Citrus Sinensis ID: 002546

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------91
MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
ccccHHHHHHHHHHHHHcccccEEEEEEEHHHHHHccccccccccccccEEEEcccccEEEccccEEEcccHHHHHHHHHHHHHHHcHHcccccccccccccEEEEEEEEEEcccccccccEEEEEEEEEEcccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHccccccccccccHHHHcccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccHHHHHccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccEEEHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHcccc
cccHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcHHHHHHccccccccEEcccccccccHHcHHHHHHccHHHHHHHHHHHHHcccEEEcccccccccccEEEEEEEEEEEEcccccccEEEEEEEEEEEccccccccccccccccccccHHHccHHHHHHHHHHHHHHcccccccHHHcHHHHHcHHHcccccEEEEEEEEccEHHHHHHHHHHHHHHHHHHccEccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEccccccccEEcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHcccccccHHHHccccEEEEccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccHcHccccccccHHHHHHHHHHHHHHHHccccEEEHHHHHHEEcccccccEEEEEEHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccc
migiteytmSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLsadtsplrllddpergtIVEKLTEETLKDWNHLKELLSTCEAQRQIGetslnetssrsHQILRLTVESsacefigndpssltaTVNFVDLAGSERASQALSAgtrlkegchinrSLLTLGTVIRKlskgrnghvpfrdskLTRILQSSLGGNARTAIICtlsparshveQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENelrgsgpvfitpdsvsvLREKDLRIEKLEKEVDELTMQRDLARTEVENLLrgagkgsaesppvvyvddrppvvyagldhqyprlrvrsswdfenlnietqnmiphcidisvrssdtspcsdghsssdenffplpsleeNILKtkcneqdevsvpsfvgtdlhqeeieeqndenadvyknvgcvqmgkgttgytdlkksepslnkdrdlnmtsvdinpatsgvaetededeqcgesrSTTLKEQNELNNIIlnsvtpstvepspwrpekytptpsilnltrsrsckaclmtsyspdwfendekvvstppivfekdftgrprgleIKVSALKYAAdteisstnesqtsarsssfddlksqnvvtpevaenigtsarsstldiksqnvkapddaentrnsarspafadlksrnnktpgaaestsESISVAQMVEmteprnemqpadnvDTLLksgvpaksvrdigvdniqedfinhwewpLEFKRLQREIIELWHACNVSLVHRTYFFLLfkgdpkdsiyMEVEQRRLSFLKDsfsrgndaiedgRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREmfglnfaprrpnkkfslLKRSVISIL
migiteytmsdiYDYIEKHKEREFVLKFSAMEIYNESVRDLLSadtsplrllddperGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGetslnetssrshQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSagtrlkegchinrsLLTLGtvirklskgrnghvpfrdskLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRlenelrgsgpvfitpdsvsvlreKDLRIEKLekevdeltmqrdlARTEVENLlrgagkgsaesppvvyvDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEeqndenadvyKNVGCVQMgkgttgytdlkksepslnkdrdlnmtsvdinpatsgvaetededeqCGESRSTTlkeqnelnniilnsvtpstvepspwrpekytptpsilnltrsrSCKACLMTSyspdwfendekvvSTPPIvfekdftgrprgLEIKVSALKYAADteisstnesqtsarsssfddlksqnVVTPEVaenigtsarsstldiksqnvkapddaentrnsarspafadlksrnnktpgaaestsesiSVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSflkdsfsrgndaiedgrtvSLASSMKALRRERHMLSqhvkkrfsreqreNLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFglnfaprrpnkkfsllkrsvisil
MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAGKGSAESppvvyvddrppvvyAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
***ITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLD***RGTIVEKLTEETLKDWNHLKELLSTCE*******************ILRLTVESSACEFIGNDPSSLTATVNFVDLAG********SAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQREL**********GPVFITPDSVSVL********************************************VVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISV****************************************************************VYKNVGCVQMGK***************************************************************************************ILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYA***************************************************************************************************************************KSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFL**********************************************ENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAP******************
MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTV****************ATVNFVDLAGSERA**********KEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELS********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************REIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFS*****************MKALRRERHMLSQHVK******QRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPR*********KRSVISIL
MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIG************QILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRG********PPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVR***************ENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPAT*******************TLKEQNELNNIILNSVT*********RPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADT*********************SQNVVTPEVAENIGTSARSSTLDIKS******************PAFADLKS***************ISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
*IGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAG*************LKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGS****ITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSS***************************************NF*PLPSL***I********************************NADVYKNVGCVQMGK**************************************************************ILNSVT**************************************************TPPIVFEKDFTGRPR*L**********************************************************************************************************************************************NI*E*FINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRG*******RT*S**S*M*ALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPR*****************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIxxxxxxxxxxxxxxxxxxxxxLRGSGPVFITPDSVSVxxxxxxxxxxxxxxxxxxxxxxxxxxxxVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query909 2.2.26 [Sep-21-2011]
Q6S001685 Kinesin-related protein 1 yes no 0.312 0.414 0.437 2e-59
Q54NP8 1922 Kinesin-related protein 4 no no 0.281 0.133 0.437 4e-53
Q6RT24 2474 Centromere-associated pro yes no 0.278 0.102 0.463 6e-52
Q02224 2701 Centromere-associated pro yes no 0.297 0.099 0.425 6e-51
Q61771747 Kinesin-like protein KIF3 no no 0.277 0.337 0.384 8e-44
O15066747 Kinesin-like protein KIF3 no no 0.277 0.337 0.384 8e-44
P46871742 Kinesin-II 95 kDa subunit no no 0.280 0.343 0.374 1e-43
Q9P2E21029 Kinesin-like protein KIF1 no no 0.273 0.241 0.400 2e-43
P46869786 Kinesin-like protein FLA1 N/A no 0.257 0.297 0.394 2e-43
Q8L7Y8 1313 Kinesin-like protein KIN1 no no 0.266 0.184 0.417 4e-43
>sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1 Back     alignment and function desciption
 Score =  231 bits (589), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 194/302 (64%), Gaps = 18/302 (5%)

Query: 3   GITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSP--LRLLDDPERGTI 60
           GI   ++ DI+ YI++ KEREF+L+ S +EIYNE+V DLL  +     L++ + P  G  
Sbjct: 175 GIIPLSIQDIFTYIQECKEREFLLRVSYLEIYNETVNDLLGVNQENFNLKIHEHPVTGVY 234

Query: 61  VEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDP 120
           V  L EE +    H+  L+S  EA R +G TS N  SSRSH I ++ +ES      G+  
Sbjct: 235 VAGLKEEIVLSVEHVLSLISAGEAHRHVGSTSYNLQSSRSHTIFKMIIESKEVLPEGSGS 294

Query: 121 SSL-----TATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGH 175
             L      +T+N +DLAGSE+AS++  +  R KEG +IN+SLLTLGTVI KLS+   G+
Sbjct: 295 GGLESPVRYSTLNLIDLAGSEKASESTISAIRNKEGSYINKSLLTLGTVISKLSEKDTGY 354

Query: 176 VPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIV 235
           +P+RDSKLTR+LQ+SL GN+R AIICT++ A ++ E+S NTL FAS AK+++ NA+VN +
Sbjct: 355 IPYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASRAKKISNNAKVNEI 414

Query: 236 MSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDL 295
           + DKAL+K  + E++ L+++L          D++S   EK+L+    EKE  ++T Q  L
Sbjct: 415 LDDKALLKQYRNEIAELKSKLS---------DALST--EKELQETLTEKEKMKITNQELL 463

Query: 296 AR 297
            +
Sbjct: 464 HK 465
Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end.
Dictyostelium discoideum (taxid: 44689)
>sp|Q54NP8|KIF4_DICDI Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1 Back     alignment and function description
>sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1 Back     alignment and function description
>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 Back     alignment and function description
>sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1 Back     alignment and function description
>sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1 Back     alignment and function description
>sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95 PE=1 SV=1 Back     alignment and function description
>sp|Q9P2E2|KIF17_HUMAN Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=2 SV=3 Back     alignment and function description
>sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1 Back     alignment and function description
>sp|Q8L7Y8|KN12B_ARATH Kinesin-like protein KIN12B OS=Arabidopsis thaliana GN=KIN12B PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query909
297735041973 unnamed protein product [Vitis vinifera] 0.904 0.844 0.551 0.0
359476842960 PREDICTED: uncharacterized protein LOC10 0.889 0.842 0.553 0.0
356495368966 PREDICTED: uncharacterized protein LOC10 0.927 0.872 0.530 0.0
255581406959 conserved hypothetical protein [Ricinus 0.922 0.874 0.535 0.0
356561169937 PREDICTED: uncharacterized protein LOC10 0.880 0.853 0.516 0.0
449500027992 PREDICTED: uncharacterized LOC101218717 0.917 0.840 0.530 0.0
356540801953 PREDICTED: uncharacterized protein LOC10 0.915 0.873 0.521 0.0
356502134949 PREDICTED: uncharacterized protein LOC10 0.889 0.852 0.509 0.0
4494576421000 PREDICTED: uncharacterized protein LOC10 0.917 0.834 0.527 0.0
357483693963 Kinesin-related protein [Medicago trunca 0.895 0.845 0.510 0.0
>gi|297735041|emb|CBI17403.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/920 (55%), Positives = 633/920 (68%), Gaps = 98/920 (10%)

Query: 1   MIGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTI 60
           M GITEYTM+DIYD+IE+HKEREF+LKFSAMEIYNESVRDLLS+DT+PLRLLDDPERGTI
Sbjct: 117 MSGITEYTMADIYDHIERHKEREFLLKFSAMEIYNESVRDLLSSDTAPLRLLDDPERGTI 176

Query: 61  VEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDP 120
           VEKLTEETL+DWNHL ELLS CEAQRQIGET+LNETSSRSHQILRLTVESSA EF+GND 
Sbjct: 177 VEKLTEETLRDWNHLIELLSLCEAQRQIGETALNETSSRSHQILRLTVESSAREFLGNDN 236

Query: 121 SS-LTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFR 179
           SS LT+TVNFVDLAGSERASQ+LSAGTRLKEGCHINRSLLTLGTVIRKLSKGR+GH+P+R
Sbjct: 237 SSVLTSTVNFVDLAGSERASQSLSAGTRLKEGCHINRSLLTLGTVIRKLSKGRSGHIPYR 296

Query: 180 DSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDK 239
           DSKLTRILQSSLGGNA+TAIICT+SPARSHVEQSRNTLLFASCAKEVTTNAQVN+VMSDK
Sbjct: 297 DSKLTRILQSSLGGNAKTAIICTMSPARSHVEQSRNTLLFASCAKEVTTNAQVNVVMSDK 356

Query: 240 ALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTE 299
           ALVKHLQREL+RLEN LR   P  I  D+ ++LR+KDL+IEKLEKE+ ELT+QRDLA+++
Sbjct: 357 ALVKHLQRELARLENSLRSPEPTSICLDTATLLRDKDLQIEKLEKELRELTLQRDLAQSQ 416

Query: 300 VENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIET----QN 355
           VE+LL   G            DDR P+++A +D  YP+LRVR SW+ EN   ET     +
Sbjct: 417 VEDLLGVVG------------DDRLPMIWADMDDHYPKLRVRRSWESENPTSETFALADD 464

Query: 356 MIP------------HCIDISVRSSDTSPCSDGHS--SSDENFFPLPSLEENILKTKCNE 401
             P               D+ +R+ DTS  SDG+S   SD+++ PLP  E+N L    + 
Sbjct: 465 QTPASGLRTFALADDQTPDVGLRTCDTSQYSDGNSVDDSDDHYPPLPESEDNFLHNGTSA 524

Query: 402 QDEVSVPSFVGTDL--HQEEIEEQNDENA-DVYKNVGCVQMGKGTTGYTDLKKSEPSLNK 458
              V+ P+ V  DL    ++IEEQ++ N+ D+ K V C+++ + +    D++ +  S  +
Sbjct: 525 LVSVNTPNHVAIDLSSQWDKIEEQSNANSEDLCKEVRCIEI-EHSIMKRDIESNTLSPVR 583

Query: 459 DRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPW 518
           D D    ++++    +G       D    E  S  LKE  ELN      V PS  E SPW
Sbjct: 584 DTD----ALELKVVRNG-------DGANQEFTSPLLKEDKELNCNQRTVVIPSPQEFSPW 632

Query: 519 RPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEI 578
             EK   +   L LTRSRSCKA  M   S  WFE +EK   TP  VFEKDF GRP G + 
Sbjct: 633 LLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEKDFIGRPEGFQK 692

Query: 579 KVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQN 638
           K+++L Y  + +  S    QT   SSS D LK Q VVT    E++               
Sbjct: 693 KLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQ-VVTTSTDEDV--------------- 736

Query: 639 VKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADN 698
                                              TS +  VA + EM + + E + AD+
Sbjct: 737 -----------------------------------TSLNTYVAGLKEMAKFQYEERLADD 761

Query: 699 VDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYF 758
            ++  ++    K+V+D+G+D IQ+D  +   WP EFKRLQ+EIIELWH+CNVSLVHRTYF
Sbjct: 762 QESEPEANKSVKNVKDVGLDPIQDDLASPSRWPFEFKRLQKEIIELWHSCNVSLVHRTYF 821

Query: 759 FLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQH 818
           FLLF+GDP DSIYMEVE RRLSFLKD+FSRGN  + DG  ++ ASS++ALRRER ML + 
Sbjct: 822 FLLFQGDPADSIYMEVELRRLSFLKDTFSRGNQTVVDGHALTPASSVRALRREREMLCKQ 881

Query: 819 VKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWT-SKDLNHVAESAAIVSKLVTFVKP 877
           ++K+ S ++R +LFLKWG+ L  K+R LQLA+ LWT ++D+NH++ESA IV++L  FV+P
Sbjct: 882 MQKKLSEDERMSLFLKWGVQLNAKNRRLQLAYRLWTDTEDMNHISESANIVARLTRFVQP 941

Query: 878 DQAFREMFGLNFAPRRPNKK 897
           ++AF+EMFGLNF PRR +++
Sbjct: 942 EEAFKEMFGLNFTPRRMSRR 961

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476842|ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854194 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495368|ref|XP_003516550.1| PREDICTED: uncharacterized protein LOC100809766 [Glycine max] Back     alignment and taxonomy information
>gi|255581406|ref|XP_002531511.1| conserved hypothetical protein [Ricinus communis] gi|223528864|gb|EEF30865.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356561169|ref|XP_003548857.1| PREDICTED: uncharacterized protein LOC100775190 [Glycine max] Back     alignment and taxonomy information
>gi|449500027|ref|XP_004160983.1| PREDICTED: uncharacterized LOC101218717 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356540801|ref|XP_003538873.1| PREDICTED: uncharacterized protein LOC100802226 [Glycine max] Back     alignment and taxonomy information
>gi|356502134|ref|XP_003519876.1| PREDICTED: uncharacterized protein LOC100785401 [Glycine max] Back     alignment and taxonomy information
>gi|449457642|ref|XP_004146557.1| PREDICTED: uncharacterized protein LOC101218717 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357483693|ref|XP_003612133.1| Kinesin-related protein [Medicago truncatula] gi|355513468|gb|AES95091.1| Kinesin-related protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00036821001
SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (922 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query909
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 1e-109
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 4e-88
pfam11995162 pfam11995, DUF3490, Domain of unknown function (DU 2e-86
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 6e-85
cd00106328 cd00106, KISc, Kinesin motor domain 5e-72
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 2e-63
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 9e-61
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 2e-60
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 4e-57
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 7e-57
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 2e-55
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 9e-54
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 4e-49
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 4e-46
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 9e-45
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 1e-43
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 7e-43
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 7e-42
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 6e-32
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 9e-28
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information 
 Score =  340 bits (873), Expect = e-109
 Identities = 124/225 (55%), Positives = 158/225 (70%), Gaps = 3/225 (1%)

Query: 3   GITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVE 62
           GI    + DI+  I+   +REF+L+ S +EIYNE ++DLLS     LR+ +DP +G +V 
Sbjct: 99  GIIPLAVRDIFQRIQDTPDREFLLRVSYLEIYNEKIKDLLSPSPQELRIREDPNKGVVVA 158

Query: 63  KLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSS 122
            LTEE +    HL +L++  E  R +GET  NE SSRSH I +LT+ES       +    
Sbjct: 159 GLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSSRSHTIFQLTIESRERGDSESGTVR 218

Query: 123 LTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRN-GHVPFRDS 181
           + +T+N +DLAGSERASQ   AG R KEG  IN+SLLTLGTVI KLS+G+N GH+P+RDS
Sbjct: 219 V-STLNLIDLAGSERASQTG-AGERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPYRDS 276

Query: 182 KLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEV 226
           KLTRILQ SL GNARTAIICT+SPA SHVE++ NTL FAS AK+V
Sbjct: 277 KLTRILQPSLSGNARTAIICTISPASSHVEETLNTLKFASRAKKV 321

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|221365 pfam11995, DUF3490, Domain of unknown function (DUF3490) Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 909
PF11995161 DUF3490: Domain of unknown function (DUF3490); Int 100.0
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0242675 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG4280574 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG02431041 consensus Kinesin-like protein [Cytoskeleton] 100.0
PLN03188 1320 kinesin-12 family protein; Provisional 100.0
KOG0240607 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] 100.0
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 100.0
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 100.0
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 100.0
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 100.0
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 100.0
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 100.0
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 100.0
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 100.0
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 100.0
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 100.0
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 100.0
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 100.0
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 100.0
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 100.0
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 100.0
KOG0244913 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 100.0
KOG0246676 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 100.0
KOG0247809 consensus Kinesin-like protein [Cytoskeleton] 100.0
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 99.97
PRK10884206 SH3 domain-containing protein; Provisional 82.03
PF04420161 CHD5: CHD5-like protein; InterPro: IPR007514 Membe 80.02
>PF11995 DUF3490: Domain of unknown function (DUF3490); InterPro: IPR021881 This presumed domain is functionally uncharacterised Back     alignment and domain information 
Probab=100.00  E-value=4.9e-89  Score=662.43  Aligned_cols=160  Identities=69%  Similarity=1.121  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHHHhhhcccceeehheeeeeecCCCCCceEEEEEeehhhhhHHhhccCCCCCCCCccccHHHHHHHHHHHH
Q 002546          733 EFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRER  812 (909)
Q Consensus       733 ~F~~~~~~IIeLW~~CnVSlvHRTyFfLLFkGd~~D~iYmEVElRRL~~lk~~~~~~~~~~~~~~~~s~~ss~k~l~~Er  812 (909)
                      +||+||++||||||+|||||||||||||||||||+|+||||||||||+|||+||++|++|++|++++|++||+|||+|||
T Consensus         1 ~Fe~qq~~IIeLW~~C~VsLvHRTyFfLLFkGdpaD~iYmEVElRRLs~Lk~~fs~~~~~~~~~~~~s~~sS~kaL~rER   80 (161)
T PF11995_consen    1 EFERQQQEIIELWHACNVSLVHRTYFFLLFKGDPADSIYMEVELRRLSFLKETFSEGGQAAGGGHTLSLASSIKALRRER   80 (161)
T ss_pred             ChHHHHHHHHHHHHhcCcchhhhhhhhheecCCcccceEEEeehHHHHHHHHHhccCCcccCCCCcccHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCHHHHHHHHHhhCcCCCCcchhhHHhhhcCCcc-chhhHHHHHHHHHHHhcccCCCchhhhhhccccCC
Q 002546          813 HMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSK-DLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAP  891 (909)
Q Consensus       813 ~~l~k~~~~rl~~~ere~ly~kwgi~l~~k~Rrlql~~~lWt~~-d~~hv~eSa~~Vaklv~f~e~~~~~kemf~l~f~~  891 (909)
                      +||||||++|||.+|||+||.||||||+||||||||||+|||+| ||+||+|||+||||||||||||+|+||||||||+|
T Consensus        81 ~~L~k~m~~rls~eere~ly~kWgI~l~sK~RrlQL~~~LWt~~~d~~Hv~eSA~lVAkLvgf~e~g~~~KEMFgLnF~~  160 (161)
T PF11995_consen   81 EMLAKQMQKRLSREEREELYKKWGIPLDSKQRRLQLANRLWTDTKDMEHVRESAELVAKLVGFVEPGQASKEMFGLNFTP  160 (161)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhcCCCCcchHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhccccccHHHHHccCCCC
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999998


Q ss_pred             C
Q 002546          892 R  892 (909)
Q Consensus       892 ~  892 (909)
                      |
T Consensus       161 ~  161 (161)
T PF11995_consen  161 P  161 (161)
T ss_pred             C
Confidence            6

This domain is found in eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with PF00225 from PFAM. This domain is found associated with PF00225 from PFAM. This domain has two conserved sequence motifs: EVE and ESA.
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0242 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG4280 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>KOG0244 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>KOG0246 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG0247 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>PF04420 CHD5: CHD5-like protein; InterPro: IPR007514 Members of this family are probably coiled-coil proteins that are similar to the CHD5 (Congenital heart disease 5) protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query909
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 5e-49
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 2e-42
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 4e-37
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 9e-37
4a1z_A368 Eg5-1 Length = 368 1e-36
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 1e-36
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 1e-36
4a28_A368 Eg5-2 Length = 368 1e-36
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 1e-36
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 1e-36
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 1e-36
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 6e-36
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 7e-36
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 1e-35
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 1e-35
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 1e-35
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 4e-35
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 7e-35
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 7e-35
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 1e-34
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 1e-34
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 2e-34
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 2e-34
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 2e-34
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 8e-34
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 2e-33
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 1e-32
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 2e-32
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 3e-31
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 5e-31
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 1e-30
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 2e-27
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 2e-27
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 2e-27
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 3e-27
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 1e-26
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 1e-26
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 5e-26
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 7e-26
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 4e-25
2gry_A420 Crystal Structure Of The Human Kif2 Motor Domain In 1e-24
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 1e-24
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 2e-24
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 3e-24
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 1e-23
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 2e-23
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 2e-23
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 5e-23
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 5e-22
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 5e-22
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 7e-22
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 1e-21
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 3e-21
3pxn_A344 Crystal Structure Of The Drosophila Kinesin Family 4e-17
3dc4_A344 Crystal Structure Of The Drosophila Kinesin Family 7e-17
3kin_B117 Kinesin (Dimeric) From Rattus Norvegicus Length = 1 3e-15
2kin_B100 Kinesin (Monomeric) From Rattus Norvegicus Length = 3e-14
2kin_A238 Kinesin (Monomeric) From Rattus Norvegicus Length = 4e-12
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure 
Iteration: 1

 Score =  192 bits (489), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/247 (45%), Positives = 151/247 (61%), Gaps = 16/247 (6%)
Query: 2   IGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSA--DTSPLRLLDDPERGT 59
           +G+    + DI+  I+K  +REF+L+ S MEIYNE++ DLL       PL + +D  R  
Sbjct: 102 LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNV 161
Query: 60  IVEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVES------SAC 113
            V  LTEE +       + ++  E  R  GET +N+ SSRSH I R+ +ES      S C
Sbjct: 162 YVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNC 221
Query: 114 EFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGR- 172
           E      S   + +N VDLAGSERA+Q  +AG RLKEGC+INRSL  LG VI+KLS G+ 
Sbjct: 222 E-----GSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQV 276
Query: 173 NGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQV 232
            G + +RDSKLTRILQ+SLGGNA+T IICT++P     +++   L FAS AK +     V
Sbjct: 277 GGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYV 334
Query: 233 NIVMSDK 239
           N V +D+
Sbjct: 335 NEVSTDE 341
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 Back     alignment and structure
>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 Back     alignment and structure
>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 Back     alignment and structure
>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 Back     alignment and structure
>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query909
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 1e-113
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 3e-88
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 4e-83
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 8e-83
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 2e-81
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 2e-79
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 8e-79
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-78
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 9e-78
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 3e-76
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 3e-76
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 6e-76
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 2e-75
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 5e-75
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 9e-74
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 1e-72
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 2e-72
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 2e-71
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 2e-71
3u06_A412 Protein claret segregational; motor domain, stalk 3e-71
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 4e-70
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 1e-69
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 2e-68
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 5e-67
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 6e-67
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 3e-65
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 2e-37
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 2e-36
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
 Score =  349 bits (897), Expect = e-113
 Identities = 111/248 (44%), Positives = 150/248 (60%), Gaps = 6/248 (2%)

Query: 3   GITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADTS--PLRLLDDPERGTI 60
           G+    + DI+  I+K  +REF+L+ S MEIYNE++ DLL       PL + +D  R   
Sbjct: 103 GVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVY 162

Query: 61  VEKLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDP 120
           V  LTEE +       + ++  E  R  GET +N+ SSRSH I R+ +ES       N  
Sbjct: 163 VADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCE 222

Query: 121 SSL-TATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNG-HVPF 178
            S+  + +N VDLAGSERA+Q  +AG RLKEGC+INRSL  LG VI+KLS G+ G  + +
Sbjct: 223 GSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINY 282

Query: 179 RDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSD 238
           RDSKLTRILQ+SLGGNA+T IICT++P     +++   L FAS AK +     VN V +D
Sbjct: 283 RDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTD 340

Query: 239 KALVKHLQ 246
           +    H  
Sbjct: 341 ELEHHHHH 348
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 909
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 3e-50
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 1e-47
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 2e-46
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 9e-46
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 3e-45
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 2e-41
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 2e-41
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 2e-39
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 4e-38
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score =  178 bits (453), Expect = 3e-50
 Identities = 86/253 (33%), Positives = 137/253 (54%), Gaps = 9/253 (3%)

Query: 4   ITEYTMSDIYDYIEKHKE-REFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVE 62
           +    +  I+  I       E+ ++ S MEIY E +RDLL+     L + ++  RG  V+
Sbjct: 110 VIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVK 169

Query: 63  KLTEETLKDWNHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSS 122
            L E  +     + E++      R +  T++N+ SSRSH I  +T+     E      S+
Sbjct: 170 GLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE----TGSA 225

Query: 123 LTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSK 182
            +  +  VDLAGSE+  +  ++G  L+E   IN+SL  LG VI  L+ G++ HVP+RDSK
Sbjct: 226 KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSK 285

Query: 183 LTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALV 242
           LTRILQ SLGGN+RT +I   SP+  +  ++ +TL F   AK +   A+VN  +S     
Sbjct: 286 LTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPAE-- 343

Query: 243 KHLQRELSRLENE 255
             L++ L++ + +
Sbjct: 344 --LKQMLAKAKTQ 354
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query909
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 100.0
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 100.0
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 100.0
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 100.0
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 100.0
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 100.0
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 100.0
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 100.0
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=100.00  E-value=0  Score=436.76  Aligned_cols=248  Identities=34%  Similarity=0.535  Sum_probs=226.9

Q ss_pred             CCCHHHHHHHHHHHHHHCC-CCEEEEEEEEEEEECCEEEECCCCCCC---CCEEEECCCCCEEECCCEEEEECCHHHHHH
Q ss_conf             7717999999999988149-965999999999997914564999999---953664899985951562899429778999
Q 002546            2 IGITEYTMSDIYDYIEKHK-EREFVLKFSAMEIYNESVRDLLSADTS---PLRLLDDPERGTIVEKLTEETLKDWNHLKE   77 (909)
Q Consensus         2 ~GIIprai~dLF~~Ie~~~-e~~ftV~iSylEIYNE~VrDLLs~~~~---~LkI~eDp~~g~~V~gLtev~V~S~eel~~   77 (909)
                      +||+||++.+||..++..+ ...|.|++||+|||||+++|||++...   .+.+++|+.++++|+|++++.|.++++++.
T Consensus        99 ~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~  178 (364)
T d1sdma_          99 PGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKT  178 (364)
T ss_dssp             BCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHH
T ss_conf             51367899998865531034655369999888723632233576545554433133146760203530001177889789


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999842011333468888874348999997311322489997421000000366762211222223201245442233
Q 002546           78 LLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRS  157 (909)
Q Consensus        78 LL~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkS  157 (909)
                      +|..|.++|++++|.+|..|||||+||+|++.+...    .......++|+|||||||||..++++.|.+++|+.+||+|
T Consensus       179 ~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~----~~~~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~S  254 (364)
T d1sdma_         179 IIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNL----QTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKS  254 (364)
T ss_dssp             HHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEET----TTCCEEEEEEEEEECCCCSCCCC---------CCCTTCHH
T ss_pred             HHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECC----CCCEEEEEEEEEECHHHCCCCCCCCCCCCEEEECCCCCCC
T ss_conf             864066000445343541033363599999997036----7650356799840410035200146667502332335643


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf             99888899995079987556888455788685208996210674139998886999999999999722324310132369
Q 002546          158 LLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMS  237 (909)
Q Consensus       158 LlaLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s  237 (909)
                      |++|++||.+|+++. .|||||+||||+||+|+|||||+|+|||||||+..+++||++||+||++|++|+|.|++|+...
T Consensus       255 L~~L~~vi~aL~~~~-~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~~  333 (364)
T d1sdma_         255 LSALGDVISALSSGN-QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSSK  333 (364)
T ss_dssp             HHHHHHHHHHHHHTC-SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEECH
T ss_pred             HHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf             206899999997499-7577301121388786349995099999969870018999999999999842066783557989


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             79999999999999999982
Q 002546          238 DKALVKHLQRELSRLENELR  257 (909)
Q Consensus       238 ~k~lik~Lq~EI~~Lk~eLr  257 (909)
                         .+.+|+++++.|+.++.
T Consensus       334 ---~~~~l~~~i~~l~~~~~  350 (364)
T d1sdma_         334 ---EVARLKKLVSYWKEQAG  350 (364)
T ss_dssp             ---HHHHHHTTTTCC-----
T ss_pred             ---HHHHHHHHHHHHHHHHH
T ss_conf             ---99999999999999987
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure