Citrus Sinensis ID: 002542

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910
MMTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ
ccccHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEccccccccccccHHEEEEcccccccccEEEEEHHHHHHHHHcccccEEEEEcHHHHHHHHHHHcHHHHHHHHHHHHcccEEEEccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHcccccEEEEEcccHHHHHHHcccccEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHcccccccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEccccEEEEcccccEEEEEEccccccccccEEEEEEEEccccccccccEEEEEccccccccEEEEEEEEcccccccccccccEEEEccccccEEEccccEEEEEEccccccEEEEEcccccEEEEEEEEEEEEcccccccccccccccEEEcccccccccccccEEEEEEEcccEEEEEEEEcEEEEEEEEEEcccccEEEEEEEccEEcccccccEEEEEEEEccccccEEEEEccccccccccccccccccccccccccccEEccccEEEEEEccEEEEEEcccccccccccccEEEEEEcccccccccccHHHHcccccccccccccEEEEEEEEEEEccccccHHHHcHHHHHHccccEEEEEccccccccccccccccccccccccccccEEEccc
ccHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccEEEEEEccccccccEHEHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHccHHHHHHHHHHHHcccEEEcccccccEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccEEEEEcccccccccHHHHccccccccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHccHcccccccccEEEccccccEEEEEEccccccccEEEEEEccccEEEEEcccccEEEEEEEEccHHHHHHHHccEEccccccccccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccEEEEccEEEEEEEcccccEEEEEEccccEEEEEEEEEEEEEEcccccccccccccEEEEccccccccccccccEEEEEEccHHHHHHHHccHHHHEEEEEcccccEEEEEEEEccEEcccccccEEEEEEEEEcccccEEEEccccHHHHHHHHcccccccccccccHHHHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEEEEEEEcccccccccccEcccccEEccccEEEEEcEEEEEEcccccHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccEEEEEcc
MMTLKGLLLYYVIAFIAITSCVQAKYRVYntsqgivpgkLNVHLVAHthddvgwlktVDQYyvgsnnsiqgaCVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVgsgqlefinggmcmhdEAVTHYIDMidqttlghrfiknefgvtprigwqidpfghSAVQAYLLGsevgfdsffygridyqdrakrkneKSLEVVWQGSrslgssaqifagafpenyepppggfyfevndkypiiqdniklfdynVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDgrvnalystpsiytdakyasneswplktddffpyadrahaywtgyfssrpaLKRYVKVMSGYYLAARQLEFYigrsetghntDSLADALAIAQhhdavtgtekQHVANDYAKRLAIGYTEAEEVVATALACLvdspsdngcgrsttrfqqcpllnisycpaseidfsngkNLVIVIYNslgwkrediiripvangdvtvfnsegkiiesqlvppadafmdLRDYYVRAYlgrnpmvppkywlafpvsvpplgfstytissvkrggghsirssiqtfessdkstveVGQGNLKLifssdkskpinyinNKSLVEESVEQSysfypayngtndkapqnagayifrpngtffiksegqvpltvmrgpiLDEVHQKINEWIYQVTRLYKGKEHVEVEfivgpipvddglgKEVVTHITSTletnktfytdsngrDFIKRIRDYrtdwdlevnepvagnyypinlgIYMQDVKKEFSLLVDralggssivdGEVELMLHRRLLLDDSRGVAEALnetdcvldeckgltiqgkyyfridtigdgakwrrtfgqeiysppllafteedgdswrnshvttfsgidssyslpdnvaIITLQ
MMTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDrakrkneksLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQanitrtnhimWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPAseidfsngkNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGkiiesqlvppadafMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIqtfessdkstvEVGQGNLKLifssdkskpinYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVgpipvddglGKEVVTHItstletnktfytdsngrdfiKRIRDYrtdwdlevnepVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALnetdcvldeckgltiqgkyyfRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTtfsgidssyslpdnvAIITLQ
MMTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYteaeevvataLACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ
***LKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR********LEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVK***************************NLKLIF*******INYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAII***
*****GL*LYYVIAFIAITSCVQAKYRV*N***GIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCP********GKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTI*******************SSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYF*******************YSPPLLAF******************IDSSYSLPDNVAIITLQ
MMTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR**********VVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQ***********VGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ
*MTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKR*****************KSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDG*********TFSGIDSSYSLPDNVAIITLQ
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query910 2.2.26 [Sep-21-2011]
Q8VHC8 1007 Lysosomal alpha-mannosida yes no 0.921 0.833 0.414 0.0
O09159 1013 Lysosomal alpha-mannosida yes no 0.937 0.842 0.407 0.0
Q60HE9 1012 Lysosomal alpha-mannosida N/A no 0.920 0.828 0.411 0.0
O00754 1011 Lysosomal alpha-mannosida yes no 0.920 0.828 0.408 0.0
O46432 1007 Lysosomal alpha-mannosida N/A no 0.916 0.828 0.408 0.0
P34098 1010 Lysosomal alpha-mannosida yes no 0.952 0.858 0.393 0.0
Q29451 999 Lysosomal alpha-mannosida yes no 0.918 0.836 0.402 0.0
Q8BRK91152 Alpha-mannosidase 2x OS=M no no 0.819 0.647 0.277 6e-81
P496411150 Alpha-mannosidase 2x OS=H no no 0.818 0.647 0.281 2e-79
P270461150 Alpha-mannosidase 2 OS=Mu no no 0.803 0.635 0.279 3e-78
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/905 (41%), Positives = 517/905 (57%), Gaps = 66/905 (7%)

Query: 24  AKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIP 83
           A+   Y T   + PG LNVHLVAHTHDDVGWLKTVDQYY G +N +Q A VQ +LDSVI 
Sbjct: 45  ARAAGYETCPMVQPGMLNVHLVAHTHDDVGWLKTVDQYYWGIHNDLQQAGVQYILDSVIS 104

Query: 84  ELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYI 143
            LLA+  R+F+YVE AFF RWW +Q+   Q  V++LV  G+LEF NGG  M+DEA THY 
Sbjct: 105 ALLAEPTRRFVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHYG 164

Query: 144 DMIDQTTLGHRFIKNEFGV--TPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQD 201
            ++DQ TLG RF+++ FG    PR+ W IDPFGHS  QA L  +++GFD  F+GRIDYQD
Sbjct: 165 AIVDQMTLGLRFLEDTFGSDGRPRVAWHIDPFGHSREQASLF-AQMGFDGVFFGRIDYQD 223

Query: 202 RAKRKNEKSLEVVWQGSRSLGS-SAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKL 260
           +  RK  + +E+VW+ S SL + +A +F G  P NY PP G   ++V    P + D+ + 
Sbjct: 224 KLVRKKRREMELVWRASASLKAPAADLFTGVLPNNYGPPEG-LCWDVLCADPPVVDDPRS 282

Query: 261 FDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMD-- 318
            +YN +  V+ F+  A +Q    RTNH + TMG+DF+Y+ A TWF+ LDK I  VNM   
Sbjct: 283 PEYNAKKLVSYFLQLATAQGRYYRTNHTVMTMGSDFQYENANTWFKNLDKLIQLVNMQQA 342

Query: 319 --GRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKV 376
              RV+ LYSTP+ Y      +N +WP+K DDFFPYAD  H +WTGYFSSRPALKRY ++
Sbjct: 343 NGSRVHVLYSTPACYLWELNKANLTWPVKEDDFFPYADGPHMFWTGYFSSRPALKRYERL 402

Query: 377 MSGYYLAARQLEFYIGRSET----GHNTDS-LADALAIAQHHDAVTGTEKQHVANDYAKR 431
              +     QLE  +G +      GH   S L  A+A+ QHHDAV+GT KQHVA+DYA++
Sbjct: 403 SYNFLQVCNQLEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQ 462

Query: 432 LAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLV 491
           LA G+   E +++ ALA L  S            F  C  LNIS CP S+      +   
Sbjct: 463 LAAGWGPCEVLLSNALAKLSGSKET---------FLFCRDLNISICPFSQ----TSERFQ 509

Query: 492 IVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRN 551
           +++YN LG K + ++R+PV  G   + +     + S +V    +               N
Sbjct: 510 VLVYNPLGRKVDRMVRLPVRKGLFLIKDPGNNTVPSTVVELTSS--------------GN 555

Query: 552 PMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKL 611
           P       L FP  VP LGFS Y+++ V      + RS     +      + +    L+ 
Sbjct: 556 PE------LLFPALVPALGFSVYSVTRVSDQNPQT-RSQHSRPQKYSSPVLSIKNEYLRA 608

Query: 612 IFSSDKS--KPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIK 669
            F  D      I  ++ K  +   V Q++ +Y A  G + ++ Q +GAYIFRP+  +   
Sbjct: 609 SFHPDTGLLSMIEVLDRK--LTLPVNQAFFWYNASVG-DKRSSQASGAYIFRPSQQWPFP 665

Query: 670 SEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVT 729
                   +++  ++ EVHQ    W  QV RLY G+ H+E+E+ VGPIPV D  GKE+++
Sbjct: 666 VSHLARTRLVKTALVQEVHQNFTAWCSQVVRLYSGQRHLELEWTVGPIPVGDKWGKEIIS 725

Query: 730 HITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEF 789
              + LET   F+TDSNGR+ ++R RDYR  W L   EPVAGNYYP+N  IY+ D K + 
Sbjct: 726 RFDTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQL 785

Query: 790 SLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFR 849
           ++L DR+ GGSS+ DG +ELM+HRRLL DD RGV EAL E         G  ++G++   
Sbjct: 786 TVLTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQEPG------SGGWVRGRHLLL 839

Query: 850 IDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSH-----VTTFSGIDSSYSLPDNV 904
           +DT  + A   R   ++    P L      G S+ + H        FSG+     LP +V
Sbjct: 840 LDTAREAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGLRR--QLPPSV 897

Query: 905 AIITL 909
            ++TL
Sbjct: 898 RLLTL 902
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.
Cavia porcellus (taxid: 10141)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2 Back     alignment and function description
>sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3 Back     alignment and function description
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query910
2241314001009 predicted protein [Populus trichocarpa] 0.963 0.869 0.789 0.0
440546588 1024 alpha-mannosidase [Prunus persica] 0.986 0.876 0.779 0.0
356561171 1030 PREDICTED: lysosomal alpha-mannosidase-l 0.974 0.861 0.781 0.0
449452024 1020 PREDICTED: lysosomal alpha-mannosidase-l 0.991 0.884 0.766 0.0
357508425 1082 Lysosomal alpha-mannosidase [Medicago tr 0.983 0.827 0.745 0.0
359488553 1025 PREDICTED: lysosomal alpha-mannosidase-l 0.989 0.878 0.758 0.0
255543555977 lysosomal alpha-mannosidase, putative [R 0.949 0.884 0.757 0.0
255540059 1012 lysosomal alpha-mannosidase, putative [R 0.994 0.894 0.715 0.0
356508869 1011 PREDICTED: lysosomal alpha-mannosidase-l 0.986 0.888 0.731 0.0
356561173986 PREDICTED: lysosomal alpha-mannosidase-l 0.926 0.854 0.745 0.0
>gi|224131400|ref|XP_002321075.1| predicted protein [Populus trichocarpa] gi|222861848|gb|EEE99390.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1500 bits (3884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/891 (78%), Positives = 796/891 (89%), Gaps = 14/891 (1%)

Query: 21  CVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS 80
            V+AKY VYNTSQGIV  K+NVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS
Sbjct: 20  VVEAKYMVYNTSQGIVKDKINVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS 79

Query: 81  VIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVT 140
           +IP LLADKNRKFIY   AFFQRWW +QSE MQH VKQLV SGQLEFINGGMCMHDEAVT
Sbjct: 80  LIPALLADKNRKFIY---AFFQRWWRDQSETMQHVVKQLVSSGQLEFINGGMCMHDEAVT 136

Query: 141 HYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQ 200
           HYIDMIDQTTLGHRFIK +FGVTPR+GWQIDPFGHSAVQAY+LG+E+GFDS F+GRIDYQ
Sbjct: 137 HYIDMIDQTTLGHRFIKKDFGVTPRVGWQIDPFGHSAVQAYMLGAEIGFDSLFFGRIDYQ 196

Query: 201 DRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKL 260
           DRAKRKNEKSLEVVWQ S+S GSSAQIFAGAFPE+YEPPPGGFYFEVND  P++QD+I L
Sbjct: 197 DRAKRKNEKSLEVVWQASKSFGSSAQIFAGAFPEHYEPPPGGFYFEVNDPSPVVQDDINL 256

Query: 261 FDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGR 320
           FDYNVQ+RV+DFVAAA+SQANITRTNHIMWTMGTDFKYQYA +WFRQ+DK IHYVNMDGR
Sbjct: 257 FDYNVQERVDDFVAAAVSQANITRTNHIMWTMGTDFKYQYAHSWFRQMDKLIHYVNMDGR 316

Query: 321 VNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGY 380
           VNALYSTPSIYTDAK+A+NE WP+KT DFFPYADRA+ YWTGYF+SRPALKRYV++MSGY
Sbjct: 317 VNALYSTPSIYTDAKHATNEHWPVKTGDFFPYADRANGYWTGYFASRPALKRYVRMMSGY 376

Query: 381 YLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAE 440
           YLAARQLEFY GRS  G NTDSLAD+LAIAQHHDAVTGTEKQHVANDYAKRL+IGYTEAE
Sbjct: 377 YLAARQLEFYNGRSNRGPNTDSLADSLAIAQHHDAVTGTEKQHVANDYAKRLSIGYTEAE 436

Query: 441 EVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGW 500
           ++VA++LACLV+S S  GC RSTT+FQQ           +++D S G+NL++V+YN+LGW
Sbjct: 437 KLVASSLACLVESASHTGCQRSTTKFQQA---------KTQVDLSQGRNLIVVVYNALGW 487

Query: 501 KREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWL 560
            R+D+I+ PV N +V V +SE + I SQ++P ADAF+ LR+ +V AYLGR+P+  PKYWL
Sbjct: 488 ARDDVIQFPVFNENVIVHDSEKREIVSQIIPIADAFVGLRNSHVNAYLGRSPVGTPKYWL 547

Query: 561 AFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKP 620
           AFPVSVPP GFSTY+ISS KR G HS +SS+ T   S+KS VEVGQGNLKL FS+DK K 
Sbjct: 548 AFPVSVPPFGFSTYSISSAKRAGAHSSKSSVYTLR-SEKSAVEVGQGNLKLTFSADKIKH 606

Query: 621 INYINNKSLVEESVEQSYSFYPAYNGT-NDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVM 679
            NY+N++S V+ESVEQ++SFY  YNGT NDK PQN+GAYIFRPNGTF I  E QVPLTVM
Sbjct: 607 ANYVNSRSSVKESVEQTFSFYAGYNGTGNDKDPQNSGAYIFRPNGTFPINPESQVPLTVM 666

Query: 680 RGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNK 739
           RGP+LDEVHQ++++WIYQ+TRLYKG+EHVEVEFIVGPIP++DG+GKEV T IT+T+ETNK
Sbjct: 667 RGPVLDEVHQQVSQWIYQITRLYKGREHVEVEFIVGPIPIEDGIGKEVATQITTTMETNK 726

Query: 740 TFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGG 799
           TFYTDSNGRDFIKRIRDYR DWDLEVN+P AGNYYPINLGIY QD KKEFS+LVDRALGG
Sbjct: 727 TFYTDSNGRDFIKRIRDYRADWDLEVNQPFAGNYYPINLGIYFQDDKKEFSVLVDRALGG 786

Query: 800 SSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKW 859
           SS+VDG++ELMLHRRLLLDDSRGVAEALNET CVLD+CKGLTIQGKYY+RID IG+GAKW
Sbjct: 787 SSLVDGQIELMLHRRLLLDDSRGVAEALNETVCVLDQCKGLTIQGKYYYRIDPIGEGAKW 846

Query: 860 RRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ 910
           RR+FGQEIYSP LLAF+EEDGD+W NSHVTTFSG DSSY LPDNVA++TLQ
Sbjct: 847 RRSFGQEIYSPLLLAFSEEDGDNWMNSHVTTFSGFDSSYILPDNVAVLTLQ 897

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] Back     alignment and taxonomy information
>gi|356561171|ref|XP_003548858.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449452024|ref|XP_004143760.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357508425|ref|XP_003624501.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355499516|gb|AES80719.1| Lysosomal alpha-mannosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255543555|ref|XP_002512840.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223547851|gb|EEF49343.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356508869|ref|XP_003523176.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356561173|ref|XP_003548859.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 2 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query910
TAIR|locus:2159143 1024 AT5G13980 [Arabidopsis thalian 0.983 0.874 0.705 0.0
TAIR|locus:2090817 1019 AT3G26720 [Arabidopsis thalian 0.991 0.885 0.653 0.0
TAIR|locus:2156857 1047 AT5G66150 [Arabidopsis thalian 0.994 0.864 0.561 5.2e-287
ZFIN|ZDB-GENE-050327-52982 man2b1 "mannosidase, alpha, cl 0.578 0.535 0.454 1.3e-180
MGI|MGI:1072861013 Man2b1 "mannosidase 2, alpha B 0.535 0.480 0.453 1.4e-172
RGD|30391009 Man2b1 "mannosidase, alpha, cl 0.541 0.488 0.45 2.3e-172
UNIPROTKB|F1PKB21007 MAN2B1 "Uncharacterized protei 0.554 0.501 0.447 2.9e-172
UNIPROTKB|G5E9281010 MAN2B1 "Mannosidase, alpha, cl 0.556 0.500 0.443 2e-171
UNIPROTKB|O007541011 MAN2B1 "Lysosomal alpha-mannos 0.556 0.500 0.442 6.9e-171
UNIPROTKB|F1SEY11008 MAN2B1 "Uncharacterized protei 0.545 0.492 0.451 1.9e-168
TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3464 (1224.4 bits), Expect = 0., P = 0.
 Identities = 639/906 (70%), Positives = 760/906 (83%)

Query:     9 LYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNS 68
             L +++  + I S V+++Y VYNTS  IVPGKLNVH+V H+HDDVGWLKTVDQYYVGSNNS
Sbjct:     7 LCWIVLLLGI-SLVESRYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYVGSNNS 65

Query:    69 IQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFI 128
             IQ ACVQNVLDS++P LLADKNRKFIYVEQAFFQRWW+EQSE ++  VK+L+ SGQLE I
Sbjct:    66 IQVACVQNVLDSIVPALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSGQLELI 125

Query:   129 NGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVG 188
             NGGMCMHDEA  HYIDMIDQTTLGHRFI  EF VTPRIGWQIDPFGHSAVQAYLLG+EVG
Sbjct:   126 NGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLLGAEVG 185

Query:   189 FDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVN 248
             FDS F+GRIDYQDR KR  EK+LEV+W+GS+SLGSS+QIFAGAFP NYEPPPGGFY+E+ 
Sbjct:   186 FDSVFFGRIDYQDREKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGFYYEIT 245

Query:   249 DKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQL 308
             D  P++QD+  LFDYNVQ+RVN FVAAA+ QANITR NHIM+TMGTDF+YQYA TW+RQ+
Sbjct:   246 DDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHTWYRQM 305

Query:   309 DKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRP 368
             DK IHYVN+DGRVNA YSTPSIYTDAK+A+NE+WPLKT+D+FPYADR +AYWTGYF+SRP
Sbjct:   306 DKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGYFTSRP 365

Query:   369 ALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDY 428
             ALKRYV+VMS YYLAARQLEF+ GRS+ G NTDSLADALAIAQHHDAV+GT KQHVANDY
Sbjct:   366 ALKRYVRVMSAYYLAARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQHVANDY 425

Query:   429 AKRLAIGYXXXXXXXXXXLACLVD-SPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNG 487
             AKRLAIGY          LA L    P+ N        FQQC LLNISYCP+SE++ S+G
Sbjct:   426 AKRLAIGYVEAESVVATSLAHLTKVDPTLN------PTFQQCLLLNISYCPSSEVNLSDG 479

Query:   488 KNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAY 547
             K+L+++ YN LGWKR DI+R+PV  GDV+V +SEG  +ESQLVP  D ++ LR Y+V AY
Sbjct:   480 KSLIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAY 539

Query:   548 LGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQG 607
             LG++P   PKYWL F V+VPPLGF+TYTIS+ K+  G+S +S +      ++S + +G G
Sbjct:   540 LGQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHG 599

Query:   608 NLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAP---QNAGAYIFRPNG 664
             +LKL FS+D+   INY+N ++ + E V+Q++S+Y AYNG+NDK P   QN+GAY+FRPNG
Sbjct:   600 HLKLSFSTDQGTAINYVNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNG 659

Query:   665 TFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLG 724
             TF I  EGQVPLTV+ GP++DEVHQ+IN WI Q+TR+YKGKEHVEVEFIVG IP+DDG+G
Sbjct:   660 TFPINPEGQVPLTVIHGPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIG 719

Query:   725 KEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQD 784
             KEVVT I+S+L++NKTFYTDS+GRD+IKRIRDYR+DW L+VN+P+AGNYYPIN GIY+QD
Sbjct:   720 KEVVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQD 779

Query:   785 VKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQG 844
              KKEFS++VDRA GGSSIVDG+VELMLHRRLLLDDSRGVAE LNET CV D+C GLTIQG
Sbjct:   780 SKKEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQG 839

Query:   845 KYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNV 904
             KYY+RID  G+GAKWRRTFGQEIYSP LLAF ++D     +    +FSGID SYSLPDNV
Sbjct:   840 KYYYRIDPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNV 899

Query:   905 AIITLQ 910
             A++TLQ
Sbjct:   900 ALLTLQ 905
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0015923 "mannosidase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O00754MA2B1_HUMAN3, ., 2, ., 1, ., 2, 40.40800.92080.8288yesno
Q8VHC8MA2B1_CAVPO3, ., 2, ., 1, ., 2, 40.41430.92190.8331yesno
P34098MANA_DICDI3, ., 2, ., 1, ., 2, 40.39320.95270.8584yesno
Q29451MA2B1_BOVIN3, ., 2, ., 1, ., 2, 40.40280.91860.8368yesno
O09159MA2B1_MOUSE3, ., 2, ., 1, ., 2, 40.40720.93730.8420yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00140904
hypothetical protein (1009 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query910
cd10810278 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic 1e-178
cd00451258 cd00451, GH38N_AMII_euk, N-terminal catalytic doma 1e-105
PLN02701 1050 PLN02701, PLN02701, alpha-mannosidase 1e-102
pfam01074269 pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam 7e-93
cd10809340 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal 1e-70
cd10811326 cd10811, GH38N_AMII_Epman_like, N-terminal catalyt 2e-59
cd11666344 cd11666, GH38N_Man2A1, N-terminal catalytic domain 1e-56
cd11667344 cd11667, GH38N_Man2A2, N-terminal catalytic domain 2e-55
cd10786251 cd10786, GH38N_AMII_like, N-terminal catalytic dom 2e-49
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 6e-36
smart0087279 smart00872, Alpha-mann_mid, Alpha mannosidase, mid 1e-21
pfam0926182 pfam09261, Alpha-mann_mid, Alpha mannosidase, midd 2e-20
cd10789252 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal 2e-11
cd10812258 cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly 0.001
cd10813252 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic d 0.001
cd10791254 cd10791, GH38N_AMII_like_1, N-terminal catalytic d 0.002
>gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information 
 Score =  516 bits (1332), Expect = e-178
 Identities = 175/280 (62%), Positives = 204/280 (72%), Gaps = 4/280 (1%)

Query: 40  LNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQA 99
           LNVHLV HTHDDVGWLKTVDQYY GSNNSIQ A VQ +LDSVI ELL + +RKFIYVE A
Sbjct: 1   LNVHLVPHTHDDVGWLKTVDQYYYGSNNSIQHAGVQYILDSVIEELLKNPDRKFIYVEIA 60

Query: 100 FFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNE 159
           FF RWW EQSE  + +VK+LV +GQLEFINGG CM+DEA THY D+IDQ TLGH+F+K+ 
Sbjct: 61  FFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDT 120

Query: 160 FGV--TPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQG 217
           FG    PR+GWQIDPFGHS  QA L     GFD  F+GRIDYQD+A+R   K +E +W+G
Sbjct: 121 FGECARPRVGWQIDPFGHSRTQASLFAQM-GFDGLFFGRIDYQDKAQRLKNKEMEFIWRG 179

Query: 218 SRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAI 277
           S SLG  A IF G    +Y PPP GF F++      IQD+  L DYNV +RV+DFV  A 
Sbjct: 180 SPSLGPDADIFTGVLYNHYGPPP-GFCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAK 238

Query: 278 SQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNM 317
            QA   RTNHIM TMG+DF+YQ A  WF+ +DK I YVN 
Sbjct: 239 EQAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278

The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278
>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain Back     alignment and domain information
>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information
>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212124 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212103 cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 910
KOG1959 996 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PLN02701 1050 alpha-mannosidase 100.0
KOG19581129 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PRK09819875 alpha-mannosidase; Provisional 100.0
KOG43421078 consensus Alpha-mannosidase [Carbohydrate transpor 100.0
PF01074275 Glyco_hydro_38: Glycosyl hydrolases family 38 N-te 100.0
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 100.0
PF07748457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 100.0
PF0926180 Alpha-mann_mid: Alpha mannosidase, middle domain; 99.83
smart0087279 Alpha-mann_mid Alpha mannosidase, middle domain. M 99.8
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 99.78
PF03065360 Glyco_hydro_57: Glycosyl hydrolase family 57; Inte 98.5
COG1543504 Uncharacterized conserved protein [Function unknow 96.45
COG1449615 Alpha-amylase/alpha-mannosidase [Carbohydrate tran 95.64
PF01522123 Polysacc_deac_1: Polysaccharide deacetylase; Inter 95.5
TIGR03212297 uraD_N-term-dom putative urate catabolism protein. 93.94
TIGR02764191 spore_ybaN_pdaB polysaccharide deacetylase family 93.09
TIGR02884224 spore_pdaA delta-lactam-biosynthetic de-N-acetylas 92.91
TIGR03006265 pepcterm_polyde polysaccharide deactylase family p 91.03
TIGR02873268 spore_ylxY probable sporulation protein, polysacch 89.94
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 85.63
PRK14581672 hmsF outer membrane N-deacetylase; Provisional 82.57
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-217  Score=1804.24  Aligned_cols=874  Identities=52%  Similarity=0.876  Sum_probs=794.8

Q ss_pred             cchhhHHHHHHHHHHHHhccccceeeEecCCCCCCCCceEEEEEeccCCCCccchhhhheeecCCCcchhHHHHHHHHHH
Q 002542            2 MTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSV   81 (910)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VhlVpHSH~D~gWl~t~~~y~~~~~~~~~~~~v~~il~~v   81 (910)
                      |.|..++|+.+++++++..  ...++.|++|+...+++++||||||||+|+|||||+||||+|++|.||+++|++|||+|
T Consensus         1 ~~l~~~~~~l~~l~lli~~--~~~~~~y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSV   78 (996)
T KOG1959|consen    1 MALNKFLLFLCLLLLLISL--VESRAGYNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSV   78 (996)
T ss_pred             CCcccchHHHHHHHHHHHH--HhHhhccCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHH
Confidence            5566666665544443322  22445599999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCeEEEechhHHHHHHHhcCHHHHHHHHHHHhCCcEEEEcceeeeecccCCChHHHHHHHHHHHHHHHHHhC
Q 002542           82 IPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFG  161 (910)
Q Consensus        82 i~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~esiIrql~~G~~~l~~~fG  161 (910)
                      |++|.+||+|||+++|++||.+||.+|+++.|+.||+||++||||||||||||+|||++||.|+|+||++||+||.++||
T Consensus        79 V~eLl~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG  158 (996)
T KOG1959|consen   79 VEELLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFG  158 (996)
T ss_pred             HHHHhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             --CCCceeeecCCCCCChhhHHHHhhhcCCcEEEEeccchhhHhhhccCCceeEEEecCCCCCCCCeeEEeeCCCCCCCC
Q 002542          162 --VTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPP  239 (910)
Q Consensus       162 --~~p~~~w~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~~~~~~~~~~~eF~W~g~d~~~~gs~i~t~~~~~~Y~~p  239 (910)
                        .+|++||||||||||+.+|+|| |+|||+++||+||||+||+.|..++.|||+|+|++++|+.++|||++|++||++|
T Consensus       159 ~cgrPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P  237 (996)
T KOG1959|consen  159 ECGRPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP  237 (996)
T ss_pred             ccCCcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC
Confidence              8999999999999999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCCCCccccCcccccccHHHHHHHHHHHHHHhhcccCCCeEEEeecCCCcccchHHHHHHHHHHHHHHhcC-
Q 002542          240 PGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMD-  318 (910)
Q Consensus       240 ~~~f~f~~~~~~~~~~d~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~f~~~~~li~~~N~~-  318 (910)
                       +|||||.+|.+.|++|++.+.+|||++|++.|+++++.++.+|+|||||+|||+||+|.+|..||+||||||+|+|+. 
T Consensus       238 -~gfc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~q  316 (996)
T KOG1959|consen  238 -PGFCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQ  316 (996)
T ss_pred             -CCceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhh
Confidence             999999999999999999999999999999999999999999999999999999999999999999999999999953 


Q ss_pred             --C-CeEEEEcChhhHHHHHHhcCCCCCCcCCCCccccccCCCccceeeecchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 002542          319 --G-RVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSE  395 (910)
Q Consensus       319 --~-~~~i~~sT~~~Yf~al~~~~~~~p~~~gDf~py~~~~~~yWtG~yTSR~~~K~~~R~~e~~L~~ae~l~~l~~~~~  395 (910)
                        + .+++.||||+||++++++.+..||+++.|||||++++|+||||||||||.+|++.|+++.+|++|+||++++++..
T Consensus       317 a~gs~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~  396 (996)
T KOG1959|consen  317 ADGSKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSS  396 (996)
T ss_pred             cCCceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCc
Confidence              4 7999999999999999999999999999999999999999999999999999999999999999999999998654


Q ss_pred             --CCCchHHHHHHHHHhcccccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccccccc
Q 002542          396 --TGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLN  473 (910)
Q Consensus       396 --~~~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln  473 (910)
                        ..+.++.|+++|+++|||||||||+|++|.+||.++|..|+..|+++++.+|+.|....        ...|++|.+||
T Consensus       397 ~~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lN  468 (996)
T KOG1959|consen  397 TEQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLN  468 (996)
T ss_pred             cccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------Cccchhhhhhc
Confidence              56789999999999999999999999999999999999999999999999999998754        23689999999


Q ss_pred             cccCCCcccccCCCceEEEEEEcCCCceEeEEEEEEEecCcEEEEccCCcEEeEEEeCCCccccchhhhhhhhccCCCCC
Q 002542          474 ISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPM  553 (910)
Q Consensus       474 ~s~c~~~~~~l~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~  553 (910)
                      +|+||.++.   ..+.+.|++||||+|.++++|+|||..+++.|.|+.|++|++|++|.......+.          .+.
T Consensus       469 iS~C~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~  535 (996)
T KOG1959|consen  469 ISECAFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRN  535 (996)
T ss_pred             cccCCCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccc
Confidence            999999973   3578999999999999999999999999999999999999999999976433221          122


Q ss_pred             CCCcEEEEEEeecCCCceEEEEEEecCCCCCccccccceecccCCCCceEEecceEEEEEECCCCCcEEEEecCCcceEE
Q 002542          554 VPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEES  633 (910)
Q Consensus       554 ~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~  633 (910)
                      ....|+|+|.|.|||+|+++|.|+........+ .+..............|+|+++++.||.++|.++++..+.+|++..
T Consensus       536 ~~~~~eLvf~asvpplg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~  614 (996)
T KOG1959|consen  536 NDTKHELVFKASVPPLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTEN  614 (996)
T ss_pred             cCCCceEEEEEEecCccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCccee
Confidence            345689999999999999999999655432210 0111111122334489999999999998889999999888999999


Q ss_pred             eeeeEEEeecCCCCCCCCCCCCcceeEecCCCeeeecC-CcceEEEEEcccEEEEEEEEcceEEEEEEEecCCCeEEEEE
Q 002542          634 VEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSE-GQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEF  712 (910)
Q Consensus       634 ~~~~f~~Y~~~~g~~~~~~~~sGAYiF~P~~~~~~~~~-~~~~i~v~~Gpl~~~v~~~~~~~~~~~vrLy~~~~~ie~e~  712 (910)
                      +.|+|.+|.+..|++  +.+.||||+||| +..++++. ....++|+.|||+.||++.++.|++|++|||+|.+++||||
T Consensus       615 V~Q~f~~Y~~~~g~n--~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew  691 (996)
T KOG1959|consen  615 VDQEFGYYKGYRGDN--DKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEW  691 (996)
T ss_pred             eeeeeEEEEeecCCc--CCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEE
Confidence            999999999988853  359999999999 54444443 35788899999999999999999999999999999999999


Q ss_pred             EEcceeccCCCCcEEEEEEEecCCCCCeEEEccCCCceeecccccCCCccccCCCccccceEeeeeeEEEEeCCcceEEE
Q 002542          713 IVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLL  792 (910)
Q Consensus       713 ~v~~ip~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~ikR~~~~r~~w~~~~~~pv~~nyYPv~s~i~i~D~~~~ltvl  792 (910)
                      .|+|||++++.|||+++||+|+|.+++.|||||||++|+||.+++|++|..+.++||+||||||++.|||+|++.+|+||
T Consensus       692 ~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL  771 (996)
T KOG1959|consen  692 LVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVL  771 (996)
T ss_pred             EecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccccceeeccCCeEEEEEeccccCCCCcCcccccccccccccccCCeEEEeEEEEEeecCCCcc-hhcccchhhhcCCc
Q 002542          793 VDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGA-KWRRTFGQEIYSPP  871 (910)
Q Consensus       793 ~dr~~G~ssl~~G~iElmL~Rr~~~dD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~~~~~~~~~-~~~r~~~~~~~~p~  871 (910)
                      |||+|||+|++||+||||||||++.||+|||||+|||+.++   ..||++||+|++.|+...+.+ ..+|..++++..|.
T Consensus       772 ~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~  848 (996)
T KOG1959|consen  772 NDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPL  848 (996)
T ss_pred             eecccCCccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHH
Confidence            99999999999999999999999999999999999999886   379999999999999888876 77888999999999


Q ss_pred             eeeeeccCCCcccCCC-ccc--ccCCCCCCCCCccceeeccC
Q 002542          872 LLAFTEEDGDSWRNSH-VTT--FSGIDSSYSLPDNVAIITLQ  910 (910)
Q Consensus       872 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~lp~~vhlltl~  910 (910)
                      +.+|++.....|.... ...  |++   +.+||.||||||||
T Consensus       849 ~~~f~~~~~~~~~~~~s~~~~~f~~---~~~lP~~vhLlTLe  887 (996)
T KOG1959|consen  849 WKFFSKPEGGEALNSLSIPGSAFSG---SYDLPQSVHLLTLE  887 (996)
T ss_pred             HHHhhcCCCccchhhcCCCcccccc---ccCCCcceeeeecc
Confidence            9999987765554332 222  444   35899999999997

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold Back     alignment and domain information
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1543 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase Back     alignment and domain information
>TIGR03212 uraD_N-term-dom putative urate catabolism protein Back     alignment and domain information
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB Back     alignment and domain information
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase Back     alignment and domain information
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily Back     alignment and domain information
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK14581 hmsF outer membrane N-deacetylase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query910
1o7d_A298 The Structure Of The Bovine Lysosomal A-Mannosidase 1e-79
1qwn_A1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 1e-76
3dx3_A1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 1e-76
1ps3_A1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 2e-76
1hxk_A1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 2e-76
1qwu_A1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 5e-76
3cv5_A1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 1e-75
1hty_A1015 Golgi Alpha-Mannosidase Ii Length = 1015 2e-72
1o7d_D282 The Structure Of The Bovine Lysosomal A-Mannosidase 8e-52
1o7d_C159 The Structure Of The Bovine Lysosomal A-Mannosidase 3e-16
1o7d_B84 The Structure Of The Bovine Lysosomal A-Mannosidase 7e-16
>pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 Back     alignment and structure 
Iteration: 1

 Score =  294 bits (753), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 191/298 (64%), Gaps = 5/298 (1%)
Query: 29  YNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLAD 88
           Y T   + P  LNVHLV HTHDDVGWLKTVDQY+ G  N+IQ A VQ +LDSVI  LLA+
Sbjct: 3   YKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLAN 62
Query: 89  KNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQ 148
             R+FIYVE AFF RWW +Q+ A Q  V++LV  G+LEF NGG  M+DEA THY  +IDQ
Sbjct: 63  PTRRFIYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQ 122
Query: 149 TTLGHRFIKNEFGV--TPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRK 206
            TLG RF++  FG    PR+ W IDPFGHS  QA L  +++GFD FF+GR+DYQD+  RK
Sbjct: 123 MTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLF-AQMGFDGFFFGRLDYQDKKVRK 181
Query: 207 NEKSLEVVWQGSRSLG-SSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNV 265
               +E VW+ S SL   +A +F    P  Y PP G  +  +    P+++D  +  +YN 
Sbjct: 182 KTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCADKPVVEDT-RSPEYNA 240
Query: 266 QDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNA 323
           ++ V  F+  A  Q  + RT H + TMG+DF+Y+ A TWF+ LDK I  VN   R N 
Sbjct: 241 KELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRANG 298
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure
>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 Back     alignment and structure
>pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 Back     alignment and structure
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query910
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 0.0
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-115
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 1e-101
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 8e-97
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 5e-96
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 2e-44
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 2e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1k1x_A659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 5e-05
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  701 bits (1809), Expect = 0.0
 Identities = 229/942 (24%), Positives = 390/942 (41%), Gaps = 96/942 (10%)

Query: 23  QAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVI 82
           Q     Y+  +     KL V +V H+H+D GW++T ++YY            +++L + +
Sbjct: 64  QGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNAL 115

Query: 83  PELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHY 142
             L  +   KFI+ E ++F R++ +  E  + ++K +V +GQLEF+ GG  M DEA +H+
Sbjct: 116 RHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHW 175

Query: 143 IDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR 202
            +++ Q T G  ++K    VTP   W I PFGHS    Y+L  + GF +    R  Y  +
Sbjct: 176 RNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVK 234

Query: 203 AKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPG----------GFYFEVNDK-- 250
            +   ++ LE +W+          +F    P      P            F F+      
Sbjct: 235 KELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFG 294

Query: 251 --YPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQ- 307
              P       + D NV  R +  V     +A + RTN ++  +G DF+++    W  Q 
Sbjct: 295 LSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQR 354

Query: 308 --LDKFIHYVNMDGR--VNALYSTPSIYTDA----KYASNESWPLKTDDFFPYADRAHAY 359
              ++   ++N      V A + T   Y DA    + A    +P  + DFF YADR+  Y
Sbjct: 355 VNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNY 414

Query: 360 WTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADA---LAIAQHHDAV 416
           W+GY++SRP  KR  +V+  Y  AA  L  +          + L  A   L++ QHHD +
Sbjct: 415 WSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGI 474

Query: 417 TGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISY 476
           TGT K HV  DY +R+       + V+  ++  L+  PS      S         L+ S 
Sbjct: 475 TGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSF----SYFTLDDSR 530

Query: 477 CPASEIDFSN---------GKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIES 527
            P S ++ S            +  +V++N+L   RE ++   V++  V+V +     +E+
Sbjct: 531 WPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEA 590

Query: 528 QLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSI 587
           Q+ P      D     +            KY + F   VPP+G +TY ++       H+ 
Sbjct: 591 QVSPVWSWHHDTLTKTIHPQGS-----TTKYRIIFKARVPPMGLATYVLTISDSKPEHTS 645

Query: 588 RSSIQTFES----------------SDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVE 631
            +S                       D   + +  GN   +  S++    +    +    
Sbjct: 646 YASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPH 705

Query: 632 ESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKI 691
             V   +  Y   +         +GAY+F PNG       GQ  + V +G +   V   +
Sbjct: 706 VPVHFKFLKYGVRSHG-----DRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL 760

Query: 692 NEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFI 751
              ++Q   +  G   +     +G +        E+V  + + +++   FYTD NG  FI
Sbjct: 761 PSVVHQT-IMRGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLNGLQFI 814

Query: 752 KRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELML 811
           KR R  +         P+  NYYPI  G++++D     +LL  + LGGSS+  GE+E+M 
Sbjct: 815 KRRRLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQ 866

Query: 812 HRRLLLDDSRGVAEALNETDCVLDECKGL---TIQGKYYFRIDTIGDGAKWRRTFGQEIY 868
            RRL  DD RG+ + + +   VL   + +           ++   G          Q + 
Sbjct: 867 DRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLL 926

Query: 869 SPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQ 910
            P       E  + W  +    F G     S  +++ +  ++
Sbjct: 927 DPLDKFIFAE--NEWIGAQ-GQFGGDHP--SAREDLDVSVMR 963
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 910
g1o7d.3330 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno 1e-112
g1o7d.2 490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 1e-109
d3bvua3381 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru 1e-106
d3bvua2522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 1e-104
d1k1xa3310 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te 1e-36
g1o7d.195 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann 1e-25
d3bvua1111 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr 1e-24
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 Back     information, alignment and structure
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query910
d3bvua3381 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.3330 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua2522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.2 490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d1k1xa3310 4-alpha-glucanotransferase, N-terminal domain {Arc 100.0
d3bvua1111 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.94
g1o7d.195 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.92
d2b5dx2404 Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 98.95
d1ufaa2412 Hypothetical protein TT1467, N-terminal domain {Th 98.56
d1ny1a_235 Probable polysaccharide deacetylase PdaA {Bacillus 94.31
d1z7aa1301 Hypothetical protein PA1517 {Pseudomonas aeruginos 93.76
d2c1ia1196 Peptidoglycan GlcNAc deacetylase C-terminal domain 93.68
d2j13a1235 Putative polysaccharide deacetylase BA0424 {Bacill 92.34
d2cc0a1192 Acetyl-xylan esterase {Streptomyces lividans [TaxI 90.23
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: alpha-mannosidase
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=0  Score=661.20  Aligned_cols=325  Identities=30%  Similarity=0.553  Sum_probs=301.9

Q ss_pred             CCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
Q ss_conf             35313573389998898049999926477886203233114347776224779999999999987199981999413579
Q 002542           22 VQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFF  101 (910)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~VhlvpHSH~D~gWl~t~d~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~  101 (910)
                      .++=.+.|+.+.....++++||||||||+|+||+||+++|+.        ..+++||+++++.|+++|++||+|+|+++|
T Consensus        33 ~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~--------~~~~~il~~~l~~l~~~p~~~F~~~~~~~~  104 (381)
T d3bvua3          33 KQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYF  104 (381)
T ss_dssp             TTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHH
T ss_pred             CCCCCEEECHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEECHHHH
T ss_conf             677512205421476788379993877888002375999999--------999999999999998799977998353899


Q ss_pred             HHHHHHCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
Q ss_conf             99997219899999999995896899820131201357896999999997999999880999831166289989845589
Q 002542          102 QRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAY  181 (910)
Q Consensus       102 ~~ww~~~~p~~~~~vk~LV~~GrlE~v~Ggwv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~vgw~iD~FGhs~~~p~  181 (910)
                      .+||++++|+.+++||+||++|||||+||||||+|||++|+|++||||++||+|++++||+.|++||+|||||||++||+
T Consensus       105 ~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~~~fG~~p~~~w~~D~FGhs~~lp~  184 (381)
T d3bvua3         105 ARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPY  184 (381)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECSSSSBCTHHHH
T ss_pred             HHHHHHCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH
T ss_conf             99999749999999999998798799687121463457997999999999999999975999735896388876577899


Q ss_pred             HHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCC-CCCCC----C-----CCCCCCCC---
Q ss_conf             98531399478882236565763202784059996089999987027763899-98899----9-----98643247---
Q 002542          182 LLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPE-NYEPP----P-----GGFYFEVN---  248 (910)
Q Consensus       182 ll~~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~g~d~~~~gs~I~t~~~~~-~Y~~p----~-----~~f~f~~~---  248 (910)
                      || +++||++++|+|++|++++.++..+.+||+|++.+...+|++||||++|. +|++|    |     ++|+|.+.   
T Consensus       185 il-~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~~p~~~~~d~~~~~~f~f~~~~~~  263 (381)
T d3bvua3         185 IL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSF  263 (381)
T ss_dssp             HH-HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTT
T ss_pred             HH-HHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99-85698869997413554200520146650430466689988045751655566885567887211345442123455


Q ss_pred             -CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHH---HHHHHHHHHHHHCCC--CEE
Q ss_conf             -88886226821113548999999999999850005898389960578765314788---998999999984179--748
Q 002542          249 -DKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTW---FRQLDKFIHYVNMDG--RVN  322 (910)
Q Consensus       249 -~~~~~~~d~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---f~n~~~li~~~N~~~--~~~  322 (910)
                       +.|++.+++..++++|++++++.|++++++++.+|+||+||+|+|+||+|.+|.+|   |+||++||+++|+..  .++
T Consensus       264 ~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~iN~~~~~~v~  343 (381)
T d3bvua3         264 GLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQ  343 (381)
T ss_dssp             SCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             77787666876662558999999999999998621688738981666878776103778887699999999718888818


Q ss_pred             EEECCHHHHHHHHHHC----CCCCCCCCCCCCCCCCC
Q ss_conf             9984934379998826----99999867788435534
Q 002542          323 ALYSTPSIYTDAKYAS----NESWPLKTDDFFPYADR  355 (910)
Q Consensus       323 i~~sT~~~Yf~a~~~~----~~~lp~~~gDffpy~~~  355 (910)
                      ++||||++||+||+++    +.+||+++||||||||+
T Consensus       344 i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~  380 (381)
T d3bvua3         344 AQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADR  380 (381)
T ss_dssp             EEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSS
T ss_pred             EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             9988999999999998752477887767887678889
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure