918)
Q Consensus 521 ~~~v~-~~~~~~W~~~fl 537 (918)
+++|. .|++.+=++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 88886 788777777665
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=7.9e-06 Score=82.46 Aligned_cols=184 Identities=18% Similarity=0.267 Sum_probs=119.8
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc--C-
Q 002468 566 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 642 (918)
Q Consensus 566 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l--~- 642 (918)
++++-..-|+.+|.||||++. ...++|++.+.|++|.. ...+-++-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 344555679999999999986 46789999999999875 7888899999888887777542 2
Q ss_pred -ceEEeeCceEEEecCCeeeeeccccCChHHH--HHHHHHHH----HHHhc----CCCceeeeccceEEEEe--eccCh-
Q 002468 643 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWV--DSLKHVFE----YFTER----TPRSHFEQRETSLVWNY--KYADV- 708 (918)
Q Consensus 643 -l~liaenGa~i~~~~~~w~~~~~~~~~~~w~--~~v~~il~----~~~~~----~~Gs~iE~K~~sl~~hy--r~ad~- 708 (918)
.+.-+|||..-...++... ...-..|. +.++++++ +..+- ..|.+||-+.-.+.+.- |++..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998765443211 11112232 23333332 22221 35888988776655432 33321
Q ss_pred ---hhhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 709 ---EFGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 709 ---e~~~-----~~a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
+|.. ..-..+.+.| .+-+...++.... |.-.++|-|.||+|--.++.+-++ + .+.+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 1211 1112344555 4334556777655 467899999999999999887554 3 688999999
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00014 Score=84.70 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
...|+|++.+.+..|+++ |=+ |.++ + +..+|.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999864 543 5433 1 11334344 22 2 23554554 45567899999
Q ss_pred HccEEEECCCCccCChhHHHHHHhcCCCCceEEEe--CCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 440 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS--e~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
.||++|.+|..||+++.+.||+.. |.+|+| ...|..+.+ ..|.+|++.|+++++++|.++|..+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 566665 455666666 55899999999999999999999774
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.6e-06 Score=85.60 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=55.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---HHhcc-------cC-
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 642 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------l~- 642 (918)
++++|+||||+..... +...+-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976210 0000000 014689999999999997 69999999999988874 67766 22
Q ss_pred ceEEeeCceEEE
Q 002468 643 LWLAAENGMFLR 654 (918)
Q Consensus 643 l~liaenGa~i~ 654 (918)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378899999875
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.7e-06 Score=81.19 Aligned_cols=38 Identities=26% Similarity=0.115 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|..++++++++++ .+++.++++|| +.||.+|++.++.
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 58889999999988 57899999999 9999999998854
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.9e-06 Score=83.86 Aligned_cols=37 Identities=24% Similarity=0.106 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|..++++++++++ .+++++++||| +.||.+|++.++.
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 6788999999988 57899999999 9999999999965
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.9e-05 Score=76.20 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=41.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhH
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 634 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 634 (918)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTY 54 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhh
Confidence 6899999999987522110 114578999999999976 6999999999998654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0068 Score=68.96 Aligned_cols=221 Identities=20% Similarity=0.239 Sum_probs=142.8
Q ss_pred ChHHHHHHHH-hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHH
Q 002468 258 SRSDLLRAVL-AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 336 (918)
Q Consensus 258 ~~~~ll~~ll-~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~ 336 (918)
.++.+.+.|+ ..|+|.-|+..+.+.|.+ ||... +..-| ..|.. |.+ .++.......
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~----v~v~G-NlKfd-----~~~--------~~~~~~~~~~ 222 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP----VVVTG-NLKFD-----IEP--------PPQLAAELAA 222 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc----eEEec-ceeec-----CCC--------ChhhHHHHHH
Confidence 3456777776 569999999999999975 55431 11111 01111 111 1233455667
Q ss_pred HHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccC
Q 002468 337 LQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 415 (918)
Q Consensus 337 lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g 415 (918)
+|.++++ +++++..+. ...--...+.++..+++++|+. .|| ++ | .-||. -..+++++.+.|-+++
T Consensus 223 ~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~----llI-lV-P---RHpER---f~~v~~l~~~~gl~~~ 288 (419)
T COG1519 223 LRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL----LLI-LV-P---RHPER---FKAVENLLKRKGLSVT 288 (419)
T ss_pred HHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc----eEE-Ee-c---CChhh---HHHHHHHHHHcCCeEE
Confidence 8888877 899999888 3333444788999999999975 233 32 3 23432 3567778877775554
Q ss_pred CCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECCC---CccCChhHHHHHHhcCCCCceEEEe----CCCCchh
Q 002468 416 TLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTSL---RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQ 481 (918)
Q Consensus 416 ~~~-------~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl---~EG~nLv~lEamA~~~~~~g~lIlS----e~aG~~~ 481 (918)
.-. -++|... . +.-||..+|+.|||+.+--. .-|.| ++|+.+|+ .|+|.- .|.-+++
T Consensus 289 ~rS~~~~~~~~tdV~l~--D-tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~ 359 (419)
T COG1519 289 RRSQGDPPFSDTDVLLG--D-TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAE 359 (419)
T ss_pred eecCCCCCCCCCcEEEE--e-cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHH
Confidence 211 1234322 1 56899999999999988543 35666 68999993 566643 4555555
Q ss_pred hc-c-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 002468 482 SL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 482 ~l-g-~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 527 (918)
.| . .+++.|+. .+.++.++..++.. +++|.++.++....+..+
T Consensus 360 ~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 360 RLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 55 2 35677764 77888888877776 678888888888888654
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.6e-06 Score=92.10 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 747 gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+-.|+.++++++++++ ++++.+++||| +.||.+|++.++.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 67899999999 9999999999853
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.68 E-value=8.4e-05 Score=80.92 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=57.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----e
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----W 644 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~ 644 (918)
...++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+++...+...++.+++ .
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 3468999999999998721 2234 5999999999997 6999999999999999888888754 3
Q ss_pred EEeeCceEEE
Q 002468 645 LAAENGMFLR 654 (918)
Q Consensus 645 liaenGa~i~ 654 (918)
.|..+|...+
T Consensus 191 vIIs~Gdv~~ 200 (301)
T TIGR01684 191 IIISGGHKAE 200 (301)
T ss_pred EEEECCcccc
Confidence 6777777655
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00029 Score=74.39 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=38.4
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..-.+-.|..+++.+++.+| ++++.++++|| +.||.+||+.+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 138 PICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 33445589999999999998 67899999999 9999999999976
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00036 Score=75.57 Aligned_cols=64 Identities=5% Similarity=0.178 Sum_probs=50.9
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHHhcccCc-----e
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 644 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~l~l-----~ 644 (918)
++|+||+||||+.. ...+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~--------------~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKG--------------KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcC--------------CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 68999999999976 2223 478999999997 6999999995 999999888887743 3
Q ss_pred EEeeCceE
Q 002468 645 LAAENGMF 652 (918)
Q Consensus 645 liaenGa~ 652 (918)
++..+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66777764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0024 Score=67.49 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHH
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 790 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~ 790 (918)
.+-.|..+++++++.++ .+.+++||| +.+|..|-+.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 34568999999998876 357999999 9999998444
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00085 Score=68.34 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=42.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
.|+++||+||||++..-. -++.-++....+-+-...|+.|.+ .|..++|+|+.+...++..++.
T Consensus 7 i~~~v~d~dGv~tdg~~~----~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~ 70 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV----INDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEE 70 (169)
T ss_pred CeEEEEeCceeeECCeEE----EcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHH
Confidence 689999999999986100 000001233455566677778876 5888888888887777666554
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0006 Score=74.44 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=54.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----eE
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 645 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~l 645 (918)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998721 1223 5899999999997 6999999998888888888887754 25
Q ss_pred EeeCceEEE
Q 002468 646 AAENGMFLR 654 (918)
Q Consensus 646 iaenGa~i~ 654 (918)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666666544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0011 Score=64.20 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=47.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC--------hhhHHHHhcccCc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 643 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~l~l 643 (918)
|+|+||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999963110 00 01235678999999999986 589999999998 6677777776554
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0079 Score=63.30 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.|+..+++++++++ .+++.+++||| +.+|.+|.+.++.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 48999999999987 57889999999 9999999999965
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.1 Score=57.81 Aligned_cols=169 Identities=14% Similarity=0.199 Sum_probs=112.1
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhC-cCcc--CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN-SDWR--GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 419 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~-P~~~--~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 419 (918)
...++++--.+.+-..+--+|.|+..+-+.. -+-+ -+++. +|+ |.||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llc-iIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLC-IIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEE-EEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4567888889999999999999998653211 1111 12223 333 3467666666666554 45
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEE--CCCCccCChh--HHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCC
Q 002468 420 VPIHHLDRSLDFPALCALYAVTDVALV--TSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW 493 (918)
Q Consensus 420 ~pV~~~~g~v~~~el~aly~~ADv~vv--~Sl~EG~nLv--~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~ 493 (918)
..|.+.+-.+.-++++.++..||..|. ||. -|+-|+ +....-| +.|+++-.|.-..|.+ |+||++++
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLVFE-- 390 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceEec--
Confidence 677777888999999999999996654 553 455444 4566667 3567777787776666 88999996
Q ss_pred CHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 494 NITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 494 D~~~lA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
|.+++|+.|..+++. +..+-. +.++.+.+..-.+|.+....
T Consensus 391 Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 391 DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 899999999999983 223332 22333333345678776544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0042 Score=60.21 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=43.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHHhcc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 640 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 640 (918)
|+|++|+||||++.....- ....+- ....+-+.+.+.|+.|.+ .|..++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998721100 000000 000357899999999986 68999999999 67666565543
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0022 Score=69.81 Aligned_cols=53 Identities=8% Similarity=0.088 Sum_probs=40.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
|+|+||+||||..... + ...+.|.+.++|++|.+ .|..|+++|||+....+..
T Consensus 2 k~i~~D~DGtl~~~~~-~----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~ 54 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-K----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDL 54 (257)
T ss_pred CEEEEeCCCeEEeCCC-c----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHH
Confidence 6899999999997621 0 11267799999999997 6999999999877654333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.003 Score=68.46 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=44.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
++|+||+||||... . .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 2 ~~v~~DlDGtL~~~--------------~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD--------------N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC--------------C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999976 2 467899999999997 69999999999987776666655
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.013 Score=61.57 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
-|...+.+++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 139 p~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 139 PDPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CCcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 46788999999988 56799999999 9999999888753
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0042 Score=69.54 Aligned_cols=55 Identities=11% Similarity=0.196 Sum_probs=43.2
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.++|+||+||||... . .+-+...++|++|.+ .|..++++|+|+.......+..+
T Consensus 27 ~~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKG--------------D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeC--------------C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 4689999999999975 1 245788999999997 69999999999965555555443
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.013 Score=63.05 Aligned_cols=83 Identities=8% Similarity=0.009 Sum_probs=53.8
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCC--CCC---CCcccc---------------cccccCChhHHHHHHHhhcC
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDT--PGR---RGDQIR---------------EMELKLHPDLKQPLNALCHD 618 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~--p~~---~~~~~~---------------~~~~~~~~~~~~~L~~L~~d 618 (918)
.+++|.+.....+.-.|+||+||||++..+. -+. ...++. .....+-+...+.|..|.+
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~- 128 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR- 128 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH-
Confidence 5777888777666669999999999987541 000 000000 0112334448999999987
Q ss_pred CCCcEEEEcCC----ChhhHHHHhcccC
Q 002468 619 PKTTIVVLSGS----DRNVLDKNFQEYN 642 (918)
Q Consensus 619 ~g~~V~IvSGR----~~~~L~~~~~~l~ 642 (918)
.|.+++|||+| ....++.+++.++
T Consensus 129 ~G~~i~iVTnr~~~k~~~~a~~ll~~lG 156 (237)
T TIGR01672 129 RGDAIFFVTGRTPGKTDTVSKTLAKNFH 156 (237)
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHhC
Confidence 69999999999 4445555555443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0049 Score=67.88 Aligned_cols=50 Identities=12% Similarity=0.189 Sum_probs=38.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
.++|+||+||||... . .+-+.+.++|++|.+ .|..++++|||+......+
T Consensus 2 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG--------------E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC--------------C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 478999999999875 1 234569999999997 6899999999875444443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.047 Score=59.95 Aligned_cols=40 Identities=13% Similarity=-0.071 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+-.+...++.+++.++ ++++.+++||| ..+|+.|-+.++
T Consensus 155 ~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aG 194 (272)
T PRK13223 155 QKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAG 194 (272)
T ss_pred CCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCC
Confidence 34456778999999988 56899999999 999999988774
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.69 Score=53.12 Aligned_cols=234 Identities=20% Similarity=0.232 Sum_probs=124.5
Q ss_pred CCCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
++.|+|..=||.-+ .+.+.+|++++..||.++. +|.+|.==++|-..++.....=+..|- +-..|..
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~ifP---FE~~~y~--- 149 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIFP---FEPEFYK--- 149 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECCc---ccHHHHh---
Confidence 35788888888754 5788899999888888754 344544334554444443222122221 1112221
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCeEEE--EEecccccCCH-HHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVML--GVDRLDMIKGI-PQKL 363 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl--~VdRLd~~KGi-~~~L 363 (918)
-.|++ +.|=|+ | =+|.-... .. . ...++.+ .++++|. -=.|-...+-+ +..+
T Consensus 150 -~~g~~-----~~~VGH-------P-l~d~~~~~-----~~-~---~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 150 -KHGVP-----VTYVGH-------P-LLDEVKPE-----PD-R---AEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred -ccCCC-----eEEECC-------c-chhhhccC-----CC-H---HHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 00110 112221 1 12221111 01 0 1122222 3444432 35676665554 8889
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
+|++.+.+++|+++ +++...+. . ..+.++++....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999864 55333221 1 122233333322211 123222 2456778999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeC-----------------CCCchhhc-cCCe---EEECCCCHHHHHHHH
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQSL-GAGA---ILVNPWNITEVANAI 502 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-----------------~aG~~~~l-g~~a---llVnP~D~~~lA~ai 502 (918)
.+++| |.+.+|++..+ .|.|+.= +.|..-.+ |... ++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 89999999985 5655543 33333333 1111 222345889999999
Q ss_pred HHHhcCCH
Q 002468 503 ARALNMSP 510 (918)
Q Consensus 503 ~~aL~m~~ 510 (918)
..+|.++.
T Consensus 335 ~~ll~~~~ 342 (373)
T PF02684_consen 335 LELLENPE 342 (373)
T ss_pred HHHhcCHH
Confidence 99998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.043 Score=59.33 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCC------CCeEEEEEcCC-CCC---hhhhh--cCCCh
Q 002468 192 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLPSR 259 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~------~~~I~~flH~P-fPs---~e~fr--~lP~~ 259 (918)
-.-|.-.++.-++.+..+-...||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|+.
T Consensus 113 ~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~ 192 (245)
T PF08323_consen 113 AERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDE 192 (245)
T ss_dssp HHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGG
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHH
Confidence 33443334444343333212579999999999999999998753 69999999974 221 12221 22321
Q ss_pred --------------HHHHHHHHhCCEEeEeCHHHHHHHHH
Q 002468 260 --------------SDLLRAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 260 --------------~~ll~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
..+-.|+..||.|..-++.|++..++
T Consensus 193 ~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 193 YFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24556799999999999999876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.014 Score=59.21 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=37.7
Q ss_pred CCeEEEEecCcccCCCCC-CCCCCCcccccccc-cCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 571 NNRLLILGFNATLTEPVD-TPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
+.|+++||+||||+.... .+ . .+.+ .+- .+-|.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~--~-~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV--F-PTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc--c-cCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 458899999999997421 00 0 0000 111 245889999999986 6999999996554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.043 Score=54.96 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=58.6
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCce
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 644 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~ 644 (918)
+..++...|-|++|+|-||++. .....+|++++-+.++.. .|..|+|+|--+..-+..+...+++.
T Consensus 21 ~~L~~~Gikgvi~DlDNTLv~w-------------d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 21 DILKAHGIKGVILDLDNTLVPW-------------DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred HHHHHcCCcEEEEeccCceecc-------------cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 3455678899999999999998 245678999999999997 69999999999999999888888776
Q ss_pred EEe
Q 002468 645 LAA 647 (918)
Q Consensus 645 lia 647 (918)
+|.
T Consensus 87 fi~ 89 (175)
T COG2179 87 FIY 89 (175)
T ss_pred eee
Confidence 654
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.026 Score=55.85 Aligned_cols=69 Identities=19% Similarity=0.361 Sum_probs=44.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.||+++|.||||++-.-.-..-+..++ ..+-.---.|+.|.+ .|.+|+|+|||.-.-++...+.+++
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~K----aFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIK----AFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceee----eeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 46799999999999984210000011222 112222234556665 5999999999999999998887654
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.049 Score=55.44 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=46.9
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHHhcccCc
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 643 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~~l~l 643 (918)
.-..+++++|+||||+... ...+.+.+.+.|+.|.+ .+..++|+|+.+ ...+..++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3567999999999999762 33577899999999986 589999999998 4555555554443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.023 Score=56.25 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=38.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
++++||+||||++..... ..... ....+-|.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~~--~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRSL--DDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCCH--HHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999873200 00001 234578899999999997 699999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.017 Score=58.97 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=38.9
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
|++|||.||||+...+.. +. ..+..+.|.+.++|++|.+ .|..++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~~--~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----HE--IDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----CC--HHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999532211 00 0345677899999999997 6899999997754
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=94.91 E-value=3.2 Score=46.78 Aligned_cols=168 Identities=18% Similarity=0.197 Sum_probs=104.5
Q ss_pred EEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEc
Q 002468 308 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 308 ~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.+-.+|.-+|+..-..... ....++..|+-=-.-|++-++...|+++.+.... ++.++.
T Consensus 161 ~~lyfPt~m~~~~~~~~~~------------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~~------~~kIiv--- 219 (360)
T PF07429_consen 161 SLLYFPTRMDPALTLSEKN------------KKNKGKLTILVGNSGDPSNNHIEALEALKQQFGD------DVKIIV--- 219 (360)
T ss_pred eEEEcCCCCchhhhccccc------------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhcCC------CeEEEE---
Confidence 4667788777653221100 0112344455445668888888888877654321 233331
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-ccCChhHHHHHHhcCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDL 466 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~lEamA~~~~ 466 (918)
|- +.+..++++.++|.+.+.++ ||.. .+..++..++.+|+.++++.||++++...| .|||..++ .+.+
T Consensus 220 PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~--- 288 (360)
T PF07429_consen 220 PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL--- 288 (360)
T ss_pred EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---
Confidence 11 12222455677777766654 4432 244568899999999999999999999985 89998765 3444
Q ss_pred CCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHhcC
Q 002468 467 KKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 508 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~lg~~allV----nP~D~~~lA~ai~~aL~m 508 (918)
|.++++|+-.-....+-+.++.| +.-|...+++|=+++...
T Consensus 289 -G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 289 -GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred -CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 47999999888888773334333 455666666665555543
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.067 Score=57.52 Aligned_cols=70 Identities=10% Similarity=0.004 Sum_probs=46.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcc---------c------------ccccccCChhHHHHHHHhhc
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ---------I------------REMELKLHPDLKQPLNALCH 617 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~---------~------------~~~~~~~~~~~~~~L~~L~~ 617 (918)
.++++.+.....+...|.||+|||+++..+..-. +.+ + ......+-+.+++.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~ 128 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK 128 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH
Confidence 5666776665444558999999999974321100 000 0 01234466679999999986
Q ss_pred CCCCcEEEEcCCC
Q 002468 618 DPKTTIVVLSGSD 630 (918)
Q Consensus 618 d~g~~V~IvSGR~ 630 (918)
.|..++++|||+
T Consensus 129 -~G~~I~iVTnR~ 140 (237)
T PRK11009 129 -RGDSIYFITGRT 140 (237)
T ss_pred -CCCeEEEEeCCC
Confidence 699999999996
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.077 Score=52.39 Aligned_cols=92 Identities=16% Similarity=0.249 Sum_probs=47.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChH-----HHHHH-HHhCCEEeEeCHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS-----DLLRA-VLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~-----~ll~~-ll~aDlIgf~t~~~~~~Fl~ 285 (918)
+.|+||+|.++...+..+... +.++.+++|.+++.........+.. .+... .-.+|.|..-+....+.+.
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 579999999888765544333 8899999999874211111111111 11112 2357888877765555443
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhh
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 322 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~ 322 (918)
+ +|. ...++.++|+|||++.|+
T Consensus 156 ---~-~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 156 ---K-FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---H-HT-------------SS-EEE----B-CCCH-
T ss_pred ---H-hCC-----------cccCCEEEECCccHHHcC
Confidence 2 332 246899999999999884
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.19 Score=53.32 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
-..+..+++.++ .+++.++++|| ..+|..|=+.++
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 356667888887 34579999999 999999998886
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.0018 Score=79.25 Aligned_cols=220 Identities=15% Similarity=0.102 Sum_probs=129.7
Q ss_pred CCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh--
Q 002468 556 PSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV-- 633 (918)
Q Consensus 556 ~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~-- 633 (918)
..++..++......-+.-|.++|+||||-.+..+| ..+.++..++.+-.+..+ ...-.++|||.+..
T Consensus 173 spfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v 241 (732)
T KOG1050|consen 173 SPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSV 241 (732)
T ss_pred CCCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeee
Confidence 34566777777777777789999999999998887 355566666666666554 33455699998665
Q ss_pred --------HHHHhcccCceEEeeCceEEEec--CCeeeeeccccC-----ChHHHHHHHHHHHHHHhc------------
Q 002468 634 --------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTMPEHL-----NMEWVDSLKHVFEYFTER------------ 686 (918)
Q Consensus 634 --------L~~~~~~l~l~liaenGa~i~~~--~~~w~~~~~~~~-----~~~w~~~v~~il~~~~~~------------ 686 (918)
..++.+..+++.+++||..++.. ++...-.. +.+ ...+.....+.++.|-+-
T Consensus 242 ~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~ 320 (732)
T KOG1050|consen 242 KALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENP 320 (732)
T ss_pred eecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecC
Confidence 66777777889999999999842 22111001 111 112334444444444321
Q ss_pred --CCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhC
Q 002468 687 --TPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIV 762 (918)
Q Consensus 687 --~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~ 762 (918)
++|.-+++-..++..||+..+..++...+. .+ ..+... ...+...+..+.|+++ ..+.||.++..+...++
T Consensus 321 ~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~----pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~ 395 (732)
T KOG1050|consen 321 KRTDGKEVEELKFCVSVHVRRINEKFGSASYQ----PV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILC 395 (732)
T ss_pred CcccchHHHHHHHHhHhhhhhhhhccCCcccc----eE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHh
Confidence 112112222334444555443333321100 00 000010 1223445667899998 68999999998877766
Q ss_pred cCCCCCCCCceEEEEecCCCCcHHHHHHcCcC
Q 002468 763 HSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPE 794 (918)
Q Consensus 763 ~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~ 794 (918)
... ...+.=...++|| +.+|++.+..++.+
T Consensus 396 ~~~-~~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 396 QEN-KKSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred hcc-cCCceEEeeeccc-cccccccCEEECCc
Confidence 322 0012223489999 99999999999887
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.58 E-value=2.1 Score=48.84 Aligned_cols=250 Identities=15% Similarity=0.121 Sum_probs=126.6
Q ss_pred CCCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
++.|++..=|+.=+ .+...+|+.+|+.||.++. ++.+|.==|.|...+.. .+|++.---+-. ..|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~D~lLailPFE-~~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YVDHLLAILPFE-PAFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--HhhHeeeecCCC-HHHHH---
Confidence 46788887776643 6788999999999999865 23333322333222221 234433211111 11111
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh----cCCeEEEEEe-c-ccccCCHHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVD-R-LDMIKGIPQK 362 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vIl~Vd-R-Ld~~KGi~~~ 362 (918)
+ .|.+ .+|=|+ .=.|.-.+.+. .+..|+++ ..+.+.+--| | =+-..-++-.
T Consensus 153 k-~g~~-----~~yVGH--------pl~d~i~~~~~---------r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 K-FGLP-----CTYVGH--------PLADEIPLLPD---------REAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred h-cCCC-----eEEeCC--------hhhhhcccccc---------HHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 0 1111 112121 11222112111 12245555 2333333332 3 3334456777
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|++.+.+++|+++ ++.-.. -+.|+.+..+.. ..- .. .+.. .+...+....+.+||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~~~---~~~----~~---~~~~----~~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEEAL---KWE----VA---GLSL----ILIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHHHh---hcc----cc---CceE----EecCchHHHHHHHhh
Confidence 889999998999975 332221 133333332221 110 00 0111 123456677899999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh-cc---------------CCeEEECC------CCHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LG---------------AGAILVNP------WNITEVAN 500 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~-lg---------------~~allVnP------~D~~~lA~ 500 (918)
+.+..| |.+.+|++.|+ .|.|++=-...-.. +. -+-.+| | .-++.+|.
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~iv-PEliq~~~~pe~la~ 336 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIV-PELIQEDCTPENLAR 336 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccc-hHHHhhhcCHHHHHH
Confidence 999999 89999999995 67777644333222 10 111111 2 24788999
Q ss_pred HHHHHhcCCH--HHHHHHHHHHHHHHHhc
Q 002468 501 AIARALNMSP--EEREKRHWHNFTHVTTH 527 (918)
Q Consensus 501 ai~~aL~m~~--~er~~r~~~~~~~v~~~ 527 (918)
++..++.++. ++.++....++..+.+.
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 9999998762 12223334455555444
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.14 Score=54.15 Aligned_cols=38 Identities=3% Similarity=-0.258 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
-+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 45568999999998 57899999999 9999999988854
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=94.28 E-value=1.6 Score=51.47 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=91.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
+..++.+..++ .|=-+..+..+.++|+.-|+-+ |++...|. .+. +.++ +.+.+ .|.. -..|
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~--~~l~----~~~~~----~Gv~-~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE--ARLR----RRFAA----HGVD-PDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH--HHHH----HHHHH----TTS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH--HHHH----HHHHH----cCCC-hhhE
Confidence 45455556665 4667899999999999999853 55555442 121 2233 33332 2332 2346
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCC-chh-----hc---cCCeEEECCC
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ-----SL---GAGAILVNPW 493 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG-~~~-----~l---g~~allVnP~ 493 (918)
.| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+ |++|+|--+- .+. .| |-.-++ ..
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELI--AD 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhc--CC
Confidence 64 567788999999999999999987766 5678999999 6777763321 111 11 322222 24
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHh
Q 002468 494 NITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDT 543 (918)
Q Consensus 494 D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~ 543 (918)
|.++..+.-.++-+++ +.++...+++++...+ ++...|+++|...+...
T Consensus 416 s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 SEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 5666665555555543 4555555555555532 57778888777666543
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.063 Score=54.26 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=38.3
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
+++|||.||||......+ ...+.+ ....+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 689999999999853211 111111 234677899999999997 68999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.04 E-value=11 Score=42.95 Aligned_cols=243 Identities=16% Similarity=0.141 Sum_probs=120.6
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHH--hCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
.+|+|.||.=-.-.++..+-....++||++ +|---=+.|.. .|.-++..|.+. -||+----|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 458999987555555555555566888775 33221111221 133455555442 467766677777776654
Q ss_pred HhccccCCCceeeCCeeeEEEEe-eCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEE-EEeccccc---CCHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVML-GVDRLDMI---KGIPQKLL 364 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl-~VdRLd~~---KGi~~~L~ 364 (918)
.|.+ ..+|.++ ..++|.-........+... ...+-.. ..++++| ..=|.... ......+.
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQD-APKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 2321 1233332 3456654222211111110 1122112 3444444 44343332 34567777
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
+++.+.+. ++ +.+|....++ | .....+.+...+++ .++ +..+++..++..|++.|+++
T Consensus 205 ~l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~-~~~~l~~~~~l~ll~~a~~v 262 (346)
T PF02350_consen 205 ALKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVR-LIEPLGYEEYLSLLKNADLV 262 (346)
T ss_dssp HHHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEE-EE----HHHHHHHHHHESEE
T ss_pred HHHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEE-EECCCCHHHHHHHHhcceEE
Confidence 77777766 44 3344333211 1 22333333333221 254 45789999999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcC
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 508 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m 508 (918)
|-.|- | +..||.+++ .|+|.=...|-.++. -...++|. .|.+++.++|.+++..
T Consensus 263 vgdSs--G---I~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 263 VGDSS--G---IQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EESSH--H---HHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EEcCc--c---HHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 88872 2 234999984 677777777777765 12445565 8999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.051 Score=50.53 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=38.4
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh---hhHHHHhcccCce
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNLW 644 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~~~~l~l~ 644 (918)
|+||+||||... ..+-|...++|++|.+ .|..++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999974 2456788999999997 5889999886654 4455555544443
|
... |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.052 Score=54.77 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=33.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..|+|+|--
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeCc
Confidence 6899999999996521 000000011123356789999999987 69999999843
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.14 Score=51.99 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=48.7
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCC-cEEEEcCCC-------hhhHHHHh
Q 002468 567 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 638 (918)
Q Consensus 567 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 638 (918)
.++...|.|+||.|.||++. ....++++..+.++++.+.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 56788999999999999987 3567899999999999974332 599999873 44555544
Q ss_pred cccCce
Q 002468 639 QEYNLW 644 (918)
Q Consensus 639 ~~l~l~ 644 (918)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444543
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.092 Score=53.77 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=39.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
.|+++||.||||.-... + ..... ....+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~-~--~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G--YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCc-c--ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 58999999999865531 1 11222 234577899999999997 589999999876
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.12 Score=57.34 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=49.2
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.+++++|+||||......- ..+-....+..+.+.+.+.|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 45789999999999864210 0000000234678999999999987 59999999999998887766654
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=93.58 E-value=6.1 Score=45.32 Aligned_cols=73 Identities=19% Similarity=0.093 Sum_probs=51.9
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 499 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA 499 (918)
|. +.+.++..++.+|++.||++|-.|. |. ..||.+.+ .|+|. ...=.+.+ |.+.++| +.|.+++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg----~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFG----VPTIN--IGTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcC----CCEEe--ecCCchhhhhcCeEEEe-CCCHHHHH
Confidence 44 6789999999999999999995552 12 28999984 45542 22222223 5566768 77899999
Q ss_pred HHHHHHhc
Q 002468 500 NAIARALN 507 (918)
Q Consensus 500 ~ai~~aL~ 507 (918)
+++.+++.
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.11 Score=59.02 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
+++++|||.||||....... ...+.. ....+-|.+.+.|..|.+ .|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863211 011111 346788999999999976 68999999984
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.22 Score=52.21 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=49.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCC----CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 632 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~----~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 632 (918)
..+.+++.+++...|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .+..|+|||=.+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 35567788889999999999999999821 1110 00000123478999999999886 69999999966543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.22 Score=50.81 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=30.6
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 606 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 606 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+++.+.|+.+.+ .+..|+|+||-+...++..+..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 667799999876 5999999999999888888776544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.12 Score=55.62 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=42.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--HHhcccC
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 642 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~~~~l~ 642 (918)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 3578999999999875 2457899999999997 59999998876654433 5555543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.2 Score=48.55 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=44.2
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH----H-HHHHhCCEEeEeCHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL----L-RAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l----l-~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ . ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 37999999997543221 1222222 2 3345789999999877776653
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCC
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 315 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~G 315 (918)
.|. ...+|.++|+|
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 34578899987
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=92.94 E-value=5.7 Score=49.74 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=101.0
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHH--HhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
+..+++.+-|+..-|-... +|..++++. ..+|+.. ..+++|..|-+..++... +.+-+.|..++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhcC
Confidence 4557788999999998777 777766663 4566521 246777666655555433 4566677777877775322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 491 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVn 491 (918)
...|+|+. ..+-.--..++.+|||-.-+|+ .|.=|..-+=||.- |+|.+|..-|+-.++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 34587765 4455555678899999999998 47777777777663 899999998877655 46788885
Q ss_pred CCCHHHHHH
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
. ..+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 3 5666554
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.11 Score=52.96 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=39.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
+..|+|++|-||||.....-. . .....+-|.+.+.|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~----~---~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH----Y---PGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC----C---HHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 357899999999997652100 0 0234567899999999987 589999999864
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.63 Score=56.48 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=52.5
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCC-CcEEEEcCCChhhHHHHhcccCc
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+.+.....+.+++..||+++.... ....+-|.+.++|+.|.+ .| ..++|+||.+....+...+.+++
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 445556678899999998876421 234578999999999986 57 89999999999998888877654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.14 Score=54.95 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.7
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHHhcc
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 640 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 640 (918)
++||+||||.+.. .+-+.+.++|+.|.+ .+..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999861 234588999999986 588899987 9999998877766
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=92.65 E-value=3.9 Score=47.46 Aligned_cols=141 Identities=16% Similarity=0.208 Sum_probs=80.2
Q ss_pred EEEEEec-ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc------cCCCC
Q 002468 346 VMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR------FGTLT 418 (918)
Q Consensus 346 vIl~VdR-Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~------~g~~~ 418 (918)
+++.-.| =+-.++++.+++|++.+.++ |+ +.++....++ ..+..+++.+.+. .++.. .....
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3445566 44556788999999988655 44 4455444332 2233333333211 11000 00000
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCc------hhh---ccCCeEE
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGAIL 489 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~------~~~---lg~~all 489 (918)
...+.++ ....+...+|+.||++|..| |-+..|+++++ .|.|+--+.+. .+. +-..++.
T Consensus 278 ~~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 278 KGTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred cCceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 0012221 12367889999999999986 46669999995 67777653222 111 1024555
Q ss_pred ECCCCHHHHHHHHHHHhcCC
Q 002468 490 VNPWNITEVANAIARALNMS 509 (918)
Q Consensus 490 VnP~D~~~lA~ai~~aL~m~ 509 (918)
+...+++.++++|.++|+++
T Consensus 346 l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred cCCCCHHHHHHHHHHHHcCH
Confidence 55678899999999999854
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=92.35 E-value=22 Score=40.73 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=49.4
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCc----hhhcc--CCeEEECCC--CHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSLG--AGAILVNPW--NIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~----~~~lg--~~allVnP~--D~~ 496 (918)
+.++++.. .+|..||++| .+-|+ -+..|+++++ .|+|+--..+- +..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 45677755 4578899999 45565 5679999995 67777655542 22221 235555554 789
Q ss_pred HHHHHHHHHhc
Q 002468 497 EVANAIARALN 507 (918)
Q Consensus 497 ~lA~ai~~aL~ 507 (918)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999998
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.21 Score=59.63 Aligned_cols=67 Identities=9% Similarity=0.203 Sum_probs=46.2
Q ss_pred cCCeEEEEecCcccCCCCC---CCCCCCcccccccc-cCChhHHHHHHHhhcCCCCcEEEEcCCCh------------hh
Q 002468 570 SNNRLLILGFNATLTEPVD---TPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NV 633 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~---~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~------------~~ 633 (918)
...|++|||+||||..... .|. -+ .+- .+.|.+.+.|++|.+ .|..++|+|..+- ..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~-----~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~k 238 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPK-----GP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAK 238 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCC-----CH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHH
Confidence 4569999999999996421 110 00 122 257899999999987 6999999998655 23
Q ss_pred HHHHhcccCc
Q 002468 634 LDKNFQEYNL 643 (918)
Q Consensus 634 L~~~~~~l~l 643 (918)
+...+..+++
T Consensus 239 i~~iL~~lgi 248 (526)
T TIGR01663 239 IEAIVAKLGV 248 (526)
T ss_pred HHHHHHHcCC
Confidence 5566666554
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.1 Score=52.68 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=35.8
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 744 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 744 ~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
.+.+.+|+.+++.+++..+ ++++.++++|| +.+|.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4667899999999999876 56789999999 99999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.25 Score=51.27 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=25.2
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+-|.+.+.|..|.+ . ..++|+||.....++..+..+
T Consensus 69 ~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 69 PLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 45667777777775 3 677778888777777666654
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.34 Score=48.04 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=49.1
Q ss_pred CCeEEEEecCcccCCCCC--CCCCC-Cc-ccc--------cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHh
Q 002468 571 NNRLLILGFNATLTEPVD--TPGRR-GD-QIR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 638 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~--~p~~~-~~-~~~--------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 638 (918)
++.++++|+||||+.... .++.. .. .+. .....+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998642 11111 10 000 1233567899999999974 6899999999999998887
Q ss_pred cccC
Q 002468 639 QEYN 642 (918)
Q Consensus 639 ~~l~ 642 (918)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7653
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.33 Score=53.38 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 198 ~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 198 RRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred HHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 357788888887 56789999999 998877766663
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.35 Score=51.68 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=47.1
Q ss_pred CCeEEEEecCcccCCCCCCCCC--CC----c--c----cccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh---HH
Q 002468 571 NNRLLILGFNATLTEPVDTPGR--RG----D--Q----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 635 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~--~~----~--~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 635 (918)
.+-+++||+|-|+++..+.-.. .+ + . +....+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999986311000 00 0 0 112355678899999999987 699999999999765 44
Q ss_pred HHhcc
Q 002468 636 KNFQE 640 (918)
Q Consensus 636 ~~~~~ 640 (918)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55544
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.33 Score=49.73 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=48.7
Q ss_pred CeEEEEecCcccCCCCCCC-----CCCCcccc-------cccccCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHHh
Q 002468 572 NRLLILGFNATLTEPVDTP-----GRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 638 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p-----~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~ 638 (918)
.||+.||+|+||.+..-.. -+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4799999999999763211 00011111 1234577899999999987 68999999988 787777776
Q ss_pred cccC
Q 002468 639 QEYN 642 (918)
Q Consensus 639 ~~l~ 642 (918)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.45 Score=48.92 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|+.+++++++.++ .+++.++++|| +.+|.+|++.++.
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 49999999999887 56889999999 9999999999864
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.31 Score=53.34 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=47.7
Q ss_pred cCCeEEEEecCcccCCCCCCC-----CCCC---ccc----ccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--
Q 002468 570 SNNRLLILGFNATLTEPVDTP-----GRRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 635 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p-----~~~~---~~~----~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 635 (918)
.++..|+||+|+|+++..+.- ...+ ... ......+-|.+.+.|+.|.+ .|..|+|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 456799999999999764210 0000 000 11234567899999999987 59999999999855444
Q ss_pred -HHhcccCc
Q 002468 636 -KNFQEYNL 643 (918)
Q Consensus 636 -~~~~~l~l 643 (918)
.++..+++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.33 Score=51.32 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=26.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
.+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 74 ~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 456677777777665 57777777777777776666653
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.18 E-value=24 Score=40.41 Aligned_cols=85 Identities=20% Similarity=0.184 Sum_probs=56.4
Q ss_pred HHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCch--hh------c--cCCeEEECCCC--HHHHH
Q 002468 432 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 499 (918)
Q Consensus 432 ~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~--~~------l--g~~allVnP~D--~~~lA 499 (918)
+++.++|+.||+++.=+= ++++.|..|++ .|.|+=-+...+ ++ | -..|+.+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999987552 58899999995 666666555542 22 2 12456665554 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 500 NAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 500 ~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+.|.+++..+ +..+++..+.+....
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~~~ 340 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKLGK 340 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhcCC
Confidence 9999999863 333333344443333
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=90.35 E-value=1.3 Score=53.61 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=48.6
Q ss_pred HhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCC-cEEEEcCCChhhHHHHhcccCc
Q 002468 568 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 568 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.....+.+++-.||++..... ....+-+.+.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 338 ~~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 338 ESAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hhCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 334456777788888775421 133577899999999987 688 9999999999999888877654
|
. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.41 Score=48.26 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=34.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.+.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 356889999999886 5899999999999999988887654
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.034 Score=59.56 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=52.9
Q ss_pred cCCeEEEEecCcccCCCCCC------------CCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 570 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
-++..++||+|+|+++..+. |.....-+.......-|.+++.++.+.+ .|..|+++|||+...-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 35678999999999864211 0000000001223445668899999887 6999999999998765555
Q ss_pred hccc-CceEEeeCceEEEe
Q 002468 638 FQEY-NLWLAAENGMFLRC 655 (918)
Q Consensus 638 ~~~l-~l~liaenGa~i~~ 655 (918)
...+ ..|+-.-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 5554 33444446666664
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.39 Score=52.33 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=44.8
Q ss_pred CCeEEEEecCcccCCCCCCCCC--CC------cccc-----cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 571 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
.+-+++||+|+|+++..+.-.. .+ .... ...+..-|.+++..+.|.+ .|.+|+++|||+-..-..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999964311100 00 0011 1245567899999999986 6999999999986554333
Q ss_pred hcc
Q 002468 638 FQE 640 (918)
Q Consensus 638 ~~~ 640 (918)
...
T Consensus 179 ~~N 181 (275)
T TIGR01680 179 EAN 181 (275)
T ss_pred HHH
Confidence 333
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.21 Score=49.58 Aligned_cols=38 Identities=21% Similarity=0.103 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|-.+.+.|+++++ +.++++.|+|| |.+|.++|+.+.-
T Consensus 83 dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGl 120 (170)
T COG1778 83 DKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGL 120 (170)
T ss_pred hHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCC
Confidence 89999999999998 67899999999 9999999999964
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=89.34 E-value=0.58 Score=49.15 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhCcCCCCCCC-CceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~-~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+...+.+++++++ .+ ++.+++||| ..+|..+=+.++-
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~aa~~aG~ 184 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEAGINAGA 184 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHHHHHCCC
Confidence 4566777888877 33 688999999 9999877777643
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=89.20 E-value=14 Score=42.35 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=61.3
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh----c--cCCeEEECC--CCHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----L--GAGAILVNP--WNIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~----l--g~~allVnP--~D~~ 496 (918)
+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--.. + -..|+.++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 45777764 5678999988654 665 679999995 67777544432211 2 123555654 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 002468 497 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 536 (918)
Q Consensus 497 ~lA~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 536 (918)
+++++|.++|..+ +.+++.+.+.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555444433 3444554433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=89.10 E-value=44 Score=40.80 Aligned_cols=66 Identities=21% Similarity=0.217 Sum_probs=44.4
Q ss_pred HHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe-------------------CCCCchhhc-cCCe--EEE--
Q 002468 435 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGA--ILV-- 490 (918)
Q Consensus 435 ~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS-------------------e~aG~~~~l-g~~a--llV-- 490 (918)
..++++||+++++| |.+.+|++.++ .|.|+. .+.|..-.+ |+.. =++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68899999999999 89999999995 566653 233333333 2221 123
Q ss_pred -CCCCHHHHHHHHHHHhcCCH
Q 002468 491 -NPWNITEVANAIARALNMSP 510 (918)
Q Consensus 491 -nP~D~~~lA~ai~~aL~m~~ 510 (918)
.-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 345688999886 7776553
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.93 Score=49.50 Aligned_cols=34 Identities=3% Similarity=-0.150 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 752 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 752 ~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
..+..+++.++ .+++.+++||| ..+|..+=+.++
T Consensus 169 e~~~~a~~~l~------~~p~~~l~IgD-s~~Di~aA~~aG 202 (260)
T PLN03243 169 EMFMYAAERLG------FIPERCIVFGN-SNSSVEAAHDGC 202 (260)
T ss_pred HHHHHHHHHhC------CChHHeEEEcC-CHHHHHHHHHcC
Confidence 34456667777 56788999999 888866655553
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=88.84 E-value=20 Score=40.93 Aligned_cols=195 Identities=13% Similarity=0.164 Sum_probs=101.8
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHh
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 638 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 638 (918)
|..++..--...+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|.|||.=.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 444444444444679999999999999832 12234455555555554 49999999988877655444
Q ss_pred ccc-C------------------c-eEEeeCceEEEec-----------CCeeeeeccccCChHHH-HHHHHHHH-----
Q 002468 639 QEY-N------------------L-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFE----- 681 (918)
Q Consensus 639 ~~l-~------------------l-~liaenGa~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~il~----- 681 (918)
..+ + + .+-||.-+.++.. ..+|... .-..|. +.+..+++
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 332 1 1 2445555555532 1235321 112353 23444443
Q ss_pred --HHHhc--CCCceeeeccceEEEEeeccChhhhHHHHH----HHHHHHhcCC-C-CCCCeEEEEcCc--EEEEEeCCCC
Q 002468 682 --YFTER--TPRSHFEQRETSLVWNYKYADVEFGRIQAR----DMLQHLWTGP-I-SNASVEVVQGSK--SVEVRAVGVT 749 (918)
Q Consensus 682 --~~~~~--~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~----el~~~L~~~~-~-~~~~l~v~~G~~--~vEI~p~gvn 749 (918)
....+ .| ..|-.|+-++-+--. ........+.+ .+...| +.. . ..-++....|.. +|+| -|
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----Gd 349 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----GD 349 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----CC
Confidence 22222 34 345555544433211 11111112222 233344 221 1 123555566543 4555 38
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
|..++..+.+.+...+ .+.+.+++-+||
T Consensus 350 Ks~GV~~lQ~y~~~~~--~i~~~~tLHVGD 377 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEG--GIKPSETLHVGD 377 (408)
T ss_pred cHHhHHHHHHHHHhcc--CCCccceeeehh
Confidence 9999999888881111 167899999999
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.40 E-value=0.64 Score=46.71 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=42.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccc-ccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhH---HHHhcc
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQE 640 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L---~~~~~~ 640 (918)
++++|+|||++...- .++-++- ......+.+.++.+++++ .|..++-+|+|+.... +.|+..
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHH
Confidence 478999999997620 1111100 112567889999999996 6999999999997554 345544
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=88.06 E-value=0.61 Score=49.63 Aligned_cols=30 Identities=10% Similarity=-0.054 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHH
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 787 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedM 787 (918)
-....++++.++ .+++.+++||| ..+|..+
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~a 181 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDA 181 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH
Confidence 456777788887 57889999999 8777443
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=87.74 E-value=2.9 Score=53.36 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 562 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 562 ~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
...+.+.+...+.+++-+||+++.... ....+-|...+.|++|.+ .|.+++++||.+....+...+.+
T Consensus 620 ~~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 620 AEITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 334555666678888889998764311 112355778899999986 68999999999998888777765
Q ss_pred C
Q 002468 642 N 642 (918)
Q Consensus 642 ~ 642 (918)
+
T Consensus 688 g 688 (834)
T PRK10671 688 G 688 (834)
T ss_pred C
Confidence 4
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=86.99 E-value=1.3 Score=46.73 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.6
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3567888888888876 58899999999888888877764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.95 E-value=1.3 Score=44.94 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+.|..|+..++++++.. ++.++++|| +.||..|-+.+.
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d 182 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSD 182 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCC
Confidence 56788998888886641 467999999 999999887764
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.73 E-value=1.5 Score=49.32 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=47.9
Q ss_pred CCeEEEEecCcccCCCC--CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 571 NNRLLILGFNATLTEPV--DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~--~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
..|+|++|+|+||..-+ ++ +..+ + ....+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 36899999999999753 11 0000 0 011245889999999986 6999999999999999988887
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=86.49 E-value=4.8 Score=44.31 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=60.4
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
.+++++..|-.|+.+.....++|+..+. +++ .+..|.+++. +.++ ++++++.. + + .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNLD----ELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCHH----HHHHHHHh-C---C-----CE
Confidence 3578999999999887777788876542 232 2333343321 2233 34444332 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 474 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS 474 (918)
. +.++ .+++..+|..||+++.. -|.++.|+++++ .|.|+-
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i 266 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAI 266 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEE
Confidence 3 2333 36899999999999984 458999999995 555543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=85.48 E-value=0.78 Score=45.77 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcc-----cccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
|+++||+||||+.....+....+. .......+-|.+.+.|+.|++ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999875433110000 001223456889999999875 6899999999998888888776
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.38 E-value=1.5 Score=44.73 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=40.5
Q ss_pred CeEEEEecCcccCCCCCCCCCC-------Cc-c---cccccccCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHHhc
Q 002468 572 NRLLILGFNATLTEPVDTPGRR-------GD-Q---IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQ 639 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~-------~~-~---~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~ 639 (918)
.+||+||+|+||-+..-+--.. .. . .......+-|.+.++|++|.. .|..++++|=-+ .+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 4799999999999853211000 00 0 112345678899999999997 699999999543 456667777
Q ss_pred ccCce
Q 002468 640 EYNLW 644 (918)
Q Consensus 640 ~l~l~ 644 (918)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 76554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=85.22 E-value=1.5 Score=49.30 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=35.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCC----CCcEEEEc---CCChhhHHHHh
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF 638 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~----g~~V~IvS---GR~~~~L~~~~ 638 (918)
.|+||+||||... ..+-+...++|+.|.. . +..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~g---------------~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------KKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC---------------ccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5899999999975 2347889999999986 4 66666554 66677654444
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=85.11 E-value=1.7 Score=43.70 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=52.0
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccc---------------------ccccccCChhHHHHHHHhhcCCCCcEEEEc
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 627 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 627 (918)
+.++..++||+|.||+.....|....... ......+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35678899999999998765542111000 00123456899999999985 68999999
Q ss_pred CCChhhHHHHhcccC
Q 002468 628 GSDRNVLDKNFQEYN 642 (918)
Q Consensus 628 GR~~~~L~~~~~~l~ 642 (918)
.-+....+..++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999988888763
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.02 E-value=1.6 Score=46.42 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=30.8
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+-|.+.+.|..|.+ .+..++++|+.+...++..+..++
T Consensus 86 ~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 86 KPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 566788888888887 468899999998888877776543
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.46 E-value=24 Score=39.47 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=83.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE-EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq-ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 421 (918)
++..|+-=-.=|++-++...|+++.+++.. ++.++. .+.|+ ++ +++.++|.+.+.++ ||.. .
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---N 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---c
Confidence 344454445668899999999998777543 243432 23333 22 34566777666554 5532 3
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeE
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 488 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~al 488 (918)
+..++..++.+|+.++++.+|+.++.--| .|+|..++=.- . +.|+++++-.-.-..+-+.++
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~-~----G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ-L----GKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH-C----CCcEEEecCCchHHHHHhCCC
Confidence 55678999999999999999999998874 99998876433 3 478999887777766633443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=84.25 E-value=0.93 Score=46.59 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=28.3
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+-|.+.+.|+.|.+ .|..++|+||.....++.+++.+++
T Consensus 81 ~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 81 LRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCC
Confidence 34567778888775 5788888888887777777776543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=84.07 E-value=1.4 Score=50.63 Aligned_cols=17 Identities=12% Similarity=0.089 Sum_probs=15.0
Q ss_pred cCCeEEEEecCcccCCC
Q 002468 570 SNNRLLILGFNATLTEP 586 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~ 586 (918)
+.-+.++||+||||++.
T Consensus 129 ~~~~~VIFDlDGTLIDS 145 (381)
T PLN02575 129 CGWLGAIFEWEGVIIED 145 (381)
T ss_pred CCCCEEEEcCcCcceeC
Confidence 46789999999999985
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.99 E-value=1 Score=46.33 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccc-ccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
.++||||-||||.-..++ ++.. ++-...+.++++|.+|.+ .+..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 689999999999865321 1111 345678899999999996 79999999864
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=83.97 E-value=17 Score=39.49 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.0
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHH
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 786 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDed 786 (918)
+...|.+||.++..++..++ ..++.||+|-| ......
T Consensus 156 lft~~~~KG~~L~~fL~~~~------~~pk~IIfIDD-~~~nl~ 192 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKIN------QSPKKIIFIDD-NKENLK 192 (252)
T ss_pred EEeCCCccHHHHHHHHHHcC------CCCCeEEEEeC-CHHHHH
Confidence 44678999999999999998 45789999999 654443
|
The function is not known. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=83.35 E-value=1.6 Score=45.89 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=30.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.|.+.+.|..|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888862 48888888888888887777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.35 E-value=1.3 Score=48.55 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=40.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC---ChhhHHHHhcc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---DRNVLDKNFQE 640 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR---~~~~L~~~~~~ 640 (918)
+.+.++||+||||..- ..+=|...+.|++|.+ .|..++++|-. +...+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 3467999999999964 2455789999999997 58888888754 44545555544
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=83.21 E-value=2.2 Score=50.69 Aligned_cols=46 Identities=17% Similarity=0.186 Sum_probs=37.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEeeCc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 650 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liaenG 650 (918)
+.+++.+.|+++.+ .|..++|+|+.+...++.....+++ .++|.++
T Consensus 73 ~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 56899999999986 6999999999999999988887753 3555444
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.65 E-value=47 Score=37.93 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=26.7
Q ss_pred HHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe
Q 002468 434 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 474 (918)
Q Consensus 434 l~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS 474 (918)
...+|+.||+++..| |.+.+|+++++ .|.|+.
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g----~P~Vv~ 260 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIG----TPFVLA 260 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhC----CCEEEE
Confidence 357899999999999 88999999995 566664
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=82.65 E-value=1.3 Score=45.84 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=36.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..|-.|..+++.++++.+ ++++.++++|| +.+|.+|++.++.
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 356679999999999877 56789999999 9999999999975
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=82.16 E-value=15 Score=47.38 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=51.1
Q ss_pred HHHHHHHhcCCeEEEEecCc-----ccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 002468 562 DSIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 636 (918)
Q Consensus 562 ~~~~~y~~s~~rLI~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 636 (918)
...+.|.+...|.+++=|++ |++.... ..-.+-+++.++|++|.+ .|.+|+++||-.......
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ 560 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVS 560 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHH
Confidence 34455666677888888776 4443210 122466899999999986 699999999999999988
Q ss_pred HhcccCc
Q 002468 637 NFQEYNL 643 (918)
Q Consensus 637 ~~~~l~l 643 (918)
....+++
T Consensus 561 ia~~~Gi 567 (884)
T TIGR01522 561 IARRLGM 567 (884)
T ss_pred HHHHcCC
Confidence 8877553
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=81.64 E-value=7.2 Score=44.33 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=78.6
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC---Ccc---CChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSL---RDG---MNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 495 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl---~EG---~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~ 495 (918)
+.|+....+.......|+.-|+++.=+. -++ ++.-..|+++|+ |++|.+-..++-..++.+--+|--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3443333344667777777777765433 233 388899999994 777777777666556443333335799
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 496 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 496 ~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
.++.+.|..++.-+ +||++..+.+++.| ..|+-..=+..++..+..
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999976 58888888887776 456666656566665554
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=81.47 E-value=2.2 Score=49.38 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=30.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 639 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 639 (918)
.+-|.+.+.|+.|.+ .+..++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 356778889999986 599999999999988877665
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=80.79 E-value=3 Score=43.60 Aligned_cols=62 Identities=21% Similarity=0.284 Sum_probs=45.7
Q ss_pred cCCeEEEEecCcccCCCC-CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 570 SNNRLLILGFNATLTEPV-DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~-~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..+++++||+|+||++.. ..+ . .....=|.+.+-|+.+.+ ...|+|=|..+..-++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~--~------~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE--T------GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC--C------ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 467899999999999752 111 0 122345778999999886 7899999998887877766654
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.74 E-value=3.5 Score=43.21 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|..+++.+++.++ .+++.+++||| ..+|.+|.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999988 56899999999 9999999998854
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=80.46 E-value=2.3 Score=43.91 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.7
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 632 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 632 (918)
..|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577899999999996 57788888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.29 E-value=3.3 Score=41.85 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=48.2
Q ss_pred CeEEEEecCcccCCCCCCCCC-CCcc---cc------cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 572 NRLLILGFNATLTEPVDTPGR-RGDQ---IR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~-~~~~---~~------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
++.+++|+|+||+.....|.. ..+. ++ ..-...-|.+.+.|..|.+ ...|+|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 467999999999987655521 1110 00 0112456789999999986 4899999988888888888766
Q ss_pred C
Q 002468 642 N 642 (918)
Q Consensus 642 ~ 642 (918)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 918 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-63 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-63 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 1e-61 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 3e-15 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 3e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 2e-14 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 676 bits (1747), Expect = 0.0
Identities = 154/487 (31%), Positives = 242/487 (49%), Gaps = 25/487 (5%)
Query: 95 RLLVVANRLP------------VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAE 142
RL+VV+NR+ I +K W GW+G ++ K + K
Sbjct: 3 RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKG--N 60
Query: 143 KRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMF 202
L E + +YYN + N +LWP FHY RL + + + Y++ N +
Sbjct: 61 ITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDGYLRVNALL 113
Query: 203 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL 262
AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI LP+ L
Sbjct: 114 ADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTL 173
Query: 263 LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFPIGIDSERF 321
L + DL+GF T + F+ + + G+ R +PIGI+ +
Sbjct: 174 LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEI 233
Query: 322 IRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVV 381
+ P+ + +L+ + + V+RLD KG+P++ LA+E LE+ GK+
Sbjct: 234 AKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIR 292
Query: 382 LLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 441
QIA +R DV YQ + Q+ GRING++G L P+++L++ D L ++ +
Sbjct: 293 YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 352
Query: 442 DVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAN 500
DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP++ EVA
Sbjct: 353 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNPYDRDEVAA 411
Query: 501 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLRE 560
A+ RAL MS ER RH + + W E F+S+L V + ++ +
Sbjct: 412 ALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQRDKVATFP 471
Query: 561 ADSIERY 567
++E +
Sbjct: 472 KLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 631 bits (1629), Expect = 0.0
Identities = 105/500 (21%), Positives = 181/500 (36%), Gaps = 47/500 (9%)
Query: 92 SRQRLLVVANRLPVSAIRRG---------------------VKEFEARWIGWAGVNV--- 127
+ + + + R ++ WI A
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRR 60
Query: 128 PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 184
+ +T L R I V L D + N N++W +Y + + +
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSF 119
Query: 185 TRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 242
+ +A + + + FAD + K V HDY L+ +P L+E D + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 243 LHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVSACTRILG---FEGTP 297
+H P+PS++ R LP R+ +L +L A +GF + R+F+ + +L +
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREA 239
Query: 298 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 357
VE +G TR+ P+G + ++E G ++++ R D IK
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLPEGIEEWADGHRLVVHSGRTDPIK 294
Query: 358 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 417
+ + AF L K +L P R VP +V V N G+
Sbjct: 295 NAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS- 351
Query: 418 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 477
+D D A + D+ + S DG NL ++E + + +ILSE
Sbjct: 352 ---DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-RDADVILSETC 407
Query: 478 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 537
GAA+ LG VNP+++ E A AI+ AL P +R + T + W + +
Sbjct: 408 GAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQL 467
Query: 538 SELNDTVVEAQLRIKQVPPS 557
L ++ +
Sbjct: 468 DGLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 9e-26
Identities = 27/216 (12%), Positives = 66/216 (30%), Gaps = 30/216 (13%)
Query: 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 633
L+ L ++ TL + P ++ L ++ L + +++G
Sbjct: 3 LIFLDYDGTLVPIIMNP----EESY-----ADAGLLSLISDL--KERFDTYIVTGRSPEE 51
Query: 634 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE 693
+ + F ++ + +G + + + D + + P
Sbjct: 52 ISR-FLPLDINMICYHGACSKINGQIVYNNGSDRF-LGVFDRIYEDTRSWVSDFPGLRIY 109
Query: 694 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAA 753
++ +++++ + + + VE G +E+R GV KG+A
Sbjct: 110 RKNLAVLYHLGLMGAD----MKPKLRSRI-EEIARIFGVETYYGKMIIELRVPGVNKGSA 164
Query: 754 IDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 789
I + E + G DE +
Sbjct: 165 IRSVRGE-----------RPAIIAGDDAT-DEAAFE 188
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.8 bits (162), Expect = 2e-11
Identities = 74/469 (15%), Positives = 140/469 (29%), Gaps = 152/469 (32%)
Query: 2 PGNSYNSNSSNIP------PDRVTRLVREKIERDLRKSSRASHPN------DVTDNGGRE 49
S + +SSNI + RL++ K + N +V +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN 260
Query: 50 VFEDEQRL----RDG---DNLGPSI---VDEDLEGPASTPNEGCE----RLDGRTFSRQR 95
F ++ R D L + + D TP+E LD R R
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 96 LLVVANRLPVSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIV 155
++ N +S I +++ A W W VN LT + + + V L+
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNC------DKLTTII--ESSLNV-LEPAEY 371
Query: 156 HQYYNG--------------YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQM 201
+ ++ ++W + + D ++ Y
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSD----VMVVVNKLHKY------ 414
Query: 202 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSD 261
+V K K+ + +L K EY +HR++ +
Sbjct: 415 --SLVEKQPKES-TISIPSIYLELKVKLENEY-----------------ALHRSIVDHYN 454
Query: 262 LLRAVLAADLVGFHTYDY-----ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP-IG 315
+ + + DL+ + Y H + + R+ F +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNI---------------EHPE--RMTLFRMVF 497
Query: 316 IDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIK---------GIPQKLL- 364
+D RF+ K ++ A ++ L + ++L+
Sbjct: 498 LDF-RFLEQ----------KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546
Query: 365 AFEKFL---EENSDWRGKVV-LLQIAVPTRTDVPEYQRLTSQVHEIVGR 409
A FL EEN K LL+IA+ + E + + + H+ V R
Sbjct: 547 AILDFLPKIEENL-ICSKYTDLLRIAL-----MAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 94/598 (15%), Positives = 166/598 (27%), Gaps = 231/598 (38%)
Query: 6 YNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDGDNLGP 65
YN N V+RL + + LR++ LR N+
Sbjct: 120 YNDNQV-FAKYNVSRL--QPYLK-LRQAL--------------------LELRPAKNVL- 154
Query: 66 SIVDEDLEGPASTPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGVKEFEARWIGWAGV 125
++G G G+T VA + +S + +F+ W+
Sbjct: 155 ------IDGVL-----GS----GKT-------WVALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 126 NVPDEI-------------------------------GQKALTKALAEK---RCIPVFLD 151
N P+ + Q L + L K C+ V L
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-LL 251
Query: 152 EDIVHQYYNGYCNNILWPLFHYLGLPQED---R-LATTRSFQSQFAAYIKANQMFADVVN 207
++ N W F + + L TTR Q ++ A +
Sbjct: 252 -NV--------QNAKAWNAF--------NLSCKILLTTR--FKQVTDFLSAATTT-HISL 291
Query: 208 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL 267
H+ D L K L D+ P E+ T P +++
Sbjct: 292 DHHSMT---LTPDEVKSLLLKYLDCRPQDL--------P---REVLTTNP----RRLSII 333
Query: 268 AADL-VGFHTYDYARHF--------VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDS 318
A + G T+D +H + + +L P E +
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVL----EPA--EYR--------------- 372
Query: 319 ERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA-FEKF--LEENSD 375
+ F L + P HI + L + D+IK ++ K+ +E+
Sbjct: 373 KMF-DRLSVFPPSAHIPT--------IL-LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 376 WRGKVVLLQIAVPTRTDVPEYQRLTSQVH-EIVGRINGR----FGTLTAVPI-------- 422
+ + I + + + L H IV N L +
Sbjct: 423 -ESTISIPSIYLELKVKLENEYAL----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 423 -HHLDRS-------------LDF-----------PALCALYAVTDVALVTSLRDGMNLVS 457
HHL LDF A A ++ + L+ L
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT-----LQQ---LKF 529
Query: 458 YE-FVACQDLKKGVLI--LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEE 512
Y+ ++ D K L+ + +F L+ ++ + + AL M+ +E
Sbjct: 530 YKPYICDNDPKYERLVNAILDF-----LPKIEENLIC----SKYTDLLRIAL-MAEDE 577
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 4e-08
Identities = 82/622 (13%), Positives = 176/622 (28%), Gaps = 157/622 (25%)
Query: 199 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMK-VGWFLHTPFPSSEIHRTLP 257
+ M + Y+ D++ +F + + D K V + EI +
Sbjct: 5 HHMDFETGEHQYQYKDIL------SVFEDAFVDNF--DCKDVQDMPKSILSKEEIDHIIM 56
Query: 258 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-LGFEGTPEGVEDQGRLTRVAAF---- 312
S+ + + + + + FV RI F +P E + +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 313 -PIGIDSERFI-----RALEINPVQVHIKELQETFAGRKVML-GVDRLDMIKGIPQKLLA 365
+ D++ F R ++ + EL+ + V++ G + G + +A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP---AKNVLIDG-----V-LGSGKTWVA 167
Query: 366 FE-----KFLEENSD---W-------RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 410
+ K + W + VL + P + + I RI
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 411 N---GRFGTLTAVPIHH-----LD--------RSLDFPALCALYAVTDVALVT----SLR 450
+ L + L + + C + L+T +
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKI-------LLTTRFKQVT 278
Query: 451 DGMNLVSYEFVACQDLKKGVL------ILSEFAG-AAQSLGAGAILVNPWNITEVANAIA 503
D ++ + ++ + +L ++ Q L + NP
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----------- 327
Query: 504 RALNMSPEE-REKR-HWHNFTHVTTHTAQEWAETFVSELNDTVVEA---QLRI----KQV 554
R L++ E R+ W N+ HV E+ ++ L +L + +
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 555 PPSL----------READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL 604
P L + + L L+ T + P +ELK+
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLH--KYSLVEKQPKEST--ISIPS------IYLELKV 437
Query: 605 HPDLKQPLNA---------LCHDPKTTIVV-------------LSGSDR----NVLDKNF 638
+ + L+ D I L + + F
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 639 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 698
++ +L + +R + W + LN + LK Y + P +E+ +
Sbjct: 498 LDFR-FLEQK----IRHDSTAWNASGSI-LNT--LQQLKFYKPYICDNDP--KYERLVNA 547
Query: 699 LVWNYKYADVEFGRIQARDMLQ 720
++ + + D+L+
Sbjct: 548 ILDFLPKIEENLICSKYTDLLR 569
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 186 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 245
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 246 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 305
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 306 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 362
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 423 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 7e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 193 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 241
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 242 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 299
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 300 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 343
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 344 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 401
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 402 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 460
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 461 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 517
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 518 W 518
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 8e-06
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 276 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 335
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 336 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 394
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 395 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 454
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 455 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 512
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 513 REKRHWHNFTHVTTHTAQEWAETF 536
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 308 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 367
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 425
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 484
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 485 AG--AILVNPWNITEVANAIARALNMSPEEREK 515
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)
Query: 239 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 294
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 295 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 354
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 355 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 412
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 413 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 470
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 471 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 527
++ + G A + G ++ P++ ++ + +AL R + + T
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQ 355
Query: 528 TAQEWAE 534
E
Sbjct: 356 DLYSLPE 362
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 175 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 223
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 224 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 283
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 284 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 343
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 344 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 396
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 397 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 453
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 454 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 510
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 511 EERE-------KRHWHNFT 522
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 918 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-127 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-08 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 8e-06 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 7e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 391 bits (1004), Expect = e-127
Identities = 152/464 (32%), Positives = 232/464 (50%), Gaps = 25/464 (5%)
Query: 95 RLLVVANRLP------------VSAIRRGVKEFEARWIGWAGVNVPDEIGQKALTKALAE 142
RL+VV+NR+ I +K W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNED--QPLKKVKKGN 59
Query: 143 KRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMF 202
L E + +YYN + N +LWP FHY RL + + + Y++ N +
Sbjct: 60 ITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDGYLRVNALL 112
Query: 203 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL 262
AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI LP+ L
Sbjct: 113 ADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTL 172
Query: 263 LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFPIGIDSERF 321
L + DL+GF T + F+ + + G+ R +PIGI+ +
Sbjct: 173 LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEI 232
Query: 322 IRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVV 381
+ P+ + +L+ + + V+RLD KG+P++ LA+E LE+ GK+
Sbjct: 233 AKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIR 291
Query: 382 LLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 441
QIA +R DV YQ + Q+ GRING++G L P+++L++ D L ++ +
Sbjct: 292 YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 351
Query: 442 DVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAN 500
DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP++ EVA
Sbjct: 352 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNPYDRDEVAA 410
Query: 501 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 544
A+ RAL MS ER RH + + W E F+S+L V
Sbjct: 411 ALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 56.4 bits (134), Expect = 1e-08
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 146 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 205
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 206 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 265
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 266 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 325
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 326 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 383
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 384 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 503
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 504 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 47.0 bits (110), Expect = 8e-06
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 249
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 250 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 296
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 297 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 345
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 346 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 401
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 402 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 461
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 462 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 515
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 39.4 bits (90), Expect = 7e-04
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 315 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 371
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 431
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 432 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 491
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 492 PWNITEVANAIARALNMSPEEREK 515
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 918 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.94 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.94 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.93 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.92 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.91 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.9 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.86 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.86 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.85 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.82 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.81 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.9 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.31 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.24 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.12 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.0 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.9 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.87 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.54 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.33 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.32 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.25 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.92 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.85 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 96.72 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.59 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.27 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.06 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 96.05 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 95.86 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 95.09 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 95.09 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.04 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 94.91 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 94.11 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.89 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.7 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.45 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 92.66 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 92.31 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 91.49 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 91.31 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 90.82 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 90.04 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 88.37 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.36 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 86.99 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 86.92 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 86.15 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 85.33 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 85.06 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 81.33 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=770.02 Aligned_cols=439 Identities=34% Similarity=0.614 Sum_probs=403.3
Q ss_pred CCEEEEECCCCCCCCCCC------------CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Q ss_conf 719999866764320046------------43479089984899999902268999852395099985384768776787
Q 002468 94 QRLLVVANRLPVSAIRRG------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNG 161 (918)
Q Consensus 94 ~~livvsnrlP~~~~~~~------------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~~~~~~~~y~~ 161 (918)
+||||||||+|+...+.. +++.+++||||+|...++++. .......+++|.||+|+++++++||+|
T Consensus 1 srlivvsnr~~~~~~~~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~~~~~~Y~g 78 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQDLDEYYNQ 78 (456)
T ss_dssp CCEEEEEEECCCCC----CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHHHHHHHTTT
T ss_pred CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCH--HHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 978999799997888778996189972999951797899669988766423--455540585169956999999999987
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE
Q ss_conf 77876674301899984210111311289-99999999999999998635999889993775212799999618998199
Q 002468 162 YCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVG 240 (918)
Q Consensus 162 f~~~~LWp~~H~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fA~~i~~~~~~~DiVwihDyhl~llp~~lr~~~~~~~I~ 240 (918)
|||++|||+|||+.... .|++ .|++|++||+.||+++.+.++++|+||||||||+++|.+||+..|+++|+
T Consensus 79 f~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~ 150 (456)
T d1uqta_ 79 FSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIG 150 (456)
T ss_dssp HHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEE
T ss_pred HHHCCCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCEE
T ss_conf 15442621015766654--------4037888889999999999998725689869995452555699999858998589
Q ss_pred EEECCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCC-CCCCEEECCEEEEEEEEECCCCHH
Q ss_conf 9982799974555029980799999883878867189999999999998836546-899333179155899950776924
Q 002468 241 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEG-TPEGVEDQGRLTRVAAFPIGIDSE 319 (918)
Q Consensus 241 ~flH~PfPs~e~fr~lP~r~~ll~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~-~~~~i~~~g~~~~v~v~P~GID~~ 319 (918)
||+|+|||++++|+++|++++|+++|+++|+||||+++|++||+.+|.++++... ....+.+.|+.+++.++|+|||++
T Consensus 151 ~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~ 230 (456)
T d1uqta_ 151 FFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPK 230 (456)
T ss_dssp EECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHH
T ss_pred EEECCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCCCH
T ss_conf 99689999857755485069999776322620035899999999999997386112687299568155301206765626
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 33033049814999999999836980899970544458978999999997886847558578999974999992779999
Q 002468 320 RFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 399 (918)
Q Consensus 320 ~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l 399 (918)
.|......+ ..+.+.+++..++++++|++|||+|+.||+..+|+||++|++++|+++++++|+|++.|++++.++|.++
T Consensus 231 ~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~ 309 (456)
T d1uqta_ 231 EIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 309 (456)
T ss_dssp HHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHH
T ss_pred HHHHHCCCH-HHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 654311407-7999999777528985999937874320658999999999875843146189999748753456889999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC-CCCCEEEEECCCC
Q ss_conf 999999998640346987844399957989988999999875689978997668826999987048-9984399929878
Q 002468 400 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFAG 478 (918)
Q Consensus 400 ~~~i~~lv~~IN~~~g~~~~~pV~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~-~~~g~lIlSe~aG 478 (918)
+.++.+++++||++|++.+|.|++++.+.+++.++.++|+.|||+++||++||||||++|||||+. .++|+||+|+++|
T Consensus 310 ~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G 389 (456)
T d1uqta_ 310 RHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 389 (456)
T ss_dssp HHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 99999999998765212798750211587678887677753054525876578883999999908988897589728978
Q ss_pred CHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 012104873999999999999999999539999999999989789986289999999999999848
Q 002468 479 AAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 544 (918)
Q Consensus 479 ~~e~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 544 (918)
+++++ .+|++|||+|++++|++|.++|+||++||++|+++++++|.+||++.|+++||.+|+++.
T Consensus 390 ~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 390 AANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp GGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred CHHHH-CCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 77885-976998959999999999999749999999999999899997899999999999987551
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=7.1e-36 Score=238.31 Aligned_cols=224 Identities=16% Similarity=0.204 Sum_probs=181.4
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCEE
Q ss_conf 29999268655899889998876201012467965999999941099980999858996659997200295399127469
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMF 652 (918)
Q Consensus 573 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ 652 (918)
-|||||+||||++...+| +...++++++++|++|++ ++.|+|+|||+...+...+.. ..+++++||+.
T Consensus 1 ~Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~ 68 (229)
T d1u02a_ 1 SLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGAC 68 (229)
T ss_dssp CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTE
T ss_pred CEEEEEECCCCCCCCCCH---------HHCCCCHHHHHHHHHHHH--CCCEEEECCCCHHHHHHHCCC-CCCEEECCEEE
T ss_conf 989999557778997896---------548899999999999850--997899969987996643476-66289647089
Q ss_pred EEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 99539814330565579578999999999988049981552102127998413574665899999999973199899976
Q 002468 653 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 732 (918)
Q Consensus 653 i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~si~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v 732 (918)
+..++..+.... ......|.+.+...+..+....++...+.+...+.+++..............+...+ ....+
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~ 142 (229)
T d1u02a_ 69 SKINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGV 142 (229)
T ss_dssp EEETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTC
T ss_pred EECCCCEEEECC-HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH-----HCCCE
T ss_conf 834993466233-054499999999986776506677210355421342203332445799999999985-----23876
Q ss_pred EEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99984909999969999999999999981858878999732999925999739999874858999999998888888767
Q 002468 733 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIK 812 (918)
Q Consensus 733 ~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~~~~~~~~~~~~~~~~~~~~ 812 (918)
.+..|..++||.|+|+|||.|++.|+++ ++++|||| +.||++||+++.
T Consensus 143 ~~~~~~~~idi~p~g~~Kg~al~~l~~~-----------~~~i~~GD-s~ND~~Mf~~~~-------------------- 190 (229)
T d1u02a_ 143 ETYYGKMIIELRVPGVNKGSAIRSVRGE-----------RPAIIAGD-DATDEAAFEAND-------------------- 190 (229)
T ss_dssp EEEECSSEEEEECTTCCHHHHHHHHHTT-----------SCEEEEES-SHHHHHHHHTTT--------------------
T ss_pred EEEEECEEEEEECCCCCHHHHHHHHHCC-----------CCCEEECC-CCCHHHHHHCCC--------------------
T ss_conf 9996021899736989889999997440-----------44566438-887099996028--------------------
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECC
Q ss_conf 85201112332025886555587778888888888998888877899886642212478986089997899984314418
Q 002468 813 VPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQ 892 (918)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~~~l~ 892 (918)
++|+|+||.++|+|+|++.
T Consensus 191 -------------------------------------------------------------~~~av~~g~~~~~A~~~~~ 209 (229)
T d1u02a_ 191 -------------------------------------------------------------DALTIKVGEGETHAKFHVA 209 (229)
T ss_dssp -------------------------------------------------------------TSEEEEESSSCCCCSEEES
T ss_pred -------------------------------------------------------------CEEEEEECCCCCCCEEECC
T ss_conf -------------------------------------------------------------8289996898766728759
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 988999999997730
Q 002468 893 SSDEVVSFLKKLADA 907 (918)
Q Consensus 893 ~~~~V~~~L~~L~~~ 907 (918)
+++||..||+.|...
T Consensus 210 ~~~ev~~~l~~l~~~ 224 (229)
T d1u02a_ 210 DYIEMRKILKFIEML 224 (229)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 999999999999999
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.5e-31 Score=211.36 Aligned_cols=321 Identities=17% Similarity=0.215 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHH-HCCCCEEEEEECCCCC----CHHHHHCCC--C
Q ss_conf 289999999999999999986359--998899937752127999996-1899819999827999----745550299--8
Q 002468 188 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP----SSEIHRTLP--S 258 (918)
Q Consensus 188 ~~~~w~~Y~~vN~~fA~~i~~~~~--~~DiVwihDyhl~llp~~lr~-~~~~~~I~~flH~PfP----s~e~fr~lP--~ 258 (918)
|.+.|..|...++.+++.+..... ..|+||+||+|..+.+.+++. ..+.+++++++|.... ....+..+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCH
T ss_conf 65218899999988776653025688888799336067788999998547898889998324423467888998862114
Q ss_pred -------------HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHH
Q ss_conf -------------0799999883878867189999999999998836546899333179155899950776924330330
Q 002468 259 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 325 (918)
Q Consensus 259 -------------r~~ll~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~ 325 (918)
......++..+|.+...+..+++.++.. ..+... ..+ ...+..++.++|+|+|.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH---HCCCCH--HHH-HHHCCCCEEEEECCCCHHHCCCCC
T ss_conf 44065443432056899988776444213119999999987---547536--656-665156479997893401205664
Q ss_pred CC-----------CCHHHHHHHHHHHH----CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
Q ss_conf 49-----------81499999999983----6980899970544458978999999997886847558578999974999
Q 002468 326 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 390 (918)
Q Consensus 326 ~~-----------~~~~~~~~~lr~~~----~~~~iIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr 390 (918)
.. .......+.++..+ .+.++|+++||+++.||+..+++|++++++.++ .|+.+|.
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G~--- 328 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLGA--- 328 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEEC---
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCC------EEEEEEC---
T ss_conf 5333333104567776663899887414466786389998500215883799999998786598------3999936---
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 99277999999999999864034698784439995798998899999987568997899766882699998704899843
Q 002468 391 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 470 (918)
Q Consensus 391 ~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~ 470 (918)
++.. ...++.++..+.+. .+. +.+..+.+++..+|+.||++|+||.+||||+|++|||||+ .|
T Consensus 329 G~~~----~~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G----~P 391 (477)
T d1rzua_ 329 GDVA----LEGALLAAASRHHG--------RVG-VAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CI 391 (477)
T ss_dssp BCHH----HHHHHHHHHHHTTT--------TEE-EEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CE
T ss_pred CCCH----HHHHHHHHHHHCCC--------EEE-EECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC----CC
T ss_conf 7745----77899998763587--------278-9715470579999983851348865357888999999839----98
Q ss_pred EEEECCCCCHHHC--C---------CCEEEECCCCHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 9992987801210--4---------873999999999999999999539--99999999998978998628999999999
Q 002468 471 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 537 (918)
Q Consensus 471 lIlSe~aG~~e~l--g---------~~allVnP~D~~~lA~ai~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl 537 (918)
+|+|+.+|..|.+ | .+|++|+|.|++++|++|.++|+. .++.++++.++.. -+.++|..-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHH
T ss_pred EEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHCCHHHHHHHHH
T ss_conf 9990799974055248755334678744896999999999999999860079999999999999--85189999999999
Q ss_pred HHHHH
Q ss_conf 99998
Q 002468 538 SELND 542 (918)
Q Consensus 538 ~~l~~ 542 (918)
...++
T Consensus 470 ~lY~~ 474 (477)
T d1rzua_ 470 ALYSQ 474 (477)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=6.3e-30 Score=201.30 Aligned_cols=307 Identities=19% Similarity=0.201 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCH---HHHH------CCCC--HHHHHHHHH
Q ss_conf 9999999986359998899937752127999996189981999982799974---5550------2998--079999988
Q 002468 199 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR------TLPS--RSDLLRAVL 267 (918)
Q Consensus 199 N~~fA~~i~~~~~~~DiVwihDyhl~llp~~lr~~~~~~~I~~flH~PfPs~---e~fr------~lP~--r~~ll~~ll 267 (918)
....+..+......+|+|++|+++..+++.++++. .+.++.+..|..++.. ..+. ...+ .........
T Consensus 107 ~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (437)
T d2bisa1 107 SVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGY 185 (437)
T ss_dssp HHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99989999840899978998970466676543013-46762589962144555123321012013456778899988887
Q ss_pred HCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH--CCCE
Q ss_conf 38788671899999999999988365468993331791558999507769243303304981499999999983--6980
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 345 (918)
Q Consensus 268 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 345 (918)
.+|.+...+........ ..+.. ...++.++|+|+|++.|.+....+........++..+ .+++
T Consensus 186 ~~d~v~~~~~~~~~~~~----~~~~~-----------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T d2bisa1 186 IADIVTTVSRGYLIDEW----GFFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV 250 (437)
T ss_dssp HSSEEEESCHHHHHHTH----HHHGG-----------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCE
T ss_pred HHHHHCCCCHHHHHHHH----HHHCC-----------CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 65221111024566666----65134-----------5675189704654434332222010588887654554026786
Q ss_pred EEEEEECCCC-CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 8999705444-589789999999978868475585789999749999927799999999999986403469878443999
Q 002468 346 VMLGVDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 424 (918)
Q Consensus 346 iIl~VdRLd~-~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~~ 424 (918)
+|+++||++. .||+..+++|++.+..+... .++.|+++|.. .+.+. ..++.+.... + .+.+
T Consensus 251 ~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~----~~~~~---~~~~~~~~~~----~-----~~~~ 312 (437)
T d2bisa1 251 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG----DPELE---GWARSLEEKH----G-----NVKV 312 (437)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB----CHHHH---HHHHHHHHTC----T-----TEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCCCCCCCC--CCCEEEEECCC----CCCCC---CCHHHHCCCC----C-----CCEE
T ss_conf 6987303566512589998641023323333--32114531022----33332---1002210232----1-----0000
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHC-CCCEEEECCCCHHHHHHHHH
Q ss_conf 57989988999999875689978997668826999987048998439992987801210-48739999999999999999
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIA 503 (918)
Q Consensus 425 l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~l-g~~allVnP~D~~~lA~ai~ 503 (918)
+.+.++.+++..+|+.||++++||..||++++.+|||||+ .|+|+|+.+|..+.+ +.+|++|+|.|++++|++|.
T Consensus 313 ~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~ 388 (437)
T d2bisa1 313 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAIL 388 (437)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC----CCEEEECCCCCHHHEECCCEEEECCCCHHHHHHHHH
T ss_conf 2345768889998764223544465556426899999879----989993899807737789589977999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 9953999999999998978998628999999999999984
Q 002468 504 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 504 ~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 543 (918)
++|.+.++.++++.+..++.++.++|..++++++.-.+++
T Consensus 389 ~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 9983799999999999999999699999999999999999
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=6.9e-25 Score=169.94 Aligned_cols=192 Identities=20% Similarity=0.227 Sum_probs=151.4
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHH--CCCEEEEEEECCC-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 769243303304981499999999983--6980899970544-4589789999999978868475585789999749999
Q 002468 315 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 391 (918)
Q Consensus 315 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VdRLd-~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~ 391 (918)
|||.+.|.+........+....+++++ +++++|++|||++ +.||+..+++|++.+.++.+.. ++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB---
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC--CEEEEEEEEC---
T ss_conf 91813308988870168999999999597999889997688811049999999988641125788--8189999613---
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 92779999999999998640346987844399957989988999999875689978997668826999987048998439
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 471 (918)
Q Consensus 392 ~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~l 471 (918)
.+.++.+. +.+...+ ..++++.+.++.+++..+|+.||++++||..||++++.+|||+|+ .|+
T Consensus 76 -~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEGWA---RSLEEKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHHHH---HHHHHHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -CCCHHHHH---HHHHHCC---------CEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC----CEE
T ss_conf -55213454---3322113---------115775302332110000123233443222112332201333148----604
Q ss_pred EEECCCCCHHHC-CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 992987801210-487399999999999999999953999999999998978998628
Q 002468 472 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 528 (918)
Q Consensus 472 IlSe~aG~~e~l-g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 528 (918)
|+|+.+|..+.+ +..|++++|.|+++++++|.++|.+..+.+.++...+++++.+++
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 6517885320102873146789999999999999995799999999999999998378
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.1e-25 Score=173.21 Aligned_cols=189 Identities=16% Similarity=0.231 Sum_probs=123.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC--CCEEEEEC
Q ss_conf 9299992686558998899988762010124679659999999410999809998589966599972002--95399127
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 649 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~--~l~liaen 649 (918)
.|||++|+||||++.. ...+++.++++|++|++ .|..++++|||+...+.++++.+ ..+++++|
T Consensus 2 IKli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEECCCCCCCCC-------------CCCCHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 7999994775672799-------------83996999999999997-899899995999899999999828666267412
Q ss_pred CEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC---------CCCEEEECC------------------------
Q ss_conf 46999539814330565579578999999999988049---------981552102------------------------
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRE------------------------ 696 (918)
Q Consensus 650 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~---------~Gs~iE~K~------------------------ 696 (918)
|+.+...++..... ... .+.....+..+.... ++.++....
T Consensus 68 Ga~i~~~~~~~~~~---~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred EEEEEECCCEEEEE---CCC---HHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 16999899089973---266---588899999998624842999815736884688188999987523455202537662
Q ss_pred CEEEEEEE-CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
Q ss_conf 12799841-35746658999999999731998999769998490999996999999999999998185887899973299
Q 002468 697 TSLVWNYK-YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 775 (918)
Q Consensus 697 ~si~~hyr-~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi 775 (918)
....+.+. ..+.+ +..++.+++ ..........+..+..++||.|+++|||.|++.|+++++ ++.+.++
T Consensus 142 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi 210 (269)
T d1rlma_ 142 DDVLFKFSLNLPDE----QIPLVIDKL-HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVV 210 (269)
T ss_dssp CSCEEEEEEECCGG----GHHHHHHHH-HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred CCHHEEEEECCCHH----HHHHHHHHH-HHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHC------CCCCCEE
T ss_conf 21024777508889----999999999-998515338999758268884586577788887766502------1424189
Q ss_pred EEECCCCCCHHHHHHCC
Q ss_conf 99259997399998748
Q 002468 776 CIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 776 ~iGD~d~tDEdMF~~~~ 792 (918)
+||| +.||++||+.+.
T Consensus 211 ~~GD-~~ND~~Ml~~ag 226 (269)
T d1rlma_ 211 AIGD-SGNDAEMLKMAR 226 (269)
T ss_dssp EEEC-SGGGHHHHHHCS
T ss_pred EECC-CCCHHHHHHHCC
T ss_conf 9908-844199998589
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.2e-25 Score=174.59 Aligned_cols=228 Identities=14% Similarity=0.142 Sum_probs=164.8
Q ss_pred HCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH---CCC
Q ss_conf 38788671899999999999988365468993331791558999507769243303304981499999999983---698
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 344 (918)
Q Consensus 268 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 344 (918)
.++.+...+....+.++. ..+. ...++.++|+|||++.+.+... +.. ...++..+ .++
T Consensus 135 ~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~i~vi~~gv~~~~~~~~~~-~~~---~~~~r~~~~~~~~~ 195 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQK----HYQT-----------EPERFQILPPGIYPDRKYSEQI-PNS---REIYRQKNGIKEQQ 195 (370)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCC-----------CGGGEEECCCCCCGGGSGGGSC-TTH---HHHHHHHTTCCTTC
T ss_pred CCCEEEEECHHHHHHHHH----HCCC-----------CCCEEEEEEEECCCCCCCCCCC-HHH---HHHHHHCCCCCCCC
T ss_conf 574699824799999998----6099-----------9642899974022221124676-566---66654304888663
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 08999705444589789999999978868475585789999749999927799999999999986403469878443999
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 424 (918)
Q Consensus 345 ~iIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~~ 424 (918)
++++++||+.+.||+..+++|++.+.+++|+. .++.++... .+ .++++++.+++.. ..+++
T Consensus 196 ~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~----~~~ii~g~~---~~------~~~~~~~~~~~~~------~~v~~ 256 (370)
T d2iw1a1 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQD---KP------RKFEALAEKLGVR------SNVHF 256 (370)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSS---CC------HHHHHHHHHHTCG------GGEEE
T ss_pred EEEEEEECCCCCCCHHHHCCCCCCCCCCCCCC----EEEECCCCC---CC------CCCCCCCCCCCCC------CCCCC
T ss_conf 69999851455420333201112332332210----000011222---22------2322222222222------22222
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHC--CCCEEE-ECCCCHHHHHHH
Q ss_conf 57989988999999875689978997668826999987048998439992987801210--487399-999999999999
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL-VNPWNITEVANA 501 (918)
Q Consensus 425 l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~l--g~~all-VnP~D~~~lA~a 501 (918)
.++. +++..+|+.||++++||..|||+++.+|||+|+ .|+|+|+.+|..+.+ +.+|.+ ++|.|++++|++
T Consensus 257 -~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~ 329 (370)
T d2iw1a1 257 -FSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 329 (370)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHH
T ss_pred -CCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC----EEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHH
T ss_conf -3323--344422233334443222234331133214577----039993899718885279836998699999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 9999539999999999989789986289999999999999
Q 002468 502 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 502 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 541 (918)
|.++|+++ +.++++.++++++++++++..|.+....-++
T Consensus 330 i~~ll~d~-~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 330 LRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHCCH-HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 99997699-9999999999999998285479999999984
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=2e-24 Score=167.05 Aligned_cols=185 Identities=15% Similarity=0.142 Sum_probs=121.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC---CCEEEEE
Q ss_conf 9299992686558998899988762010124679659999999410999809998589966599972002---9539912
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAAE 648 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~---~l~liae 648 (918)
.|||++|+||||++. ...++++++++|++|++ ++.++++|||++..+...+..+ +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred EEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHC--CCEEEEECCCCHHHHHHHHHHHCCCCCCEECC
T ss_conf 499999177565489--------------59449999999999974--99799989998588899999846567731136
Q ss_pred CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCE------------------------------
Q ss_conf 74699953981433056557957899999999998804998155210212------------------------------
Q 002468 649 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS------------------------------ 698 (918)
Q Consensus 649 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~s------------------------------ 698 (918)
||+.+...++....- ...+.+ .+..+++..........+...+..
T Consensus 66 nGa~i~~~~~~~i~~--~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGVILN--EKIPPE---VAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEEEEE--CCBCHH---HHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCEEEEECCCCCCCC--CCCCHH---HHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCCHHHHH
T ss_conf 982899546664324--579989---999999999733842787407668862774888989886078722047688874
Q ss_pred -----EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEE-EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf -----799841357466589999999997319989997699-98490999996999999999999998185887899973
Q 002468 699 -----LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID 772 (918)
Q Consensus 699 -----i~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d 772 (918)
..+.+. .++ .+..++.+.+ ...+.+ .+.+ ..+..++||.|+|+|||.|++.|+++++ ++.+
T Consensus 141 ~~~~~~~i~~~-~~~----~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~ 207 (267)
T d1nf2a_ 141 SKMGTTKLLLI-DTP----ERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKE 207 (267)
T ss_dssp HHHCBSEEEEE-CCH----HHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGG
T ss_pred HHCCCEEEEEE-CCH----HHHHHHHHHH-HHHHCC-CEEEEEEECCEEEECCCCCCHHHHHHHHHHHHC------CCCC
T ss_conf 41162378884-559----9999999999-886078-389999621145655877751678999988603------6822
Q ss_pred EEEEEECCCCCCHHHHHHC
Q ss_conf 2999925999739999874
Q 002468 773 YVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 773 ~vi~iGD~d~tDEdMF~~~ 791 (918)
.+++||| +.||.+||+.+
T Consensus 208 ~vva~GD-~~ND~~ml~~~ 225 (267)
T d1nf2a_ 208 EIVVFGD-NENDLFMFEEA 225 (267)
T ss_dssp GEEEEEC-SHHHHHHHTTC
T ss_pred CEEEECC-CCCHHHHHHHC
T ss_conf 0899808-84409999868
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=2.7e-23 Score=160.06 Aligned_cols=187 Identities=12% Similarity=0.189 Sum_probs=123.1
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC--CEEEEEC
Q ss_conf 92999926865589988999887620101246796599999994109998099985899665999720029--5399127
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~--l~liaen 649 (918)
.|||++|+||||++. ...+++++.++|++|.+ .|+.++++|||++..+.+.+..++ .+++++|
T Consensus 1 iKli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 65 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 65 (285)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred CEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 909999788664188--------------79419999999999997-889999997999899999999809985899547
Q ss_pred CEEEEECCC-EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC-------------------------------
Q ss_conf 469995398-143305655795789999999999880499815521021-------------------------------
Q 002468 650 GMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET------------------------------- 697 (918)
Q Consensus 650 G~~i~~~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~------------------------------- 697 (918)
|+.+...++ .+.. ...+. +.+.++++.+........+.....
T Consensus 66 G~~i~~~~~~~i~~---~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T d1nrwa_ 66 GAVIHDPEGRLYHH---ETIDK---KRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLK 139 (285)
T ss_dssp GTEEECTTCCEEEE---CCCCH---HHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred CEEEEECCCCEEEE---CCCCH---HHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 31699568743564---16888---9999999999976971687417648860663777777777664057421055653
Q ss_pred ---------------------------EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-CCCEEEEEECCCC
Q ss_conf ---------------------------279984135746658999999999731998999769998-4909999969999
Q 002468 698 ---------------------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVT 749 (918)
Q Consensus 698 ---------------------------si~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEI~p~gvn 749 (918)
...+....... ...........+ .....+.++. +..++||.|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~ 213 (285)
T d1nrwa_ 140 QAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF--FKEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKAS 213 (285)
T ss_dssp HHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECS--CHHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCS
T ss_pred HHHHHHHCCCCCEEECHHHHHHHCCCCHHHEEEECCCC--HHHHHHHHHHHH----HCCCCEEEEEECCCEEEEECCCCH
T ss_conf 33333310145201031888763145211201311232--189999999986----327976999947968999555402
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999818588789997329999259997399998748
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
||.|+++++++++ ++.+.+++||| +.||.+||+.+.
T Consensus 214 K~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~Ml~~a~ 249 (285)
T d1nrwa_ 214 KGQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAG 249 (285)
T ss_dssp HHHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSS
T ss_pred HHHHHHHHHHHCC------CCCCCEEEEEC-CHHHHHHHHHCC
T ss_conf 3668988776505------57204999929-788899998489
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.9e-24 Score=167.18 Aligned_cols=193 Identities=12% Similarity=0.181 Sum_probs=124.0
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC-----CEE
Q ss_conf 792999926865589988999887620101246796599999994109998099985899665999720029-----539
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 645 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-----l~l 645 (918)
..|||++|+||||++. ...+++++.++|++|.+. |..|+|+|||++..+.+++..++ .++
T Consensus 3 ~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~ 67 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYC 67 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEE
T ss_pred CEEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 7069999577664389--------------795199999999999978-9999999899989999999984676898589
Q ss_pred EEECCEEEEEC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHC-----CCCCEEEECCC----------------------
Q ss_conf 91274699953-981433056557957899999999998804-----99815521021----------------------
Q 002468 646 AAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRET---------------------- 697 (918)
Q Consensus 646 iaenG~~i~~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~r-----~~Gs~iE~K~~---------------------- 697 (918)
+++||+.+... ++..... ..........+..+.+..... ..+.+...+..
T Consensus 68 i~~nGa~i~~~~~~~~i~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1rkqa_ 68 ITYNGALVQKAADGSTVAQ--TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEK 145 (271)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGG
T ss_pred EECCCEEEECCCCCEEEEE--ECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 9868516750677708985--02007788887888886164078873132774056611677777764057610031655
Q ss_pred -----EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -----279984135746658999999999731998999769-99849099999699999999999999818588789997
Q 002468 698 -----SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 771 (918)
Q Consensus 698 -----si~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~-v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~ 771 (918)
.+.......+++ ...+..+.+ ...+. ..+. +..|...+||.|+++|||.|++.|+++++ .+.
T Consensus 146 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~-~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~~ 213 (271)
T d1rkqa_ 146 MDPNTQFLKVMMIDEPA----ILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKP 213 (271)
T ss_dssp SCTTCCBCEEEEECCHH----HHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCG
T ss_pred CCCCCCEEEEEEECCHH----HHHHHHHHH-HHHHH-CCEEEEEECCCEEEECCCCCCCCCCCCEEHHHCC------CCH
T ss_conf 07655458999946777----899999999-99850-5638999547268852788876542000011001------142
Q ss_pred CEEEEEECCCCCCHHHHHHCCC
Q ss_conf 3299992599973999987485
Q 002468 772 DYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 772 d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
+.++|||| +.||.+||+.+..
T Consensus 214 ~~ii~~GD-~~ND~~ml~~~~~ 234 (271)
T d1rkqa_ 214 EEIMAIGD-QENDIAMIEYAGV 234 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHSSE
T ss_pred HCEEEEEC-CHHHHHHHHHCCC
T ss_conf 01799918-6767999985891
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.92 E-value=7.8e-23 Score=157.17 Aligned_cols=185 Identities=16% Similarity=0.251 Sum_probs=129.4
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC--CCEEEEE
Q ss_conf 79299992686558998899988762010124679659999999410999809998589966599972002--9539912
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAE 648 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~--~l~liae 648 (918)
+.|+|+||+||||++. ...++++++++|++|.+ .|..|+++|||+...+...+... +..++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CCEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 9369999167777379--------------89469999999999986-79959999278688899999864887320012
Q ss_pred CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 74699953981433056557957899999999998804998155210212799841357466589999999997319989
Q 002468 649 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 728 (918)
Q Consensus 649 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~si~~hyr~ad~e~~~~qa~el~~~L~~~~~~ 728 (918)
||+.+......-. . ......+. ....+...+...........+...+.+.-...+.+ ..+++.+++
T Consensus 66 ~g~~~~~~~~~~~--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKRIF--L-ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEEEE--S-CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT------
T ss_pred CCEEEECCCCCCC--C-CCCCHHHH-HHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCHH----HHHHHHHHH------
T ss_conf 2201002421000--2-34418899-99999986266542144144224589934611699----999999983------
Q ss_pred CCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHC
Q ss_conf 997699984909999969999999999999981858878999732999925999739999874
Q 002468 729 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 729 ~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~ 791 (918)
...+....+...+|+.|.+.+|+.+++.++++++ .+++.+++||| +.||++||+.+
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~ml~~a 187 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVV 187 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHS
T ss_pred CCCEEEEECCCEEEEEECCCCCCHHHCCCCCCCC------CCHHHEEEEEC-CCCHHHHHHHC
T ss_conf 6652896089489994077676133201121100------13324256626-73079999978
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.92 E-value=1.9e-23 Score=160.96 Aligned_cols=191 Identities=16% Similarity=0.165 Sum_probs=120.1
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCC--C--CCEEEE
Q ss_conf 929999268655899889998876201012467965999999941099980999858996659997200--2--953991
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--Y--NLWLAA 647 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~--~--~l~lia 647 (918)
.|+||+|+||||++. ....++++++++|++|.+ .|..|+++|||++..+...+.. . ..++|+
T Consensus 1 ~k~if~DlDGTL~~~-------------~~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~ 66 (260)
T d2rbka1 1 TKALFFDIDGTLVSF-------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYIT 66 (260)
T ss_dssp CCEEEECSBTTTBCT-------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEE
T ss_pred CEEEEEECCCCCCCC-------------CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 929999888887189-------------979989999999999997-889999988998899999999971588773476
Q ss_pred ECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEE-EECCCEEE-------------EEEECCC-HHHHH
Q ss_conf 274699953981433056557957899999999998804998155-21021279-------------9841357-46658
Q 002468 648 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLV-------------WNYKYAD-VEFGR 712 (918)
Q Consensus 648 enG~~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i-E~K~~si~-------------~hyr~ad-~e~~~ 712 (918)
+||+++..+++.... ...+.+....+..+++.+ .....+ +....... ++....+ ..+..
T Consensus 67 ~nGa~i~~~~~~i~~---~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (260)
T d2rbka1 67 MNGAYCFVGEEVIYK---SAIPQEEVKAMAAFCEKK---GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEE 140 (260)
T ss_dssp GGGTEEEETTEEEEE---CCCCHHHHHHHHHHHHHH---TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHH
T ss_pred CCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHC---CCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 277401257532104---678889999999999973---98689983575541364078999999863257676567767
Q ss_pred H-----------HHHHHHHHHHCCCCCCCCEEEEE-CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 9-----------99999999731998999769998-49099999699999999999999818588789997329999259
Q 002468 713 I-----------QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF 780 (918)
Q Consensus 713 ~-----------qa~el~~~L~~~~~~~~~v~v~~-g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~ 780 (918)
. ...+....+ ...+ ..+++.. +..++||.|+++|||.|++.|+++++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD- 210 (260)
T d2rbka1 141 ASNKEVIQMTPFITEEEEKEV-LPSI--PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD- 210 (260)
T ss_dssp HHTSCCSEEEECCCHHHHHHH-GGGS--TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC-
T ss_pred HCCCCEEEEEECCCHHHHHHH-HHHH--CCCCCEEECCCEEEEEECCCCHHHHHHHHHHHCC------CCHHHEEEECC-
T ss_conf 367646988512788999999-9872--1554014558679997488999999999987322------35755167658-
Q ss_pred CCCCHHHHHHCC
Q ss_conf 997399998748
Q 002468 781 LGKDEDVYAFFE 792 (918)
Q Consensus 781 d~tDEdMF~~~~ 792 (918)
+.||.+||+.+.
T Consensus 211 ~~ND~~Ml~~a~ 222 (260)
T d2rbka1 211 GGNDISMLRHAA 222 (260)
T ss_dssp SGGGHHHHHHSS
T ss_pred CCCCHHHHHHCC
T ss_conf 855599998489
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.91 E-value=2.1e-23 Score=160.71 Aligned_cols=195 Identities=17% Similarity=0.246 Sum_probs=127.1
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC--
Q ss_conf 999982279299992686558998899988762010124679659999999410999809998589966599972002--
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-- 641 (918)
Q Consensus 564 ~~~y~~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-- 641 (918)
-++++.++.|||++|+||||+.. ....++++++++|.+|.+ .|..|+|+|||++..+...++.+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~-------------~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD-------------KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC-------------TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred CCCCCCCCCCEEEEECCCCCCCC-------------CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCC
T ss_conf 66675359619999888888489-------------899679999999999998-8998999869998999999998476
Q ss_pred ------CCEEEEECCEEEEECCC-EEEEECCCCCCHHHHHHHHHHHHHHHHCCC--CCEEEECCCEE-------------
Q ss_conf ------95399127469995398-143305655795789999999999880499--81552102127-------------
Q 002468 642 ------NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTP--RSHFEQRETSL------------- 699 (918)
Q Consensus 642 ------~l~liaenG~~i~~~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~r~~--Gs~iE~K~~si------------- 699 (918)
....++.||+.+....+ .... ...+... +..+++.+..... ..++.......
T Consensus 68 ~~~~~~~~~~i~~~g~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (283)
T d2b30a1 68 KKMNFYGMPGVYINGTIVYDQIGYTLLD---ETIETDV---YAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQK 141 (283)
T ss_dssp HHHTCCSCSEEEGGGTEEECTTCCEEEE---CCCCHHH---HHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHH
T ss_pred CCCCCCCCCEEEEEEEEEECCCCCEEEE---CCCCHHH---HHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHH
T ss_conf 6545557743787545898489968310---2568788---899998877506651589973230687046327788888
Q ss_pred -----------------------EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf -----------------------998413574665899999999973199899976999849099999699999999999
Q 002468 700 -----------------------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDR 756 (918)
Q Consensus 700 -----------------------~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEI~p~gvnKG~ai~~ 756 (918)
.+.+ .+.+ ....+...+ ...+......+..+...+||.|++++||.+++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~ 214 (283)
T d2b30a1 142 MYSENRSIIIRHNEMLKYRTMNKLMIV--LDPS----ESKTVIGNL-KQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINY 214 (283)
T ss_dssp HHSCCCCEEECHHHHTTCCCCSEEEEC--CCTT----THHHHHHHH-HHHSTTTEEEEECTTSCEEEEETTCCHHHHHHH
T ss_pred HHHCCCCCCCCHHHHHHCCCCEEEEEE--CCHH----HHHHHHHHH-HHHHCCCCEEEEECCEEEEECCCCCHHHHHHHH
T ss_conf 741165533667777402661389996--6889----999999999-998456613788524067624776505778887
Q ss_pred HHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 999818588789997329999259997399998748
Q 002468 757 ILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 757 Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
+++.++ .+.+.+++||| +.||.+||+.+.
T Consensus 215 l~~~~~------i~~~~vi~~GD-~~ND~~Ml~~a~ 243 (283)
T d2b30a1 215 LLKHYN------ISNDQVLVVGD-AENDIAMLSNFK 243 (283)
T ss_dssp HHHHTT------CCGGGEEEEEC-SGGGHHHHHSCS
T ss_pred HHHHCC------CCCCEEEEECC-CHHHHHHHHHCC
T ss_conf 766410------02020799648-763699998589
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.90 E-value=7.4e-23 Score=157.29 Aligned_cols=187 Identities=12% Similarity=0.145 Sum_probs=121.6
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC----CEEE
Q ss_conf 792999926865589988999887620101246796599999994109998099985899665999720029----5399
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 646 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~----l~li 646 (918)
++.||++|+||||++. ...+ +..+.+.++.+ .+..|+|+|||++..+.++++.++ .+++
T Consensus 2 ~~~li~~DlDGTL~~~--------------~~~~--~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGD--------------QQAL--EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSC--------------HHHH--HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CCEEEEEECCCCCCCC--------------CCCH--HHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 7669999896667999--------------9898--99999999981-99989998899989999999973998776588
Q ss_pred EECCEEEEECCCE---EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE----EEECCCEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 1274699953981---43305655795789999999999880499815----5210212799841357466589999999
Q 002468 647 AENGMFLRCTTGK---WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH----FEQRETSLVWNYKYADVEFGRIQARDML 719 (918)
Q Consensus 647 aenG~~i~~~~~~---w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~----iE~K~~si~~hyr~ad~e~~~~qa~el~ 719 (918)
++||+.+....+. |.... ...|. ..++..+....++.. .+.....+.+++.....+.. ...+.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYL----SEHWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTV---IDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHH----HTTCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHH---HHHHH
T ss_pred ECCCEEEEECCCCCHHHHHHH----HHHHH---HHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCHHH---HHHHH
T ss_conf 516259997167416789888----78876---879999985355433257244062689995252115899---99999
Q ss_pred HHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 99731998999769998490999996999999999999998185887899973299992599973999987485
Q 002468 720 QHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 720 ~~L~~~~~~~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
..+ ..... .......+.+.+||.|++++||.|++.|++.++ .+.+.+++||| +.||++||+.+..
T Consensus 135 ~~~-~~~~~-~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~Ml~~~~~ 199 (244)
T d1s2oa1 135 EML-KETGI-PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSAR 199 (244)
T ss_dssp HHH-HTSSC-CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSE
T ss_pred HHH-HHHCC-CCEEEECCCCEEEEEECCCCHHHHHHHHHHHCC------CCHHHEEEECC-CCCCHHHHHHCCC
T ss_conf 999-86323-412663078189998676415577888877415------77303799758-8877999961891
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=2.2e-21 Score=148.16 Aligned_cols=182 Identities=16% Similarity=0.147 Sum_probs=123.9
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC--CCEEEEEC
Q ss_conf 9299992686558998899988762010124679659999999410999809998589966599972002--95399127
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 649 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~--~l~liaen 649 (918)
.|+|+||+||||++. ...+++++.++|++|.+ .+..++++|||+...+......+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred EEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 089999658877389--------------99479999999999987-799899982886032699999819885288604
Q ss_pred CEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEE-EECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 4699953981433056557957899999999998804998155-210212799841357466589999999997319989
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 728 (918)
Q Consensus 650 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i-E~K~~si~~hyr~ad~e~~~~qa~el~~~L~~~~~~ 728 (918)
|+.+...++...... .. +.+...++....+..-..+ ..+.....+.+. .+++ +...+...+ .
T Consensus 68 G~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~-~---- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----SN---EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDPE----DVDYVRKEA-E---- 130 (225)
T ss_dssp GTEEECTTSCEEESS----CS---HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCGG----GHHHHHHHH-H----
T ss_pred CEEEEECCCCEEEEC----CH---HHHHHHHHHHHHHCCCCEEECCCCEEEEECCC-CCHH----HHHHHHHHH-H----
T ss_conf 169996795178736----86---89999999998734854242032202310023-5899----999999987-4----
Q ss_pred CCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9976999849099999699999999999999818588789997329999259997399998748
Q 002468 729 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 729 ~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
...+.+..+...+|+.|++++||.++++|+++++ .+.+.+++||| +.||.+||+.+.
T Consensus 131 ~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m~~~a~ 187 (225)
T d1l6ra_ 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 187 (225)
T ss_dssp TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred HCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHC------CCHHHEEEECC-CCCHHHHHHHCC
T ss_conf 2572999889179963876522789998766510------02302256448-843599999779
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.86 E-value=1e-20 Score=143.92 Aligned_cols=181 Identities=17% Similarity=0.091 Sum_probs=110.5
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC--CEEEEEC
Q ss_conf 92999926865589988999887620101246796599999994109998099985899665999720029--5399127
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~--l~liaen 649 (918)
.|+||+|+||||++. . .+++++++|++|.+ .|..++++|||++..+..++..++ ..++++|
T Consensus 2 iKli~~DlDGTLl~~--------------~--~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPG--------------Y--EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSS--------------S--CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred CEEEEEECCCCCCCC--------------C--CCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 379999277777899--------------9--88899999999998-899999991988899999999836442100147
Q ss_pred CEEEEECCCEEEE-ECC--------CCCCHHHHHHHHHHHHH---HHHCCCCCEEE-------------------ECCCE
Q ss_conf 4699953981433-056--------55795789999999999---88049981552-------------------10212
Q 002468 650 GMFLRCTTGKWMT-TMP--------EHLNMEWVDSLKHVFEY---FTERTPRSHFE-------------------QRETS 698 (918)
Q Consensus 650 G~~i~~~~~~w~~-~~~--------~~~~~~w~~~v~~il~~---~~~r~~Gs~iE-------------------~K~~s 698 (918)
|+.+...++.... ... ...... ...+...+.. ........... .+...
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS 143 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred CCEEECCCCCEECCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 8489708984303543067788999987521-999999997655311210031344888877624764677888863134
Q ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 79984135746658999999999731998999769998490999996999999999999998185887899973299992
Q 002468 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 699 i~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iG 778 (918)
......... . ..+.... ..+.+..+ ..+++.|.+++||.|++.++++++. .+.+.++|||
T Consensus 144 ~~~~~~~~~-~-----~~~~~~~--------~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a~G 203 (243)
T d1wzca1 144 ETIFEWSRD-G-----WEEVLVE--------GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYAVG 203 (243)
T ss_dssp EEECBCSSS-C-----HHHHHHH--------TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEEEE
T ss_pred HHHHHHHHH-H-----HHHHHHH--------CCEEEEEC-CCCCCHHHHHCCHHHHHHHHHHHCC-----CCCCCEEEEC
T ss_conf 113444467-8-----9986552--------37688423-6530010311007799999998359-----9914199984
Q ss_pred CCCCCCHHHHHHC
Q ss_conf 5999739999874
Q 002468 779 HFLGKDEDVYAFF 791 (918)
Q Consensus 779 D~d~tDEdMF~~~ 791 (918)
| +.||.+||+++
T Consensus 204 D-~~ND~~Ml~~a 215 (243)
T d1wzca1 204 D-SYNDFPMFEVV 215 (243)
T ss_dssp C-SGGGHHHHTTS
T ss_pred C-CHHHHHHHHCC
T ss_conf 9-88589999849
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.4e-20 Score=141.71 Aligned_cols=195 Identities=16% Similarity=0.207 Sum_probs=113.7
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCC----CCEEE
Q ss_conf 79299992686558998899988762010124679659999999410999809998589966599972002----95399
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 646 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~----~l~li 646 (918)
..||++||+||||++. ...++++++++|++|.+ ++.++++|||....+...+... ..+.+
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEECCCCCEECC--------------CCCCCHHHHHHHHHHHC--CCCEEEECCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 9879998674782089--------------99489999999999980--9989999589868867887652165642995
Q ss_pred EECCEEEEECCCE-EEEECCCCCCHHHHH-HHHHHHHHHHHCCCC----CEEEECCCEEEEEEECC--CHHHH-------
Q ss_conf 1274699953981-433056557957899-999999998804998----15521021279984135--74665-------
Q 002468 647 AENGMFLRCTTGK-WMTTMPEHLNMEWVD-SLKHVFEYFTERTPR----SHFEQRETSLVWNYKYA--DVEFG------- 711 (918)
Q Consensus 647 aenG~~i~~~~~~-w~~~~~~~~~~~w~~-~v~~il~~~~~r~~G----s~iE~K~~si~~hyr~a--d~e~~------- 711 (918)
+.+|+++...++. +.............. ............... ...+.......+..... +....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 27479993388511100012888888988887640001000145312220223101121122222235423301232110
Q ss_pred --HHHHHHHHHHHHCCCCCCCCEEE-EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC----CC
Q ss_conf --89999999997319989997699-984909999969999999999999981858878999732999925999----73
Q 002468 712 --RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----KD 784 (918)
Q Consensus 712 --~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~----tD 784 (918)
.....+....+ ........+.+ ..+..++||.|+++|||.|+++|++ ++.+.+++||| +. ||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~---------~~~~ev~afGD-~~~~g~ND 214 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVEN---------DGYKTIYFFGD-KTMPGGND 214 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTT---------SCCSEEEEEEC-SCC---CC
T ss_pred CCHHHHHHHHHHH-HHHHCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHC---------CCCCEEEEECC-CCCCCCCC
T ss_conf 0103358999999-9871345527995289641551321678999999848---------99362999868-99999976
Q ss_pred HHHHHHCC
Q ss_conf 99998748
Q 002468 785 EDVYAFFE 792 (918)
Q Consensus 785 EdMF~~~~ 792 (918)
++||++++
T Consensus 215 i~Ml~~~g 222 (243)
T d2amya1 215 HEIFTDPR 222 (243)
T ss_dssp CHHHHCTT
T ss_pred HHHHHCCC
T ss_conf 99997159
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=6.8e-20 Score=138.86 Aligned_cols=193 Identities=14% Similarity=0.128 Sum_probs=117.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC---CEEEE
Q ss_conf 792999926865589988999887620101246796599999994109998099985899665999720029---53991
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAA 647 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~---l~lia 647 (918)
++.|||+|+||||++. ...++++++++|++|.+ .|..++++|||+...+.+.+..++ ..+++
T Consensus 3 ~~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~ 67 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIA 67 (232)
T ss_dssp CCEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEE
T ss_pred CCEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHCHHHHHHHCCCCCEEEC
T ss_conf 9879999788875289--------------69479999999999997-79989999689736530688873457845971
Q ss_pred ECCEEEEECCCE-EEE---ECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE----------------------CCCEEEE
Q ss_conf 274699953981-433---05655795789999999999880499815521----------------------0212799
Q 002468 648 ENGMFLRCTTGK-WMT---TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ----------------------RETSLVW 701 (918)
Q Consensus 648 enG~~i~~~~~~-w~~---~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~----------------------K~~si~~ 701 (918)
+||+.+...... ... .........+.............. ....... .......
T Consensus 68 ~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
T d1xvia_ 68 ENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHF-KFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTL 146 (232)
T ss_dssp GGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHHHHHHHHCC-CEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEE
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEE
T ss_conf 6976999357753120145555577899998765422222021-212332023555433310230134554411124531
Q ss_pred EEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 84135746658999999999731998999769998490999996999999999999998185887899973299992599
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 781 (918)
Q Consensus 702 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d 781 (918)
... ...+ ......... ......+..+...+++.|++++||.|++.|++.+..- ..+.+.+++||| +
T Consensus 147 ~~~-~~~~----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l---~i~~~~~iafGD-~ 212 (232)
T d1xvia_ 147 IWR-DSDE----RMAQFTARL-----NELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQL---SGKRPTTLGLGD-G 212 (232)
T ss_dssp EEC-SCHH----HHHHHHHHH-----HHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHH---HSSCCEEEEEES-S
T ss_pred CCC-CCHH----HHHHHHHHH-----HHCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHC---CCCHHCEEEECC-C
T ss_conf 022-5299----998899876-----5305503322530221478851789999999999975---989521999849-7
Q ss_pred CCCHHHHHHCCC
Q ss_conf 973999987485
Q 002468 782 GKDEDVYAFFEP 793 (918)
Q Consensus 782 ~tDEdMF~~~~~ 793 (918)
.||.+||+++..
T Consensus 213 ~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 213 PNDAPLLEVMDY 224 (232)
T ss_dssp GGGHHHHHTSSE
T ss_pred HHHHHHHHHCCE
T ss_conf 868999981990
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.8e-18 Score=129.99 Aligned_cols=193 Identities=20% Similarity=0.230 Sum_probs=106.9
Q ss_pred EEEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH-CCC-----CCEE
Q ss_conf 2999-92686558998899988762010124679659999999410999809998589966599972-002-----9539
Q 002468 573 RLLI-LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF-QEY-----NLWL 645 (918)
Q Consensus 573 rLi~-lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~-~~~-----~l~l 645 (918)
|+|+ ||+||||++. ...++++++++|++|.+ .| .++++|||........+ ..+ ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEECCCCCCCCC--------------CCCCCHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHHHHHHHCCCCCCCEE
T ss_conf 979998445683499--------------89589999999999986-89-999996698065134566542334554223
Q ss_pred EEECCEEEEECCCE-EEEECCCCCCHHHHHHH-HHHHHHHHHCCCC----CEEEECCCEEEEEEECCCHH------HHH-
Q ss_conf 91274699953981-43305655795789999-9999998804998----15521021279984135746------658-
Q 002468 646 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSL-KHVFEYFTERTPR----SHFEQRETSLVWNYKYADVE------FGR- 712 (918)
Q Consensus 646 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v-~~il~~~~~r~~G----s~iE~K~~si~~hyr~ad~e------~~~- 712 (918)
++.+|.++...+.. +................ ............. .+.........++....... +..
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ECCCCEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 11440023037851212013577766677777764233310110221124212344444202322333203454566653
Q ss_pred ----HHHHHHHHHHHCCCCCCCCEEEE-ECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC----C
Q ss_conf ----99999999973199899976999-84909999969999999999999981858878999732999925999----7
Q 002468 713 ----IQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----K 783 (918)
Q Consensus 713 ----~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~----t 783 (918)
....+....+ ........+.+. .+..++||.|+++|||.|++.|++. +.+.+++||| +. |
T Consensus 145 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~~---------~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---------SFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTS---------CCSEEEEEES-CCSTTST
T ss_pred CCCHHHHHHHHHHH-HHHHHCCCEEEEECCCCCCEECCHHCCHHHHHHHHHCC---------CHHHEEEECC-CCCCCCC
T ss_conf 00103678889999-98851034267641676003203220278999999669---------8445999868-8999997
Q ss_pred CHHHHHHCC
Q ss_conf 399998748
Q 002468 784 DEDVYAFFE 792 (918)
Q Consensus 784 DEdMF~~~~ 792 (918)
|++||++++
T Consensus 214 D~eml~~a~ 222 (244)
T d2fuea1 214 DFEIFADPR 222 (244)
T ss_dssp THHHHHSTT
T ss_pred CHHHHHCCC
T ss_conf 299997179
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.81 E-value=8.5e-19 Score=132.02 Aligned_cols=145 Identities=19% Similarity=0.222 Sum_probs=113.3
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 80899970544458978999999997886847558578999974999992779999999999998640346987844399
Q 002468 344 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 423 (918)
Q Consensus 344 ~~iIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~ 423 (918)
...+++|||+++.||+..+++|+.++ |+. .|+++|..+ +.+.+..+..++.+.. ...|+
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~----~l~ivg~~~--~~~~~~~~~~~~~~~~-----------~~~v~ 70 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFS--KGDHAERYARKIMKIA-----------PDNVK 70 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCC--TTSTHHHHHHHHHHHS-----------CTTEE
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHH----CCC----EEEEEEECC--CCCCHHHHHHHHCCCC-----------CCCEE
T ss_conf 99999992375434999999999983----397----499997224--4542233332202356-----------67588
Q ss_pred EECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHC--CCCEEEECCCCHHHHHHH
Q ss_conf 957989988999999875689978997668826999987048998439992987801210--487399999999999999
Q 002468 424 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANA 501 (918)
Q Consensus 424 ~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~l--g~~allVnP~D~~~lA~a 501 (918)
+ .|.++.+++..+|+.||+++.||..||++++.+|||+|+ .|+|+|+.+|..+.+ +.+|+.+++ |+++++++
T Consensus 71 ~-~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~ 144 (166)
T d2f9fa1 71 F-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDA 144 (166)
T ss_dssp E-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHH
T ss_pred E-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHH
T ss_conf 7-421221112222222222332122112332211011223----32205527864033048841246899-99999999
Q ss_pred HHHHHCCCHHHHHH
Q ss_conf 99995399999999
Q 002468 502 IARALNMSPEEREK 515 (918)
Q Consensus 502 i~~aL~m~~~er~~ 515 (918)
|..++.++...++.
T Consensus 145 i~~l~~~~~~~~~~ 158 (166)
T d2f9fa1 145 MKKVSKNPDKFKKD 158 (166)
T ss_dssp HHHHHHCTTTTHHH
T ss_pred HHHHHHCHHHHHHH
T ss_conf 99998099999999
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.90 E-value=3.6e-11 Score=84.53 Aligned_cols=164 Identities=13% Similarity=0.090 Sum_probs=80.3
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCE
Q ss_conf 92999926865589988999887620101246796599999994109998099985899665999720029539912746
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 651 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~liaenG~ 651 (918)
.||++||+||||++. .++++++..|..++++|||+.-....++.. .+.+..++|.
T Consensus 2 mkli~fDlDGTLl~e------------------------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~-~v~ll~~~~~ 56 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------------------------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ-RLRILDEHGL 56 (206)
T ss_dssp CEEEEEESBTTTBCC------------------------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH-HHHHHHHTTC
T ss_pred CEEEEECCCCCHHHH------------------------HHHHHHHHCCCHHHHHHCCCCCCHHHHHHH-HHHHHHHCCC
T ss_conf 579998686551999------------------------999999985989899877999888999999-9999971787
Q ss_pred EEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99953981433056557957899999999998804998155210212799841357466589999999997319989997
Q 002468 652 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 731 (918)
Q Consensus 652 ~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~si~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~ 731 (918)
....-...+.... ... ........... +... ..+.-.+. . ........+ .. ....
T Consensus 57 ~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~---~~~~----~~~s~~~~----~----~~~~~~~~~-~~--~~~~ 111 (206)
T d1rkua_ 57 KLGDIQEVIATLK--PLE-----GAVEFVDWLRE---RFQV----VILSDTFY----E----FSQPLMRQL-GF--PTLL 111 (206)
T ss_dssp CHHHHHHHHTTCC--CCT-----THHHHHHHHHT---TSEE----EEEEEEEH----H----HHHHHHHHT-TC--CCEE
T ss_pred CEEHHHHHHHHCC--CCC-----HHHHHHHHHHC---CCEE----EEECCCCH----H----HHHHHHHHH-CC--CHHH
T ss_conf 3003565542025--562-----48899988604---7468----88516713----8----888999984-78--3333
Q ss_pred EEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 6999849099999699999999999999818588789997329999259997399998748
Q 002468 732 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 732 v~v~~g~~~vEI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
..................|+.....+++.++ .+.+.++|||| +.||.+||++++
T Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~Ml~~Ag 165 (206)
T d1rkua_ 112 CHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTMLSEAH 165 (206)
T ss_dssp EEEEEECTTSCEEEEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHHHHHSS
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHC------CCCCCEEEECC-CCCCHHHHHHCC
T ss_conf 1102562144454321120145788999864------25652188438-732799998589
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.31 E-value=3.9e-07 Score=59.46 Aligned_cols=39 Identities=15% Similarity=0.277 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999818588789997329999259997399998748
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 747 gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
+..|+.++..+++.++ .+++.++++|| +.+|..|.+.+.
T Consensus 143 ~~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Dl~~a~~A~ 181 (226)
T d2feaa1 143 SNQCGCCKPSVIHELS------EPNQYIIMIGD-SVTDVEAAKLSD 181 (226)
T ss_dssp CSCCSSCHHHHHHHHC------CTTCEEEEEEC-CGGGHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHC------CCCCEEEEEEC-CHHHHHHHHHCC
T ss_conf 5678999999999846------78863899807-631399999889
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.24 E-value=6.8e-07 Score=57.96 Aligned_cols=58 Identities=16% Similarity=0.202 Sum_probs=43.4
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC---CCCHHHHHHHHCCCCCE
Q ss_conf 792999926865589988999887620101246796599999994109998099985---89966599972002953
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNLW 644 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~~~l~ 644 (918)
+.++++||+||||.+. . .+-+.+.++|++|.+ .+..++++| +|+...+...+..+++.
T Consensus 6 ~ik~vlFDlDGTL~~~--------------~-~~i~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 6 KIELFILDMDGTFYLD--------------D-SLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp GCCEEEECCBTTTEET--------------T-EECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred HCCEEEEECCCEEEEC--------------C-CCCCHHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 4999999598856879--------------9-168319999999997-69988999589999989999999852356
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.12 E-value=1.4e-05 Score=49.71 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=38.9
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC---CCHHHHHHHHCC
Q ss_conf 929999268655899889998876201012467965999999941099980999858---996659997200
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQE 640 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~~~~ 640 (918)
-++++||+||||.+. .. +-+.+.++|++|.+ .|..++++|+ |+...+.+.+..
T Consensus 2 yk~v~fDlDGTL~~~--------------~~-~i~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L~~ 57 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLG--------------KE-PIPAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLAN 57 (253)
T ss_dssp CCEEEECCBTTTEET--------------TE-ECHHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCEEC--------------CC-CCCCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 899999088800829--------------97-58019999999997-7997899808999998999988898
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=5e-06 Score=52.54 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=43.5
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC---CCCHHHHHHHHCCCCC
Q ss_conf 792999926865589988999887620101246796599999994109998099985---8996659997200295
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL 643 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~~~l 643 (918)
+.|+++||+||||.+. ...+ +...++|++|.+ .|..|+++| +|+...+.+.+..+++
T Consensus 2 ~ik~VifDlDGTL~~~--------------~~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 2 TIKNVICDIDGVLMHD--------------NVAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp CCCEEEEECBTTTEET--------------TEEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCEEEEC--------------CCCC-CCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 8879999799801879--------------9858-209999999997-7995899928999999999888763035
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=2.8e-05 Score=47.86 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999818588789997329999259997399998748
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 747 gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
+..|+.+++.+.... +++.++++|| +.||..|++.+.
T Consensus 151 ~~~K~~~v~~~~~~~--------~~~~~~~vGD-s~~Di~~~~~ag 187 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF--------HFKKIIMIGD-GATDMEACPPAD 187 (217)
T ss_dssp TTHHHHHHHHHHHHH--------CCSCEEEEES-SHHHHTTTTTSS
T ss_pred CCHHHHHHHHHHHCC--------CCCCCEEEEE-CHHHHHHHHHCC
T ss_conf 220899999998634--------8666389971-786599898689
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.87 E-value=2.2e-05 Score=48.56 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=44.7
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCH
Q ss_conf 227929999268655899889998876201012467965999999941099980999858996
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 569 ~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~ 631 (918)
.++.+.++||+||||++...........+ ....+-|.+++.|+.|.+ .|..|+++|||+.
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~--~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKC--DTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGG--GGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCC--CCCCCCHHHHHHHHHHHH-CCCEEEEEECCCH
T ss_conf 99996899974888382789875773330--408448789999999984-4480899926857
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.54 E-value=2.1e-05 Score=48.74 Aligned_cols=53 Identities=6% Similarity=0.159 Sum_probs=40.1
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC---CCHHHHHHHHCC
Q ss_conf 929999268655899889998876201012467965999999941099980999858---996659997200
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQE 640 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~~~~ 640 (918)
-+.++||+||||.+. . .+-+...++|++|.+ .+..++++|+ |+...+.+.+..
T Consensus 2 yk~vlFDlDGTL~~~--------------~-~~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~~ 57 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKG--------------K-DRIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLAT 57 (253)
T ss_dssp CCEEEEECBTTTEET--------------T-EECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCCEEEC--------------C-CCCCCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 699999286820889--------------9-838149999999997-7997899948998999999999986
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.33 E-value=0.00022 Score=42.38 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=44.9
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHH---HHHCCCCC
Q ss_conf 99992686558998899988762010124679659999999410999809998589966599---97200295
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNL 643 (918)
Q Consensus 574 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~---~~~~~~~l 643 (918)
-|++|+||||+... .+ ....|-+.+++.|++|.+ .|+.++|.|+|+..... .|+...++
T Consensus 2 ti~vDiDGTl~~~~-~~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 2 TIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp EEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred EEEEECCCCCCCCC-CC---------CCCCCCHHHHHHHHHHHH-CCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 89997579708899-97---------636645999999999998-7996999935888653889999998199
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.32 E-value=0.00058 Score=39.70 Aligned_cols=44 Identities=14% Similarity=0.041 Sum_probs=37.9
Q ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 996999999999999998185887899973299992599973999987485
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
+.....+|..+++.++++++ .+++.++|+|| |.||.+||+.+..
T Consensus 74 ~~~~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~l~~~g~ 117 (177)
T d1k1ea_ 74 FFLGKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 117 (177)
T ss_dssp EEESCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CCCCCCCHHHHHHHHHHHHC------CCCCEEEEECC-CCCHHHHHHHCCE
T ss_conf 11013638889999999866------77522577058-8407899966892
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.25 E-value=0.00037 Score=40.96 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=46.0
Q ss_pred EEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCH---------------HHHHH
Q ss_conf 29999268655899889-998876201012467965999999941099980999858996---------------65999
Q 002468 573 RLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---------------NVLDK 636 (918)
Q Consensus 573 rLi~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~---------------~~L~~ 636 (918)
+-|++|+||||+...+. + ..+.|-+.+++.|..|.+ .|+.++|.|+|.. ....+
T Consensus 2 K~i~~DiDGTI~~~~~~~y---------~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~ 71 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDY---------RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRTYEGNVGKINIHTLPIITE 71 (124)
T ss_dssp CEEEECSTTTTBCCCCSCG---------GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHH
T ss_pred CEEEEECCCCEECCCCCCC---------CCCCCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999937887288999982---------736848999999999998-799899995687545577577878889999999
Q ss_pred HHCCCCC
Q ss_conf 7200295
Q 002468 637 NFQEYNL 643 (918)
Q Consensus 637 ~~~~~~l 643 (918)
|+...++
T Consensus 72 wL~~~gI 78 (124)
T d1xpja_ 72 WLDKHQV 78 (124)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
T ss_conf 9998299
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.92 E-value=0.001 Score=38.21 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHC
Q ss_conf 99999999999981858878999732999925999739999874
Q 002468 748 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 748 vnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~ 791 (918)
-.|...+..+++.++ .+++.+++||| ...|..+=+.+
T Consensus 98 kp~~~~~~~~~~~~~------~~~~~~l~igD-~~~di~aA~~a 134 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTG------VPFSQMVFFDD-ENRNIIDVGRL 134 (164)
T ss_dssp SCHHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHC------CCHHHEEEECC-CHHHHHHHHHC
T ss_conf 897699999999968------88699798748-78789999986
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.85 E-value=0.00075 Score=39.02 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=40.1
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 792999926865589988999887620101246796599999994109998099985899
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~ 630 (918)
.+|++|||.||||........ ..... ....+.|.+.++|+.|.+ .|..++|+|..+
T Consensus 1 ~~K~i~~D~DGtL~~~~~~~~-~~~~~--~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 1 SQKYLFIDRDGTLISEPPSDF-QVDRF--DKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CCEEEEECCBTTTBCCC--CC-CCCSG--GGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CCCEEEEECCCCEEEECCCCC-CCCCH--HHCEECCCHHHHHHHHHH-CCCCEEEECCCC
T ss_conf 981999918897673579887-42888--990687559999999987-387301104643
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.72 E-value=0.00041 Score=40.66 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=37.3
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 9996999999999999998185887899973299992599973999987485
Q 002468 742 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 742 EI~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
+....+..|+.++..+++.++ .+++.+++||| +.||.+|+++++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m~~~ag~ 179 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 179 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHHHCSE
T ss_pred CCCCCCCCCCCHHHHHHHHHC------CCCCCEEEECC-CCCHHHHHHHCCC
T ss_conf 211112345410335788846------66554178637-8474999998898
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.59 E-value=0.0017 Score=36.86 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=19.2
Q ss_pred CCCCCEECCCHHHHHHHHHHHHH
Q ss_conf 98431441898899999999773
Q 002468 884 RTNARFLLQSSDEVVSFLKKLAD 906 (918)
Q Consensus 884 ~t~A~~~l~~~~~V~~~L~~L~~ 906 (918)
...|.|.+++..|+..+|..|.+
T Consensus 206 ~~~ad~vi~~~~el~~~l~~l~~ 228 (228)
T d2hcfa1 206 RHKPGTLFKNFAETDEVLASILT 228 (228)
T ss_dssp TTCCSEEESCSCCHHHHHHHHHC
T ss_pred HCCCCEEECCHHHHHHHHHHHHC
T ss_conf 58999998999999999999719
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.0038 Score=34.62 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=40.4
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCH
Q ss_conf 929999268655899889998876201012467965999999941099980999858996
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~ 631 (918)
.+++|||.||||........ +. ++.++-|.+.++|+.|.+ .|..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~----~~--~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVH----EI--DNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCC----SG--GGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEECCCCCCCCCCCCC----CH--HHEEECCCHHHHHHHHHH-CCCHHHHHHCCCH
T ss_conf 98899948998548899899----88--993688789999999866-1841666642202
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.06 E-value=0.0033 Score=34.99 Aligned_cols=54 Identities=19% Similarity=0.304 Sum_probs=40.7
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 2792999926865589988999887620101246796599999994109998099985899
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 570 s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~ 630 (918)
.+.+.||||.||||....+.+. .. .+.++-|.+.++|++|.+ .|..++|+|..+
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~----~~--~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPS----DP--AEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTT----CG--GGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCCEEEEECCCCEECCCCCCC----CH--HHEEECCCHHHHHHHHHH-HCCEEEEECCCC
T ss_conf 8797899959997478899999----99--992763448999999986-297579861654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=96.05 E-value=0.033 Score=28.79 Aligned_cols=157 Identities=10% Similarity=-0.031 Sum_probs=84.8
Q ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 69808999705444589789999999978868475585789999749999927799999999999986403469878443
Q 002468 342 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421 (918)
Q Consensus 342 ~~~~iIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~p 421 (918)
.+++.++........++...+.......+...+.. + ++ ..... .... . ... ..
T Consensus 219 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~-~~-~~~~~-~~~~----------------~---~~~--~~ 271 (391)
T d1pn3a_ 219 AGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRR---I-VL-SRGWA-DLVL----------------P---DDG--AD 271 (391)
T ss_dssp SSSCCEEEECTTCCSTHHHHHHHHHHHHHHHTTCC---E-EE-ECTTT-TCCC----------------S---SCC--TT
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCE---E-EE-ECCCC-CCCC----------------C---CCC--CC
T ss_conf 58972787224312232789999999999856977---9-99-43643-3344----------------5---688--98
Q ss_pred EEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCC--------HHHC--CCCEEEEC
Q ss_conf 9995798998899999987568997899766882699998704899843999298780--------1210--48739999
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVN 491 (918)
Q Consensus 422 V~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG~--------~e~l--g~~allVn 491 (918)
+ ++.+++++.+ ++..+|++|..+ |. .+..|+|+|+ .|+|+.-+.+- ++.+ ...|+.++
T Consensus 272 v-~i~~~~p~~~---ll~~a~~~v~hg---G~-~t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~ 339 (391)
T d1pn3a_ 272 C-FVVGEVNLQE---LFGRVAAAIHHD---SA-GTTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVD 339 (391)
T ss_dssp C-CEESSCCHHH---HHTTSSCEEEES---CH-HHHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEEC
T ss_pred E-EEECCCCHHH---HHHHCCEEEECC---CH-HHHHHHHHHC----CCEEEECCCCCCCCHHHHHHHHHHHCCCEEECC
T ss_conf 8-9954468799---984254898527---43-7999999828----868993355677452999999999879889768
Q ss_pred CC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 99--99999999999953999999999998978998628999999999999
Q 002468 492 PW--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 492 P~--D~~~lA~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 540 (918)
+. +.++++++|.++|+.+. +++.+++.+.+.......-++.+.+.+
T Consensus 340 ~~~~~~~~l~~~i~~~l~~~~---r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 340 GPVPTIDSLSAALDTALAPEI---RARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp CSSCCHHHHHHHHHHHTSTTH---HHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 578999999999999839999---999999999988527999999999998
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=95.86 E-value=0.0055 Score=33.65 Aligned_cols=40 Identities=10% Similarity=-0.121 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 99999999999998185887899973299992599973999987485
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 747 gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
.-.|......+++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 150 ~kp~p~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~A~~aG~ 189 (224)
T d2hsza1 150 IKPHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFAAHSAGC 189 (224)
T ss_dssp CTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHH------HHHHCCCHHCC-CHHHHHHHHHCCC
T ss_conf 4321013578998864------31100202117-6989999999099
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.09 E-value=0.0077 Score=32.72 Aligned_cols=55 Identities=15% Similarity=0.292 Sum_probs=38.1
Q ss_pred HCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 22792999926865589988---9998876201012-46796599999994109998099985899
Q 002468 569 RSNNRLLILGFNATLTEPVD---TPGRRGDQIREME-LKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 569 ~s~~rLi~lD~DGTL~~~~~---~p~~~~~~~~~~~-~~~~~~~~~~L~~L~~d~~~~V~IvSGR~ 630 (918)
..+.+.++||.||||..... .+. .. .+ ..+.+.+.++|+.|.+ .|..++|+|.-+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~-~~-----~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPT-SP-----SDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 76 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCS-ST-----TCCEESCTTHHHHHHHHHH-HTCEEEEEEECH
T ss_pred CCCCCEEEEECCCCEEEECCCCCCCC-CH-----HHCEECCCCHHHHHHHHHH-CCCEEEEECCCC
T ss_conf 87680899978995175489986789-84-----6634516779999999986-784799952763
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.021 Score=30.06 Aligned_cols=37 Identities=3% Similarity=-0.253 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 99999999998185887899973299992599973999987485
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
+....+.+++.++ .+++.+++||| ..+|..|=+.++-
T Consensus 146 ~~~~~~~~~~~l~------~~~~~~l~igD-~~~di~aA~~~G~ 182 (218)
T d1te2a_ 146 HPQVYLDCAAKLG------VDPLTCVALED-SVNGMIASKAARM 182 (218)
T ss_dssp STHHHHHHHHHHT------SCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCC------CCCHHCEEEEE-CHHHHHHHHHCCC
T ss_conf 5789999999729------99513089960-9899999998399
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.04 E-value=0.012 Score=31.53 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 99999999999818588789997329999259997399998748
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
-+...++.++++++ .+++.+++||| ..+|..+=+.++
T Consensus 138 P~p~~~~~~~~~~~------~~~~~~l~VgD-s~~Di~~a~~aG 174 (207)
T d2hdoa1 138 PDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQTAQAAN 174 (207)
T ss_dssp TSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCEE------EECCCEEEECC-CHHHHHHHHHCC
T ss_conf 34443002342104------51134068547-787899999849
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=94.91 E-value=0.023 Score=29.75 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=46.2
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 27929999268655899889998876201012467965999999941099980999858996659997200295
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 570 s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 643 (918)
.+.++|++|+||+|++-.-.- ..... ........--..+..|.. .+..++++||+...........+++
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~---~~dG~-e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHY---DANGE-AIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEE---ETTEE-EEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCCCCEEEE---ECCCC-EEEEEECCCHHHHHHHHH-HCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 237199981677506886999---38997-999997760488878765-2178999669844678998763212
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=94.11 E-value=0.13 Score=25.16 Aligned_cols=103 Identities=14% Similarity=0.042 Sum_probs=65.2
Q ss_pred CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC----CHHHC--CCCEEEECCC-
Q ss_conf 3999579899889999998756899789976688269999870489984399929878----01210--4873999999-
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW- 493 (918)
Q Consensus 421 pV~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG----~~e~l--g~~allVnP~- 493 (918)
.++ +.+++++.++ +..+|+++. .|-..+..|+++++ .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 287 ~v~-~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 287 DCF-AIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp TEE-EESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CEE-EEECCCCHHH---HHHCCEEEE----CCCCHHHHHHHHHC----CCEEEECCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 889-9731481777---621248886----17724899999839----99898066120899999999879889757478
Q ss_pred -CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf -999999999999539999999999989789986289999999999
Q 002468 494 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 494 -D~~~lA~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 538 (918)
+.+.++++|.++|+ + +-+++.++..+.+.......-++..++
T Consensus 355 ~~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ie~ 397 (401)
T d1rrva_ 355 PTFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADLVLA 397 (401)
T ss_dssp CCHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHC--H-HHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 999999999999849--7-999999999998755179999999999
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.89 E-value=0.11 Score=25.52 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999818588789997329999259997399998748
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 747 gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
+--+..+....++.++ .+++.+++||| ..+|..+=+.++
T Consensus 183 ~KP~p~~~~~~~~~~~------~~p~~~l~vgD-~~~dv~aA~~aG 221 (253)
T d1zs9a1 183 HKVESESYRKIADSIG------CSTNNILFLTD-VTREASAAEEAD 221 (253)
T ss_dssp CTTCHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHC------CCCCCEEEEEC-CHHHHHHHHHCC
T ss_conf 5778088899999948------99674899947-999999999859
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.70 E-value=0.023 Score=29.80 Aligned_cols=72 Identities=8% Similarity=-0.042 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---------CCCC-----CCCC------CCCCCCCCHHHHHHHHHHHCC
Q ss_conf 6678999998227929999268655899889---------9988-----7620------101246796599999994109
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDT---------PGRR-----GDQI------REMELKLHPDLKQPLNALCHD 618 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~---------p~~~-----~~~~------~~~~~~~~~~~~~~L~~L~~d 618 (918)
.+.++.+.+...+...|+||+|-|+++..+. |... ...+ -+..+.+-+.+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~- 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred EHHHHHHHCCCCCCCEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH-
T ss_conf 7888887557999846897031443238388876654037676655678741387761244346766249999999997-
Q ss_pred CCCCEEEECCCCH
Q ss_conf 9980999858996
Q 002468 619 PKTTIVVLSGSDR 631 (918)
Q Consensus 619 ~~~~V~IvSGR~~ 631 (918)
.|..|+.||||+.
T Consensus 101 ~Gv~IfyVTnR~~ 113 (209)
T d2b82a1 101 RGDAIFFVTGRSP 113 (209)
T ss_dssp HTCEEEEEECSCC
T ss_pred CCCEEEEEECCCH
T ss_conf 5974999938845
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.45 E-value=0.049 Score=27.71 Aligned_cols=33 Identities=15% Similarity=-0.004 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 999999999818588789997329999259997399998748
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
....+.+++.++ ++.+++||| ..+|..+-+.++
T Consensus 137 p~~~~~~~~~~~--------~~~~l~vgD-s~~Di~aA~~aG 169 (187)
T d2fi1a1 137 PESMLYLREKYQ--------ISSGLVIGD-RPIDIEAGQAAG 169 (187)
T ss_dssp CHHHHHHHHHTT--------CSSEEEEES-SHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC--------CCCEEEEEC-CHHHHHHHHHCC
T ss_conf 999999999849--------997699907-999999999859
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=92.66 E-value=0.22 Score=23.71 Aligned_cols=100 Identities=14% Similarity=0.012 Sum_probs=62.0
Q ss_pred CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC----CHHHC--CCCEEEECCC-
Q ss_conf 3999579899889999998756899789976688269999870489984399929878----01210--4873999999-
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW- 493 (918)
Q Consensus 421 pV~~l~g~v~~~el~aly~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG----~~e~l--g~~allVnP~- 493 (918)
.++ +.+++++.+ +|..+|++|. -|-..+..|+++++ .|+|+--+.+ .+..+ ...|+.+++.
T Consensus 286 nv~-~~~~~p~~~---~l~~~~~~V~----hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 286 DCF-AIGEVNHQV---LFGRVAAVIH----HGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp GEE-ECSSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CEE-EEECCCHHH---HHHHCCEEEE----CCCCHHHHHHHHHC----CCEEECCCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 789-970258799---9954589996----37716999999819----99998066141799999999879888768478
Q ss_pred -CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf -999999999999539999999999989789986289999999
Q 002468 494 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAET 535 (918)
Q Consensus 494 -D~~~lA~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 535 (918)
+.++++++|.++|+. +-+++...+.+.+.......=++.
T Consensus 354 ~~~~~l~~ai~~~l~~---~~~~~a~~~~~~~~~~~~~~aa~~ 393 (401)
T d1iira_ 354 PTFDSLSAALATALTP---ETHARATAVAGTIRTDGAAVAARL 393 (401)
T ss_dssp CCHHHHHHHHHHHTSH---HHHHHHHHHHHHSCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 9999999999999697---999999999999875083999999
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.31 E-value=0.24 Score=23.47 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=46.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 929999268655899889998876201012467965999999941099980999858996659997200295
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 572 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 643 (918)
-..+++|.+|+++-... -.+-++.++.++.|.+ .|..++++||.........-..+++
T Consensus 3 ~~~~~~d~~~~~~~g~~-------------D~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKGKP-------------DTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CCEEEEECCCCCBCSCC-------------CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEEECCCEEEEEECC-------------CCCCCCHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 89999989147997368-------------8998119999999998-5997999758633555677765422
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.49 E-value=0.04 Score=28.29 Aligned_cols=16 Identities=25% Similarity=0.683 Sum_probs=13.9
Q ss_pred CCEEEEEECCCCCCCC
Q ss_conf 7929999268655899
Q 002468 571 NNRLLILGFNATLTEP 586 (918)
Q Consensus 571 ~~rLi~lD~DGTL~~~ 586 (918)
++|+++||+||||++.
T Consensus 3 kkKlv~FDlDGTL~d~ 18 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNN 18 (210)
T ss_dssp CCCEEEECCCCCCBSS
T ss_pred CCEEEEEECCCCCCCC
T ss_conf 8759999688771791
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=91.31 E-value=0.31 Score=22.75 Aligned_cols=150 Identities=15% Similarity=0.134 Sum_probs=103.7
Q ss_pred CCEEEEEEECCCCCCCHHHHHHHHHHHH---HHCCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9808999705444589789999999978---868475-585789999749999927799999999999986403469878
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFL---EENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~iIl~VdRLd~~KGi~~~L~Af~~ll---~~~P~~-~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~ 418 (918)
+...+.++-|+...|--...+.-..++. ...|.. +..+++|..|.+..++.+. +++-+.+.+++..||..-...+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTGG
T ss_pred HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHCCCHHHCC
T ss_conf 651403434544431453035359999999850864577865999748889831789-9999999999998617855436
Q ss_pred CCCEEEECCCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHC-----CCCEEEEC
Q ss_conf 4439995798998899999987568997899--7668826999987048998439992987801210-----48739999
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 491 (918)
Q Consensus 419 ~~pV~~l~g~v~~~el~aly~~ADV~vvtSl--~EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~l-----g~~allVn 491 (918)
...|+|+. ..+-.---.+...|||.+-+|. .|.-|..-+-|+.- |++.+|..-|.--++ +.++..+-
T Consensus 604 ~~kVVFle-nYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred CEEEEEEC-CCCHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHC-----CCEEEECCCCHHHHHHHHCCCCCEEEEC
T ss_conf 33389807-87568999874401265409998734578267799985-----9716604664479888863745368806
Q ss_pred CCCHHHHHH
Q ss_conf 999999999
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
.+.+++.+
T Consensus 678 -~~~~ev~~ 685 (796)
T d1l5wa_ 678 -HTVEQVKA 685 (796)
T ss_dssp -CCHHHHHH
T ss_pred -CCHHHHHH
T ss_conf -86677788
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.82 E-value=0.21 Score=23.73 Aligned_cols=51 Identities=6% Similarity=-0.093 Sum_probs=32.9
Q ss_pred CCEEEEEE---CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 90999996---999999999999998185887899973299992599973999987485
Q 002468 738 SKSVEVRA---VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 738 ~~~vEI~p---~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
...+++.. ...+|+..+.......... .+.+.++++|| +.||..|-..+..
T Consensus 192 ~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~----~~~~~vI~iGD-s~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 192 GVLKGFKGELIHVFNKHDGALKNTDYFSQL----KDNSNIILLGD-SQGDLRMADGVAN 245 (291)
T ss_dssp SBEEEECSSCCCTTCHHHHHHTTHHHHHHT----TTCCEEEEEES-SSGGGGTTTTCSC
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCC----CCCCCEEEEEC-CHHHHHHHHCCCC
T ss_conf 268603478643456863154459988532----78676899967-7768999838854
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.04 E-value=0.24 Score=23.39 Aligned_cols=15 Identities=13% Similarity=0.401 Sum_probs=11.9
Q ss_pred CEE-EEEECCCCCCCC
Q ss_conf 929-999268655899
Q 002468 572 NRL-LILGFNATLTEP 586 (918)
Q Consensus 572 ~rL-i~lD~DGTL~~~ 586 (918)
+++ |++|+||||++.
T Consensus 2 ~~mrI~iDmDGVL~Df 17 (195)
T d1q92a_ 2 RALRVLVDMDGVLADF 17 (195)
T ss_dssp CCEEEEECSBTTTBCH
T ss_pred CCCEEEEECCCCCCCC
T ss_conf 8509999799865067
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=88.37 E-value=0.53 Score=21.29 Aligned_cols=57 Identities=9% Similarity=0.158 Sum_probs=45.7
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 29999268655899889998876201012467965999999941099980999858996659997200295
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 573 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 643 (918)
-++.+|.+|||+-..-+| |-+++.++|..|.+ .|..|+++||=........-..+++
T Consensus 3 ~~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~Gi 59 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGI 59 (168)
T ss_dssp CEEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTS
T ss_pred EEEEECCCCEEEEEECCC-------------CCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf 899978851788873488-------------96539999999998-8498999899997999999998499
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.36 E-value=0.46 Score=21.66 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=46.5
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCCCCC---------CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHC
Q ss_conf 227929999268655899889998876201---------01246796599999994109998099985899665999720
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIR---------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 639 (918)
Q Consensus 569 ~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~---------~~~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 639 (918)
.+++..+++|+|+||+.....|....+... ......-|.+.+-|+.+++ ...|+|-|.-.....+..+.
T Consensus 12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~Ta~~~~YA~~il~ 89 (181)
T d1ta0a_ 12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred CCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHH--CEEEEEECCCCHHHHHHHHH
T ss_conf 6898189996899778542678877664100001210133478639889999999986--00899983871778999999
Q ss_pred CC
Q ss_conf 02
Q 002468 640 EY 641 (918)
Q Consensus 640 ~~ 641 (918)
.+
T Consensus 90 ~l 91 (181)
T d1ta0a_ 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
T ss_conf 86
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=86.99 E-value=0.64 Score=20.78 Aligned_cols=148 Identities=10% Similarity=0.083 Sum_probs=102.3
Q ss_pred CCEEEEEEECCCCCCCHHHHHHH----HHHHHHHCCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98089997054445897899999----99978868475-58578999974999992779999999999998640346987
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 417 (918)
Q Consensus 343 ~~~iIl~VdRLd~~KGi~~~L~A----f~~ll~~~P~~-~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~ 417 (918)
+...+.++-|+...|--...+.- +.++.+ .|+. ...+++|..|....++... +++-+.+.+++..||..-...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~-~~~~~~~P~q~IFaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNKFVVPRTVMIGGKAAPGYHMA-KMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTSCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTTG
T ss_pred CHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCCCHHH-HHHHHHHHHHHHHHHCCHHHC
T ss_conf 411013100002333345667658999987653-456788874999807889763889-999999999999874181121
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHCCEEEECCCC--CCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHC-----CCCEEEE
Q ss_conf 844399957989988999999875689978997--668826999987048998439992987801210-----4873999
Q 002468 418 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 490 (918)
Q Consensus 418 ~~~pV~~l~g~v~~~el~aly~~ADV~vvtSl~--EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~l-----g~~allV 490 (918)
+...|+|+. ..+-.---.++.+|||.+-+|++ |.-|..-+-||.- |++.+|.--|+--++ +.++..+
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred CCEEEEECC-CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC-----CCEEECCCCCHHHHHHHHCCCCCEEEE
T ss_conf 534488707-87669999751143441318999734577504589975-----983563566358999986475667981
Q ss_pred CCCCHHHHH
Q ss_conf 999999999
Q 002468 491 NPWNITEVA 499 (918)
Q Consensus 491 nP~D~~~lA 499 (918)
-. ..+++.
T Consensus 701 G~-~~~ev~ 708 (824)
T d2gj4a1 701 GM-RVEDVD 708 (824)
T ss_dssp SC-CHHHHH
T ss_pred CC-CHHHHH
T ss_conf 79-715555
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.92 E-value=0.23 Score=23.52 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 24679659999999410999809998589966599972002953991274699953981433056557957899999999
Q 002468 601 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVF 680 (918)
Q Consensus 601 ~~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~il 680 (918)
..++.|...++|+.|++ ..+-+|+|-.-...++...+..++. + | ++.+.-.... . ......++.+..+.
T Consensus 79 ~~~lvpgA~~~lk~l~~--~m~~yIvSTSY~qyi~al~~~~gfp--~-e---~~~T~~~lD~-~--~~p~ee~e~ll~i~ 147 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQE--RWTPVVISTSYTQYLRRTASMIGVR--G-E---LHGTEVDFDS-I--AVPEGLREELLSII 147 (308)
T ss_dssp HCCBCTTHHHHHHHHHT--TCEEEEEEEEEHHHHHHHHHHTTCC--S-E---EEEEBCCGGG-C--CCCHHHHHHHHHHH
T ss_pred CEEECCCHHHHHHHHHH--HCCCEEEECCHHHHHHHHHHHCCCC--C-E---EECCCCCCCC-C--CCCHHHHHHHHHHH
T ss_conf 02526888999999986--4884798535899999998535887--4-0---1002344312-4--78717799998876
Q ss_pred HHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECC-CCHHHHHHHHHH
Q ss_conf 9988049981552102127998413574665899999999973199899976999849099999699-999999999999
Q 002468 681 EYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG-VTKGAAIDRILA 759 (918)
Q Consensus 681 ~~~~~r~~Gs~iE~K~~si~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEI~p~g-vnKG~ai~~Ll~ 759 (918)
+...+ +++-+. ++..|.-|....+..+.+. |++.| -.|..+++.+++
T Consensus 148 ~~~~d---~~~eel--------~e~~d~~f~~~e~~~i~e~---------------------Vk~VGgg~k~~i~~~~~~ 195 (308)
T d1y8aa1 148 DVIAS---LSGEEL--------FRKLDELFSRSEVRKIVES---------------------VKAVGAGEKAKIMRGYCE 195 (308)
T ss_dssp HHHHH---CCHHHH--------HHHHHHHHHSHHHHHHHHT---------------------CBCCCHHHHHHHHHHHHH
T ss_pred HHCCC---CCHHHH--------HHHHHHHHCCCHHHHHHHH---------------------HCCCCCCHHHHHHHHHCC
T ss_conf 53037---537788--------9999987131157668764---------------------021478516789986336
Q ss_pred HHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 8185887899973299992599973999987485
Q 002468 760 EIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 760 ~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
..+ .++.+|+|| +.||.+||++++.
T Consensus 196 ~~~--------~~~~~~VGD-SITDve~Lr~~r~ 220 (308)
T d1y8aa1 196 SKG--------IDFPVVVGD-SISDYKMFEAARG 220 (308)
T ss_dssp HHT--------CSSCEEEEC-SGGGHHHHHHHHH
T ss_pred CCC--------CCCCEECCC-CCCCHHHHHHHHC
T ss_conf 126--------986412367-5332789999744
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=86.15 E-value=0.71 Score=20.50 Aligned_cols=43 Identities=16% Similarity=-0.037 Sum_probs=35.6
Q ss_pred EECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 96999999999999998185887899973299992599973999987485
Q 002468 744 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 744 ~p~gvnKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~~ 793 (918)
...+-.|...+..+++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 133 ~~~~~~~p~~~~~~~~~~~------~~~~~~v~VGD-s~~Di~aa~~aGi 175 (210)
T d2ah5a1 133 SPEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLGARETGI 175 (210)
T ss_dssp CSSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCHHHHHHH------CCCCCCEEECC-CHHHHHHHHHCCC
T ss_conf 3222223332110123320------12001646547-7789999998599
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=85.33 E-value=0.44 Score=21.80 Aligned_cols=37 Identities=16% Similarity=0.051 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 99999999999818588789997329999259997399998748
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~~~~~~~~~~~~d~vi~iGD~d~tDEdMF~~~~ 792 (918)
.|...++.+++.++ .+++.+++||| ..+|..+-+.++
T Consensus 138 p~~~~~~~~~~~~~------~~p~~~l~VgD-~~~Di~~A~~~G 174 (204)
T d2go7a1 138 PSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSG 174 (204)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC------CCCCEEEEEEC-CHHHHHHHHHCC
T ss_conf 25788899999829------99751899947-989999999869
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=85.06 E-value=0.8 Score=20.18 Aligned_cols=242 Identities=15% Similarity=0.128 Sum_probs=143.6
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHH--HCCEEEEECHHHHHHH
Q ss_conf 98635999889993775212799999618998199998279997455502998079999988--3878867189999999
Q 002468 206 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHF 283 (918)
Q Consensus 206 i~~~~~~~DiVwihDyhl~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~r~~ll~~ll--~aDlIgF~t~~~~~~F 283 (918)
+....+ +|+|.|+.=-.-.++..+.....+.||++ +|--..+.++.. |+.++..|-.. .+|+....+..+.+++
T Consensus 83 ~l~~~k-PD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~--~~~de~~R~~iskls~~hf~~t~~~~~~L 158 (373)
T d1v4va_ 83 ALKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 158 (373)
T ss_dssp HHHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHEE-ECCCCCCCCCCC--CCCHHHHHHHHCCCCCEEEECCHHHHHHH
T ss_conf 664037-64001113675310377889876212224-134345543356--76166666552234432551221566666
Q ss_pred HHHHHHHHCCCCCCCCEEECCEEEEEEEEE-CCCCHHHHHHHHCCCCHHHHHHHHHH----HHCCCEEEEEEECCCCCCC
Q ss_conf 999998836546899333179155899950-77692433033049814999999999----8369808999705444589
Q 002468 284 VSACTRILGFEGTPEGVEDQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQE----TFAGRKVMLGVDRLDMIKG 358 (918)
Q Consensus 284 l~~~~r~lg~~~~~~~i~~~g~~~~v~v~P-~GID~~~f~~~~~~~~~~~~~~~lr~----~~~~~~iIl~VdRLd~~KG 358 (918)
++ .|.+ ..+|.++. .++|. +... ..+.+ ...+..+++..-|....+.
T Consensus 159 ~~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~ 210 (373)
T d1v4va_ 159 LK-----EGKR-----------EEGILVTGQTGVDA--VLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPL 210 (373)
T ss_dssp HT-----TTCC-----------GGGEEECCCHHHHH--HHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGG
T ss_pred HH-----HCCC-----------CCCEEECCCCHHHH--HHHH----------HHHCCCCCCCCCCCCEEEEECCCCCCCH
T ss_conf 66-----3045-----------42134426621557--7765----------4311000223445531688426555312
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 78999999997886847558578999974999992779999999999998640346987844399957989988999999
Q 002468 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438 (918)
Q Consensus 359 i~~~L~Af~~ll~~~P~~~~kv~Lvqi~~psr~~~~~y~~l~~~i~~lv~~IN~~~g~~~~~pV~~l~g~v~~~el~aly 438 (918)
....+.++..+.+..++. .++... +. . +. ....+.+... . ...+. +...+++.+...++
T Consensus 211 ~~~~~~~~~~~~~~~~~~----~~i~p~-~~--~-~~---~~~~~~~~~~----~-----~~n~~-~~~~l~~~~~l~ll 269 (373)
T d1v4va_ 211 LSDLAQALKRVAEAFPHL----TFVYPV-HL--N-PV---VREAVFPVLK----G-----VRNFV-LLDPLEYGSMAALM 269 (373)
T ss_dssp HHHHHHHHHHHHHHCTTS----EEEEEC-CS--C-HH---HHHHHHHHHT----T-----CTTEE-EECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCC----EEEEEE-CC--C-CC---CHHHHHHHHC----C-----CCCCE-EECCCHHHHHHHHH
T ss_conf 789999999986533565----035640-34--2-22---1035555430----3-----33200-11100078888876
Q ss_pred HHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH-CCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf 87568997899766882699998704899843999298780121-048739999999999999999995399
Q 002468 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 439 ~~ADV~vvtSl~EG~nLvalEamA~~~~~~g~lIlSe~aG~~e~-lg~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
+.|++++-.| +-...|+.+.+ .|+|.-...|-.+. +..+...+-+.|.+++..+|.++|..+
T Consensus 270 ~~s~~vignS-----ssgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 270 RASLLLVTDS-----GGLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp HTEEEEEESC-----HHHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred HHCEEEECCC-----CHHHHCCHHHC----CCEEEECCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHCCH
T ss_conf 4301685064-----12222003205----868984887669878962904975899999999999997198
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=81.33 E-value=0.38 Score=22.21 Aligned_cols=41 Identities=20% Similarity=0.184 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 467965999999941099980999858996659997200295
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 643 (918)
.+|.+++.++|..|.+ .|.+++|+||++.......+..+++
T Consensus 214 i~p~~~v~~~l~~lk~-aGi~v~i~Tg~~~~~a~~il~~lgl 254 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKG-AGFELGIATGRPYTETVVPFENLGL 254 (380)
T ss_dssp SSCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf 3343639999999998-7995999889979999999998199
|