Citrus Sinensis ID: 002557

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------91

MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVEEDNNFY

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHccEEEEEEccEEEEEEcccccccccccHHHHHccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHccEEEEEEccccccccHHHHHHHHHHHcccEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccc

ccccccccccccccHEcccccccccccccccEEEccccccccccccccEcccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHccccHcccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHHcccEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccEcccccccccccHHHHHHHHHHHccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccEcccccccccHHHHHHHHHHccEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccHHHcccc

malvpsrqfcpataifdsfqssfskfhgthfhffrcghsiplknrffyqnfssnsaheknpprktcsfstnnffsqhdkddnanlcsssswlvkwnkpnkynrlkppqasvnyrknnvdlsalgfartdsdgngvggvddggsTMGKIVEKLKKfgyvgdgdgdgdgdnderrgqgkerviekgsiEDIFYVEegllpnarggfskesplglgeevgsdgevkfpweKRKEEVAEGRWLVkrrssrtslaeltlpesELRRLRNLtfqtksktrikgaGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRgvsyevpsvqlnkriykrnelpassvsqatdKQIHKQISMSVNletaseeqetDFVREVKYEDEVEKLLDglgprytdwpgcdplpvdadmlpgivpgyqppfrvlpygvrstlARKEATNLQRLArvlpphfalgrsRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKltggtllsrnKDFLVfyrgknflspdVTEALQERERLAKSLQDEEEQARLRASAfvlpsietieksgtagtlKETLDAnsrwgkrlddshkENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESlkpaerqadpesitDEERFMFRKLGLRMKAFLLLGrrgvfdgtvenmHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYrgkdyqrpstlrpknLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQmnsvkgtgdeqlydkldsayatedddsedegDEAYLEMYaggndnedeidnsthnlemesdfpyhaqdqesetelmdseseaytvhstycastdiveednnfy

malvpsrqFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSnsaheknpprKTCSFSTNNFFSQHDKDDNANLCSSSSWlvkwnkpnkynrlkppqasvnyrKNNVDLSALGfartdsdgngvggvddggsTMGKIVEKLKKFgyvgdgdgdgdgdnderrgqgkerviekgsiedIFYVEEGLLPNARGGFSKesplglgeevgsdgevkfpwekrkeevaegrwlvkrrssrtslaeltlpeselrrlrnltfqtksktrikgagltqAVVDIIHekwktseivrlkiegapalnmKRMHEILErktgglviWRSGTAvslyrgvsyevpsvqlnkRIYKRNelpassvsqatdkqIHKQISMSvnletaseeqetdfvrevkyeDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSsiakialkrgvqlttsermvedikkltggtllsrnkDFLVFYRGKnflspdvtEALQERERLAKSLQDEEEQARLrasafvlpsietieksgtagtlketldansrwgkrlddshkenlvreaevrrhaylVQKLEKKLARAERKLLRAERAlskveeslkpaerqadpesitdeERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALAleaesggvlvsvdkiskGYAMVVyrgkdyqrpstlrpknllTKRKALARSIELQRQEALLKHVATLesnagrlrseieqmnsvkgtgdeqlyDKLDSAyatedddsedEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHStycastdiveednnfy

MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTdsdgngvggvddggsTMGKIVEKLKKFGYVgdgdgdgdgdNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQklekklaraerkllraeralSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATedddsedegdeAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVEEDNNFY

*******QFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNF**********************************CSSSSWLVKWNKPN******************VDLSALGF********************GKIVEKLKKFGYV*************************GSIEDIFYVEEGLLP**************************************RWLV**********************RNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYK*************************************FVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSP*****************************FVL******************************************VRRHAYLVQKL*****************************************RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ****************************LL*******************************************************************************************************VHSTYCAS***********

********FCPATAIFDSFQSSFSKFHGTHF********************************************************************************************************************IVEKLKKFGYV***********************************************************************************************LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP**********************************************************EKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAK**QDE*****************************************************************LEKKLARAERKLLRAE************************EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK*******************************************************************************************************************************************

MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSS***********TCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELP**********QIHKQISMSVN**********DFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVE*************SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAY***********DEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHA****************YTVHSTYCASTDIVEEDNNFY

*****SRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSN*A*******************************SSSWLVKWNKPNKYNRLKPPQASVNYR******************************MGKIVEKLKKFGYVG***************************EDI***EEGLL*****************************************************ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP************************************************VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI**IEK*GTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNS***********K*************************************************************************YCASTDIVE*****Y

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDxxxxxxxxxxxxxxxxxxxxxxxxxASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHxxxxxxxxxxxxxxxxxxxxxKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVEEDNNFY

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		908	2.2.26 [Sep-21-2011]
Q9FYT6		715	Chloroplastic group IIA i	N/A	no	0.545	0.692	0.417	1e-105
Q6YYA3		725	Chloroplastic group IIA i	no	no	0.605	0.758	0.389	1e-104
Q9LF10		720	Chloroplastic group IIA i	no	no	0.562	0.709	0.389	9e-97
Q67XL4		444	Uncharacterized CRM domai	no	no	0.193	0.396	0.351	2e-24
Q84N48		611	CRS2-associated factor 2,	N/A	no	0.148	0.220	0.322	3e-09
Q6Z4U2		428	CRS2-associated factor 1,	no	no	0.072	0.154	0.418	6e-09
Q657G7		607	CRS2-associated factor 2,	no	no	0.107	0.161	0.363	2e-08
Q0J7J7		366	CRS2-associated factor 2,	no	no	0.135	0.336	0.328	4e-08
Q8VYD9		405	CRS2-associated factor 1,	no	no	0.112	0.251	0.346	1e-07
Q9FFU1		358	CRS2-associated factor 2,	no	no	0.064	0.164	0.4	1e-07

>sp\|Q9FYT6\|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1	Back alignment and function desciption

 Score =  383 bits (983), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/513 (41%), Positives = 321/513 (62%), Gaps = 18/513 (3%)

Query: 274 RIKGAGLTQAVVDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA 332
           R K AG+T  VV  +  +W + E +  ++I      +M R  EILE KTGGLV+W  G  
Sbjct: 190 RAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDM 249

Query: 333 VSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDF 392
             +YRG  Y     Q N           +  S      +HK  +   N ++   +++ + 
Sbjct: 250 HFVYRGSKY-----QQN-----------AKHSHTFLTNVHKDDAFQENDQSICGQKDEEP 293

Query: 393 VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 452
           V+   YE EV +LLD LGPR+ DW    PLPVDAD+LP  VPG + P+R+ P GVR TLA
Sbjct: 294 VKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTLA 353

Query: 453 RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 512
            +E T L++LAR+LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T +E+M 
Sbjct: 354 DEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMA 413

Query: 513 EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 572
            ++K LTGGT++ RNKDF++ YRGK+FL   V + + +RE      Q +EE+ARL+A   
Sbjct: 414 WNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKA-VD 472

Query: 573 VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 632
            L  +  + +  + GT +E    ++++     ++    +  EAE  R    ++  E KL+
Sbjct: 473 SLQMVGELSEESSLGTFREYQGFHAKFVHENTENSNTMIELEAEKYRLEKELKDHEWKLS 532

Query: 633 RAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFD 692
              +K+ R+ +AL+K+  S  P+E+ AD E +T+EE+ MFR++G +M   +LLGRRG+FD
Sbjct: 533 VLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFD 592

Query: 693 GTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
           G +E +H HWK++E+VK+I K     Q    A  LE E+GG+L++V+K++  +A+++YRG
Sbjct: 593 GVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRG 652

Query: 753 KDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
           K+Y+RP+     NLLTKR+AL RSIE+QR+ ++
Sbjct: 653 KNYRRPAKSSFSNLLTKREALRRSIEVQRRGSM 685

Required for the splicing of group IIA introns in chloroplasts, and especially for atpF, by regulating the intron folding. Forms splicing particles with RNA. Also involved in chloroplast protein translation.
Zea mays (taxid: 4577)

>sp\|Q6YYA3\|CRS1_ORYSJ Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2 SV=1	Back alignment and function description

>sp\|Q9LF10\|CRS1_ARATH Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=2 SV=2	Back alignment and function description

>sp\|Q67XL4\|Y3544_ARATH Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1	Back alignment and function description

>sp\|Q84N48\|CAF2P_MAIZE CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1	Back alignment and function description

>sp\|Q6Z4U2\|CAF1M_ORYSJ CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1	Back alignment and function description

>sp\|Q657G7\|CAF2P_ORYSJ CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1	Back alignment and function description

>sp\|Q0J7J7\|CAF2M_ORYSJ CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2	Back alignment and function description

>sp\|Q8VYD9\|CAF1M_ARATH CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1	Back alignment and function description

>sp\|Q9FFU1\|CAF2M_ARATH CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		908
224111046		894	predicted protein [Populus trichocarpa]	0.924	0.938	0.675	0.0
147852748		902	hypothetical protein VITISV_010525 [Viti	0.938	0.944	0.641	0.0
225432918		902	PREDICTED: chloroplastic group IIA intro	0.932	0.939	0.641	0.0
356576487		835	PREDICTED: chloroplastic group IIA intro	0.893	0.971	0.645	0.0
449432614		874	PREDICTED: chloroplastic group IIA intro	0.939	0.975	0.627	0.0
255551945		773	conserved hypothetical protein [Ricinus	0.810	0.952	0.701	0.0
357441009		838	Chloroplastic group IIA intron splicing	0.878	0.952	0.608	0.0
297831030		873	hypothetical protein ARALYDRAFT_898801 [	0.884	0.919	0.601	0.0
30686898		881	CRM family member 3A [Arabidopsis thalia	0.864	0.891	0.596	0.0
9294196		850	unnamed protein product [Arabidopsis tha	0.830	0.887	0.588	0.0

>gi\|224111046\|ref\|XP_002315729.1\| predicted protein [Populus trichocarpa] gi\|222864769\|gb\|EEF01900.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1129 bits (2920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/899 (67%), Positives = 701/899 (77%), Gaps = 60/899 (6%)

Query: 1   MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
           MALVPSRQ        DSFQSSFSKFHGT   FFR   S PL++   Y    + S  +KN
Sbjct: 1   MALVPSRQLY-----IDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGY----ACSITDKN 51

Query: 61  PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120
           P  K+ SF T       DK    NL + SSW   WNKPNK N  + PQA  +YR NN + 
Sbjct: 52  PSTKSTSFPT-------DKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNS 104

Query: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERV 180
           S  G                  STM KIVEKLKK GY+       DGD +E + + +ERV
Sbjct: 105 SGSG------------------STMEKIVEKLKKHGYM-------DGDVNENKERMQERV 139

Query: 181 IEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV 240
           IEKGS+EDIFYVEEG+LPNARGGFSKESPLG+ +   SDGEV+FPWEK K+E  EG+W  
Sbjct: 140 IEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKW-T 198

Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
            R  SRTSLAELTLPESELRRLRNLT+ TKSKTR+ G G+TQ VVD IH+KWKTSEI R+
Sbjct: 199 ARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARV 258

Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
           K+EGAPALNMKRMHEILE KTGGLVIWRSG  VSLYRGVSYE P+++  KRI+K+ E  +
Sbjct: 259 KVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSS 318

Query: 361 SSVSQAT------------DKQIHK-QISMSVNLETASEEQETDFVREVKYEDEVEKLLD 407
           +S+  AT            D +IH  +    +N+E A++ +ET    +VKYEDEV+KLLD
Sbjct: 319 NSLPAATSITIGSQSKNSPDNEIHAPRPKTEINVEAANQ-KETKTQTDVKYEDEVDKLLD 377

Query: 408 GLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLP 467
           GLGPRYTDWPG DPLPVDADMLPG++PGYQPPFR+LPYGVR TL R+++T+L+RLARVLP
Sbjct: 378 GLGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLP 437

Query: 468 PHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRN 527
           PHFA+GRSRQLQGLAVAMIKLWEKSSI K+ALKRGVQLTTSERM EDIKKLTGG LLSRN
Sbjct: 438 PHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRN 497

Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAG 587
           KDFLVFYRGK+FLSP+V+EAL ERERLAKSLQDEEEQARLRASA V+PS E +E+SG AG
Sbjct: 498 KDFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAG 557

Query: 588 TLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSK 647
           +L+ETLDA+++WGKRLDD HKE ++REAE+ RHA +V++LEKKLA A+RKL RAER L+K
Sbjct: 558 SLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNK 617

Query: 648 VEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 707
           VE  LKP+ERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL
Sbjct: 618 VEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 677

Query: 708 VKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLL 767
           VKII+K K+F+Q KKIALALEAESGGVLVSVDKISKGYA++VYRGKDYQRPS LRPKNLL
Sbjct: 678 VKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLL 737

Query: 768 TKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT 827
           TKRKALARSIE+QR EAL  HV+ LE    ++RSEIEQM  VK  GDE+LYD+LDSAY T
Sbjct: 738 TKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEELYDRLDSAYLT 797

Query: 828 --EDDDSEDEGDEAYLEMYAGGN--DNEDEIDNSTHNLEMESDFPYHAQDQESETELMD 882
             + DDSEDEGDEAYLE Y   N  D +DE D++ HN  ++++   + Q QESETE  D
Sbjct: 798 DDDADDSEDEGDEAYLETYNSENDVDYDDETDSTVHNAHLDTNLLNNVQIQESETEPED 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|147852748\|emb\|CAN79523.1\| hypothetical protein VITISV_010525 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225432918\|ref\|XP_002280226.1\| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Vitis vinifera] gi\|297737163\|emb\|CBI26364.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356576487\|ref\|XP_003556362.1\| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|449432614\|ref\|XP_004134094.1\| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Cucumis sativus] gi\|449504099\|ref\|XP_004162252.1\| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|255551945\|ref\|XP_002517017.1\| conserved hypothetical protein [Ricinus communis] gi\|223543652\|gb\|EEF45180.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|357441009\|ref\|XP_003590782.1\| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula] gi\|355479830\|gb\|AES61033.1\| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297831030\|ref\|XP_002883397.1\| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata] gi\|297329237\|gb\|EFH59656.1\| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|30686898\|ref\|NP_188947.2\| CRM family member 3A [Arabidopsis thaliana] gi\|332643191\|gb\|AEE76712.1\| CRM family member 3A [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|9294196\|dbj\|BAB02098.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		908
TAIR\|locus:2094558		881	CFM3A "CRM family member 3A" [	0.848	0.874	0.592	1.1e-242
TAIR\|locus:2094997		848	EMB1865 "embryo defective 1865	0.656	0.702	0.460	9.4e-137
TAIR\|locus:2096662		1011	CFM2 "CRM family member 2" [Ar	0.784	0.704	0.390	1.6e-125
TAIR\|locus:2181372		720	CRS1 "ortholog of maize chloro	0.436	0.55	0.429	4.8e-95
TAIR\|locus:2094438		444	LOH1 "LAG One Homologue 1" [Ar	0.169	0.346	0.362	1.9e-21
TAIR\|locus:2123276		343	AT4G13070 [Arabidopsis thalian	0.162	0.431	0.387	1.3e-18
TAIR\|locus:2091458		491	AT3G27550 [Arabidopsis thalian	0.150	0.279	0.342	3e-16
TAIR\|locus:2056558		372	AT2G28480 [Arabidopsis thalian	0.143	0.349	0.383	8.8e-16
TAIR\|locus:2126694		405	AT4G31010 [Arabidopsis thalian	0.111	0.249	0.390	2.9e-11
TAIR\|locus:2160195		358	AT5G54890 [Arabidopsis thalian	0.120	0.304	0.350	3.2e-09

TAIR\|locus:2094558 CFM3A "CRM family member 3A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2279 (807.3 bits), Expect = 1.1e-242, Sum P(3) = 1.1e-242
 Identities = 476/804 (59%), Positives = 581/804 (72%)

Query:    64 KTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSAL 123
             K  +FS+ N      +   +  C++  WL  WN+  K N+ KPP+  VNYRK        
Sbjct:    43 KGVTFSSRNDQIASRRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEG------ 96

Query:   124 GFARTXXXXXXXXXXXXXX-XTMGKIVEKLKKFGYVXXXXXXXXXXNDERRGQGKERVIE 182
              F+ +                TM KIVEKLKK+GY+          N E     +ER IE
Sbjct:    97 RFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQ------NKEIE---QERRIE 147

Query:   183 KGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEV-GSDGEVKFPWEK---RKEEVAEGRW 238
             KGS+EDIFYVEEG LPN RGGF++ES LG GE V GS+G+V FPWEK   ++++  E  W
Sbjct:   148 KGSVEDIFYVEEGKLPNTRGGFTEESLLG-GENVIGSNGDVGFPWEKMSAKEKKELEAEW 206

Query:   239 LVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIV 298
               K+ + R SLAE+TLPESELRRLRNLTF+T SK RI+G G+TQ  VD I EKWK++EIV
Sbjct:   207 TAKKEN-RYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIV 265

Query:   299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL 358
             RLKIEGA ALNM++MHEILE+KTGGLVIWRSGT++SLYRGVSYE+PS + NK+  +R E 
Sbjct:   266 RLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ--RREET 323

Query:   359 PASSV----SQAT---DKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGP 411
             P  +V     + T   DK   K     +  ET S E++      V+YEDE+++LLD LGP
Sbjct:   324 PPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGP 383

Query:   412 RYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFA 471
             R+ DWPG +PLPVDAD+LPG +P Y+PPFRVLPYGVRS+L  KEAT L+RLAR +PPHFA
Sbjct:   384 RFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFA 443

Query:   472 LGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFL 531
             LGRSRQLQGLA AM++LWEKS +AKIA+KRGVQ TTSERM ED+KKLTGG +LSRNKDFL
Sbjct:   444 LGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFL 503

Query:   532 VFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSGTAGTLK 590
             VFYRGKNFLS +V +AL E+ER  ++LQDEEEQARLR +SA ++PS E   K  +AGTL 
Sbjct:   504 VFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLG 563

Query:   591 ETLDANSRWGKRLDDS-HKENLVREAEVRRHAYLVQXXXXXXXXXXXXXXXXXXXXSKVE 649
             ETLDA  +WGK LDD  H + + +E E+ RH  LV+                    +KVE
Sbjct:   564 ETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVE 623

Query:   650 ESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 709
               LKPAE++ DPESITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWKYRELVK
Sbjct:   624 VCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 683

Query:   710 IIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK 769
             IIVK KTFD  KK+ALALEAESGG+LVS+DK++KGYA++VYRG+DY+RP+ LRPKNLLTK
Sbjct:   684 IIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTK 743

Query:   770 RKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATXX 829
             RKALARSIELQR+E LLKH++T+++ A +LR+EIEQM  V   GDE+LY+KLD AYA+  
Sbjct:   744 RKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSD 803

Query:   830 XXXXXXXXX-AYLEMYAGGNDNED 852
                       A+ E YA G D E+
Sbjct:   804 EETDEEDDDDAFPETYAEGEDGEE 827

GO:0003723 "RNA binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0000373 "Group II intron splicing" evidence=IMP

GO:0048316 "seed development" evidence=IGI

TAIR\|locus:2094997 EMB1865 "embryo defective 1865" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2096662 CFM2 "CRM family member 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2181372 CRS1 "ortholog of maize chloroplast splicing factor CRS1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2094438 LOH1 "LAG One Homologue 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2123276 AT4G13070 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2091458 AT3G27550 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2056558 AT2G28480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2126694 AT4G31010 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2160195 AT5G54890 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		908
smart01103		84	smart01103, CRS1_YhbY, Escherichia coli YhbY is as	9e-22
pfam01985		84	pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	1e-21
smart01103		84	smart01103, CRS1_YhbY, Escherichia coli YhbY is as	5e-19
pfam01985		84	pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	4e-18
smart01103		84	smart01103, CRS1_YhbY, Escherichia coli YhbY is as	8e-13
pfam01985		84	pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	2e-11

>gnl\|CDD\|198171 smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly	Back alignment and domain information

 Score = 89.8 bits (224), Expect = 9e-22
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 664 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKI 723
           +T +++   R L   +K  + +G+ G+ +G +E +    +  EL+K+ V     +  K+I
Sbjct: 1   LTGKQKRYLRSLAHHLKPVVQIGKNGLTEGVLEEIDEALEKHELIKVKVLGNDREDRKEI 60

Query: 724 ALALEAESGGVLVSVDKISKGYAMVVYR 751
           A  L  E+G  LV V     G  +V+YR
Sbjct: 61  AEELAEETGAELVQV----IGKTIVLYR 84

GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been retained in plants. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome. Length = 84

>gnl\|CDD\|190184 pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	Back alignment and domain information

>gnl\|CDD\|198171 smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly	Back alignment and domain information

>gnl\|CDD\|190184 pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	Back alignment and domain information

>gnl\|CDD\|198171 smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly	Back alignment and domain information

>gnl\|CDD\|190184 pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		908
KOG1990		564	consensus Poly(A)-specific exoribonuclease PARN [R	100.0
PRK10343		97	RNA-binding protein YhbY; Provisional	99.93
TIGR00253		95	RNA_bind_YhbY putative RNA-binding protein, YhbY f	99.93
PF01985		84	CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR	99.92
PRK10343		97	RNA-binding protein YhbY; Provisional	99.92
TIGR00253		95	RNA_bind_YhbY putative RNA-binding protein, YhbY f	99.91
PF01985		84	CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR	99.9
COG1534		97	Predicted RNA-binding protein containing KH domain	99.9
COG1534		97	Predicted RNA-binding protein containing KH domain	99.89
KOG1990		564	consensus Poly(A)-specific exoribonuclease PARN [R	98.15

>KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair]	Back alignment and domain information

Probab=100.00  E-value=4.4e-82  Score=716.68  Aligned_cols=533  Identities=46%  Similarity=0.666  Sum_probs=499.5

Q ss_pred             cccccccccccCCCHHHHHHHHhhhcCCCCeEEeCCCCCCHHHHHHHHHHHHhCCeEEEEecCCChhhHHHHHHHHHHHh
Q 002557          242 RRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKT  321 (908)
Q Consensus       242 kk~s~pslAEltLT~kErr~LR~lAh~LkPvV~IGK~GLTd~VVeeIh~awk~hELVKVK~l~~~~~dmk~~ae~LEekT  321 (908)
                      ++.+ +++|++++.+.++++||..|..+.-.+  +++|+|+.+++.|++.|+.+|+++++|....+.+|.+.+++++..|
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~y~k~k~~~~~~~~~q~~~~~~~~~~~~~~~~~~   79 (564)
T KOG1990|consen    3 NFES-LSLAELTVDEADLRRLRLVATGMTSAP--WKAGSTFDTVEAIYLKWKDNEEVYLKFQFGLCLFMKRSHEALEMST   79 (564)
T ss_pred             cccc-hhHHHhhcCHHHHHHHhhhhccceecc--cccccchhhhHHHHHHHHhhhhhheeeccccchhHHHhhhHhhccC
Confidence            3456 999999999999999999999998888  9999999999999999999999999999999999999999999999


Q ss_pred             CC-eEEEEEccEEEEeecCCCCCCccchhhhhhhccCCCCCCCCccchhhhhhcccccccccccccccccccccccchHH
Q 002557          322 GG-LVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED  400 (908)
Q Consensus       322 Gg-eVVqrIG~viVLYRgsnY~~p~~~~~~~~~~~~e~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  400 (908)
                      |+ .+||+.|.....|++..|..|..-.++.                             ++      +....-..+++.
T Consensus        80 ~~n~~~~~~g~~~s~~~~~~~~~~~~~~~~~-----------------------------~~------~~~~~~~~~~~~  124 (564)
T KOG1990|consen   80 GGNFVVWSRGDSISSPEFLCQRSPVDFVARQ-----------------------------QE------NQAGKWPSELEK  124 (564)
T ss_pred             CCceeeeecCccccCCccceeecchhhhhhh-----------------------------ch------hhhhhhHHHHHH
Confidence            99 9999999999999999998875432211                             00      000111467899


Q ss_pred             HHHhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCCcccCCCCCCccCCHHHHHHHHHhcccCCCeEEecccchhhH
Q 002557          401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQG  480 (908)
Q Consensus       401 E~d~LLD~LGPRf~dW~g~~PlPVDaDLLP~vVpgyk~PfRllP~Gvr~~Lt~~E~T~LRrLar~lPpHfaLGRNr~lqG  480 (908)
                      |.+.+||++||+|.|||+.+|+|||+||||++||+|.+|||.+|+|++++|+..|+|.+|++|+.+||||+||+++.+||
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~i~~~~~p~r~l~~~~~~~l~~~~~~~~r~~~~~~p~~~~~~~~~~~~~  204 (564)
T KOG1990|consen  125 EKNELLDSLGPELSDWGGSDRLSVDADLLPEKIPDYMRPFRTLPVGSPPLLTSIESTLLRRLGYKLPPHFALGRSRKLQG  204 (564)
T ss_pred             HHHHHhhccCcccccCCCCCCccchhhhchhhhhcccChhccCCCCChhhhhhHHHHHHHHhcccccccceehhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcceeeeeeccCCCCCchHHHHHHH--hhcccceeeeccCCeEEEEecCCCCcHHHHHHHHHHHHHHHhh
Q 002557          481 LAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI--KKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSL  558 (908)
Q Consensus       481 LA~AIvKLWEKs~IAKIaiKrGvqnT~ne~MaeEL--K~LTGGvLLsRnk~~IV~YRGKDFLp~~Va~al~eRe~~~~~~  558 (908)
                      ||.+|+++|++|+++||+|+||+++|.++.||.+|  +.+||++|++||+.++|+|||++||+ .|.++|.++.......
T Consensus       205 ~~~~~~~~~~k~~~~k~~~~rg~~~~~~~~~a~~l~~~~~tg~~lv~hN~~~dv~y~~~~Fl~-~lp~~l~~f~~~~~~f  283 (564)
T KOG1990|consen  205 LAVAMVSFWEKHEFAKILIKRGVLETRKERMADELQELLLTGKVLVLHNKLLDVMYRYKNFLS-PLPSTLEEFTDSSSMF  283 (564)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcchhhhccchHHHHHHHHhcCCeEEeeccceeeeeehhhccc-ccchhHHHhhhhhhhh
Confidence            99999999999999999999999999999999999  99999999999999999999999999 9999999999998899


Q ss_pred             hhHHHHHHhhhhcccccccccccccCccchhHHHHHhhhccccCCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002557          559 QDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK-ENLVREAEVRRHAYLVQKLEKKLARAERK  637 (908)
Q Consensus       559 q~~EE~aR~~a~~~~~~~~~~~~~~~~aGtl~e~~~a~~~~g~~~~~~~~-~~~~~e~~~~r~~~~~k~~e~kL~~a~~K  637 (908)
                      ++.++.+|+.+....       .....++|+.|+..+.++|+..+.-... ..+..+.++..+++..+.+.++++.+++|
T Consensus       284 p~~~~~~~~~~~~~~-------~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  356 (564)
T KOG1990|consen  284 PNIEDTKRLAKLSEY-------QKLNLKATLLELARAKAKKEKEIERRSISSRLKLEFEKASSEKLTEAIFHKLEKAKKK  356 (564)
T ss_pred             hhhHHHHHhhccccc-------cchhhhhhHHHHHHHhcccccCcccccccchhhhhhhccchhhHHHHHHHHHhhhhhh
Confidence            999999999983311       1246899999999999999999975543 46788899999999999999999999999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCHHHHHHHHhhccCCcceEEeCCCCCCHHHHHHHHHHHHhCCeEEEEEcCCCH
Q 002557          638 LLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTF  717 (908)
Q Consensus       638 ~~rae~~L~K~e~~~~p~~~~~d~E~LT~eER~~LRklAhkLKPvV~IGKrGVTdgVIeeIh~hwk~hELVKVkv~~~~~  717 (908)
                      +.++++.|++++....|++...|++.+|.+++.+++++|.+|++++.+|++|+++|+|.+||+||++||++||+|+....
T Consensus       357 ~~~~~~~l~~~~~~~~~~~~~~~~e~~t~ee~~~~~k~g~k~~~~~~~~rrg~f~g~i~n~~l~wk~~e~~k~i~~~~~~  436 (564)
T KOG1990|consen  357 LASANRILAKLEDPKIPAELRYDPESITEEERLMLRKVGLKMKRRLLSGRRGVFDGVIENMHLHWKSRELVKVICKEKNL  436 (564)
T ss_pred             ccchhhhhhcccccccccccccchhhcChHHHHHHHHHHHhhccccccCCcccccceeecchhhhhhcccceeeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             -HHHHHHHHHHHHHhCCEEEeccccccccEEEEEecCCCCCCCCCCCCccccHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002557          718 -DQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNA  796 (908)
Q Consensus       718 -~d~keiAe~Le~~SGg~LVqV~k~~IG~tiILYRgkNY~rP~~l~PknlLTKrkAl~rS~e~qr~~~l~~hI~~l~~~i  796 (908)
                       .+++..|..++.++|+++|.|+++..|+.|+.|||+||++|..++|.++|+||+|+.+++++|++++++.||..+..++
T Consensus       437 ~~~~~~~a~~le~esg~~~v~~~~~~~~~ai~~yr~k~y~~p~~l~P~~~l~~~k~~~~~~~~~~~~a~~~~i~~~~~~~  516 (564)
T KOG1990|consen  437 PSQVKQYASALERESGGILVSIDKNPKGYAIIAYRGKNYDRPTSLRPRNLLSRRKALERSLEEQRKEALKSHISDLEQEI  516 (564)
T ss_pred             cHHHHHHHHHHHHHhCCceeeeccCCchhhHHHhhhhhccCCcccCchhhhcccCCccccHHHHHHHHHhhhcchhhhhH
Confidence             9999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCcHHHHHh
Q 002557          797 GRLRSEIEQMNSVKGTGDEQLYDK  820 (908)
Q Consensus       797 ~~l~~~l~~~~~~~~~~d~~ly~~  820 (908)
                      ++++.+++.|.......|.+.|++
T Consensus       517 e~~~~~~~~~~~~~~~~d~~~en~  540 (564)
T KOG1990|consen  517 EQLQASVEAMPAINKKDDLEEENS  540 (564)
T ss_pred             HHhhcchhcccccccccchHHHhh
Confidence            999999999999988999999998

>PRK10343 RNA-binding protein YhbY; Provisional	Back alignment and domain information

>TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family	Back alignment and domain information

>PF01985 CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR001890 The CRM domain is an ~100-amino acid RNA-binding domain	Back alignment and domain information

>PRK10343 RNA-binding protein YhbY; Provisional	Back alignment and domain information

>TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family	Back alignment and domain information

>PF01985 CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR001890 The CRM domain is an ~100-amino acid RNA-binding domain	Back alignment and domain information

>COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		908
1jo0_A		98	Hypothetical protein HI1333; structural genomics,	2e-12
1jo0_A		98	Hypothetical protein HI1333; structural genomics,	3e-09
1rq8_A		104	Conserved hypothetical protein; structural genomic	6e-12
1rq8_A		104	Conserved hypothetical protein; structural genomic	2e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A Length = 98	Back alignment and structure

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 17/89 (19%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 663 SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKK 722
           +++ +++   + L   +   ++LG  G+ +G +  +     + EL+K+ V     +  + 
Sbjct: 2   TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQL 61

Query: 723 IALALEAESGGVLVSVDKISKGYAMVVYR 751
           I  A+  E+    V       G+ +V+YR
Sbjct: 62  IINAIVRETKAAQVQT----IGHILVLYR 86

PyMOL of 1jo0

>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A Length = 98	Back alignment and structure

>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1 Length = 104	Back alignment and structure

>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1 Length = 104	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 66.4 bits (161), Expect = 3e-11
 Identities = 79/531 (14%), Positives = 167/531 (31%), Gaps = 131/531 (24%)

Query: 432 IVPGYQPPF------RVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAM 485
           I+  ++  F      + +    +S L+++E  ++     ++    A+  + +L       
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI-----IMSKD-AVSGTLRL------- 67

Query: 486 IKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLV-----FYRGKNFL 540
              W         L +  +    ++ VE+        +L  N  FL+       R     
Sbjct: 68  --FW-------TLLSKQEE--MVQKFVEE--------VLRINYKFLMSPIKTEQRQP--- 105

Query: 541 SPDVTEALQERERLAKSLQD--------EEEQARLRASAFVLPSIETIEKSGTAGTLKET 592
           S      +++R+RL    Q          +   +LR +   L   + +   G  G+ K  
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 593 LDANSRWGKRLDDSHKENL--VREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEE 650
           +  +     ++       +  +          +++ L+K L + +          S ++ 
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 651 SLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL-VK 709
            +          SI  E R + +         L+L    V +         W    L  K
Sbjct: 226 RI---------HSIQAELRRLLKSKPYE-NCLLVL--LNVQNAKA------WNAFNLSCK 267

Query: 710 IIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK 769
           I++   T    K++   L A +    +S+D  S           D         K+LL  
Sbjct: 268 ILLT--TRF--KQVTDFLSAATTTH-ISLDHHSMTL------TPDEV-------KSLL-- 307

Query: 770 RKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATED 829
            K L    +   +E L  +   L   A  +R  +   ++ K    ++L   ++S+    +
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367

Query: 830 DDSEDEGDEAY----------------LEMYAGGNDNED--EIDNSTHNLEM------ES 865
                E  + +                L +        D   + N  H   +      ES
Sbjct: 368 ---PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424

Query: 866 DFPYHAQDQESETELMDSES------EAYTVHSTYCASTDIV--EEDNNFY 908
                +   E + +L +  +      + Y +  T+  S D++    D  FY
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD-SDDLIPPYLDQYFY 474

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 65.3 bits (158), Expect = 8e-11
 Identities = 92/618 (14%), Positives = 191/618 (30%), Gaps = 160/618 (25%)

Query: 282 QAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVS-----LY 336
           + V D+        EI  + +         R+   L  K   +V       +      L 
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM 95

Query: 337 RGVSYEV--PSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVR 394
             +  E   PS+     I +R+ L         D Q+  +   +V     S  Q    +R
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRL-------YNDNQVFAK--YNV-----SRLQPYLKLR 141

Query: 395 EVKYEDEVEK--LLDGLGPRYTDWPGC--DPLPVDADMLPGIVPGYQPPFRV--LPYGVR 448
           +   E    K  L+DG+        G     + +D  +   +    +  F++  L     
Sbjct: 142 QALLELRPAKNVLIDGVL-------GSGKTWVALDVCLSYKVQC--KMDFKIFWLNLKNC 192

Query: 449 STLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTS 508
           ++        LQ+L   + P++                 +  +    +  L+R ++    
Sbjct: 193 NS-PETVLEMLQKLLYQIDPNWTSRSDH--------SSNIKLRIHSIQAELRRLLKSKPY 243

Query: 509 ERM------VED---IKKLTGG--TLL-SRNK---DFLVFYRGKNFLSPDVTEALQERER 553
           E        V++             LL +R K   DFL      +      +  L   E 
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 554 ---LAKSL----QDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDS 606
              L K L    QD   +  L  +   L  I        A ++++ L     W     D 
Sbjct: 304 KSLLLKYLDCRPQDLPREV-LTTNPRRLSII--------AESIRDGLATWDNWKHVNCDK 354

Query: 607 HKE------NLVREAEVRRHAYLVQKLEKKLARAERKLLRAERAL-SKVEESLKPAERQA 659
                    N++  AE R+  +       +L+     +      + + +   +     ++
Sbjct: 355 LTTIIESSLNVLEPAEYRKM-F------DRLS-----VFPPSAHIPTILLSLIWFDVIKS 402

Query: 660 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYR-------ELVKIIV 712
           D   + ++   + +          L+ ++   + T+    ++ + +        L + IV
Sbjct: 403 DVMVVVNK---LHKY--------SLVEKQP-KESTISIPSIYLELKVKLENEYALHRSIV 450

Query: 713 ----KVKTFDQAKKIALALEAESGGVLVSVDKISKGY--AMVVYRGKDYQRPSTLRPKNL 766
                 KTFD    I   L+                Y  + + +  K+ +          
Sbjct: 451 DHYNIPKTFDSDDLIPPYLD---------------QYFYSHIGHHLKNIEH--------- 486

Query: 767 LTKRKALARSIELQRQ--EALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
             +R  L R + L  +  E  ++H +T  + +G + + ++Q+           Y      
Sbjct: 487 -PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK---------FYKP---- 532

Query: 825 YATEDDDSEDEGDEAYLE 842
           Y  ++D   +    A L+
Sbjct: 533 YICDNDPKYERLVNAILD 550

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 49.9 bits (118), Expect = 4e-06
 Identities = 83/604 (13%), Positives = 178/604 (29%), Gaps = 180/604 (29%)

Query: 188 DIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVK-----FPW---EKRKEEVAEG--- 236
           D   V++      +   SKE    +   + S   V      F W    K++E V +    
Sbjct: 34  DCKDVQDMP----KSILSKEE---IDHIIMSKDAVSGTLRLF-WTLLSKQEEMVQKFVEE 85

Query: 237 ------RWLVK--RRSSRTSLAELTLPESELRRLRNLTFQTKSK---TRIKG-AGLTQAV 284
                 ++L+   +   R       +   +  RL N   Q  +K   +R++    L QA+
Sbjct: 86  VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYLKLRQAL 144

Query: 285 VDIIHEKWKTSEIVRLKIEGAP-------ALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
           +++   K     ++   I+G         AL++   +++  +     + W     ++L  
Sbjct: 145 LELRPAKN----VL---IDGVLGSGKTWVALDVCLSYKVQCKMDFK-IFW-----LNLKN 191

Query: 338 GVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQET---DFVR 394
             S E     L K +Y+             D     +   S N++      +      ++
Sbjct: 192 CNSPETVLEMLQKLLYQ------------IDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 395 EVKYE------DEV--EKLLDGLGPRYTDWPGCDPLPV---DADMLPGIVPGYQPPFRVL 443
              YE        V   K  +           C  L +      +   +         + 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNL------SCKIL-LTTRFKQVTDFLSAATTTHISLD 292

Query: 444 PYGVRSTLARKEATNLQRLARVLP------PHFALGRSRQLQGLAVAMIK----LWE--- 490
                 TL   E  +L  L + L       P   L  + +   +    I+     W+   
Sbjct: 293 H--HSMTLTPDEVKSL--LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 491 -----------KSSIAKIA---LKR----------GVQLTT----------SERMVEDI- 515
                      +SS+  +     ++             + T           +  V  + 
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 516 KKLTGGTLLSRN-KDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE-EEQARLRASAFV 573
            KL   +L+ +  K+  +       +  ++   L+    L +S+ D         +   +
Sbjct: 409 NKLHKYSLVEKQPKESTISIPS---IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465

Query: 574 LPSIE------------TIEKSGTAGTLKET-LD----------ANSRWGKR------LD 604
            P ++             IE        +   LD           ++ W         L 
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525

Query: 605 DSHK-ENLVREAEVRRHAYLVQKLEKKLARAERKLLRAE------RALSKVEESL-KPAE 656
                +  + + + +    LV  +   L + E  L+ ++       AL   +E++ + A 
Sbjct: 526 QLKFYKPYICDNDPKYER-LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584

Query: 657 RQAD 660
           +Q  
Sbjct: 585 KQVQ 588

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 47.2 bits (111), Expect = 2e-05
 Identities = 99/665 (14%), Positives = 178/665 (26%), Gaps = 241/665 (36%)

Query: 15  IFDSFQSSFSKFHGTHF-HFFRCGHSIPLKNRFF----------YQNFSSNSAHEKN--- 60
           + D  +S  SK       H      ++    R F           Q F        N   
Sbjct: 38  VQDMPKSILSK---EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFV-EEVLRINYKF 93

Query: 61  ---PPRKTC---SFSTNNFFSQHDKDDNANLCSSSSWLVKWN--KPNKYNRLKPPQASVN 112
              P +      S  T  +  Q D+     L + +    K+N  +   Y +L+  QA + 
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQVFAKYNVSRLQPYLKLR--QALLE 146

Query: 113 YRKN-NVDLSALGFARTDSDGNGVGGVDDGGS-----------------------TMGK- 147
            R   NV +            +GV G   G +                        +   
Sbjct: 147 LRPAKNVLI------------DGVLGS--GKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 148 -----IVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
                ++E L+K  Y  D +     D+             K  I  I      LL +   
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSN---------IKLRIHSIQAELRRLLKSKPY 243

Query: 203 GFSKESPLGLGEEVGSDGEVKFPWEK-----------RKEEVAEGRWLVKRRSSRTSLAE 251
              +   L L   V  + +    W             R ++V +   L    ++  SL  
Sbjct: 244 ---ENCLLVL-LNV-QNAKA---WNAFNLSCKILLTTRFKQVTDF--LSAATTTHISLDH 293

Query: 252 ----LTLPESE--LRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEK-------W------ 292
               LT  E +  L +  +   Q   +  +         + II E        W      
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR---RLSIIAESIRDGLATWDNWKHV 350

Query: 293 ---KTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVS------LYRGVSYEV 343
              K + I+   +        ++M +        L ++     +       ++  V    
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFD-------RLSVFPPSAHIPTILLSLIWFDVIKSD 403

Query: 344 PSV---QLNKR--IYKRNELPASSV---------SQATDKQIHKQISMSVNLETASEEQE 389
             V   +L+K   + K+ +    S+             +  +H+ I     ++       
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI-----VD------- 451

Query: 390 TDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPY---- 445
                   Y            P+  D     P  +D          Y   +  + +    
Sbjct: 452 -------HYNI----------PKTFDSDDLIPPYLD---------QYF--YSHIGHHLKN 483

Query: 446 ---GVRSTLARKEATNL----QRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIA 498
                R TL R    +     Q++        A G         +  +K ++   I    
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT----LQQLKFYKP-YICD-- 536

Query: 499 LKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSL 558
                     ER+V  I             DFL     +N +    T+ L+    +A  L
Sbjct: 537 -----NDPKYERLVNAI------------LDFLPKI-EENLICSKYTDLLR----IA--L 572

Query: 559 QDEEE 563
             E+E
Sbjct: 573 MAEDE 577

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		908
d1jo0a_		97	d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus i	1e-21
d1jo0a_		97	d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus i	8e-16
d1jo0a_		97	d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus i	1e-12
d1rq8a_		96	d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphy	3e-21
d1rq8a_		96	d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphy	6e-17
d1rq8a_		96	d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphy	6e-12

>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} Length = 97	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: YhbY-like
family: YhbY-like
domain: YhbY homologue HI1333
species: Haemophilus influenzae [TaxId: 727]

 Score = 87.8 bits (218), Expect = 1e-21
 Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 663 SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKK 722
           +++ +++   + L   +   ++LG  G+ +G +  +     + EL+K+ V     +  + 
Sbjct: 2   TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQL 61

Query: 723 IALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
           I  A+  E+    V       G+ +V+YR  +        P+
Sbjct: 62  IINAIVRETKAAQVQT----IGHILVLYRPSE--EAKIQLPR 97

PyMOL of d1jo0a_

>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} Length = 97	Back information, alignment and structure

>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} Length = 97	Back information, alignment and structure

>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} Length = 96	Back information, alignment and structure

>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} Length = 96	Back information, alignment and structure

>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} Length = 96	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		908
d1rq8a_		96	Hypothetical protein SAV1595 {Staphylococcus aureu	99.9
d1jo0a_		97	YhbY homologue HI1333 {Haemophilus influenzae [Tax	99.9
d1jo0a_		97	YhbY homologue HI1333 {Haemophilus influenzae [Tax	99.89
d1rq8a_		96	Hypothetical protein SAV1595 {Staphylococcus aureu	99.89

>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: YhbY-like
family: YhbY-like
domain: Hypothetical protein SAV1595
species: Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]

Probab=99.90  E-value=2.7e-23  Score=180.16  Aligned_cols=90  Identities=18%  Similarity=0.303  Sum_probs=66.8

Q ss_pred             CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCE
Q ss_conf             99999999999611089872882789987999999999987299398996289856499999999998499289898548
Q 002557          253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA  332 (908)
Q Consensus       253 tLT~kErr~LR~lAh~LkpvV~IGK~GVTd~VIeeIheaLk~hELVKIKil~~~~~dmk~v~e~LEekTGgeVVqrIG~v  332 (908)
                      |||++|+++||++||+|+|+|+|||+|||++|+++|+++|++||||||||++++..+++++++.|+++|||.+||+||++
T Consensus         1 mLt~kqr~~LR~~ah~l~p~v~IGk~Glt~~vi~ei~~~l~~~ELIKvk~~~~~~~~~~~~~~~l~~~t~a~~V~~iG~~   80 (96)
T d1rq8a_           1 MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSM   80 (96)
T ss_dssp             CCCHHHHHHHHHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCCCHHHHHHHHHHHHHHHTEEEEEEETTE
T ss_pred             CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCE
T ss_conf             96989999999976689998998899878999999999997597159996579989999999999998699999998999


Q ss_pred             EEEEECCCCC
Q ss_conf             9995068999
Q 002557          333 VSLYRGVSYE  342 (908)
Q Consensus       333 iVLYRg~nY~  342 (908)
                      +||||+++++
T Consensus        81 ~vlyR~~~~~   90 (96)
T d1rq8a_          81 IVIYRESKEN   90 (96)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEECCCCC
T ss_conf             9999579889

PyMOL of d1rq8a_

>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]}	Back information, alignment and structure