Citrus Sinensis ID: 002578

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900------
MSPLSSKKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVTQGAEFEDVGISQEPIGIDDGDAMSIQREDGAFREVALLDNFSLSSSKNYGNEQVGLISDSDDDDCMEMSSPATSSSPLSVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDEHPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRDAQCTRDPEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPIEEAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSLEVEVKDQPLAEYEGSDYPETTGKTDSFSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKADEQLVVKKSRPLPKDRKQLKELNGGLPKELIP
ccccccccccEEEccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccccEEcccccccccccccccccccccccccccccccHHHcccccHHcccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccEEEccccEEcccccccccEEEEccccEEEEEcccccccccEEEcccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHcccccccHHcccccccccccHHHHcccccccccccccccccccccccccEEccccccccEEEEHHHHcccccccccHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccEEEEcccccccEEEEEEEccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHcccccccccccHHHHHHHHccccccccc
ccccccccccEEEEcccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccEEcccccccccccccEEEEEccEEEEcccccccEEEEEEcccEEEEEEccccccccEEEEEEHHHEEEEEHHHHccccEEEEEEEEEcccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHccccccHccccHHHHccccccccccccccccccccEEEEccccccccEEEEHHHHHHccccccccHHHHHHHHHHHHHHccccccccEEEEEccEcHHHcccccccccccHHHHHHHHHHHHHccccEccccEEEEEEccccEEEEEEEEccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHcccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccEEEEEcccccccccccccccccEEHHccccccccHHHHcccccccccccccccccccccccccccEEEcccccccccHHHcHcccccccccccccccccccccccEEcccccccccccEEEEEccccccHHcccccccccccccccccccccccccEEEccccccccccccEEEccccccccccccccccccccccccccccccEEEccccEcccccccccccEEEEccccccccccccccccccccHHHHcccccccccc
msplsskkkykvfefseEDELVEKTAKKMLgkysnprknqrhsspidkykflqffsqgtkpqqKKIISEIVdvdagvtqgaefedvgisqepigiddgdamsiqredgAFREVALLdnfslsssknygneqvglisdsddddcmemsspatsssplsvngVLLEEQVaecgscghqsdmenkMVVVFPdfivhgdnnytesRVTFSCSFVTVESsvingtkgtfsfEWAIGdviniqtgwcgsVGTAIVALILKskdstgvrnqneipgsdllrfsvcdqhwpeRLNKIISLDVRYkerwntvdfdskyeensllsqksrlpskccsiefdepfedvvypkddpdavliserdvkllepdtfindTIIDFYIKYLNNkiqtdrqqdfhffnSFFFRkladldkdpssaceGRAAFQRVRKWTRKVNLFEkdyifipvnyslHWSLIVichpgevpyfrddeiekslkvpcilhmdsikgsHRGLKNLIQGYLSEEwkerhsntddevpskflrlqfaplelpqqqnsfdcGLFLLHYVELFLKEALsnfnplkkkqvsnflnrnwfppaevSMKRAQIKKLLYEISKdhsrrkdpsadsvdehpssqptndkigkETGAVILGqmwnptlpgqqgfssisdaEKGIQisisgaspqrdaqctrdpefsfkeqcklgtgpaslsdlrYQHVTSRLRRsimspieeaketdeqmatspynvenFKQVTRLARkycgvppkiwcdkqfspdfdildedesmKECRTSLEvevkdqplaeyegsdypettgktdsfsnsseglsdfvvedsqetsgiaagivedseeenakldgkenkdspcfkgetcnlsheVLLSETIYLQENIMLISNEVTMSKADEQLVvkksrplpkdrkqlkelngglpkelip
msplsskkkykvfefseedelvEKTAKKmlgkysnprknqrhsspIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVTQGAefedvgisqepiGIDDGDAMSIQREDGAFREVALLDNfslsssknygnEQVGLISDSDDDDCMEMSspatsssplsVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILkskdstgvrnqneipgsdllrfSVCDQHWPERLNkiisldvryKERWNtvdfdskyeensllsqksrlpskCCSIEFDEPFEDVVYPKDDPDAVLiserdvkllepdtfiNDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRaafqrvrkwtrkVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMdsikgshrgLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEIskdhsrrkdpsadsvdehpssqptndkigKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQIsisgaspqrdAQCTRDPEFSFKEQCKLgtgpaslsdlryQHVTSRLRRSIMSPIEEAketdeqmatspynvenfKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSlevevkdqplaeyegsdypettgktdsfsnSSEGLSDFVVEDSQETSGIaagivedseeenakldgkenkdspcFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKADEQLVvkksrplpkdrkqlkelngglpkelip
MSPLSSKKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVTQGAEFEDVGISQEPIGIDDGDAMSIQREDGAFREVALLDNFSLSSSKNYGNEQVGLIsdsddddCMEMsspatsssplsVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDfhffnsfffRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDEHPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRDAQCTRDPEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPIEEAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSLEVEVKDQPLAEYEGSDYPETTGKTDSFSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKADEQLVVKKSRPLPKDRKQLKELNGGLPKELIP
***********************************************KYKFLQFFSQG*****KKIISEIVDVDAGVTQGAEFEDVGISQEPIGI*************AFREVALLDNF****************************************GVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVR**NEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYE************SKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEW*************KFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYE**********************************AVILGQMWNP****************************************************************************************YNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDIL*************************************************************************************CFKGETCNLSHEVLLSETIYLQENIMLISNEV*************************************
************************************************************************************************************************************************************************************NKMVVVFPDFIVHGDNNYTESRVT********************SFEWAIGDVINIQTGWCGSVGTAIVALI************************V******************************************************EPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLY***********************************************************************************************************************************************************************************************************************************************************************************************************************************
********KYKVFEFSEEDELVEKTAKKMLGK***********SPIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVTQGAEFEDVGISQEPIGIDDGDAMSIQREDGAFREVALLDNFSLSSSKNYGNEQVGLISDSDDD***************SVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEW**********VPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEIS***********************NDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISIS*************PEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPIEEAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSLEVEVKDQPLAEYEGSDYPETTGKTDSFSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKADEQLVVKKSRPLPKDRKQLKELNGGLPKELIP
*******KKYKVFEFSEEDELVEKTAKKMLGKYSNPR***RHSSPIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVT*****EDV*ISQEP*****GDAMS*QREDGAFREVALLDNF***************************************NGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHS*****************************************************KGIQISISGASPQRDAQCTRDPEFSFKEQCKLGTGP*SLSD**YQHVTSRLRRSIMSPIEEAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSLEVEVKDQPL**Y********************GLSDFVVEDSQETSGIAAGIVEDSEEENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKA*************************LP*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSPLSSKKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFFSQGTKPQQKKIISEIVDVDAGVTQGAEFEDVGISQEPIGIDDGDAMSIQREDGAFREVALLDNFSLSSSKNYGNEQVGLISDSDDDDCMEMSSPATSSSPLSVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDEHPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRDAQCTRDPEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPIEEAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRTSLEVEVKDQPLAEYEGSDYPETTGKTDSFSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIMLISNEVTMSKADEQLVVKKSRPLPKDRKQLKELNGGLPKELIP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query906 2.2.26 [Sep-21-2011]
Q0WKV8774 Probable ubiquitin-like-s yes no 0.690 0.808 0.401 1e-125
Q8L7S0931 Probable ubiquitin-like-s no no 0.509 0.496 0.5 1e-123
Q2PS26584 Ubiquitin-like-specific p no no 0.250 0.388 0.346 4e-35
O13769638 Ubiquitin-like-specific p yes no 0.267 0.379 0.332 4e-33
Q8RWN0571 Ubiquitin-like-specific p no no 0.256 0.406 0.335 1e-32
A7MBJ21047 Sentrin-specific protease yes no 0.260 0.225 0.324 9e-31
D3ZF421037 Sentrin-specific protease yes no 0.260 0.227 0.327 2e-30
Q8BUH81037 Sentrin-specific protease yes no 0.260 0.227 0.324 2e-29
Q9BQF61050 Sentrin-specific protease no no 0.260 0.224 0.321 3e-29
Q91ZX6588 Sentrin-specific protease no no 0.208 0.321 0.283 8e-19
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis thaliana GN=ULP2A PE=2 SV=2 Back     alignment and function desciption
 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 287/714 (40%), Positives = 408/714 (57%), Gaps = 88/714 (12%)

Query: 5   SSKKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFFSQGTKPQQK 64
           S +K   VF++S+ED+ VE+ +KK+L K+ +P   ++H   IDKY+FL+ F++ T+ + K
Sbjct: 10  SKRKPIDVFDYSDEDDRVEEESKKLLRKFDSP-VTKKHHCAIDKYEFLRCFAKDTQSESK 68

Query: 65  KIISEIVDVDAGVTQGAEFEDVGISQEPIGID-DGDAMSIQREDGAFREVALLDNFSLSS 123
            +   ++DV+           V + +EP   +  GD  S            L+D  S  S
Sbjct: 69  VLQHIVIDVE-----------VPVKEEPSRCELSGDGNS-----------DLIDVISNGS 106

Query: 124 SKNYGNEQVGLISDSDDDDCMEMSSPATSSSPLSVNGVLLEEQVAECGSCGHQSDMENKM 183
            +  G + +   S S++D+     +   +S P                   H+ D EN  
Sbjct: 107 HRRIGIDSLTSSSLSENDEVSTGEATNPASDP-------------------HEVDPENAQ 147

Query: 184 VVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGS 243
           V++ PD I++GD   T S++TFS + + VESS +N TKGTFS +W I D+I I++ WC  
Sbjct: 148 VLIIPDVIIYGDIYCTNSKLTFSRNCMNVESSSVNATKGTFSCQWTIEDIIKIESQWCLE 207

Query: 244 VGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTV 303
           V TA V ++LKS+   GV    +I G DLL+FSV D  W + +  I SLD RYK  W   
Sbjct: 208 VETAFVNVLLKSRKPEGVDIAKDISGIDLLKFSVYDPKWSKEVETIRSLDSRYKNIW--- 264

Query: 304 DFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFI 363
            FD+  E   +      L +   ++   + FED+VYP+ +PDAV++ ++D++LL+P  FI
Sbjct: 265 -FDTITESEEIAFSGHDLGTSLTNLA--DSFEDLVYPQGEPDAVVVRKQDIELLKPRRFI 321

Query: 364 NDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTR 423
           NDTIIDFYIKYL N+I    +  FHFFN FFFRKLA+LDK   S C GR A+QRV+KWT+
Sbjct: 322 NDTIIDFYIKYLKNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAYQRVQKWTK 381

Query: 424 KVNLFEKDYIFIPVNYSLHWSLIVICHPGE-VPYFRDDEIEKSLKVPCILHMDSIKGSHR 482
            V+LFEKDYIFIP+N S HWSL++ICHPGE VP      +E   +VPCILH+DSIKGSH+
Sbjct: 382 NVDLFEKDYIFIPINCSFHWSLVIICHPGELVP----SHVENPQRVPCILHLDSIKGSHK 437

Query: 483 -GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELF 541
            GL N+   YL EEWK RH NT ++  S+   +Q   LELPQQ+NSFDCGLFLLHY++LF
Sbjct: 438 GGLINIFPSYLREEWKARHENTTND-SSRAPNMQSISLELPQQENSFDCGLFLLHYLDLF 496

Query: 542 LKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPS---AD 598
           + +A + FNP    + +NFL RNWFP  E S+KR  I +LLY + K H    DPS   A+
Sbjct: 497 VAQAPAKFNPSLISRSANFLTRNWFPAKEASLKRRNILELLYNLHKGH----DPSILPAN 552

Query: 599 SVDEHPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRD 658
           S  E P    +N +  +ET +  + +  N   P     S+++D  +    S         
Sbjct: 553 SKSEPPHCGVSN-RNDQETESENVIECCNWIKPFDGSSSTVTDISQTKTCS--------- 602

Query: 659 AQCTRDPEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPI-EEAKETDEQ 711
                 P+    ++     G        Y   +S+LR+  MSPI EE +E+ E+
Sbjct: 603 ------PDLILSKEVSYSGG--------YDPPSSKLRKVFMSPIVEEVQESCEK 642
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 6EC: 8
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana GN=ULP2B PE=2 SV=3 Back     alignment and function description
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana GN=ULP1D PE=1 SV=1 Back     alignment and function description
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2 Back     alignment and function description
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana GN=ULP1C PE=1 SV=1 Back     alignment and function description
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1 Back     alignment and function description
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1 Back     alignment and function description
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1 Back     alignment and function description
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4 Back     alignment and function description
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query906
255563308887 sentrin/sumo-specific protease, putative 0.769 0.785 0.485 1e-170
224095802871 predicted protein [Populus trichocarpa] 0.798 0.830 0.418 1e-141
357445979991 Sentrin-specific protease [Medicago trun 0.772 0.706 0.420 1e-132
224063319 1041 predicted protein [Populus trichocarpa] 0.766 0.666 0.391 1e-129
449470062915 PREDICTED: probable ubiquitin-like-speci 0.718 0.711 0.419 1e-128
449508962917 PREDICTED: LOW QUALITY PROTEIN: probable 0.718 0.709 0.419 1e-128
356518421938 PREDICTED: probable ubiquitin-like-speci 0.717 0.692 0.408 1e-126
30689748783 putative ubiquitin-like-specific proteas 0.695 0.804 0.404 1e-124
302595999774 RecName: Full=Probable ubiquitin-like-sp 0.690 0.808 0.401 1e-123
255545960 1042 sentrin/sumo-specific protease, putative 0.724 0.629 0.411 1e-122
>gi|255563308|ref|XP_002522657.1| sentrin/sumo-specific protease, putative [Ricinus communis] gi|223538133|gb|EEF39744.1| sentrin/sumo-specific protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 364/749 (48%), Positives = 469/749 (62%), Gaps = 52/749 (6%)

Query: 5   SSKKKYKVFEFSEEDELVEKTAKKMLGK---------------YSNPRKNQRHSSPIDKY 49
           +S K+  VF+FSE+D  +E  +KK++ +               Y   +++   SS IDKY
Sbjct: 11  TSSKRLSVFDFSEDDGRIETASKKLINRFRNRNDDNNNNNKNNYVKRKRHSFFSSSIDKY 70

Query: 50  KFLQFFSQGTKPQQKK-------IISEIVDVDAGVTQGAEFEDVGISQEPIGIDDGDA-- 100
           KFL+ F+   K  + +       +  E +DVD      A+ E++G+     G+ D DA  
Sbjct: 71  KFLECFAGWNKAPESESRNEPIDVDDEPIDVDTDRGMTADCEEIGV-----GLVDIDANS 125

Query: 101 ------------MSIQREDGAFREVALLDNFSLSSSKNYGNEQVGLISDSDDDDCMEMSS 148
                       +S+ +ED A +E++ LD   LSSS  Y N   G+ISD  D D   MSS
Sbjct: 126 AAHCHKLTVSSPISMIQEDSAVKEISGLDVHVLSSSSKYENVPRGMISD--DGDKSGMSS 183

Query: 149 PATSSSPLSVNGVLLEEQVAECGSCGHQSDMENKMVVVFPDFIVHGDNNYTESRVTFSCS 208
            +TS   L  N V   E   E  S GH+ D+ N  VVVFPDFI++GD   TES +TFS S
Sbjct: 184 SSTSICMLEENEVPSTEPETEYCSLGHKIDILNNAVVVFPDFILYGDIYCTESCLTFSSS 243

Query: 209 FVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGSVGTAIVALILKSKDSTGVRNQNEIP 268
            + VE   ING+KG+F+ EWAI D+++I++ WCG V TA++ L LK   S  V N NE  
Sbjct: 244 HIRVEGLTINGSKGSFNAEWAIADIVSIESEWCGRVETAMIKLHLKPNVSESVGNSNESS 303

Query: 269 GSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTV-DFDSKYEENSLLSQKSRLPSKCCS 327
           G D L+ SV D  W E    I SLDVRY++ WN + D D + ++ +     S    K   
Sbjct: 304 GIDELKVSVYDPCWSEGQEAIKSLDVRYRDIWNVIIDSDQEKDDKAFAESYSVAFPKPFL 363

Query: 328 IEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDF 387
              DE FEDV+YP+ DPDAV IS+RDV+LL P+TFINDTIIDFYIK+L NKIQ + Q  +
Sbjct: 364 HVLDETFEDVIYPEGDPDAVSISKRDVELLRPETFINDTIIDFYIKFLKNKIQPEDQHRY 423

Query: 388 HFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIV 447
           HFFNSFFFRKLADLDKDPS ACEGRAAFQRVRKWT+KVNLFEKD+IFIPVNYSLHWSLIV
Sbjct: 424 HFFNSFFFRKLADLDKDPSGACEGRAAFQRVRKWTKKVNLFEKDFIFIPVNYSLHWSLIV 483

Query: 448 ICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEV 507
           ICHPGEV +FRD+E E + KVPCILHMDSI+GSHRGLKNLIQ YL EEWKERHS   D+ 
Sbjct: 484 ICHPGEVAHFRDEECEIAPKVPCILHMDSIRGSHRGLKNLIQSYLCEEWKERHSEILDDA 543

Query: 508 PSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFP 567
            SKF  L+F PLELPQQ+NSFDCGLFLLHYVELFL+    NF+P K  + SNFLNRNWFP
Sbjct: 544 SSKFSCLRFVPLELPQQENSFDCGLFLLHYVELFLEGVPINFSPFKITESSNFLNRNWFP 603

Query: 568 PAEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDEHPSSQPTNDKIGKETGAVILGQMWN 627
           P E S+KR++IKKL+ EI +  S +K P  +S  ++  SQ   D   + TG   L +  +
Sbjct: 604 PLEASLKRSRIKKLICEILEARS-QKAPQGESNAKNTCSQ-FFDTDEQGTGKEYLEKTCS 661

Query: 628 PTLPGQQGFSSISDAEKGIQISISGASPQRDA-QCTRDPEFSFKEQCKLGTGPASLSDLR 686
             +   QG SS    +  ++IS+     QR   Q  ++P    +E  + GT   +  D  
Sbjct: 662 -LVKMYQGDSSSPSTD--LRISLPSVYCQRVVQQQIKEPGLHTRELFEPGTSVRASGD-N 717

Query: 687 YQHVTSRLRRSIMSPIEEAKETDEQMATS 715
           Y  + +  R   MSPI+E +E+ E+++ S
Sbjct: 718 YLEMEA-CRPGYMSPIQEVEESVERISDS 745

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224095802|ref|XP_002310486.1| predicted protein [Populus trichocarpa] gi|222853389|gb|EEE90936.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357445979|ref|XP_003593267.1| Sentrin-specific protease [Medicago truncatula] gi|355482315|gb|AES63518.1| Sentrin-specific protease [Medicago truncatula] Back     alignment and taxonomy information
>gi|224063319|ref|XP_002301094.1| predicted protein [Populus trichocarpa] gi|222842820|gb|EEE80367.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449470062|ref|XP_004152737.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449508962|ref|XP_004163455.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin-like-specific protease 2B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356518421|ref|XP_003527877.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like [Glycine max] Back     alignment and taxonomy information
>gi|30689748|ref|NP_195088.2| putative ubiquitin-like-specific protease 2A [Arabidopsis thaliana] gi|332660854|gb|AEE86254.1| putative ubiquitin-like-specific protease 2A [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|302595999|sp|Q0WKV8.2|ULP2A_ARATH RecName: Full=Probable ubiquitin-like-specific protease 2A gi|215400504|gb|ACJ66288.1| EL6 SUMO protease [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255545960|ref|XP_002514040.1| sentrin/sumo-specific protease, putative [Ricinus communis] gi|223547126|gb|EEF48623.1| sentrin/sumo-specific protease, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query906
DICTYBASE|DDB_G02935081035 DDB_G0293508 [Dictyostelium di 0.267 0.233 0.361 2e-33
TAIR|locus:2195598584 ULP1D "UB-like protease 1D" [A 0.256 0.397 0.327 3.8e-28
FB|FBgn0030420681 CG12717 [Drosophila melanogast 0.272 0.362 0.319 4.3e-28
TAIR|locus:2194574571 OTS2 "OVERLY TOLERANT TO SALT 0.311 0.493 0.299 3.4e-27
ZFIN|ZDB-GENE-070912-345991 si:dkey-100n23.3 "si:dkey-100n 0.133 0.122 0.382 3.8e-27
UNIPROTKB|I3LCP9971 SENP6 "Uncharacterized protein 0.142 0.132 0.338 4.3e-26
UNIPROTKB|A7MBJ21047 SENP7 "Sentrin-specific protea 0.132 0.114 0.390 1e-25
DICTYBASE|DDB_G0289557778 DDB_G0289557 "peptidase C48 fa 0.264 0.308 0.295 1.3e-25
UNIPROTKB|J9NV481047 SENP7 "Uncharacterized protein 0.126 0.109 0.388 1.3e-25
UNIPROTKB|I3LG401038 SENP7 "Uncharacterized protein 0.126 0.110 0.380 3.4e-25
DICTYBASE|DDB_G0293508 DDB_G0293508 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 410 (149.4 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
 Identities = 99/274 (36%), Positives = 151/274 (55%)

Query:   337 VVYPKDDPD----AVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDXXXXXX 392
             +VYP+   +     V I   D+K LEP  F+ND+II+FY  Y+ +K+ T+ Q+       
Sbjct:   426 MVYPETQENNKMSQVKIIRNDIKRLEPGEFLNDSIIEFYSMYIKDKVLTEEQRKKYFFFN 485

Query:   393 XXXRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPG 452
                 KL   ++D  +      A++ V+KWT K +LF KD+IF+P+NY+ HWSL++IC+PG
Sbjct:   486 SFFYKLFT-NEDNENL-----AYEDVKKWTGKEDLFSKDFIFVPINYAAHWSLMIICYPG 539

Query:   453 EVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFL 512
                     E EKS   PC++++DS+        N ++ YL+ EWK + +  D   P +  
Sbjct:   540 ADKVV--GEYEKS---PCMIYLDSLFKRPGQFANKLRKYLTLEWKNKKA-VDGVTPLREF 593

Query:   513 RLQFAPLE---LPQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPP 568
                  P     LP Q N  DCG++LLHY+ELF KE  ++F  PL++          WF  
Sbjct:   594 NQDNFPYHISHLPLQNNGSDCGVYLLHYLELFCKEPETSFKKPLERP--------GWFSA 645

Query:   569 AEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDE 602
             + +  KR +IKKL+YEI      R+ P+A S++E
Sbjct:   646 SAIHRKRREIKKLIYEIRS----RQYPNARSLEE 675
GO:0008234 "cysteine-type peptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
TAIR|locus:2195598 ULP1D "UB-like protease 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0030420 CG12717 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2194574 OTS2 "OVERLY TOLERANT TO SALT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-345 si:dkey-100n23.3 "si:dkey-100n23.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|I3LCP9 SENP6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBJ2 SENP7 "Sentrin-specific protease 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289557 DDB_G0289557 "peptidase C48 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|J9NV48 SENP7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LG40 SENP7 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691
3rd Layer3.4.22.68LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00070310
hypothetical protein (871 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query906
COG5160578 COG5160, ULP1, Protease, Ulp1 family [Posttranslat 3e-34
pfam02902216 pfam02902, Peptidase_C48, Ulp1 protease family, C- 4e-28
PLN03189490 PLN03189, PLN03189, Protease specific for SMALL UB 5e-16
>gnl|CDD|227489 COG5160, ULP1, Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  138 bits (350), Expect = 3e-34
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 50/257 (19%)

Query: 300 WNTVDFDSK-----YEENSL------LSQKSRLPSKCCSIEFDEP--FEDVVYPKDDPDA 346
                  S         N        L+    +P +    +F  P   +   YP +D  +
Sbjct: 321 NGEETLQSHAVSELRRSNRFKKGSDPLNFNDNVPFRDAKTDFQTPSCLKSSCYPFNDRSS 380

Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQ-TDRQQDFHFFNSFFFRKLADLDKDP 405
           + I+ +D K L    ++NDTIIDFY+K L+   + T +++  H FN+FF+ KL+      
Sbjct: 381 IEITNQDFKRLRNGDWLNDTIIDFYMKLLSKISKNTSKREQVHLFNTFFYTKLS------ 434

Query: 406 SSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKS 465
                 R  +  VR+WT+K ++F K YIFIP+N S HW L +I                 
Sbjct: 435 ------RRGYSGVRRWTKKTDIFSKKYIFIPINISYHWFLAIID---------------- 472

Query: 466 LKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQ 525
                IL+ DS+  +H  +   ++ YL +E+K +H              +    ++PQQ+
Sbjct: 473 NPKKNILYFDSLANTHDPVLEFLRSYLLDEYKIQHDKDPQI--------KMKHCKVPQQR 524

Query: 526 NSFDCGLFLLHYVELFL 542
           N  DCG+F+  ++  FL
Sbjct: 525 NGSDCGVFVCMFIRYFL 541

Length = 578
>gnl|CDD|217278 pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal catalytic domain Back     alignment and domain information
>gnl|CDD|215622 PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 906
PLN03189490 Protease specific for SMALL UBIQUITIN-RELATED MODI 100.0
KOG0778511 consensus Protease, Ulp1 family [Posttranslational 100.0
COG5160578 ULP1 Protease, Ulp1 family [Posttranslational modi 100.0
PF02902216 Peptidase_C48: Ulp1 protease family, C-terminal ca 99.96
KOG3246223 consensus Sentrin-specific cysteine protease (Ulp1 99.94
KOG0779595 consensus Protease, Ulp1 family [Posttranslational 99.85
KOG0779595 consensus Protease, Ulp1 family [Posttranslational 95.99
PRK14848317 deubiquitinase SseL; Provisional 94.97
PF03290423 Peptidase_C57: Vaccinia virus I7 processing peptid 94.97
PRK11836403 deubiquitinase; Provisional 92.95
>PLN03189 Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-40  Score=368.75  Aligned_cols=258  Identities=22%  Similarity=0.458  Sum_probs=196.6

Q ss_pred             cCchhhhhhhccccccccccccccccCcchhhhhhhccccC--------CCCCccccCCCcccccc----ccCC------
Q 002578          280 QHWPERLNKIISLDVRYKERWNTVDFDSKYEENSLLSQKSR--------LPSKCCSIEFDEPFEDV----VYPK------  341 (906)
Q Consensus       280 ~~~~~~~e~i~s~~~R~~~~~~~v~~d~d~e~~~~~~~~~~--------~p~k~~~~~~de~~e~~----vYP~------  341 (906)
                      |.|.+..+.....+.|++++.-.+.+..  ...+.+++...        .+..++.| |.++|+..    ..+.      
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p-LT~e~~~~V~~al~~~~~~~vl  280 (490)
T PLN03189        204 EAYRKLLQSAERRNSKLKDLGFEIELNE--KRLSSLRQSRPKPKEPVEEVPREPFIP-LTREEETEVKRAFSANNRRKVL  280 (490)
T ss_pred             HHHHHHHHHHHhhcchhhhccceeehhh--hHHHHHhhhccCccccccccccccCcC-CCHHHHHHHHHHhcCCCcccee
Confidence            4677777777788899988876665532  22334443332        22234444 44444432    2221      


Q ss_pred             --CCCCceEEehhhhcccCCCCccCHHHHHHHHHHHHhhcccC--CCCcEEEechHHHHHhhccCCCCCchhhhhhHHHH
Q 002578          342 --DDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTD--RQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQR  417 (906)
Q Consensus       342 --~~~~~IsLt~sDL~~L~pgeWLND~IInFYLeyL~~~l~~e--~~~rvhfFNSFFysKL~~~~k~Pss~~~~~~~yqr  417 (906)
                        ..+.+++||++||.||.|++||||+|||||+++|.++...+  ...++|+||||||++|....        ...+|++
T Consensus       281 vs~~~~~i~IT~~DL~~L~Pg~WLNDeVINfYm~LL~er~~~~p~~~~k~h~FNTFFytkL~~~~--------~~ygY~~  352 (490)
T PLN03189        281 VTHENSNIDITGEILRCLKPGAWLNDEVINLYLELLKEREAREPKKFLKCHFFNTFFYKKLVSGK--------SGYDYKA  352 (490)
T ss_pred             eecCCCceEEEHHHhhccCCCCccCHHHHHHHHHHHHHhhhcCcccccceEEEehHHHHHHhhcC--------CcCChHH
Confidence              23568999999999999999999999999999998764322  34689999999999998631        1247999


Q ss_pred             HHhhhhc----ccccCCceEEEEeecCCcEEEEEEecCCCCCccchhhhhhccCCCeEEEEcCCCCCchhhHHHHHHHHH
Q 002578          418 VRKWTRK----VNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLS  493 (906)
Q Consensus       418 VkrWTKk----vDLFeKDyIFIPIN~~sHWsLvVIc~P~~v~~~~D~ei~~~~K~p~Il~LDSL~gs~~~l~~~Ir~YL~  493 (906)
                      |+|||++    ++||++|+||||||.+.||+|+||+++.                ++|.|||||++.+..+.+.|+.||.
T Consensus       353 VrRWTk~kKigv~Lfs~D~IFIPIh~n~HWsLaVId~k~----------------k~I~yyDSLgg~~~~vL~~L~rYL~  416 (490)
T PLN03189        353 VRRWTTQKKLGYHLIDCDKIFVPIHQEIHWTLAVINKKD----------------QKFQYLDSLKGRDPKILDALAKYYV  416 (490)
T ss_pred             HHHHhhhcccccccccCceEEeeeecCCeeEEEEEEcCC----------------CeEEEEeCCCCCCHHHHHHHHHHHH
Confidence            9999974    5799999999999999999999999874                4899999999998888999999999


Q ss_pred             HHHHHhcCCCCCCCCcccceeccccCCCCCcCCCCChHHHHHHHHHHHHccCccCCCccccccccccccCCCCChhHhHH
Q 002578          494 EEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSM  573 (906)
Q Consensus       494 ~E~k~K~~~~~Dd~sskf~~lr~v~~~VPQQ~Ng~DCGVFVL~YaE~fl~~~Pi~Fsp~~i~~~s~fL~~nWFpp~dIs~  573 (906)
                      .|++.+++...+.  +.|..  ....++|||.||+|||||||+||++|.++.++.|                 ++.++..
T Consensus       417 ~E~kdK~g~d~D~--s~W~~--~~~~~vPQQ~NG~DCGVFVL~yAE~~SrG~~LtF-----------------SQeDMp~  475 (490)
T PLN03189        417 DEVKDKSEKDIDV--SSWEQ--EFVEDLPEQKNGYDCGMFMIKYIDFYSRGLGLCF-----------------GQEHMPY  475 (490)
T ss_pred             HHHhhhcCCCcch--hccee--ccCCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCc-----------------ChhhhHH
Confidence            9999887654431  33431  1235899999999999999999999999876554                 5567888


Q ss_pred             HHHHHHHHHHHH
Q 002578          574 KRAQIKKLLYEI  585 (906)
Q Consensus       574 kR~~IrkLIleL  585 (906)
                      +|.+|..-|+++
T Consensus       476 fRrRma~EIl~~  487 (490)
T PLN03189        476 FRLRTAKEILRL  487 (490)
T ss_pred             HHHHHHHHHHHh
Confidence            999998888765

>KOG0778 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5160 ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02902 Peptidase_C48: Ulp1 protease family, C-terminal catalytic domain This family belongs to family C48 of the peptidase classification Back     alignment and domain information
>KOG3246 consensus Sentrin-specific cysteine protease (Ulp1 family) [General function prediction only] Back     alignment and domain information
>KOG0779 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0779 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14848 deubiquitinase SseL; Provisional Back     alignment and domain information
>PF03290 Peptidase_C57: Vaccinia virus I7 processing peptidase; InterPro: IPR004970 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK11836 deubiquitinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query906
3eay_A323 Crystal Structure Of The Human Senp7 Catalytic Doma 2e-25
1tgz_A226 Structure Of Human Senp2 In Complex With Sumo-1 Len 4e-13
2io0_A232 Crystal Structure Of Human Senp2 In Complex With Pr 5e-12
2xph_A238 Crystal Structure Of Human Senp1 With The Bound Cob 1e-10
2xre_A230 Detection Of Cobalt In Previously Unassigned Human 2e-10
2iyc_A226 Senp1 Native Structure Length = 226 3e-10
2ckg_A225 The Structure Of Senp1 Sumo-2 Co-Complex Suggests A 3e-10
2iy0_A226 Senp1 (Mutant) Sumo1 Rangap Length = 226 4e-09
2g4d_A205 Crystal Structure Of Human Senp1 Mutant (C603s) In 1e-08
1euv_A221 X-Ray Structure Of The C-Terminal Ulp1 Protease Dom 1e-07
2hkp_A221 Sumo Protease Ulp1 With The Catalytic Cysteine Oxid 2e-06
2bkq_A212 Nedd8 Protease Length = 212 2e-04
1xt9_A212 Crystal Structure Of Den1 In Complex With Nedd8 Len 2e-04
>pdb|3EAY|A Chain A, Crystal Structure Of The Human Senp7 Catalytic Domain Length = 323 Back     alignment and structure 
Iteration: 1

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 138/305 (45%), Gaps = 69/305 (22%)
Query: 337 VVYPKDDPDAVL-ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDXXXXXXX-- 393
           +VYP       L ++  D++ LE   F+ND IIDFY+KYL  +  +D   +         
Sbjct: 22  IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 81
Query: 394 ---XXRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICH 450
                RK  +L +D  +    +   +RVR WTR +N+F KDYIF+PVN S HW L VIC 
Sbjct: 82  YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 141
Query: 451 PG-EVPYFRD------------------DEIEKSLKV----------------------- 468
           P  E   + D                    I+  L+                        
Sbjct: 142 PWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKK 201
Query: 469 ----PCILHMDSIKGSHRGLKNLIQG---YLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
               PCIL +DS+K +   ++N +Q    YL  EW E    T  +  SK   +   P ++
Sbjct: 202 MCKRPCILILDSLKAA--SVQNTVQNLREYLEVEW-EVKLKTHRQF-SKTNMVDLCP-KV 256
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
           P+Q NS DCG++LL YVE F K+ + NF  P+  ++        WFP   +  KR  I++
Sbjct: 257 PKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 308
Query: 581 LLYEI 585
           L+ ++
Sbjct: 309 LILKL 313
>pdb|1TGZ|A Chain A, Structure Of Human Senp2 In Complex With Sumo-1 Length = 226 Back     alignment and structure
>pdb|2IO0|A Chain A, Crystal Structure Of Human Senp2 In Complex With Presumo-2 Length = 232 Back     alignment and structure
>pdb|2XPH|A Chain A, Crystal Structure Of Human Senp1 With The Bound Cobalt Length = 238 Back     alignment and structure
>pdb|2XRE|A Chain A, Detection Of Cobalt In Previously Unassigned Human Senp1 Structure Length = 230 Back     alignment and structure
>pdb|2IYC|A Chain A, Senp1 Native Structure Length = 226 Back     alignment and structure
>pdb|2CKG|A Chain A, The Structure Of Senp1 Sumo-2 Co-Complex Suggests A Structural Basis For Discrimination Between Sumo Paralogues During Processing Length = 225 Back     alignment and structure
>pdb|2IY0|A Chain A, Senp1 (Mutant) Sumo1 Rangap Length = 226 Back     alignment and structure
>pdb|2G4D|A Chain A, Crystal Structure Of Human Senp1 Mutant (C603s) In Complex With Sumo-1 Length = 205 Back     alignment and structure
>pdb|1EUV|A Chain A, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In Complex With Smt3, The Yeast Ortholog Of Sumo Length = 221 Back     alignment and structure
>pdb|2HKP|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To A Sulfenic Acid Length = 221 Back     alignment and structure
>pdb|2BKQ|A Chain A, Nedd8 Protease Length = 212 Back     alignment and structure
>pdb|1XT9|A Chain A, Crystal Structure Of Den1 In Complex With Nedd8 Length = 212 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query906
3eay_A323 Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq 3e-44
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 7e-40
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 2e-36
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 1e-35
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 1e-33
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 8e-25
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Length = 323 Back     alignment and structure
 Score =  162 bits (409), Expect = 3e-44
 Identities = 86/314 (27%), Positives = 133/314 (42%), Gaps = 63/314 (20%)

Query: 331 DEPFEDVVYP-KDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDF-H 388
               + +VYP       + ++  D++ LE   F+ND IIDFY+KYL  +  +D   +  H
Sbjct: 16  GLVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSH 75

Query: 389 FFNSFFFRKL----ADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWS 444
            F+SFF++ L     +L +D  +    +   +RVR WTR +N+F KDYIF+PVN S HW 
Sbjct: 76  IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWY 135

Query: 445 LIVICHPGEVPYFRDDEIEKS--------------------------------------- 465
           L VIC P       +D  +                                         
Sbjct: 136 LAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESN 195

Query: 466 -------LKVPCILHMDSIKGSHR-GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFA 517
                   K PCIL +DS+K +        ++ YL  EW+ +         +        
Sbjct: 196 MSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNM---VDL 252

Query: 518 PLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQ 577
             ++P+Q NS DCG++LL YVE F K+ + NF               WFP   +  KR  
Sbjct: 253 CPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFE-------LPIHLEKWFPRHVIKTKRED 305

Query: 578 IKKLLYEISKDHSR 591
           I++L+ ++     +
Sbjct: 306 IRELILKLHLQQQK 319
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Length = 238 Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Length = 212 Back     alignment and structure
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Length = 226 Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Length = 221 Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Length = 186 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 906
d2bkra1212 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SEN 3e-38
d1th0a_226 d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {H 1e-36
d2iy1a1225 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {H 6e-35
d1euva_221 d.3.1.7 (A:) Ulp1 protease C-terminal domain {Bake 2e-27
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Sentrin-specific protease 8, SENP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (352), Expect = 3e-38
 Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 40/241 (16%)

Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPS 406
            L+ + DV LL+P +++ND II F  +Y  N    D      F +    + +        
Sbjct: 11  SLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDSSDHVSFISPEVTQFIKCTSN--- 67

Query: 407 SACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSL 466
                      +  +   ++L  K  +F+ +N + + +         V            
Sbjct: 68  --------PAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGSHWSLLVYLQDK------- 112

Query: 467 KVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQN 526
                 H DS   S+      +   L      +             +L F   + P QQN
Sbjct: 113 --NSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGD-----------KLAFVEEKAPAQQN 159

Query: 527 SFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEIS 586
           S+DCG++++   E   +                        PA ++ KR + K L+  ++
Sbjct: 160 SYDCGMYVICNTEALCQNFFRQQ---------TESLLQLLTPAYITKKRGEWKDLIATLA 210

Query: 587 K 587
           K
Sbjct: 211 K 211
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 226 Back     information, alignment and structure
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 225 Back     information, alignment and structure
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query906
d1th0a_226 Sentrin-specific protease 2, SENP2 {Human (Homo sa 100.0
d2iy1a1225 Sentrin-specific protease 1 {Human (Homo sapiens) 100.0
d2bkra1212 Sentrin-specific protease 8, SENP8 {Human (Homo sa 100.0
d1euva_221 Ulp1 protease C-terminal domain {Baker's yeast (Sa 100.0
d1nlna_203 Human adenovirus 2 proteinase, adenain {Mastadenov 80.27
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Sentrin-specific protease 2, SENP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=270.28  Aligned_cols=192  Identities=27%  Similarity=0.570  Sum_probs=161.5

Q ss_pred             CCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             95389441230249998647999999999999540368899689960488998411379998401224678999965411
Q 002578          345 DAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRK  424 (906)
Q Consensus       345 ~~VsIt~sDL~~L~p~eWLNDtIIDFYLeyL~e~i~~~~~~rvhiFNSFFysKL~~ldk~Pss~~~g~~~yqrVkrWTKk  424 (906)
                      .++.|+++|+.+|.+++||||+|||||+++|.++..+....++++|+|+|+.+|..            .++..+++|+++
T Consensus        30 ~~~~i~~~Dl~~L~~~~WLnD~iI~~y~~~l~~~~~~~~~~~~~~~~~~f~~~l~~------------~~~~~~~~~~~~   97 (226)
T d1th0a_          30 FKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKS------------GGYQAVKRWTKG   97 (226)
T ss_dssp             TTEEEEHHHHGGGSTTCCCCHHHHHHHHHHHHHHHHHHTCCCEEECCTTHHHHHHH------------HTGGGTGGGGTT
T ss_pred             CCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH------------CCHHHHHHHHHC
T ss_conf             79636799997547986366499999999999864440578468866799998830------------268999999724


Q ss_pred             CCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             34567766999831488479999945999876550234210477729998189987502689999999999998428999
Q 002578          425 VNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTD  504 (906)
Q Consensus       425 vDLFeKD~IFIPIN~~sHWSLIVId~P~~v~~f~D~e~e~s~k~p~Il~LDSL~gsn~~i~~~Ir~YL~eE~k~K~~~~~  504 (906)
                      .+++++++||||||.++||+|+||+.+.                ++|++||||++.+......++.||..+++.+.....
T Consensus        98 ~~l~~~~~i~iPin~~~HW~L~vi~~~~----------------~~i~~~DSl~~~~~~~~~~i~~~l~~~~~~~~~~~~  161 (226)
T d1th0a_          98 VNLFEQEIILVPIHRKVHWSLVVIDLRK----------------KCLKYLDSMGQKGHRICEILLQYLQDESKTKRNSDL  161 (226)
T ss_dssp             CCGGGSSEEEEEEEETTEEEEEEEETTT----------------TEEEEECTTCCCCHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred             CCCCCCCEEEEEEECCCCEEEEEEEECC----------------CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             5754488789958768853899997335----------------247884266677768999999999999998637876


Q ss_pred             CCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9987654000002599887679997199999999999816746878321111222233797784676899999999999
Q 002578          505 DEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLY  583 (906)
Q Consensus       505 dd~sskf~~lrvv~~nVPQQ~Ng~DCGIFVL~YaE~fl~~~Pi~Fsq~~i~~~s~fl~~nWFpp~eIs~kR~~IkkLIl  583 (906)
                      ..  ..|....+.+..+|||.||+|||+|||+||++++.+.+..                 |++.++...|..|..-|+
T Consensus       162 ~~--~~~~~~~~~~~~~pqQ~N~~DCGvfvl~~~~~~~~~~~~~-----------------~tq~di~~~R~~i~~el~  221 (226)
T d1th0a_         162 NL--LEWTHHSMKPHEIPQQLNGSDCGMFTCKYADYISRDKPIT-----------------FTQHQMPLFRKKMVWEIL  221 (226)
T ss_dssp             CG--GGCEEEECCTTTSCCCCSSSCHHHHHHHHHHHHTTTCCCC-----------------CCGGGHHHHHHHHHHHHH
T ss_pred             CC--CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-----------------CCHHHHHHHHHHHHHHHH
T ss_conf             73--3232333115778879999877999999999996799988-----------------398899999999999999
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]} Back     information, alignment and structure