Citrus Sinensis ID: 002581
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 905 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGH2 | 1032 | Probable LRR receptor-lik | yes | no | 0.785 | 0.688 | 0.529 | 0.0 | |
| C0LGH3 | 1033 | Probable LRR receptor-lik | no | no | 0.785 | 0.688 | 0.529 | 0.0 | |
| C0LGG8 | 1038 | Probable LRR receptor-lik | no | no | 0.753 | 0.657 | 0.403 | 1e-142 | |
| C0LGG9 | 1035 | Probable LRR receptor-lik | no | no | 0.753 | 0.658 | 0.391 | 1e-140 | |
| C0LGE0 | 1014 | Probable LRR receptor-lik | no | no | 0.755 | 0.674 | 0.403 | 1e-135 | |
| C0LGG7 | 953 | Probable LRR receptor-lik | no | no | 0.674 | 0.640 | 0.386 | 1e-118 | |
| Q9FXF2 | 1021 | Probable LRR receptor-lik | no | no | 0.753 | 0.667 | 0.372 | 1e-117 | |
| C0LGN2 | 1020 | Probable leucine-rich rep | no | no | 0.750 | 0.665 | 0.368 | 1e-116 | |
| Q9ASQ6 | 1019 | Probable LRR receptor-lik | no | no | 0.744 | 0.661 | 0.376 | 1e-116 | |
| C0LGU1 | 959 | Probable LRR receptor-lik | no | no | 0.657 | 0.620 | 0.292 | 5e-46 |
| >sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2 | Back alignment and function desciption |
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Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/722 (52%), Positives = 504/722 (69%), Gaps = 11/722 (1%)
Query: 4 WDAPAVRLWNISGNPCSGSALNATDSAFES-PDNNPAIVCDCTFDNGATCHITKLRVYAL 62
W A R WNISG CSG+A++A S +S P NP I CDC+F N C IT ++VYA+
Sbjct: 52 WKIQAPREWNISGELCSGAAIDA--SVLDSNPAYNPLIKCDCSFQNSTICRITNIKVYAI 109
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122
+ G IP EL TL YLT L + +N TG LP IGNL+R+ ++ N SGPVP+E+G
Sbjct: 110 DVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGL 169
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L +L LL +++NNFSG++P EIG KL+++YIDS G SG IP +FA L ++ +D
Sbjct: 170 LTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIPLSFANLVQLEQAWIADL 229
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242
T +IPDFIG+WTKLT LR+ G GPIPSS S L SL LR+ DI SSSLDF+
Sbjct: 230 EVTDQIPDFIGDWTKLTTLRIIGTGLSGPIPSSFSNLTSLTELRLGDISSGSSSLDFIKD 289
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
+K+L L LRN +TGTIPS IGE +L+ +DLSFN L G IP +LFN+ L +LFLGNN
Sbjct: 290 MKSLSVLVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNN 349
Query: 303 SLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT-SSLQMNLAVNNFTFDGSNISVFPGLQ 361
+L+G+ PTQK+++L+N+D+SYN LSG PSWV+ SL++NL NNFT +G + V PGL
Sbjct: 350 TLNGSFPTQKTQSLRNVDVSYNDLSGSLPSWVSLPSLKLNLVANNFTLEGLDNRVLPGLN 409
Query: 362 CLQRNFPCNRNAPRYANFSIKCGGPQMRA-DNIVYEADNSSLSASSYVVTSTEKWAVSNV 420
CLQ+NFPCNR Y++FSI CGGP+ R+ ++E ++ +S+ V++ ++WA S+V
Sbjct: 410 CLQKNFPCNRGKGIYSDFSINCGGPEKRSVTGALFEREDEDFGPASFFVSAGQRWAASSV 469
Query: 421 GLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETS 480
GLF N Y+ + +Q T EL+Q++R++ S+RYYGLGLENG Y V+L FAE
Sbjct: 470 GLFAGSSNNIYIATSQSQFVNTLDSELFQSARLSASSVRYYGLGLENGGYTVTLQFAEIQ 529
Query: 481 ILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPN-RAIIKNFNAAVSENHLEIH 539
IL ++ W+ LG R FDIY+QG L KDFD+ + AG RA+ + + A VSENHLE+H
Sbjct: 530 ILGSTSTTWKGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQRVYKANVSENHLEVH 589
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGI 599
L WAGKGTCC+P QG YGP ISA+SA F P+V+ PP KN TG IVG+ V +G+
Sbjct: 590 LFWAGKGTCCIPIQGAYGPLISAVSATPDFTPTVANKPPSK--GKNRTGTIVGVIVGVGL 647
Query: 600 LGLIVISIVFYM--RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYG 657
L ++ ++F + RRK+ DDEE L+G++ KP F+Y+EL+SAT+DFDPSNKLGEGG+G
Sbjct: 648 LSILAGVVMFTIRKRRKRYTDDEE-LLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFG 706
Query: 658 PVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717
PVYKG L+DGRV+AVK LS+ S QGK QFV EI IS+V HRNLV+LYGCC EG R+LV
Sbjct: 707 PVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLV 766
Query: 718 YD 719
Y+
Sbjct: 767 YE 768
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/722 (52%), Positives = 505/722 (69%), Gaps = 11/722 (1%)
Query: 4 WDAPAVRLWNISGNPCSGSALNATDSAFES-PDNNPAIVCDCTFDNGATCHITKLRVYAL 62
W A R WNISG CSG+A++A S +S P NP I CDC+F+N C IT ++VYA+
Sbjct: 51 WRIRAPREWNISGELCSGAAIDA--SVLDSNPAYNPLIKCDCSFENSTICRITNIKVYAM 108
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122
G IP++L TL+YLT L + +N TG LP +GNL+R+ ++ N SGP+P+E+G
Sbjct: 109 EVVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGL 168
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L +L LLS+++NNFSG++P EIG KL+++YIDS G SG +P +FA L ++ +D
Sbjct: 169 LTDLRLLSISSNNFSGSIPDEIGRCTKLQQIYIDSSGLSGGLPVSFANLVELEQAWIADM 228
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242
TG+IPDFIG+WTKLT LR+ G GPIP+S S L SL LR+ DI +SSL+F+
Sbjct: 229 ELTGQIPDFIGDWTKLTTLRILGTGLSGPIPASFSNLTSLTELRLGDISNGNSSLEFIKD 288
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
+K+L L LRN +TGTIPS IGE +L+ LDLSFN L G IP +LFN+ L +LFLGNN
Sbjct: 289 MKSLSILVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNN 348
Query: 303 SLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT-SSLQMNLAVNNFTFDGSNISVFPGLQ 361
+L+G+LPTQK ++L N+D+SYN LSG PSWV+ +L +NL NNFT +G + V GL
Sbjct: 349 TLNGSLPTQKGQSLSNVDVSYNDLSGSLPSWVSLPNLNLNLVANNFTLEGLDNRVLSGLN 408
Query: 362 CLQRNFPCNRNAPRYANFSIKCGGPQMRA-DNIVYEADNSSLSASSYVVTSTEKWAVSNV 420
CLQ+NFPCNR Y++FSI CGGP++R+ V+E ++ L +S+VV++ ++WA S+V
Sbjct: 409 CLQKNFPCNRGKGIYSDFSINCGGPEIRSVTEAVFEREDEDLGPASFVVSAGQRWAASSV 468
Query: 421 GLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETS 480
GLF N Y+ + +Q T EL+Q++R++ SLRYYGLGLENG Y V+L FAE
Sbjct: 469 GLFAGSSNNIYISTSQSQFVNTLDSELFQSARLSASSLRYYGLGLENGGYTVTLQFAEIQ 528
Query: 481 ILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPN-RAIIKNFNAAVSENHLEIH 539
IL ++ W LG R FDIY+QG L KDFD+ + AG RA+ + + A VS+NHLEIH
Sbjct: 529 ILGSTSNTWRGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQREYKANVSQNHLEIH 588
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGI 599
L WAGKGTCC+P QG YGP ISA+ A F P+V PP K+ TG IVG+ V +G+
Sbjct: 589 LFWAGKGTCCIPIQGAYGPLISAVGATPDFTPTVGNRPPSK--GKSMTGTIVGVIVGVGL 646
Query: 600 LGLIVISIVFYM--RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYG 657
L +I ++F + RRK+ DDEE+L ++ KP TF+Y+EL+SAT+DFDPSNKLGEGG+G
Sbjct: 647 LSIISGVVIFIIRKRRKRYTDDEEIL-SMDVKPYTFTYSELKSATQDFDPSNKLGEGGFG 705
Query: 658 PVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717
PVYKG L+DGR +AVK LS+ S QGK QFV EI ISAVQHRNLV+LYGCC EG RLLV
Sbjct: 706 PVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLV 765
Query: 718 YD 719
Y+
Sbjct: 766 YE 767
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 289/717 (40%), Positives = 424/717 (59%), Gaps = 35/717 (4%)
Query: 13 NISGNPCSGSALN-ATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEE 71
NI CS N +SA SP +N I CDCTF+ + C +T +++ + + G+ P E
Sbjct: 52 NIERTSCSDQNWNFVVESASNSPTSN--ITCDCTFNASSVCRVTNIQLKSFSLPGIFPPE 109
Query: 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131
L L + + RNF G +P+ + + L +LS+ N SGP P +LG++ L ++L
Sbjct: 110 FGNLTRLREIDLSRNFLNGTIPTTLSQIP-LEILSVIGNRLSGPFPPQLGDITTLTDVNL 168
Query: 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDF 191
N F+G LP +GNL L+EL + + +G+IP + + L N+ R +GKIPDF
Sbjct: 169 ETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIPDF 228
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS-SLDFVMSLKNLKDLS 250
IGNWT L L LQG S +GPIP S+S L +L LRI+D+ ++ S + +L +K L
Sbjct: 229 IGNWTLLERLDLQGTSMEGPIPPSISNLTNLTELRITDLRGQAAFSFPDLRNLMKMKRLV 288
Query: 251 LRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
LRN LI G IP IG + L+TLDLS N LTG IP T N+D+ N++FL NNSL+G +P
Sbjct: 289 LRNCLIRGPIPEYIGSMSELKTLDLSSNMLTGVIPDTFRNLDAFNFMFLNNNSLTGPVPQ 348
Query: 311 QKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQ------CLQ 364
+ +N+DLS N+ + P P+ + L +NL IS +P + CL+
Sbjct: 349 FIINSKENLDLSDNNFTQP-PTLSCNQLDVNL-----------ISSYPSVTDNSVQWCLR 396
Query: 365 RNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNVGLFN 424
PC +A + + F I CGG +++ Y D +S S++ S E+W S+ G++
Sbjct: 397 EGLPCPEDAKQSSLF-INCGGSRLKIGKDTYTDDLNSRGQSTFSSVS-ERWGYSSSGVWL 454
Query: 425 EKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDR 484
KE+ Y+ + TPE Y+T+R++P SL+YYGL L G YK+ L FAE I+
Sbjct: 455 GKEDAGYLATDRFNLINGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAE--IMFS 512
Query: 485 STERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAA-VSENHLEIHLLWA 543
+ + + SLG R+FDIY+QG L +DF+I++ AGG + I+ + V+ + LEIHL W
Sbjct: 513 NDQTFNSLGRRIFDIYVQGNLLERDFNIAERAGGVGKPFIRQIDGVQVNGSTLEIHLQWT 572
Query: 544 GKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTP-GNKNHTGMIVGIAVPLGILGL 602
GKGT +PT+G YGP ISA++ FK + G P N G+++ G+L L
Sbjct: 573 GKGTNVIPTRGVYGPLISAITITPNFK-----VDTGKPLSNGAVAGIVIAACAVFGLLVL 627
Query: 603 IVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKG 662
+++ + Y+ K+ +++EE L G++ + +F+ +++ AT +FDP NK+GEGG+GPVYKG
Sbjct: 628 VILRLTGYLGGKEVDENEE-LRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKG 686
Query: 663 TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L+DG IAVKQLS S QG +FV EI ISA+QH NLV+LYGCCIEG LLVY+
Sbjct: 687 VLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYE 743
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGG9|Y5344_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/717 (39%), Positives = 422/717 (58%), Gaps = 35/717 (4%)
Query: 13 NISGNPCSGSALN-ATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEE 71
NI C N +S + P +N I CDCTF+ + C +T +++ N +G+IP E
Sbjct: 50 NIERTSCLDRKWNFVAESTSKLPTSN--ITCDCTFNASSVCRVTNIQLRGFNLRGIIPPE 107
Query: 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131
L LT + + NF +G +P+ + + L +L++ N SGP P +LG + L + +
Sbjct: 108 FGNLTRLTEIDLVLNFLSGTIPTTLSQIP-LEILAVTGNRLSGPFPPQLGQITTLTDVIM 166
Query: 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDF 191
+N F+G LPP +GNL L+ L I S +G IP + + L N+ R +GKIPDF
Sbjct: 167 ESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDF 226
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL 251
IGNWT+L L LQG S +GPIP+S+S L +L LRI+D+ +S + ++ N++ L L
Sbjct: 227 IGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVL 286
Query: 252 RNALITGTIPSGIG-ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
RN LI IP IG + L+ LDLS N L G IP T ++++ N+++L NNSL+G +P
Sbjct: 287 RNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVPQ 346
Query: 311 QKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQ------CLQ 364
++ QNIDLSYN+ + P P+ + L +NL IS +P + CL+
Sbjct: 347 FILDSKQNIDLSYNNFTQP-PTLSCNQLDVNL-----------ISSYPSVTNNSVQWCLR 394
Query: 365 RNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNVGLFN 424
++ PC +A +++ I CGG +++ D Y D + AS++ S E+W S+ G +
Sbjct: 395 KDLPCPGDA-HHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVS-ERWGYSSSGAWL 452
Query: 425 EKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDR 484
+ Y+ + TPE Y+T+R+ SL+YYGL + G YKV L FAE I+
Sbjct: 453 GNDGATYLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAE--IMFS 510
Query: 485 STERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFN-AAVSENHLEIHLLWA 543
+ + + SLG R+FDIY+QG L +DF+I++ AGG + ++ + V+ + LEIHL W
Sbjct: 511 NDQTYSSLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWT 570
Query: 544 GKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTP-GNKNHTGMIVGIAVPLGILGL 602
GKGT +PT+G YGP ISA++ FK + G P N G+++ V G+L L
Sbjct: 571 GKGTNVIPTRGVYGPLISAITVTPNFK-----VDTGKPLSNGVVAGIVIAACVAFGLLVL 625
Query: 603 IVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKG 662
+++ + Y+ K+ +++EE L G++ + +F+ +++ AT +FDP NK+GEGG+GPVYKG
Sbjct: 626 VILRLTGYLGGKEVDENEE-LRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKG 684
Query: 663 TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L+DG IAVKQLS S QG +FV EI ISA+QH NLV+LYGCCIEG LLVY+
Sbjct: 685 VLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYE 741
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 293/727 (40%), Positives = 427/727 (58%), Gaps = 43/727 (5%)
Query: 12 WNISGNPCSGSAL----NATDSAFESPDNNPAIVCDCTF-DNGATCHITKLRVYALNKKG 66
W+ + +PCSG T FES I CDC+F ++CH+ ++ + + N G
Sbjct: 50 WDFNKDPCSGEGTWIVTTYTTKGFES-----NITCDCSFLPQNSSCHVIRIALKSQNLTG 104
Query: 67 VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKEL 126
++P E L++L L + RN TG +P ++ RL LS N SGP P+ L L L
Sbjct: 105 IVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASM-RLEDLSFMGNRLSGPFPKVLTRLTML 163
Query: 127 NLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG 186
LSL N FSG +PP+IG L LE+L++ S +G + L N+ +R SD +FTG
Sbjct: 164 RNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTGPLTEKLGLLKNLTDMRISDNNFTG 223
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNL 246
IPDFI NWT++ L++ G GPIPSS+S L SL LRISD+ SS + +L+++
Sbjct: 224 PIPDFISNWTRILKLQMHGCGLDGPIPSSISSLTSLTDLRISDLGGKPSSFPPLKNLESI 283
Query: 247 KDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306
K L LR I G IP IG+L+ L+TLDLSFN L+G+IP + N+ ++++L N L+G
Sbjct: 284 KTLILRKCKIIGPIPKYIGDLKKLKTLDLSFNLLSGEIPSSFENMKKADFIYLTGNKLTG 343
Query: 307 TLPTQKSENLQNIDLSYNHLS--GPFPSW----VTSSLQMNLAVNNFTFDGSNISVFPGL 360
+P E +N+D+S+N+ + PS VTS+L + A+ N + GS
Sbjct: 344 GVPNYFVERNKNVDVSFNNFTDESSIPSHDCNRVTSNLVESFALGNKSHKGST------- 396
Query: 361 QCLQRNFPCNRNAPRYANFS--IKCGGPQMRADN-IVYEADNSSLSASSYVVTSTEKWAV 417
C + PC + RY + I CGG +++ D I Y+AD+ AS YV+ + ++WA+
Sbjct: 397 -CFLQRMPC-VHPKRYHLYKLYINCGGGEVKVDKEITYQADDEPKGASMYVLGANKRWAL 454
Query: 418 SNVGLFNEKENPA---YVLNTLAQMTGTRTPE--LYQTSRITPGSLRYYGLGLENGPYKV 472
S+ G F + ++ A V NT +P LY+T+R++P SL YYG+ L NG Y V
Sbjct: 455 SSTGNFMDNDDDADEYTVQNTSRLSVNASSPSFGLYRTARVSPLSLTYYGICLGNGNYTV 514
Query: 473 SLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVS 532
+L FAE D +T SLG R+FDIY+Q L K+F+I + A G + IIK+F V+
Sbjct: 515 NLHFAEIIFTDDNT--LYSLGKRLFDIYVQDQLVIKNFNIQEAARGSGKPIIKSFLVNVT 572
Query: 533 ENHLEIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVG 592
++ L+I L WAGKGT +P +G YGP ISA+S FKP V + + VG
Sbjct: 573 DHTLKIGLRWAGKGTTGIPIRGVYGPMISAISVEPNFKPPVY-------YDTKDIILKVG 625
Query: 593 IAVPLGILGLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLG 652
+ V L L +I VF+ +R+ ND ++ L G++ + TF+ ++++AT +FD + K+G
Sbjct: 626 VPVAAATLLLFIIVGVFWKKRRDKNDIDKELRGLDLQTGTFTLRQIKAATDNFDVTRKIG 685
Query: 653 EGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA 712
EGG+G VYKG LS+G++IAVKQLS S QG +FVNEI ISA+QH NLV+LYGCC+EG
Sbjct: 686 EGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGN 745
Query: 713 RRLLVYD 719
+ +LVY+
Sbjct: 746 QLILVYE 752
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 260/672 (38%), Positives = 370/672 (55%), Gaps = 62/672 (9%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122
N +G +P+ELV L L + + RN+ G +P G L + + L N +GP+P+E GN
Sbjct: 74 NLQGSLPKELVGLPLLQEIDLSRNYLNGSIPPEWGVLPLVNIWLLG-NRLTGPIPKEFGN 132
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
+ L L L N SG LP E+GNL ++++ + S +GEIPSTFAKL ++ R SD
Sbjct: 133 ITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDN 192
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242
+G IPDFI WTKL L +Q + GPIP +++ L L+ LRISD+ S + +
Sbjct: 193 QLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAIASLVELKDLRISDLNGPESPFPQLRN 252
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
+K ++ L LRN +TG +P +G++ + + LDLSFN L+G IP T N+ Y++ N
Sbjct: 253 IKKMETLILRNCNLTGDLPDYLGKITSFKFLDLSFNKLSGAIPNTYINLRDGGYIYFTGN 312
Query: 303 SLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSN-ISVFPGLQ 361
L+G++P IDLSY NNF+ D +N + + +
Sbjct: 313 MLNGSVPDWMVNKGYKIDLSY---------------------NNFSVDPTNAVCKYNNVL 351
Query: 362 CLQRNFPCNRNAPRYAN-FSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNV 420
RN+ C P+ N I CGG +M + +YE+D S Y S W +NV
Sbjct: 352 SCMRNYQC----PKTFNALHINCGGDEMSINGTIYESDKYDRLESWY--ESRNGWFSNNV 405
Query: 421 GLF-NEKENPAYV-LNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAE 478
G+F ++K P V + + + LY +RI+ SL YY L LENG Y V+L FAE
Sbjct: 406 GVFVDDKHVPERVTIESNSSELNVVDFGLYTQARISAISLTYYALCLENGNYNVNLHFAE 465
Query: 479 TSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEI 538
I+ ++SLG R FDIYIQ L KDF+I+KEA +IK F + + LEI
Sbjct: 466 --IMFNGNNNYQSLGRRFFDIYIQRKLEVKDFNIAKEAKDVGNVVIKTFPVEIKDGKLEI 523
Query: 539 HLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLG 598
L WAG+GT +P + YGP ISA+S S+ PS P N TG + + V
Sbjct: 524 RLYWAGRGTTVIPKERVYGPLISAISVDSSVNPS--------PRNGMSTGTLHTLVV--- 572
Query: 599 ILGLIVISIVF-------YMRRK----KDNDDEEVLVGIESKPNTFSYAELRSATKDFDP 647
IL + ++ +VF Y+R K KD E+++ +FS +++ AT +FD
Sbjct: 573 ILSIFIVFLVFGTLWKKGYLRSKSQMEKDFKSLELMIA------SFSLRQIKIATNNFDS 626
Query: 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
+N++GEGG+GPVYKG L DG +IAVKQLS S QG +F+NEI ISA+ H NLV+LYGC
Sbjct: 627 ANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGC 686
Query: 708 CIEGARRLLVYD 719
C+EG + LLVY+
Sbjct: 687 CVEGGQLLLVYE 698
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 270/724 (37%), Positives = 389/724 (53%), Gaps = 42/724 (5%)
Query: 10 RLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIP 69
+ W C + T++ P I C+C+ N CH+ K N G +P
Sbjct: 60 KFWKFDAENCKIEMVGLTETP--PPTAKQEIECECSPTNDTDCHVVKFAFKDHNLPGTLP 117
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
+ +V L YL + + N+ G LP + S LT +SL N SG +P+E GN L L
Sbjct: 118 Q-IVKLPYLREIDLAYNYINGTLPREWAS-SNLTFISLLVNRLSGEIPKEFGN-SSLTYL 174
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
L +N FSG +P E+GNL L++L + S +G +P++ A+L NM R +D +G IP
Sbjct: 175 DLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234
Query: 190 DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDL 249
+I NW +L L + + GPIPS +S L++L +LRISDI + ++ L +
Sbjct: 235 SYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNLRISDIRGPVQPFPSLKNVTGLTKI 294
Query: 250 SLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP 309
L+N I+G IP+ + L+ L+TLDLSFN L G IP + ++L ++ L N L G P
Sbjct: 295 ILKNCNISGQIPTYLSHLKELETLDLSFNKLVGGIP-SFAQAENLRFIILAGNMLEGDAP 353
Query: 310 TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNFPC 369
+ + +DLSYN+L P MNL +N F + S L C+ ++F C
Sbjct: 354 DELLRDGITVDLSYNNLKWQSPESRACRPNMNLNLNLFQSTSTKKSS-KFLPCI-KDFKC 411
Query: 370 NRNAPRYAN-FSIKCGGPQM----RADNIVYEAD-NSSLSASSYVVTSTEKWAVSNVGLF 423
PRY++ + CGG M + +YE D N A+ Y + W S+ G F
Sbjct: 412 ----PRYSSCLHVNCGGSDMYVKEKKTKELYEGDGNVEGGAAKYFLKPDANWGFSSTGDF 467
Query: 424 NEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILD 483
+ N T+ + + +LY+++RI P SL Y+ LENG Y ++L FAE +
Sbjct: 468 MDDNNFQNTRFTMF-VPASNQSDLYKSARIAPVSLTYFHACLENGNYTINLDFAEIRFTN 526
Query: 484 RSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLWA 543
E + LG R+FDIYIQ L KDF+I EA G IIK A V+ + L I L WA
Sbjct: 527 --DENYNRLGRRLFDIYIQEKLVAKDFNIMDEAKGAQTPIIKPLTAYVTNHFLTIRLSWA 584
Query: 544 GKGTCCVPTQGDYGPAISALSAVSAFKPS---VSGLPPGTPGNKNHTGMIVGIAVP---L 597
GKGT +PT+G YGP ISA+S VS KP +G+ PG + +GI P +
Sbjct: 585 GKGTTRIPTRGVYGPIISAISIVSDSKPCERPKTGMSPG-------AYIAIGIGAPCLII 637
Query: 598 GILGLIVISIVFYM--RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGG 655
ILG + I R++KD +EE+ G TF+ +++ AT DF+P+NK+GEGG
Sbjct: 638 FILGFLWICGCLPRCGRQRKDPYEEELPSG------TFTLRQIKFATDDFNPTNKIGEGG 691
Query: 656 YGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715
+G V+KG L+DGRV+AVKQLS S QG +F+NEI IS +QH NLV+L+G C+E A+ L
Sbjct: 692 FGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLL 751
Query: 716 LVYD 719
L Y+
Sbjct: 752 LAYE 755
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/727 (36%), Positives = 403/727 (55%), Gaps = 48/727 (6%)
Query: 12 WNISGNPCSGSALNATDSAFESPDN----NPAIVCDCTFDNGATCHITKLRVYALNKKGV 67
WN S +PC + ++ + +P+ A+ C+C+ CH+T + + A + +G
Sbjct: 49 WNFSVDPCDETL---SEGGWRNPNAAKGFEDAVTCNCS---SVICHVTNIVLKAQDLQGS 102
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P +L L +L L + RN+ G +P G S L + SL N SG +P+ELGNL L+
Sbjct: 103 LPTDLSGLPFLQELDLTRNYLNGSIPPEWGASSLLNI-SLLGNRISGSIPKELGNLTTLS 161
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L L N SG +PPE+GNL L+ L + S SGEIPSTFAKL + LR SD FTG
Sbjct: 162 GLVLEYNQLSGKIPPELGNLPNLKRLLLSSNNLSGEIPSTFAKLTTLTDLRISDNQFTGA 221
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
IPDFI NW L L +Q + GPIPS++ L +L LRI+D+ S + ++ ++K
Sbjct: 222 IPDFIQNWKGLEKLVIQASGLVGPIPSAIGLLGTLTDLRITDLSGPESPFPPLRNMTSMK 281
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
L LRN +TG +P+ +G+ + L+ LDLSFN L+G IP T + +++++ +N L+G
Sbjct: 282 YLILRNCNLTGDLPAYLGQNRKLKNLDLSFNKLSGPIPATYSGLSDVDFIYFTSNMLNGQ 341
Query: 308 LPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTF-------DGSNISVFPGL 360
+P+ + ID++YN+ S T Q +VN F+ + SN+S
Sbjct: 342 VPSWMVDQGDTIDITYNNFSKD----KTEECQQK-SVNTFSSTSPLVANNSSNVS----- 391
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNV 420
CL + + C + + I CGG ++ ++ Y+AD + Y S W SN
Sbjct: 392 -CLSK-YTCPKT---FYGLHINCGGNEITSNETKYDAD--TWDTPGY-YDSKNGWVSSNT 443
Query: 421 GLF---NEKENPAYVLNTLAQMTGTRTP---ELYQTSRITPGSLRYYGLGLENGPYKVSL 474
G F + N + +++ T + LY +R++ SL Y L L G Y V+L
Sbjct: 444 GNFLDDDRTNNGKSKWSNSSELKITNSSIDFRLYTQARLSAISLTYQALCLGKGNYTVNL 503
Query: 475 LFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSEN 534
FAE I+ + +LG R FDIY+QG KDF+I EA G +A++K F V+
Sbjct: 504 HFAE--IMFNEKNMYSNLGRRYFDIYVQGKREVKDFNIVDEAKGVGKAVVKKFPVMVTNG 561
Query: 535 HLEIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIA 594
LEI L WAGKGT +P +G YGP ISA+S F P P G + G +VG
Sbjct: 562 KLEIRLQWAGKGTQAIPVRGVYGPLISAVSVDPDFIPPKE--PGTGTGGGSSVGTVVGSV 619
Query: 595 VPLGILGLIVISIVFYMR--RKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLG 652
+ + +++I + + R + + E+ ++ + ++FS +++ AT +FDP+NK+G
Sbjct: 620 IASTVFLVLLIGGILWWRGCLRPKSQMEKDFKNLDFQISSFSLRQIKVATDNFDPANKIG 679
Query: 653 EGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA 712
EGG+GPV+KG ++DG VIAVKQLS S QG +F+NEIA ISA+QH +LV+LYGCC+EG
Sbjct: 680 EGGFGPVHKGIMTDGTVIAVKQLSAKSKQGNREFLNEIAMISALQHPHLVKLYGCCVEGD 739
Query: 713 RRLLVYD 719
+ LLVY+
Sbjct: 740 QLLLVYE 746
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 271/720 (37%), Positives = 399/720 (55%), Gaps = 46/720 (6%)
Query: 17 NPCSGSALNATDSAFESP--DNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVT 74
+PCS L P D N I CDC+F+N C IT+L + ++ +G +P EL
Sbjct: 57 DPCSSKTLKIIQEVDFVPNLDINNTIGCDCSFNNNTICRITELALKTMSLRGKLPPELTK 116
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
L YL +++ RN+ +G +P ++ LT +S+ N SG +P L N K L L + N
Sbjct: 117 LPYLKSIELCRNYLSGTIPMEWAKMAYLTSISVCANNLSGNLPAGLQNFKNLTFLGVEGN 176
Query: 135 NFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGN 194
FSG +P E+GNL L L + S +G +P T A+L N++ +R D +FTG IP +IGN
Sbjct: 177 QFSGPIPDELGNLTSLTGLELASNKFTGILPGTLARLVNLERVRICDNNFTGIIPAYIGN 236
Query: 195 WTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNA 254
WT+L L L + GPIP ++ +L +L L +SD + S + +S K LK L LRN
Sbjct: 237 WTRLQKLHLYASGLTGPIPDAVVRLENLLELSLSDTTGIKSFPN--LSSKGLKRLILRNV 294
Query: 255 LITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE 314
++G IPS I L +L+ LDLSFN L G + + ++L N LSG + +
Sbjct: 295 GLSGPIPSYIWNLTDLKILDLSFNKLNGIVQGVQ---NPPKNIYLTGNLLSGNIESGGLL 351
Query: 315 NLQN-IDLSYNHLSGPFPSWVTSSLQMNLAVNNF--TFDGSNISVFPGLQCLQRNFPCN- 370
N Q+ IDLSYN+ SW +SS Q +N + ++ +N++ P PC
Sbjct: 352 NSQSYIDLSYNNF-----SW-SSSCQKGSTINTYQSSYSKNNLTGLP---------PCAV 396
Query: 371 -RNAPRYANF-SIKCGGPQMRADN----IVYEADNSSLSASSYVVTSTEKWAVSNVGLFN 424
N +Y F I CGG ++ N I Y+ DNS + ++ + W VSN G F
Sbjct: 397 PANCKKYQRFLHINCGGEEVSIRNSLGKITYQTDNSRQTNAA-SNQQFDYWGVSNTGDFT 455
Query: 425 E--KENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSIL 482
+ ++ Y +T ++G P+LY+T+R + SL YY LENG Y V L F E
Sbjct: 456 DDNSDHDEYYTSTNLTLSGDY-PDLYKTARRSALSLVYYAFCLENGNYNVKLHFMEIQFS 514
Query: 483 DRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLW 542
D+ E + LG R+FD+Y+QG L +DF+I+KEA G + +IK NA V+ + LEI L W
Sbjct: 515 DK--EVYSRLGRRIFDVYVQGKLFLRDFNINKEANGNMKPVIKEINATVTNHMLEIRLYW 572
Query: 543 AGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGILGL 602
AGKGT +P +G+YGP ISA+S + +P G K+H + + ++ +
Sbjct: 573 AGKGTTLIPKRGNYGPLISAISLCHSQEPLC-----GVEKTKHHIKYPLILGASGALVTI 627
Query: 603 IVISIVFYMRRKKDNDDEEVLVGIES---KPNTFSYAELRSATKDFDPSNKLGEGGYGPV 659
+++++ Y R D+ + + + FS+ +L++AT +FD +NKLGEGG+G V
Sbjct: 628 VLLAVGIYARGIYRRDNNRRERDLRAQGLQTVCFSWRQLQTATNNFDQANKLGEGGFGSV 687
Query: 660 YKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+KG LSDG +IAVKQLS S QG +FVNEI IS + H NLV+LYGCC+E + LLVY+
Sbjct: 688 FKGELSDGTIIAVKQLSSKSSQGNREFVNEIGMISGLNHPNLVKLYGCCVERDQLLLVYE 747
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU1|Y5374_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 205/700 (29%), Positives = 309/700 (44%), Gaps = 105/700 (15%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVF 112
H+ +LR+ +N G + EL L LT L N TG +P +GNL+ L L L+ N
Sbjct: 78 HVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQL 137
Query: 113 SGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLH 172
+G +P+ELG+L L +L + N SG LP + NL KL+ ++++ +G+IP ++ L
Sbjct: 138 TGSLPQELGSLSNLLILQIDYNEISGKLPTSLANLKKLKHFHMNNNSITGQIPPEYSTLT 197
Query: 173 NMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISDIY 231
N+ + TG +P + L L+L G++F G IPSS
Sbjct: 198 NVLHFLMDNNKLTGNLPPELAQMPSLRILQLDGSNFDGTEIPSSYG-------------- 243
Query: 232 FVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-- 289
S+ NL LSLRN + G IP + + L LD+S N LTG+IP+ F
Sbjct: 244 ----------SIPNLVKLSLRNCNLEGPIPD-LSKSLVLYYLDISSNKLTGEIPKNKFSA 292
Query: 290 NIDSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPS-WVTSSLQMNLAVNN 346
NI ++N L NN LSG++P+ S LQ + + N+LSG P W L+ A
Sbjct: 293 NITTIN---LYNNLLSGSIPSNFSGLPRLQRLQVQNNNLSGEIPVIWENRILK---AEEK 346
Query: 347 FTFDGSNISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASS 406
D N ++F + + N P N Y N P N AD +S
Sbjct: 347 LILDLRN-NMFSNVSSVLLNPPSNVTVKLYGN-------PVCANVNAGKLADLCGISTLE 398
Query: 407 YVVTSTEKWAVSNVGLFNE----KENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYG 462
+T +S + EN YV+ + + L R+ S +
Sbjct: 399 VESPATSSETISTGDCKRQSCPVSENYDYVIGS--PVACFCAAPLGIDLRLRSPSFSDF- 455
Query: 463 LGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGP--- 519
PYKVS + LD ++ + +LG + I I T W+ GP
Sbjct: 456 -----RPYKVSYM------LDVASPK--NLGINPYQISID-TFAWQ--------SGPRLF 493
Query: 520 -NRAIIKNFNAAVSE-NHLEIHLLWAGKGTCCVPTQGDYGPA------ISALSAVSAFKP 571
N I ++ S+ N E+ + T + T GP A V+ P
Sbjct: 494 MNMKIFPEYSELNSKFNSTEVQRIVDFFATFTLNTDDSLGPYEIISINTGAYKDVTIIFP 553
Query: 572 SVSGLPPGTPGNKNHTGMIVGIAVPLGILGLIVISIVFYM--------RRKKDNDDEEVL 623
SG+ G G+I+G A+ L L +++VF++ R+ D + E L
Sbjct: 554 KKSGMSIGV-----SVGIIIG-AIAF-FLVLSSLALVFFIKRSKRKRKTREVDMEQEHPL 606
Query: 624 ----VGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS 679
+ +ES +++ EL SAT F +++G GGYG VYKG L G V+AVK+ S
Sbjct: 607 PKPPMNMESV-KGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGS 665
Query: 680 HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
QG+ +F EI +S + HRNLV L G C + ++LVY+
Sbjct: 666 LQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYE 705
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 905 | ||||||
| 296089254 | 1037 | unnamed protein product [Vitis vinifera] | 0.791 | 0.690 | 0.724 | 0.0 | |
| 359484008 | 1037 | PREDICTED: probable LRR receptor-like se | 0.792 | 0.691 | 0.720 | 0.0 | |
| 225444253 | 1048 | PREDICTED: probable LRR receptor-like se | 0.792 | 0.684 | 0.709 | 0.0 | |
| 296089258 | 2282 | unnamed protein product [Vitis vinifera] | 0.792 | 0.314 | 0.709 | 0.0 | |
| 224072359 | 1016 | predicted protein [Populus trichocarpa] | 0.788 | 0.702 | 0.706 | 0.0 | |
| 224053719 | 1041 | predicted protein [Populus trichocarpa] | 0.792 | 0.688 | 0.703 | 0.0 | |
| 255571932 | 1040 | ATP binding protein, putative [Ricinus c | 0.801 | 0.697 | 0.653 | 0.0 | |
| 359484016 | 1039 | PREDICTED: probable LRR receptor-like se | 0.781 | 0.680 | 0.634 | 0.0 | |
| 147820428 | 957 | hypothetical protein VITISV_041450 [Viti | 0.924 | 0.874 | 0.516 | 0.0 | |
| 359495319 | 1000 | PREDICTED: probable LRR receptor-like se | 0.783 | 0.709 | 0.625 | 0.0 |
| >gi|296089254|emb|CBI39026.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/722 (72%), Positives = 604/722 (83%), Gaps = 6/722 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD + LWNISG PC+GSA++ S FE NNPAI CDCT++N TCHIT+LRVY
Sbjct: 55 FQQWDTQSAALWNISGEPCTGSAISG--SGFEETANNPAITCDCTYNNSTTCHITQLRVY 112
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALN++GVIPEEL L YLTFLKID+N+FTGPLPSFIGNLS+L LLSLAHN SG +P EL
Sbjct: 113 ALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMEL 172
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNL+EL +LSL++NNFSG LPPE+GNL L ELYI+S G GEIPSTFA L NMQ++RAS
Sbjct: 173 GNLQELTVLSLSSNNFSGTLPPELGNLVNLRELYINSLGVGGEIPSTFANLENMQVMRAS 232
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D F+GKIPDFIGNWTKLT+LR QGNSF+GPIPSS SKL SL SLRISD++ VSSSLDF+
Sbjct: 233 DCPFSGKIPDFIGNWTKLTSLRFQGNSFEGPIPSSFSKLTSLSSLRISDLFNVSSSLDFI 292
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
LKNL DL LRNALITG+IPS IGE Q+LQ LDLSFNNLTG IP +LFN+ SL LFLG
Sbjct: 293 KDLKNLTDLVLRNALITGSIPSYIGEFQSLQRLDLSFNNLTGGIPSSLFNLGSLANLFLG 352
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NNSLSGTLPTQKS+ LQNIDLSYN LSG FPSWVTS LQ+NL NNFTFD SN S+ PGL
Sbjct: 353 NNSLSGTLPTQKSKQLQNIDLSYNELSGSFPSWVTSGLQLNLVANNFTFDSSNRSLLPGL 412
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAVSN 419
CLQRNFPCN+N PRYANFSIKCGG +MR A+ IVYEA+NS+L A+SY VTSTEKWAVSN
Sbjct: 413 NCLQRNFPCNKNTPRYANFSIKCGGSEMRNAEGIVYEAENSTLGAASYYVTSTEKWAVSN 472
Query: 420 VGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAET 479
VGLF+++ NP+YV N L Q+TGT TPEL+Q+SRI+PGSLRYYGLGLENGPY VSL FAET
Sbjct: 473 VGLFSDRSNPSYVDNNLMQVTGTNTPELFQSSRISPGSLRYYGLGLENGPYIVSLEFAET 532
Query: 480 SILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIH 539
DR T+ WESLG RVFDIYIQG L++KDFDISKEAGG RA+ K F A VSEN+LEIH
Sbjct: 533 VFKDRDTQTWESLGRRVFDIYIQGALQFKDFDISKEAGGVERALEKKFYATVSENYLEIH 592
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGI 599
L WAGKGTCC P QG YGP+ISALS VS F P+V+G PP P KN+TG+IVG+AV +G+
Sbjct: 593 LFWAGKGTCCNPIQGYYGPSISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGV 652
Query: 600 LGLIVISIVFYMRRKKD--NDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYG 657
+ +I+I V Y++RK N+DEE L GI +PNTFSY+ELR+AT+DF+P+NKLGEGG+G
Sbjct: 653 VSMILICSVLYIKRKASYVNEDEEFL-GIGPRPNTFSYSELRTATEDFNPANKLGEGGFG 711
Query: 658 PVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717
PVYKGTL+DGRV+AVKQLS+AS QGK+QFV EIA ISAVQHRNLV+LYGCCIEG RRLLV
Sbjct: 712 PVYKGTLNDGRVVAVKQLSVASQQGKSQFVAEIAAISAVQHRNLVKLYGCCIEGNRRLLV 771
Query: 718 YD 719
Y+
Sbjct: 772 YE 773
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484008|ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/723 (72%), Positives = 603/723 (83%), Gaps = 6/723 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD + LWNISG PC+GSA++ S FE NNPAI CDCT++N TCHIT+LRVY
Sbjct: 10 FQQWDTQSAALWNISGEPCTGSAISG--SGFEETANNPAITCDCTYNNSTTCHITQLRVY 67
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALN++GVIPEEL L YLTFLKID+N+FTGPLPSFIGNLS+L LLSLAHN SG +P EL
Sbjct: 68 ALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMEL 127
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNL+EL +LSL++NNFSG LPPE+GNL L ELYI+S G GEIPSTFA L NMQ++RAS
Sbjct: 128 GNLQELTVLSLSSNNFSGTLPPELGNLVNLRELYINSLGVGGEIPSTFANLENMQVMRAS 187
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D F+GKIPDFIGNWTKLT+LR QGNSF+GPIPSS SKL SL SLRISD++ VSSSLDF+
Sbjct: 188 DCPFSGKIPDFIGNWTKLTSLRFQGNSFEGPIPSSFSKLTSLSSLRISDLFNVSSSLDFI 247
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
LKNL DL LRNALITG+IPS IGE Q+LQ LDLSFNNLTG IP +LFN+ SL LFLG
Sbjct: 248 KDLKNLTDLVLRNALITGSIPSYIGEFQSLQRLDLSFNNLTGGIPSSLFNLGSLANLFLG 307
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NNSLSGTLPTQKS+ LQNIDLSYN LSG FPSWVTS LQ+NL NNFTFD SN S+ PGL
Sbjct: 308 NNSLSGTLPTQKSKQLQNIDLSYNELSGSFPSWVTSGLQLNLVANNFTFDSSNRSLLPGL 367
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAVSN 419
CLQRNFPCN+N PRYANFSIKCGG +MR A+ IVYEA+NS+L A+SY VTSTEKWAVSN
Sbjct: 368 NCLQRNFPCNKNTPRYANFSIKCGGSEMRNAEGIVYEAENSTLGAASYYVTSTEKWAVSN 427
Query: 420 VGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAET 479
VGLF+++ NP+YV N L Q+TGT TPEL+Q+SRI+PGSLRYYGLGLENGPY VSL FAET
Sbjct: 428 VGLFSDRSNPSYVDNNLMQVTGTNTPELFQSSRISPGSLRYYGLGLENGPYIVSLEFAET 487
Query: 480 SILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIH 539
DR T+ WESLG RVFDIYIQG L++KDFDISKEAGG RA+ K F A VSEN+LEIH
Sbjct: 488 VFKDRDTQTWESLGRRVFDIYIQGALQFKDFDISKEAGGVERALEKKFYATVSENYLEIH 547
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGI 599
L WAGKGTCC P QG YGP+ISALS VS F P+V+G PP P KN+TG+IVG+AV +G+
Sbjct: 548 LFWAGKGTCCNPIQGYYGPSISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGV 607
Query: 600 LGLIVISIVFYMRRKKD--NDDEEV-LVGIESKPNTFSYAELRSATKDFDPSNKLGEGGY 656
+ +I+I V Y++RK N+DE +GI +PNTFSY+ELR+AT+DF+P+NKLGEGG+
Sbjct: 608 VSMILICSVLYIKRKASYVNEDEVAEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGF 667
Query: 657 GPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716
GPVYKGTL+DGRV+AVKQLS+AS QGK+QFV EIA ISAVQHRNLV+LYGCCIEG RRLL
Sbjct: 668 GPVYKGTLNDGRVVAVKQLSVASQQGKSQFVAEIAAISAVQHRNLVKLYGCCIEGNRRLL 727
Query: 717 VYD 719
VY+
Sbjct: 728 VYE 730
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444253|ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/723 (70%), Positives = 603/723 (83%), Gaps = 6/723 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD +V LWNISG PC+GSA+N T AFES DNNPAI CDC++D+G TCHIT+LRVY
Sbjct: 55 FQQWDTQSVALWNISGEPCTGSAINGT--AFESDDNNPAIKCDCSYDSGTTCHITQLRVY 112
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNKKGVIPEEL TL YLTFLKID+N+FTGPLPSFIGNLS+L+LLS+AHN FSG +P+EL
Sbjct: 113 ALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKLSLLSIAHNAFSGTIPKEL 172
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNL EL +LSL +NNFSG LPPE+GNL+KL ELYI+SCGA GEIPSTFA+L N+Q++ S
Sbjct: 173 GNLTELEVLSLGSNNFSGNLPPELGNLSKLRELYINSCGAGGEIPSTFAELLNLQVMEGS 232
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D+ FTGKIP+FIGN+T+LT+LR QGNSF+GPIPSS SKL SL SLRISD+Y VSSSLDF+
Sbjct: 233 DSPFTGKIPNFIGNFTRLTSLRFQGNSFEGPIPSSFSKLISLSSLRISDLYNVSSSLDFI 292
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
LKNL DL+LRNALI+G+IPS GE Q LQ LDLSFNNLTG++P +LFN +L LFLG
Sbjct: 293 RDLKNLTDLNLRNALISGSIPSFTGEFQKLQRLDLSFNNLTGEVPSSLFNSSALTDLFLG 352
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS--LQMNLAVNNFTFDGSNISVFP 358
NNSLSG+LP QKSE L+NIDLSYN LSG FPSWVTS+ LQ+NL NNF F SN S F
Sbjct: 353 NNSLSGSLPAQKSEELKNIDLSYNQLSGSFPSWVTSASGLQLNLVANNFIFGSSNSSFFQ 412
Query: 359 GLQCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAV 417
GL CLQRNFPCNRN P YANFS+ CGG +MR AD VYE DNSSL A+SY VT+TEKWAV
Sbjct: 413 GLNCLQRNFPCNRNTPLYANFSVNCGGQEMRIADGTVYEVDNSSLGAASYYVTNTEKWAV 472
Query: 418 SNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFA 477
SNVGLF++ NPAY+ N L Q+ T TPEL+QTSR++PGSLRYYGLGLENG Y VSL FA
Sbjct: 473 SNVGLFSDSSNPAYLENNLKQVADTSTPELFQTSRVSPGSLRYYGLGLENGNYTVSLEFA 532
Query: 478 ETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLE 537
ET RSTE WESLG RVFDIYIQG+L+ KDFDISKEAGG ++A+ K FNA VSEN+LE
Sbjct: 533 ETKFASRSTETWESLGRRVFDIYIQGSLQLKDFDISKEAGGVDKALEKKFNATVSENYLE 592
Query: 538 IHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPL 597
IHL WAGKGTCC+P QG YGP+ISALS VS F PSVSG+P P KN+TG+IVG+ V +
Sbjct: 593 IHLFWAGKGTCCIPVQGYYGPSISALSVVSDFTPSVSGIPSIPPSKKNNTGLIVGVVVAV 652
Query: 598 GILGLIVISIVFYMRRKKDN-DDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGY 656
G + I+I VFYM+ + N +++E L+GI +PNTF+YAELR+AT+DF+P+NKLGEGG+
Sbjct: 653 GSVSFILICAVFYMKMRASNINEDEELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGF 712
Query: 657 GPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716
GPVYKG L+D R +AVKQLS+ASHQGK+QF+ EIATISAVQHRNLV+LYGCCIEG +RLL
Sbjct: 713 GPVYKGKLNDERAVAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGDKRLL 772
Query: 717 VYD 719
VY+
Sbjct: 773 VYE 775
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089258|emb|CBI39030.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/723 (70%), Positives = 603/723 (83%), Gaps = 6/723 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD +V LWNISG PC+GSA+N T AFES DNNPAI CDC++D+G TCHIT+LRVY
Sbjct: 55 FQQWDTQSVALWNISGEPCTGSAINGT--AFESDDNNPAIKCDCSYDSGTTCHITQLRVY 112
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNKKGVIPEEL TL YLTFLKID+N+FTGPLPSFIGNLS+L+LLS+AHN FSG +P+EL
Sbjct: 113 ALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKLSLLSIAHNAFSGTIPKEL 172
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNL EL +LSL +NNFSG LPPE+GNL+KL ELYI+SCGA GEIPSTFA+L N+Q++ S
Sbjct: 173 GNLTELEVLSLGSNNFSGNLPPELGNLSKLRELYINSCGAGGEIPSTFAELLNLQVMEGS 232
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D+ FTGKIP+FIGN+T+LT+LR QGNSF+GPIPSS SKL SL SLRISD+Y VSSSLDF+
Sbjct: 233 DSPFTGKIPNFIGNFTRLTSLRFQGNSFEGPIPSSFSKLISLSSLRISDLYNVSSSLDFI 292
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
LKNL DL+LRNALI+G+IPS GE Q LQ LDLSFNNLTG++P +LFN +L LFLG
Sbjct: 293 RDLKNLTDLNLRNALISGSIPSFTGEFQKLQRLDLSFNNLTGEVPSSLFNSSALTDLFLG 352
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS--LQMNLAVNNFTFDGSNISVFP 358
NNSLSG+LP QKSE L+NIDLSYN LSG FPSWVTS+ LQ+NL NNF F SN S F
Sbjct: 353 NNSLSGSLPAQKSEELKNIDLSYNQLSGSFPSWVTSASGLQLNLVANNFIFGSSNSSFFQ 412
Query: 359 GLQCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAV 417
GL CLQRNFPCNRN P YANFS+ CGG +MR AD VYE DNSSL A+SY VT+TEKWAV
Sbjct: 413 GLNCLQRNFPCNRNTPLYANFSVNCGGQEMRIADGTVYEVDNSSLGAASYYVTNTEKWAV 472
Query: 418 SNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFA 477
SNVGLF++ NPAY+ N L Q+ T TPEL+QTSR++PGSLRYYGLGLENG Y VSL FA
Sbjct: 473 SNVGLFSDSSNPAYLENNLKQVADTSTPELFQTSRVSPGSLRYYGLGLENGNYTVSLEFA 532
Query: 478 ETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLE 537
ET RSTE WESLG RVFDIYIQG+L+ KDFDISKEAGG ++A+ K FNA VSEN+LE
Sbjct: 533 ETKFASRSTETWESLGRRVFDIYIQGSLQLKDFDISKEAGGVDKALEKKFNATVSENYLE 592
Query: 538 IHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPL 597
IHL WAGKGTCC+P QG YGP+ISALS VS F PSVSG+P P KN+TG+IVG+ V +
Sbjct: 593 IHLFWAGKGTCCIPVQGYYGPSISALSVVSDFTPSVSGIPSIPPSKKNNTGLIVGVVVAV 652
Query: 598 GILGLIVISIVFYMRRKKDN-DDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGY 656
G + I+I VFYM+ + N +++E L+GI +PNTF+YAELR+AT+DF+P+NKLGEGG+
Sbjct: 653 GSVSFILICAVFYMKMRASNINEDEELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGF 712
Query: 657 GPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716
GPVYKG L+D R +AVKQLS+ASHQGK+QF+ EIATISAVQHRNLV+LYGCCIEG +RLL
Sbjct: 713 GPVYKGKLNDERAVAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGDKRLL 772
Query: 717 VYD 719
VY+
Sbjct: 773 VYE 775
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224072359|ref|XP_002303698.1| predicted protein [Populus trichocarpa] gi|222841130|gb|EEE78677.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/720 (70%), Positives = 584/720 (81%), Gaps = 6/720 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD AV LWN+SG PCSGSA++ TD FE PDNNPAI C+CT TCHIT+LRVY
Sbjct: 26 FEQWDTQAVGLWNLSGEPCSGSAIDQTD--FEDPDNNPAIKCECT---QTTCHITQLRVY 80
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNKKGVIPE L L+YLTFLKID+N+FTGPLP+FIGNLS L LS+AHN FSG +P+EL
Sbjct: 81 ALNKKGVIPEVLAALKYLTFLKIDQNYFTGPLPAFIGNLSALKGLSIAHNAFSGTIPKEL 140
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNLKEL LLS NNFSG LPPE+GNL LEELYI+SCG GEIPSTFA L +++L AS
Sbjct: 141 GNLKELTLLSFGVNNFSGTLPPELGNLVNLEELYINSCGLGGEIPSTFANLQRLRVLWAS 200
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D FTG IPDFIGNWT LT+LR QGNSF+GPIP S S L SL SLRISD+ +SS+LDF+
Sbjct: 201 DDSFTGNIPDFIGNWTGLTSLRFQGNSFEGPIPLSFSNLTSLNSLRISDLSNMSSTLDFI 260
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
+LKNL DL+LRNALI G+IPS IGELQ L LDLSFNNLTGQ+P LF + SL YLFLG
Sbjct: 261 KNLKNLTDLNLRNALINGSIPSDIGELQTLNRLDLSFNNLTGQVPSALFPMSSLEYLFLG 320
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NNSLSGTLP QKS+ LQ IDLSYN+L+G FPSWV S++Q+NL NNFTFD SNISV PGL
Sbjct: 321 NNSLSGTLPEQKSDTLQTIDLSYNYLTGTFPSWVASNVQLNLVANNFTFDNSNISVLPGL 380
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAVSN 419
CLQRNFPCNR+ PRYANFSIKCGGP+MR AD VYEA+NSSLSA+S+ VTSTEKWAVSN
Sbjct: 381 NCLQRNFPCNRDNPRYANFSIKCGGPEMRTADGTVYEAENSSLSAASFSVTSTEKWAVSN 440
Query: 420 VGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAET 479
VGLF ++ +P YV NTL Q+ T PELYQTSRI+PGSLRY+GLGLENGPY V LLFAET
Sbjct: 441 VGLFADRRSPDYVENTLTQVLSTNIPELYQTSRISPGSLRYFGLGLENGPYTVHLLFAET 500
Query: 480 SILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIH 539
+ DRS++ WESLG RVFDIYIQG+ + KDFDISKEAGG R+I + FN VSENHLEIH
Sbjct: 501 AFADRSSQTWESLGRRVFDIYIQGSRQLKDFDISKEAGGVERSITRIFNVTVSENHLEIH 560
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGI 599
L WAGKGTCC P QG YGP ISAL+ V F P+VSG+PP T K+ TGM+VGI+V G+
Sbjct: 561 LFWAGKGTCCTPVQGYYGPIISALNVVPGFTPTVSGIPPSTRKEKSRTGMVVGISVSAGV 620
Query: 600 LGLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPV 659
+ L +I V Y+ RKKD++DEEV G+ PNTFSYA+LR AT DF PSN LGEGG+G V
Sbjct: 621 VCLTLIFAVVYIMRKKDSEDEEVFPGMGPGPNTFSYAQLRGATDDFSPSNMLGEGGFGAV 680
Query: 660 YKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
YKG LSDGR +AVKQLS+AS+QG +QF+ EIATISAVQH NLV+LYGCCIEG RRLLVY+
Sbjct: 681 YKGLLSDGRAVAVKQLSVASNQGMSQFITEIATISAVQHCNLVKLYGCCIEGNRRLLVYE 740
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053719|ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|222845203|gb|EEE82750.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/721 (70%), Positives = 593/721 (82%), Gaps = 4/721 (0%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QWD AV LWN+SG PCSGSA+N TD FE NNPAI C CT++N ATCHIT+LRVY
Sbjct: 51 FEQWDTKAVGLWNLSGEPCSGSAINGTD--FEDTANNPAIKCVCTYNNSATCHITQLRVY 108
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNK+G IPE + L+YLT LKID+N+FTGPLP+FIGNL+ L LS+AHN FSG +P EL
Sbjct: 109 ALNKRGEIPEVITALKYLTLLKIDQNYFTGPLPAFIGNLTALQSLSIAHNAFSGTIPTEL 168
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNLKEL LLS+ NNFSG LPPE+G L LE+LY++SCG GEIPSTF L M I AS
Sbjct: 169 GNLKELTLLSIGINNFSGTLPPELGQLVNLEQLYVNSCGLGGEIPSTFVNLKKMTIFSAS 228
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
DA FTG IPDFIGNWT+LT+LR QGNSF+GPIPSS S L SLESLRISD+ VSS+LDF+
Sbjct: 229 DAAFTGNIPDFIGNWTRLTSLRFQGNSFEGPIPSSFSNLTSLESLRISDLSNVSSTLDFI 288
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGEL-QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFL 299
+LK+L DL+LRNALI+G+IPS IGE+ Q L LDLSFNNLTGQ+P LFN+ SL YLFL
Sbjct: 289 KNLKSLTDLTLRNALISGSIPSDIGEIFQTLDRLDLSFNNLTGQVPSALFNMSSLQYLFL 348
Query: 300 GNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPG 359
GNNSL GTLP QKS LQ IDLSYN+LSG FPSWVTS++Q+NL NNFTFD SNISV PG
Sbjct: 349 GNNSLIGTLPNQKSSKLQTIDLSYNYLSGTFPSWVTSNIQLNLVANNFTFDSSNISVLPG 408
Query: 360 LQCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAVS 418
L CLQRNFPCNRN P YANFSIKCGGP MR AD VYEA+NSS+SA+S+ VTSTEKWAVS
Sbjct: 409 LNCLQRNFPCNRNPPLYANFSIKCGGPMMRTADGTVYEAENSSISAASFTVTSTEKWAVS 468
Query: 419 NVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAE 478
N GL+ ++ENP+YV N L Q+TGT TPELYQTSRI+PGSLRYYGLGL+NGPY ++LLFAE
Sbjct: 469 NAGLYADRENPSYVENNLKQVTGTNTPELYQTSRISPGSLRYYGLGLQNGPYTINLLFAE 528
Query: 479 TSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEI 538
T RS++ W+SL RVFDIYIQG + KDFDIS EAGG +RAI K FN VSENHLEI
Sbjct: 529 TRFAARSSQTWDSLARRVFDIYIQGNRQLKDFDISMEAGGVDRAITKTFNVTVSENHLEI 588
Query: 539 HLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLG 598
HL WAGKGTCC P QG YGP ISAL+ V F P+VSG+P T K+ TG+IVG+++ +G
Sbjct: 589 HLFWAGKGTCCNPVQGYYGPIISALNVVPDFTPNVSGIPSSTRKEKSRTGVIVGVSISVG 648
Query: 599 ILGLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGP 658
++ LI+IS++ Y+R KKD++DEEVL+G+ +PNTFSY++LR+AT+DF PSNKLGEGGYGP
Sbjct: 649 VVSLILISVLLYIRLKKDSEDEEVLLGMGPRPNTFSYSQLRTATEDFSPSNKLGEGGYGP 708
Query: 659 VYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
VYKG LSDGR +AVK+LS+AS+QG NQFV EIATISAVQHRNLV+LYGCCIEG RRLLVY
Sbjct: 709 VYKGMLSDGREVAVKKLSVASNQGTNQFVTEIATISAVQHRNLVKLYGCCIEGNRRLLVY 768
Query: 719 D 719
+
Sbjct: 769 E 769
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571932|ref|XP_002526908.1| ATP binding protein, putative [Ricinus communis] gi|223533747|gb|EEF35480.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/734 (65%), Positives = 587/734 (79%), Gaps = 9/734 (1%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
++ W + WNISG+PC+G+A++ +D E+P N+P+I CDC+FDN +TCHIT+L V+
Sbjct: 50 LQGWSTQSTDSWNISGDPCTGTAIDESD--IEAPGNSPSIKCDCSFDNNSTCHITRLLVF 107
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
LN++G+IPE L+ L++L FLK+D+N+FTGPLP+F+GNL+ L L++AHN+ SGP+P+E+
Sbjct: 108 NLNRRGMIPETLLVLKHLIFLKLDKNYFTGPLPAFLGNLTALRTLAVAHNMLSGPIPKEI 167
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNLK+L LLSL NNFSG LPPE+GNL KLE+LYI+SCG +GEIP TFAKL ++IL A
Sbjct: 168 GNLKDLTLLSLGVNNFSGTLPPELGNLVKLEQLYINSCGLNGEIPPTFAKLTRIRILWAF 227
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D FTG IPDFIG WT+LT LRLQGNSF+GPIPSS S L S++SLR+SD+ VSS+LDF+
Sbjct: 228 DNPFTGNIPDFIGTWTELTTLRLQGNSFKGPIPSSFSNLVSMKSLRLSDLRNVSSTLDFI 287
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
+LKNL DL+LRNALIT TIP IGE QNL+ LDLSFNNL GQIP LF++ SL +LFLG
Sbjct: 288 KNLKNLTDLNLRNALITDTIPLDIGEFQNLEALDLSFNNLRGQIPNALFSLSSLEFLFLG 347
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NNSLSG LP +KS LQ IDLSYN+LSG FP+WV S+LQ+NL NNF FD SN+SV PGL
Sbjct: 348 NNSLSGALPNEKSGLLQTIDLSYNNLSGRFPAWVNSNLQLNLVANNFVFDRSNMSVIPGL 407
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNV 420
CLQRNFPCNRN PRYANFSIKCGGP+MRA I+YEA+NS++ +S VTST+KWAVS
Sbjct: 408 NCLQRNFPCNRNPPRYANFSIKCGGPEMRAAGILYEAENSTMGPASIHVTSTQKWAVSIT 467
Query: 421 GLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETS 480
GLF +++NP YV +T +Q+TGT +P+LY TSR +PGS+RYYGLGL+NGPY +SLLFAET
Sbjct: 468 GLFADRQNPVYVEHTQSQVTGTNSPDLYLTSRTSPGSIRYYGLGLQNGPYDISLLFAETG 527
Query: 481 ILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHL 540
+S++ WES G RVFDIYIQG L KDFDISKEAG A+ K FN V+ENHLEIHL
Sbjct: 528 FQHKSSQIWESNGRRVFDIYIQGRLELKDFDISKEAGAIEIAVTKRFNINVTENHLEIHL 587
Query: 541 LWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGIL 600
WAG GTCC P QG+YGP ISA++ V AF+P+VSG+PP T K+ T +IVGIAV G+L
Sbjct: 588 FWAGMGTCCTPIQGNYGPIISAVNVVPAFRPTVSGIPPNT-RKKSSTELIVGIAVSAGVL 646
Query: 601 GLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVY 660
I+I ++FY++ K DEEVL GI S+P TFSYAELR+ATK F PSN+LGEGGYGPVY
Sbjct: 647 TFILIFVMFYVKVKAGKLDEEVLSGISSRPITFSYAELRTATKGFCPSNQLGEGGYGPVY 706
Query: 661 KGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDG 720
KGTL DGR +AVKQLS+ASHQGK+QF+ EIATISAVQHRNLVRLYGCCIEG RRLLVY
Sbjct: 707 KGTLIDGREVAVKQLSLASHQGKDQFITEIATISAVQHRNLVRLYGCCIEGNRRLLVY-- 764
Query: 721 YLAPEYAMRGHLTE 734
EY M L +
Sbjct: 765 ----EYLMNKSLDQ 774
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484016|ref|XP_002272816.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/725 (63%), Positives = 564/725 (77%), Gaps = 18/725 (2%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
++WD AV LWNISG PCSGSA+N T+ FES N+PAI CDC++D+ TCHIT+LRV+
Sbjct: 43 FQKWDIEAVPLWNISGEPCSGSAINGTE--FESEANSPAIKCDCSYDSNTTCHITQLRVH 100
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNK+GVI EE YL LK+D+N+FTGPLPSFIGNLS+LT LS++HN SG +P+EL
Sbjct: 101 ALNKRGVIVEEFKAFTYLMVLKLDKNYFTGPLPSFIGNLSQLTYLSVSHNALSGTIPKEL 160
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
GNLKEL +LS+ +NNFSG LPPEIGNL KL+++YIDS G SGEIPSTFAKL +M ++ A+
Sbjct: 161 GNLKELLMLSIGSNNFSGTLPPEIGNLVKLQQIYIDSSGVSGEIPSTFAKLQDMVVMFAT 220
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D TGKIPDFIGNWTKL +LR QGNS +GPIPSS SKL SL +LRISD+ VSSSLDF+
Sbjct: 221 DVPITGKIPDFIGNWTKLESLRFQGNSLEGPIPSSFSKLTSLTTLRISDLSNVSSSLDFI 280
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
+KNL DL LRN+LI+G+IP IGE Q+L+TLDLSFNNLTG+IP LFN+ SL LFLG
Sbjct: 281 KEMKNLTDLVLRNSLISGSIPFYIGEFQSLKTLDLSFNNLTGEIPDALFNLSSLTSLFLG 340
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
N LSGT P QKSE LQ IDLSYN LSG FPSW+ S LQ+NL NN TFD +N S+F GL
Sbjct: 341 TNRLSGTFPAQKSEQLQTIDLSYNELSGSFPSWLKSGLQLNLVANNLTFDSTNRSIFEGL 400
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMRA-DNIVYEADNS---SLSASSYVVTSTEKWA 416
+CLQRNFPCNR+ P Y N SIKCGGP+ R D VYEADNS +++SY V+ E W
Sbjct: 401 ECLQRNFPCNRDPPPYTNVSIKCGGPEWRTPDGTVYEADNSITTGTASTSYYVSRLENWG 460
Query: 417 VSNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLF 476
VSNVGL++++ + +++GT PEL++TSRI+PGSLRYYGLGL+NG Y VSL F
Sbjct: 461 VSNVGLYSDR------IAYKTEVSGTNHPELFKTSRISPGSLRYYGLGLQNGHYTVSLQF 514
Query: 477 AETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHL 536
AE + D+S + WES+G RVFDIYIQGTL+ KDFDI+KEAGG RAI + FNA VS+N+L
Sbjct: 515 AEMELKDQSAQTWESIGRRVFDIYIQGTLQLKDFDITKEAGGVERAIERKFNAVVSQNYL 574
Query: 537 EIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVP 596
EIHL WAGKGTCC+P +G YGP+ISALS VS K +P TP K +TG+I GI
Sbjct: 575 EIHLFWAGKGTCCIPFEGYYGPSISALSVVSDLK----RVPTTTPPKKGYTGLIAGIVAA 630
Query: 597 LGILGLI-VISIVFYMRRKKDNDDEE-VLVGIESKPNTFSYAELRSATKDFDPSNKLGEG 654
+GIL I +I VFY++ K N +++ VL+G+ +PNTF YAELR+AT++F +NKLGEG
Sbjct: 631 IGILSFILIICAVFYVKWKASNLNKDIVLLGVGPRPNTFRYAELRTATENFSATNKLGEG 690
Query: 655 GYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714
G+G VYKGTL DGRV+AVK+L++AS GK+QF+ EIATISAVQHRNLV+LYG CI+G RR
Sbjct: 691 GFGSVYKGTLPDGRVVAVKELTVASQHGKSQFITEIATISAVQHRNLVKLYGFCIKGNRR 750
Query: 715 LLVYD 719
LLVY+
Sbjct: 751 LLVYE 755
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147820428|emb|CAN74435.1| hypothetical protein VITISV_041450 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/1013 (51%), Positives = 645/1013 (63%), Gaps = 176/1013 (17%)
Query: 8 AVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGV 67
V + G+ + ++N T+ FES N+PAI CDC++D+ TCHIT+LRV+ALNK+GV
Sbjct: 6 CVHCGTLVGSHVADLSINGTE--FESEANSPAIKCDCSYDSNTTCHITQLRVHALNKRGV 63
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
I EE YL +LS++HN SG +P+ELGNLKEL
Sbjct: 64 IVEEFKAFTYLM------------------------VLSVSHNALSGTIPKELGNLKELL 99
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
+LS+ +NNFSG LPPEIGNL KL+++YIDS G SGEIPSTFAKL +M ++ A+D TGK
Sbjct: 100 MLSIGSNNFSGTLPPEIGNLVKLQQIYIDSSGVSGEIPSTFAKLQDMVVMFATDVPITGK 159
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
IPDFIGNWTKL ESLRISD+ VSSSLDF+ +KNL
Sbjct: 160 IPDFIGNWTKL------------------------ESLRISDLSNVSSSLDFIKEMKNLT 195
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
DL LRN+LI+G+IP IGE Q+L+TLDLSFNNLTG+IP LFN+ SL L L N LSG+
Sbjct: 196 DLVLRNSLISGSIPFYIGEFQSLKTLDLSFNNLTGEIPDALFNLSSLTSLDLSYNELSGS 255
Query: 308 LPTQKSENLQNIDLSYNHLSGPFPSWV--------------------TSSLQM------- 340
P+ LQ Y + W +S L M
Sbjct: 256 FPSWLKSGLQLRKKGYTEQTRALVIWWRIYEQVAFEEINLLSLAMLDSSCLYMEKGKALK 315
Query: 341 -------------------NLAVNNFTFDGSNISVFPGLQCLQRNFPCNRNAPRYANFSI 381
NL NN TFD +N S+F GL+CLQRNFPCNR+ P Y N SI
Sbjct: 316 GRTGALGIKKVRMLEIYHRNLVANNLTFDSTNRSIFEGLECLQRNFPCNRDPPPYTNVSI 375
Query: 382 KCGGPQMRA-DNIVYEADNS---SLSASSYVVTSTEKWAVSNVGLFNEKENPAYVLNTLA 437
KCGGP+ R D VYEADNS +++SY V+ E W VSNVGL++++ +
Sbjct: 376 KCGGPEWRTPDGTVYEADNSITTGTASTSYYVSRLENWGVSNVGLYSDR------IAYKT 429
Query: 438 QMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVF 497
+++GT PEL++TSRI+PGSLRYYGLGL+NG Y VSL FAE + D+S + WES+G RVF
Sbjct: 430 EVSGTNHPELFKTSRISPGSLRYYGLGLQNGHYTVSLQFAEMELKDQSAQTWESIGRRVF 489
Query: 498 DIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLWAGKGTCCVPTQGDYG 557
DIYIQGTL+ KDFDI+KEAGG RAI + FNA VS+N+LEIHL WAGKGTCC+P +G YG
Sbjct: 490 DIYIQGTLQLKDFDITKEAGGVERAIERKFNAVVSQNYLEIHLFWAGKGTCCIPFEGYYG 549
Query: 558 PAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIAVPLGILGLI-VISIVFYMRRKKD 616
P+ISALS VS K +P TP K +TG+I GI +GIL I +I VFY++ K
Sbjct: 550 PSISALSVVSDLKR----VPTTTPPKKGYTGLIAGIVASIGILSFILIICAVFYVKWKAS 605
Query: 617 NDDEE-VLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQL 675
N +E+ VL+G+ +PNTF YAELR+AT++F +NKLGEGG+G VYKGTL DGRV+AVK+L
Sbjct: 606 NLNEDIVLLGVGPRPNTFRYAELRTATENFSATNKLGEGGFGSVYKGTLPDGRVVAVKEL 665
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---------------- 719
++AS GK+QF+ EIATISAVQHRNLV+LYG CI+G RRLLVY+
Sbjct: 666 TVASQHGKSQFITEIATISAVQHRNLVKLYGFCIKGNRRLLVYEYLENRSLDHSLFGKNN 725
Query: 720 ------------------------------------GY--LAPEYAMRGHLTEKADVFSF 741
GY LAPEYAMRGHLTEKADVFSF
Sbjct: 726 LHLDWPTRFNVCLATARALAYLHEESXPRIVHRDVQGYGYLAPEYAMRGHLTEKADVFSF 785
Query: 742 GVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGV 801
GVVALE++SGR N+DNSLD + IYLLEWAW LHENN+SL L+DP LT F++ EA+RV+GV
Sbjct: 786 GVVALEILSGRPNTDNSLDAKMIYLLEWAWALHENNRSLDLIDPRLTAFDENEAIRVVGV 845
Query: 802 ALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYLTDWDFKDITASFLNEDTPTPSS 861
ALLCTQASP++RP MSRVVAMLAGDIEV TV SKPSYLTDWDF D T+SFL+EDT T SS
Sbjct: 846 ALLCTQASPVLRPTMSRVVAMLAGDIEVSTVASKPSYLTDWDFNDATSSFLSEDTQT-SS 904
Query: 862 SIKRRKSKEKS-----QRENPVDDHS-EGT-DALVSPVNVTQ--LTDILAEGR 905
+ S S NP S +GT + SPVN+++ L I+ GR
Sbjct: 905 AFNESASNPTSFASNKSTSNPTSFASNKGTSNPTPSPVNISEPMLHGIIGAGR 957
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495319|ref|XP_002271226.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/726 (62%), Positives = 567/726 (78%), Gaps = 17/726 (2%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+QW A +LWNISG PCSGSA++ T NP I C+CT++ TCHIT+L++Y
Sbjct: 23 FQQWGTKAPKLWNISGEPCSGSAIDET--YIWDQTINPTIKCNCTYNTHTTCHITELKIY 80
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
ALNK+G IP+EL L YLT+L +DRN FTG LP FIGNLS+L S+AHN FSG +P++L
Sbjct: 81 ALNKRGRIPKELAALTYLTYLLLDRNSFTGHLPPFIGNLSKLQFFSIAHNAFSGTIPKDL 140
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
G LKEL +L+L +NNFSGALPPE+GNLAKL+E+YI+SCGA GEIPSTFA L+N++ + AS
Sbjct: 141 GKLKELKILALGSNNFSGALPPELGNLAKLQEIYINSCGAGGEIPSTFANLYNLETVWAS 200
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
D FTGKIP+FIGNWTKL +LRL+GNSF+GPIPSSLS LASL++L ISDIY VSSSLDF+
Sbjct: 201 DCQFTGKIPNFIGNWTKLWSLRLEGNSFKGPIPSSLSSLASLQTLHISDIYEVSSSLDFI 260
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
LKNL L LRN LI+G+IPS IGE Q+LQTLDLSFNNL G IP +LF +++L LFLG
Sbjct: 261 KGLKNLTSLVLRNTLISGSIPSYIGEYQSLQTLDLSFNNLIGGIPSSLFKLNNLTALFLG 320
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NN L+GTLP QKSE LQ IDLSYN +SG FPSW+ S LQ+NL NNFTFD SN S+ GL
Sbjct: 321 NNRLTGTLPPQKSEKLQIIDLSYNEISGSFPSWLNSDLQLNLVANNFTFDSSNSSILEGL 380
Query: 361 QCLQRNFPCNRNAPRYANFSIKCGGPQMR-ADNIVYEADNS---SLSASSYVVTSTEKWA 416
CLQR+FPCN+ P+Y NFS+KCGGP++R +D V+EADNS +++ Y V+ E+WA
Sbjct: 381 NCLQRDFPCNKGTPQYTNFSVKCGGPELRTSDGTVFEADNSITIGTTSALYFVSRMERWA 440
Query: 417 VSNVGLFNEKE--NPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSL 474
VSNVGL+N++ N + V L+Q+ GT+ P+L++TSRI+PGSLRYYGLGL NGPY VSL
Sbjct: 441 VSNVGLYNDRSEYNTSSVEKALSQVKGTKNPKLFETSRISPGSLRYYGLGLVNGPYTVSL 500
Query: 475 LFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSEN 534
LFAET+ D ST+ W+S G RVFDIYIQG L +KDFDIS+EAGG +A+ K F A VSEN
Sbjct: 501 LFAETTFKDPSTQTWQSRGRRVFDIYIQGMLEYKDFDISREAGGVEKALEKKFKATVSEN 560
Query: 535 HLEIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMIVGIA 594
+LEIHL WAGKGTCC+P QG YGP+ISAL+ V P ++ +PP K+ TG+I+G A
Sbjct: 561 YLEIHLFWAGKGTCCIPVQGYYGPSISALTVV----PDLTRIPP----KKHKTGLIIGFA 612
Query: 595 VPLGILGLIVISIVFYMRRKKDNDDEEV-LVGIESKPNTFSYAELRSATKDFDPSNKLGE 653
GI+ +++ YM+RK + +E++ L+ I K NTFS AELR+AT+DF P+NKLG+
Sbjct: 613 AAAGIVSFMLVLAACYMKRKGLHANEDIELLEIGPKLNTFSDAELRTATEDFSPANKLGQ 672
Query: 654 GGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713
GG+G VYKGTL DGR +AVKQLSIAS+Q K+QF+ EIATISAVQHRNLV+LYG CI+G+R
Sbjct: 673 GGFGTVYKGTLLDGRAVAVKQLSIASYQAKSQFITEIATISAVQHRNLVKLYGFCIKGSR 732
Query: 714 RLLVYD 719
RLLVY+
Sbjct: 733 RLLVYE 738
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 905 | ||||||
| TAIR|locus:2205250 | 1032 | AT1G56130 [Arabidopsis thalian | 0.787 | 0.690 | 0.493 | 6.5e-234 | |
| TAIR|locus:2203718 | 1035 | AT1G53440 [Arabidopsis thalian | 0.777 | 0.680 | 0.370 | 3.1e-153 | |
| TAIR|locus:2205260 | 1047 | AT1G56120 [Arabidopsis thalian | 0.724 | 0.626 | 0.377 | 3.5e-152 | |
| TAIR|locus:2019367 | 1078 | AT1G29740 [Arabidopsis thalian | 0.758 | 0.636 | 0.360 | 5.9e-135 | |
| TAIR|locus:2019317 | 969 | AT1G29730 [Arabidopsis thalian | 0.603 | 0.563 | 0.332 | 6.4e-132 | |
| TAIR|locus:2203847 | 1021 | RKF1 "receptor-like kinase in | 0.761 | 0.674 | 0.344 | 7.5e-120 | |
| TAIR|locus:2009630 | 953 | AT1G53420 [Arabidopsis thalian | 0.681 | 0.647 | 0.343 | 2.7e-111 | |
| TAIR|locus:2017923 | 390 | AT1G16670 [Arabidopsis thalian | 0.139 | 0.323 | 0.503 | 3.1e-54 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.344 | 0.273 | 0.310 | 6.9e-52 | |
| TAIR|locus:2011339 | 1120 | AT1G35710 [Arabidopsis thalian | 0.316 | 0.255 | 0.318 | 1.9e-51 |
| TAIR|locus:2205250 AT1G56130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1787 (634.1 bits), Expect = 6.5e-234, Sum P(2) = 6.5e-234
Identities = 358/725 (49%), Positives = 462/725 (63%)
Query: 4 WDAPAVRLWNISGNPCSGSALNATDSAFES-PDNNPAIVCDCTFDNGATCHITKLRVYAL 62
W A R WNISG CSG+A++A S +S P NP I CDC+F N C IT ++VYA+
Sbjct: 52 WKIQAPREWNISGELCSGAAIDA--SVLDSNPAYNPLIKCDCSFQNSTICRITNIKVYAI 109
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXX 122
+ G IP EL TL YLT L + +N TG LP IGNL+R+ ++ N SGPVP+
Sbjct: 110 DVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGL 169
Query: 123 XXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
P EIG KL+++YIDS G SG IP +FA L ++ +D
Sbjct: 170 LTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIPLSFANLVQLEQAWIADL 229
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMS 242
T +IPDFIG+WTKLT LR+ G GPIP R+ DI SSSLDF+
Sbjct: 230 EVTDQIPDFIGDWTKLTTLRIIGTGLSGPIPSSFSNLTSLTELRLGDISSGSSSLDFIKD 289
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
+K+L L LRN +TGTIPS IGE +L+ +DLSFN L G IP +LFN+ L +LFLGNN
Sbjct: 290 MKSLSVLVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNN 349
Query: 303 SLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT-SSLQMNLAVNNFTFDGSNISVFPGLQ 361
+L+G+ PTQK+++L+N+D+SYN LSG PSWV+ SL++NL NNFT +G + V PGL
Sbjct: 350 TLNGSFPTQKTQSLRNVDVSYNDLSGSLPSWVSLPSLKLNLVANNFTLEGLDNRVLPGLN 409
Query: 362 CLQRNFPCNRNAPRYANFSIKCGGPQMRA-DNIVYEADNXXXXXXXXXXXXXEKWAVSNV 420
CLQ+NFPCNR Y++FSI CGGP+ R+ ++E ++ ++WA S+V
Sbjct: 410 CLQKNFPCNRGKGIYSDFSINCGGPEKRSVTGALFEREDEDFGPASFFVSAGQRWAASSV 469
Query: 421 GLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETS 480
GLF N Y+ + +Q T EL+Q++R++ S+RYYGLGLENG Y V+L FAE
Sbjct: 470 GLFAGSSNNIYIATSQSQFVNTLDSELFQSARLSASSVRYYGLGLENGGYTVTLQFAEIQ 529
Query: 481 ILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPN-RAIIKNFNAAVSENHLEIH 539
IL ++ W+ LG R FDIY+QG L KDFD+ + AG RA+ + + A VSENHLE+H
Sbjct: 530 ILGSTSTTWKGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQRVYKANVSENHLEVH 589
Query: 540 LLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMXXXXXXXXXX 599
L WAGKGTCC+P QG YGP ISA+SA F P+V+ PP KN TG
Sbjct: 590 LFWAGKGTCCIPIQGAYGPLISAVSATPDFTPTVANKPPSK--GKNRTGTIVGVIVGVGL 647
Query: 600 XXXXXXXXXFYMR--RKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYG 657
F +R RK+ DDEE+L G++ KP F+Y+EL+SAT+DFDPSNKLGEGG+G
Sbjct: 648 LSILAGVVMFTIRKRRKRYTDDEELL-GMDVKPYIFTYSELKSATQDFDPSNKLGEGGFG 706
Query: 658 PVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717
PVYKG L+DGRV+AVK LS+ S QGK QFV EI IS+V HRNLV+LYGCC EG R+LV
Sbjct: 707 PVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLV 766
Query: 718 YDGYL 722
Y+ YL
Sbjct: 767 YE-YL 770
|
|
| TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1177 (419.4 bits), Expect = 3.1e-153, Sum P(2) = 3.1e-153
Identities = 269/727 (37%), Positives = 395/727 (54%)
Query: 13 NISGNPCSGSALN-ATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEE 71
NI C N +S + P +N I CDCTF+ + C +T +++ N +G+IP E
Sbjct: 50 NIERTSCLDRKWNFVAESTSKLPTSN--ITCDCTFNASSVCRVTNIQLRGFNLRGIIPPE 107
Query: 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXXXXX 131
L LT + + NF +G +P+ + + L +L++ N SGP P
Sbjct: 108 FGNLTRLTEIDLVLNFLSGTIPTTLSQIP-LEILAVTGNRLSGPFPPQLGQITTLTDVIM 166
Query: 132 XXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDF 191
PP +GNL L+ L I S +G IP + + L N+ R +GKIPDF
Sbjct: 167 ESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDF 226
Query: 192 IGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSL 251
IGNWT+L L LQG S +GPIP RI+D+ +S + ++ N++ L L
Sbjct: 227 IGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVL 286
Query: 252 RNALITGTIPSGIG-ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
RN LI IP IG + L+ LDLS N L G IP T ++++ N+++L NNSL+G +P
Sbjct: 287 RNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVPQ 346
Query: 311 QKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNFPCN 370
++ QNIDLSYN+ + P P+ + L +NL ++++ +N SV CL+++ PC
Sbjct: 347 FILDSKQNIDLSYNNFTQP-PTLSCNQLDVNL-ISSYP-SVTNNSV---QWCLRKDLPCP 400
Query: 371 RNAPRYANFSIKCGGPQMRADNIVYEADNXXXXXXXXXXXXXEKWAVSNVGLFNEKENPA 430
+A +++ I CGG +++ D Y AD+ E+W S+ G + +
Sbjct: 401 GDA-HHSSLFINCGGNRLKVDKDEY-ADDLNKRGASTFSSVSERWGYSSSGAWLGNDGAT 458
Query: 431 YVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWE 490
Y+ + TPE Y+T+R+ SL+YYGL + G YKV L FAE I+ + + +
Sbjct: 459 YLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAE--IMFSNDQTYS 516
Query: 491 SLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAA-VSENHLEIHLLWAGKGTCC 549
SLG R+FDIY+QG L +DF+I++ AGG + ++ + V+ + LEIHL W GKGT
Sbjct: 517 SLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWTGKGTNV 576
Query: 550 VPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMXXXXXXXXXXXXXXXXXXXF 609
+PT+G YGP ISA++ FK +G P N G+
Sbjct: 577 IPTRGVYGPLISAITVTPNFKVD-TGKPLS---NGVVAGIVIAACVAFGLLVLVILRLTG 632
Query: 610 YMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV 669
Y+ K+ +++EE L G++ + +F+ +++ AT +FDP NK+GEGG+GPVYKG L+DG
Sbjct: 633 YLGGKEVDENEE-LRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMT 691
Query: 670 IAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMR 729
IAVKQLS S QG +FV EI ISA+QH NLV+LYGCCIEG LLVY+ YL R
Sbjct: 692 IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYE-YLENNSLAR 750
Query: 730 GHL-TEK 735
TEK
Sbjct: 751 ALFGTEK 757
|
|
| TAIR|locus:2205260 AT1G56120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 3.5e-152, Sum P(2) = 3.5e-152
Identities = 257/681 (37%), Positives = 365/681 (53%)
Query: 53 HITKLR--VYALNK-KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAH 109
++T+++ + +N G IP+E+ L L L I N F+G LP+ IG+ ++L + +
Sbjct: 120 NLTRMQWMTFGINALSGPIPKEIGLLTDLRLLGISSNNFSGSLPAEIGSCTKLQQMYIDS 179
Query: 110 NVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFA 169
+ SG +P P IG KL L I G SG IPS+F+
Sbjct: 180 SGLSGGIPLSFANFVELEVAWIMDVELTGRIPDFIGFWTKLTTLRILGTGLSGPIPSSFS 239
Query: 170 KLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISD 229
L + LR D DFI + L+ L L+ N+ G IP +S
Sbjct: 240 NLIALTELRLGDISNGSSSLDFIKDMKSLSVLVLRNNNLTGTIPSTIGGYTSLQQVDLSF 299
Query: 230 IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289
+ +L L L L N + G++P+ G Q+L LD+S+N+L+G +P +
Sbjct: 300 NKLHGPIPASLFNLSRLTHLFLGNNTLNGSLPTLKG--QSLSNLDVSYNDLSGSLPSWV- 356
Query: 290 NIDSLNYLFLGNN-SLSGTLPTQKSENLQNIDLSY--NHLSG--PFPSWVTSSLQMNLAV 344
++ L + NN +L G L + L + ++ N G + S + ++ +
Sbjct: 357 SLPDLKLNLVANNFTLEG-LDNRVLSGLHCLQKNFPCNRGEGICKCNKKIPSQIMFSM-L 414
Query: 345 NNFTF-DGSNISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGPQMRA-DNIVYEADNXXX 402
N T+ GSN+ + C + F + Y NFSI CGGP++R+ ++E ++
Sbjct: 415 NVQTYGQGSNVLLEKN--CF-KTFAIDWCLD-Y-NFSINCGGPEIRSVSGALFEKEDADL 469
Query: 403 XXXXXXXXXXEKWAVSNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYG 462
++WA S+VG F N Y+ +LAQ T EL+Q++R++ SLRYYG
Sbjct: 470 GPASFVVSAAKRWAASSVGNFAGSSNNIYIATSLAQFINTMDSELFQSARLSASSLRYYG 529
Query: 463 LGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPN-R 521
LGLENG Y V+L FAE I + W+ +G R F+IY+QG L KDFDI + AGG + R
Sbjct: 530 LGLENGGYTVTLQFAEVQI--EGSNSWKGIGRRRFNIYVQGRLVEKDFDIRRTAGGSSVR 587
Query: 522 AIIKNFNAAVSENHLEIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTP 581
A+ + + VSENHLE+HL WAGKGTCC+P QG YGP I+A+SA F P+V+ PP
Sbjct: 588 AVQREYKTNVSENHLEVHLFWAGKGTCCIPIQGAYGPLIAAVSATPDFTPTVANRPPSKG 647
Query: 582 GNKNHTGMXXXXXXXXXXXXXXXXXXXFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSA 641
++ T + RRK DDEE+L ++ KP TF+Y+EL++A
Sbjct: 648 KSRTGTIVGVIVGVGLLSIFAGVVILVIRKRRKPYTDDEEIL-SMDVKPYTFTYSELKNA 706
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
T+DFD SNKLGEGG+G VYKG L+DGR +AVKQLSI S QGK QFV EI IS+V HRNL
Sbjct: 707 TQDFDLSNKLGEGGFGAVYKGNLNDGREVAVKQLSIGSRQGKGQFVAEIIAISSVLHRNL 766
Query: 702 VRLYGCCIEGARRLLVYDGYL 722
V+LYGCC EG RLLVY+ YL
Sbjct: 767 VKLYGCCFEGDHRLLVYE-YL 786
|
|
| TAIR|locus:2019367 AT1G29740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1037 (370.1 bits), Expect = 5.9e-135, Sum P(2) = 5.9e-135
Identities = 262/726 (36%), Positives = 361/726 (49%)
Query: 9 VRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVI 68
V+ N+S +PC L T + N+ I CDC F+N TCHIT + + G +
Sbjct: 56 VKHLNLSEDPCLTKTLVITQDVLKEGQNS-TIRCDCHFNNNNTCHITHFVLKTFSLPGRL 114
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXX 128
P E L+YL F+ + RN+ G +P +L L +S+ N +G +P+
Sbjct: 115 PPEFSKLRYLEFIDLCRNYLYGSIPMEWASLPYLKSISVCANRLTGDIPKGLGKFINLTQ 174
Query: 129 XXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
P E+GNL LE L S G +P T A+L + LR SD G I
Sbjct: 175 LGLEANQFSGTIPKELGNLVNLEGLAFSSNQLVGGVPKTLARLKKLTNLRFSDNRLNGSI 234
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKD 248
P+FIGN +KL L L + + PIP RISD + + S K+LK
Sbjct: 235 PEFIGNLSKLQRLELYASGLKDPIPYSIFRLENLIDLRISDTAAGLGQVPLITS-KSLKF 293
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L LRN +TG IP+ + +L NL TLDLSFN LTG++P + + Y +L N LSG +
Sbjct: 294 LVLRNMNLTGPIPTSLWDLPNLMTLDLSFNRLTGEVPA---DASAPKYTYLAGNMLSGKV 350
Query: 309 PTQKSENLQ-NIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNF 367
+ NIDLSYN+ + W S + N +N + S S+ L C N
Sbjct: 351 ESGPFLTASTNIDLSYNNFT-----WSQSCKERN-NINTYASSRSTNSLTRLLPCSAINL 404
Query: 368 PCNRNAPRYANFSIKCGGPQMRADN----IVYEADNXXXXXXXXXXXXXEKWAVSNVGLF 423
N N + N CGGP + +N +YE DN + W SN G F
Sbjct: 405 CQNYNRSLHIN----CGGPDVTIENSRGRFLYEGDNYGLTGSATNYYG-KNWGFSNTGDF 459
Query: 424 NEKE--NPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSI 481
+ Y +++ + ++ + P+LYQ +R +P SL Y+ + ENG Y V L FAE
Sbjct: 460 MDDAITEDTYTVSSESAVSA-KYPDLYQNARRSPLSLAYFAICFENGSYNVKLHFAEIQF 518
Query: 482 LDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLL 541
D E + L RVF+IY+QG L W+DF I +EA G ++ +IK N V++N LEI L
Sbjct: 519 SDE--EPFSRLAKRVFNIYVQGKLIWEDFSIREEANGTHKEVIKEVNTTVTDNTLEIRLY 576
Query: 542 WAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLP----PGTPG-NKNHTGMXXXXXXX 596
WAGKGT +P +G+YG ISA+S V S G+P P T +K
Sbjct: 577 WAGKGTTIIPKRGNYGSLISAIS-VCPSSESECGVPVQIHPVTKQQHKQRKYHLILGIAA 635
Query: 597 XXXXXXXXXXXXFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGY 656
Y R N D E K +FS +L+ AT DF+P NK+GEGG+
Sbjct: 636 LIVSLSFLILGALYWRICVSNADGE-------KRGSFSLRQLKVATDDFNPLNKIGEGGF 688
Query: 657 GPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716
G VYKG L +G +IAVK+LS S QG +F+NEI I+ +QH NLV+LYGCC+E + LL
Sbjct: 689 GSVYKGRLPNGTLIAVKKLSSKSCQGNKEFINEIGIIACLQHPNLVKLYGCCVEKTQLLL 748
Query: 717 VYDGYL 722
VY+ YL
Sbjct: 749 VYE-YL 753
|
|
| TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 6.4e-132, Sum P(3) = 6.4e-132
Identities = 192/578 (33%), Positives = 276/578 (47%)
Query: 9 VRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVI 68
V+ N+S +PC L + + N+ I CDC F+N +TCHI + N G +
Sbjct: 56 VKHLNLSEDPCLTKTLVISQGVLKEGQNS-TIRCDCHFNNYSTCHIKHFVLQKFNLPGRL 114
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXX 128
P L ++L + + N+ G +P +L L +S+ N SG +P+
Sbjct: 115 PPMLYKFRHLESIDLYNNYLYGSIPMEWASLPYLKSISVCANRLSGDIPKGLGKFINLTL 174
Query: 129 XXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
P E+GNL L+ L + S G +P T AKL + L SD G I
Sbjct: 175 LVLEANQFSGTIPKELGNLVNLQGLGLSSNQLVGGLPKTLAKLTKLTNLHLSDNRLNGSI 234
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKD 248
P+FIG KL L L + +GPIP RISD + + S +LK
Sbjct: 235 PEFIGKLPKLQRLELYASGLRGPIPDSIFHLENLIDVRISDTVAGLGHVPQITST-SLKY 293
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L LRN ++G IP+ I +L +L TLDLSFN LTG+IP + Y +L N LSG +
Sbjct: 294 LVLRNINLSGPIPTSIWDLPSLMTLDLSFNRLTGEIPAYA---TAPKYTYLAGNMLSGKV 350
Query: 309 PTQKSENLQ-NIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNF 367
T NIDLSYN+ + W + + +N T++ S+ L R
Sbjct: 351 ETGAFLTASTNIDLSYNNFT-----W-SPMCKERKNIN--TYESSHSK-----NRLTRLL 397
Query: 368 PCN--RNAPRYA-NFSIKCGGPQMRADN----IVYEADNXXXXXXXXXXXXXEKWAVSNV 420
PC+ + Y+ + I CGGP + +N +YE DN + W SN
Sbjct: 398 PCSAIKQCQNYSRSLHINCGGPDVTIENSRGRFLYEGDNYGLTGSATNYYR-KNWGYSNT 456
Query: 421 GLFNEKE--NPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAE 478
G F + Y +++ + ++ + P+LYQ +R +P SL YY ENG Y V L FAE
Sbjct: 457 GDFMDDAITEDTYTVSSESAVSA-KYPDLYQNARRSPLSLAYYAFCFENGSYNVKLHFAE 515
Query: 479 TSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEI 538
D E + L RVF+IYIQG L W+DF I +EA G ++ +I+ N V++N LEI
Sbjct: 516 IQFSD--VEPYTKLAKRVFNIYIQGKLIWEDFSIREEANGTHKEVIREVNTTVTDNTLEI 573
Query: 539 HLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGL 576
L WAGKGT +P +G YG ISA+S + + G+
Sbjct: 574 RLYWAGKGTMIIPQRGYYGSLISAVSVCPSSESECGGM 611
|
|
| TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 967 (345.5 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 247/717 (34%), Positives = 354/717 (49%)
Query: 10 RLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIP 69
+ W C + T++ P I C+C+ N CH+ K N G +P
Sbjct: 60 KFWKFDAENCKIEMVGLTETP--PPTAKQEIECECSPTNDTDCHVVKFAFKDHNLPGTLP 117
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXXX 129
+ +V L YL + + N+ G LP + S LT +SL N SG +P+
Sbjct: 118 Q-IVKLPYLREIDLAYNYINGTLPREWAS-SNLTFISLLVNRLSGEIPKEFGNSSLTYLD 175
Query: 130 XXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
P E+GNL L++L + S +G +P++ A+L NM R +D +G IP
Sbjct: 176 LESNAFSGTI-PQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234
Query: 190 DFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDL 249
+I NW +L L + + GPIP RISDI + ++ L +
Sbjct: 235 SYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNLRISDIRGPVQPFPSLKNVTGLTKI 294
Query: 250 SLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP 309
L+N I+G IP+ + L+ L+TLDLSFN L G IP + ++L ++ L N L G P
Sbjct: 295 ILKNCNISGQIPTYLSHLKELETLDLSFNKLVGGIP-SFAQAENLRFIILAGNMLEGDAP 353
Query: 310 TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNFPC 369
+ + +DLSYN+L P MNL +N F + S L C+ ++F C
Sbjct: 354 DELLRDGITVDLSYNNLKWQSPESRACRPNMNLNLNLFQSTSTKKSS-KFLPCI-KDFKC 411
Query: 370 NRNAPRYAN-FSIKCGGPQM----RADNIVYEAD-NXXXXXXXXXXXXXEKWAVSNVGLF 423
PRY++ + CGG M + +YE D N W S+ G F
Sbjct: 412 ----PRYSSCLHVNCGGSDMYVKEKKTKELYEGDGNVEGGAAKYFLKPDANWGFSSTGDF 467
Query: 424 NEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILD 483
+ N T+ + + +LY+++RI P SL Y+ LENG Y ++L FAE I
Sbjct: 468 MDDNNFQNTRFTMF-VPASNQSDLYKSARIAPVSLTYFHACLENGNYTINLDFAE--IRF 524
Query: 484 RSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLWA 543
+ E + LG R+FDIYIQ L KDF+I EA G IIK A V+ + L I L WA
Sbjct: 525 TNDENYNRLGRRLFDIYIQEKLVAKDFNIMDEAKGAQTPIIKPLTAYVTNHFLTIRLSWA 584
Query: 544 GKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPGNKNHTGMXXXXXXXXXXXXXX 603
GKGT +PT+G YGP ISA+S VS KP +PG G+
Sbjct: 585 GKGTTRIPTRGVYGPIISAISIVSDSKPCERPKTGMSPGAYIAIGIGAPCLIIFILGFLW 644
Query: 604 XXXXXFYM-RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKG 662
R++KD +EE+ G TF+ +++ AT DF+P+NK+GEGG+G V+KG
Sbjct: 645 ICGCLPRCGRQRKDPYEEELPSG------TFTLRQIKFATDDFNPTNKIGEGGFGAVFKG 698
Query: 663 TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L+DGRV+AVKQLS S QG +F+NEI IS +QH NLV+L+G C+E A+ LL Y+
Sbjct: 699 VLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYE 755
|
|
| TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 821 (294.1 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 223/649 (34%), Positives = 315/649 (48%)
Query: 83 IDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPP 142
+ R G LP + L L + L+ N +G +P P
Sbjct: 70 LKRENLQGSLPKELVGLPLLQEIDLSRNYLNGSIPPEWGVLPLVNIWLLGNRLTGPI-PK 128
Query: 143 EIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALR 202
E GN+ L L +++ SGE+P L N+Q + S +F G+IP T L R
Sbjct: 129 EFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFR 188
Query: 203 LQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPS 262
+ N G IP I V + SL LKDL + + + G S
Sbjct: 189 VSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAIASLVELKDLRISD--LNGP-ES 245
Query: 263 GIGELQNL---QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNI 319
+L+N+ +TL L NLTG +P L I S +L L N LSG +P NL++
Sbjct: 246 PFPQLRNIKKMETLILRNCNLTGDLPDYLGKITSFKFLDLSFNKLSGAIPNTYI-NLRDG 304
Query: 320 DLSY---NHLSGPFPSW-VTSSLQMNLAVNNFTFDGSN-ISVFPGLQCLQRNFPCNRNAP 374
Y N L+G P W V +++L+ NNF+ D +N + + + RN+ C P
Sbjct: 305 GYIYFTGNMLNGSVPDWMVNKGYKIDLSYNNFSVDPTNAVCKYNNVLSCMRNYQC----P 360
Query: 375 RYAN-FSIKCGGPQMRADNIVYEADNXXXXXXXXXXXXXEKWAVSNVGLF-NEKENPAYV 432
+ N I CGG +M + +YE+D W +NVG+F ++K P V
Sbjct: 361 KTFNALHINCGGDEMSINGTIYESDKYDRLESWYESRNG--WFSNNVGVFVDDKHVPERV 418
Query: 433 -LNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWES 491
+ + + LY +RI+ SL YY L LENG Y V+L FAE I+ ++S
Sbjct: 419 TIESNSSELNVVDFGLYTQARISAISLTYYALCLENGNYNVNLHFAE--IMFNGNNNYQS 476
Query: 492 LGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLWAGKGTCCVP 551
LG R FDIYIQ L KDF+I+KEA +IK F + + LEI L WAG+GT +P
Sbjct: 477 LGRRFFDIYIQRKLEVKDFNIAKEAKDVGNVVIKTFPVEIKDGKLEIRLYWAGRGTTVIP 536
Query: 552 TQGDYGPAISALSAVSAFKPSV-SGLPPGTPGNKNHTGMXXXXXXXXXXXXXXXXXXXFY 610
+ YGP ISA+S S+ PS +G+ GT HT + Y
Sbjct: 537 KERVYGPLISAISVDSSVNPSPRNGMSTGTL----HT-LVVILSIFIVFLVFGTLWKKGY 591
Query: 611 MRRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVI 670
+R K + + +E +FS +++ AT +FD +N++GEGG+GPVYKG L DG +I
Sbjct: 592 LRSKSQMEKD--FKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTII 649
Query: 671 AVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
AVKQLS S QG +F+NEI ISA+ H NLV+LYGCC+EG + LLVY+
Sbjct: 650 AVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYE 698
|
|
| TAIR|locus:2017923 AT1G16670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 3.1e-54, Sum P(2) = 3.1e-54
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
GYLAPEYA+RG LT KAD++SFGV+ +E++SGR+N + L TE YLLE AW L+E N+
Sbjct: 210 GYLAPEYAVRGQLTRKADIYSFGVLLMEIVSGRSNKNTRLPTEYQYLLERAWELYERNEL 269
Query: 780 LGLVDPTLTE-FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG-TVISKPS 837
+ LVD L F+ +EA R + + LLCTQ SP +RP MS VV +L G+ ++ IS+P
Sbjct: 270 VDLVDSGLNGVFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDIDYKKISRPG 329
Query: 838 YLTDW-DFK 845
++D+ D K
Sbjct: 330 LISDFMDLK 338
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 331 (121.6 bits), Expect = 6.9e-52, Sum P(3) = 6.9e-52
Identities = 102/328 (31%), Positives = 147/328 (44%)
Query: 47 DNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLS 106
D G + L +Y + G IP E+ L L L + +N G +P IGN S L ++
Sbjct: 269 DLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMID 328
Query: 107 LAHNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPS 166
L+ N+ SG +P P I N + L +L +D SG IPS
Sbjct: 329 LSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPS 388
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXR 226
L + + A G IP + + T L AL L NS G IP
Sbjct: 389 ELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLR-----N 443
Query: 227 ISDIYFVSSSLD-FV-MSLKNLKDL-SLRNAL--ITGTIPSGIGELQNLQTLDLSFNNLT 281
++ + +S+SL F+ + N L LR ITG IPSGIG L+ + LD S N L
Sbjct: 444 LTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLH 503
Query: 282 GQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFPSWVTSSLQ 339
G++P + + L + L NNSL G+LP S LQ +D+S N SG P+ + +
Sbjct: 504 GKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVS 563
Query: 340 MN-LAVNNFTFDGS---NISVFPGLQCL 363
+N L ++ F GS ++ + GLQ L
Sbjct: 564 LNKLILSKNLFSGSIPTSLGMCSGLQLL 591
|
|
| TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 364 (133.2 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 93/292 (31%), Positives = 137/292 (46%)
Query: 63 NK-KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXX 121
NK G IP L L+ L L + N+ TG +P +GN+ +T L+L+ N +G +P
Sbjct: 184 NKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLG 243
Query: 122 XXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASD 181
PPEIGN+ + L + +G IPS+ L N+ +L
Sbjct: 244 NLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQ 303
Query: 182 AHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVM 241
+ TG IP +GN + L L N G IP + + Y +
Sbjct: 304 NYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELG 363
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN 301
+++++ DL L N +TG+IPS G L+NL L L N LTG IP+ L N++S+ L L
Sbjct: 364 NMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQ 423
Query: 302 NSLSGTLPTQKSE--NLQNIDLSYNHLSGPFPSWVTSSLQMN---LAVNNFT 348
N L+G++P L+++ L NHLSG P V +S + L NNFT
Sbjct: 424 NKLTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFT 475
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| C0LGH2 | Y1561_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5290 | 0.7856 | 0.6889 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00035223001 | SubName- Full=Chromosome chr10 scaffold_76, whole genome shotgun sequence; (992 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 905 | |||
| pfam11721 | 164 | pfam11721, Malectin, Di-glucose binding within end | 1e-49 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-40 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-38 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-37 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-36 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-33 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-26 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-15 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-12 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-12 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 7e-12 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-10 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-09 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 9e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-08 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-08 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-07 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 5e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-06 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-06 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-06 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-06 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-06 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-06 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 5e-06 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-06 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-06 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 7e-06 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 7e-06 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 1e-05 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-05 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-05 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 3e-05 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 4e-05 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 4e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-05 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 4e-05 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 4e-05 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 5e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-05 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-05 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-04 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 1e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-04 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-04 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 2e-04 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-04 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-04 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 4e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-04 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-04 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-04 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 5e-04 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 7e-04 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 7e-04 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 8e-04 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 8e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 9e-04 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 0.001 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 0.001 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 0.001 | |
| pfam12799 | 43 | pfam12799, LRR_4, Leucine Rich repeats (2 copies) | 0.001 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 0.002 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 0.003 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 0.003 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 0.003 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 0.003 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 0.004 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 0.004 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.004 |
| >gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 1e-49
Identities = 77/190 (40%), Positives = 97/190 (51%), Gaps = 31/190 (16%)
Query: 378 NFSIKCGGPQMR-ADNIVYEADN-SSLSASSYVVTSTEKWAVSNVGLFNEKENPAYVLNT 435
+I CGGP+ +D I YEAD + ++ Y V+ T N
Sbjct: 2 VLAINCGGPEHTDSDGITYEADTYFTGGSADYYVSDT---------------------NG 40
Query: 436 LAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTR 495
+ + GT PELYQT R +P S YY LENG Y V L FAE + LG R
Sbjct: 41 SSSIAGTTDPELYQTERYSPSSFSYYIPCLENGNYTVILHFAEIYFGED------GLGRR 94
Query: 496 VFDIYIQGTLRWKDFDISKEAGGPNRAIIKNF-NAAVSENHLEIHLLWAGKGTCCVPTQG 554
VFD+Y+QG L KDFDI EAGG + K + V++ LEIH WAGKGT +P +G
Sbjct: 95 VFDVYVQGKLVLKDFDIVAEAGGKGKTAHKEYIPVTVTDGTLEIHFYWAGKGTLLIPFRG 154
Query: 555 DYG-PAISAL 563
YG P ISA+
Sbjct: 155 VYGNPKISAI 164
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. Length = 164 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-40
Identities = 95/278 (34%), Positives = 145/278 (52%), Gaps = 5/278 (1%)
Query: 63 NKKGVIPEELVTLQY-LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELG 121
G IP+++ T L +L + N FTG +P G++ L L L++N+ SG +P ++G
Sbjct: 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIG 161
Query: 122 NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASD 181
+ L +L L N G +P + NL LE L + S G+IP ++ +++ +
Sbjct: 162 SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY 221
Query: 182 AHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVM 241
+ +G+IP IG T L L L N+ GPIPSSL L +L+ L + +
Sbjct: 222 NNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF 281
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN 301
SL+ L L L + ++G IP + +LQNL+ L L NN TG+IP L ++ L L L +
Sbjct: 282 SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
Query: 302 NSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVTSS 337
N SG +P K NL +DLS N+L+G P + SS
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSS 379
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 4e-38
Identities = 91/268 (33%), Positives = 126/268 (47%), Gaps = 26/268 (9%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
G IP ++ + L L + N G +P+ + NL+ L L+LA N G +PRELG +K
Sbjct: 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKS 213
Query: 126 LNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT 185
L + L NN SG +P EIG L L L + +G IPS+ L N+Q L +
Sbjct: 214 LKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLS 273
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKN 245
G IP I + KL +L L NS G IP + V+ L+N
Sbjct: 274 GPIPPSIFSLQKLISLDLSDNSLSGEIP------------------------ELVIQLQN 309
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
L+ L L + TG IP + L LQ L L N +G+IP+ L ++L L L N+L+
Sbjct: 310 LEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369
Query: 306 GTLPTQ--KSENLQNIDLSYNHLSGPFP 331
G +P S NL + L N L G P
Sbjct: 370 GEIPEGLCSSGNLFKLILFSNSLEGEIP 397
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 2e-37
Identities = 101/295 (34%), Positives = 155/295 (52%), Gaps = 14/295 (4%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122
N G IP E+ L L L + N TGP+PS +GNL L L L N SGP+P + +
Sbjct: 223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS 282
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L++L L L++N+ SG +P + L LE L++ S +G+IP L +Q+L+
Sbjct: 283 LQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLD---- 238
F+G+IP +G LT L L N+ G IP L +L L I F S+SL+
Sbjct: 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL----ILF-SNSLEGEIP 397
Query: 239 -FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYL 297
+ + ++L+ + L++ +G +PS +L + LD+S NNL G+I +++ SL L
Sbjct: 398 KSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457
Query: 298 FLGNNSLSGTLP-TQKSENLQNIDLSYNHLSGPFPSWVTS---SLQMNLAVNNFT 348
L N G LP + S+ L+N+DLS N SG P + S +Q+ L+ N +
Sbjct: 458 SLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS 512
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (377), Expect = 1e-36
Identities = 98/293 (33%), Positives = 140/293 (47%), Gaps = 27/293 (9%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
G IPE ++ LQ L L + N FTG +P + +L RL +L L N FSG +P+ LG
Sbjct: 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNN 357
Query: 126 LNLLSLANNNFSGALPPEI---GNLAKL---------------------EELYIDSCGAS 161
L +L L+ NN +G +P + GNL KL + + S
Sbjct: 358 LTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417
Query: 162 GEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLAS 221
GE+PS F KL + L S+ + G+I + L L L N F G +P S
Sbjct: 418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDS-FGSKR 476
Query: 222 LESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLT 281
LE+L +S F + + SL L L L ++G IP + + L +LDLS N L+
Sbjct: 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536
Query: 282 GQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPS 332
GQIP + + L+ L L N LSG +P E+L +++S+NHL G PS
Sbjct: 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 5e-33
Identities = 97/274 (35%), Positives = 147/274 (53%), Gaps = 9/274 (3%)
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLA-KLEELYID 156
N SR+ + L+ SG + + L + ++L+NN SG +P +I + L L +
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLS 126
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
+ +G IP + N++ L S+ +G+IP+ IG+++ L L L GN G IP+SL
Sbjct: 127 NNNFTGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
+ L SLE L ++ V + +K+LK + L ++G IP IG L +L LDL
Sbjct: 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLV 244
Query: 277 FNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWV 334
+NNLTG IP +L N+ +L YLFL N LSG +P + L ++DLS N LSG P V
Sbjct: 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304
Query: 335 TS--SLQ-MNLAVNNFTFD-GSNISVFPGLQCLQ 364
+L+ ++L NNFT ++ P LQ LQ
Sbjct: 305 IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-26
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 25/264 (9%)
Query: 47 DNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLS 106
+ G ++T L + N G IPE L + L L + N G +P +G L +
Sbjct: 351 NLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVR 410
Query: 107 LAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPS 166
L N FSG +P E L + L ++NNN G + ++ L+ L + G +P
Sbjct: 411 LQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPD 470
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226
+F ++ L S F+G +P +G+ ++L L+L N G IP LS
Sbjct: 471 SFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELS--------- 520
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPR 286
S K L L L + ++G IP+ E+ L LDLS N L+G+IP+
Sbjct: 521 ---------------SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK 565
Query: 287 TLFNIDSLNYLFLGNNSLSGTLPT 310
L N++SL + + +N L G+LP+
Sbjct: 566 NLGNVESLVQVNISHNHLHGSLPS 589
|
Length = 968 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 2e-15
Identities = 40/145 (27%), Positives = 54/145 (37%), Gaps = 36/145 (24%)
Query: 649 NKLGEGGYGPVYKGTLSDG----RVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
KLGEG +G VYKG L +AVK L AS + + F+ E + + H N+VR
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNSL 759
L G C E LV EY G +L + VF ++L
Sbjct: 61 LLGVCTEEEPLYLVL------EYMEGGDLLDYLRKSRPVFPS------------PEKSTL 102
Query: 760 DTEKIYLLEWAWN-------LHENN 777
+ LL +A L
Sbjct: 103 SLKD--LLSFAIQIAKGMEYLASKK 125
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 67.9 bits (167), Expect = 2e-12
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 650 KLGEGGYGPVYKGTLSD-----GRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
KLGEG +G VYKG L +AVK L AS Q +F+ E + + H N+V+
Sbjct: 6 KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C E +V EY G L
Sbjct: 66 LLGVCTEEEPLYIVM------EYMEGGDL 88
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 36/141 (25%)
Query: 650 KLGEGGYGPVYKGTLSDG-----RVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
KLGEG +G VYKGTL +AVK L AS Q +F+ E + + H N+V+
Sbjct: 6 KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
L G C E ++V EY G L L+ + R N L
Sbjct: 66 LLGVCTEEEPLMIVM------EYMPGGDL-------------LDYL--RKNRPKELSLSD 104
Query: 764 IYLLEWAWN-------LHENN 777
LL +A L N
Sbjct: 105 --LLSFALQIARGMEYLESKN 123
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-12
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 12 WNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATC-HITKLRVYALNKKGVIPE 70
WN G+PC P +P DC FD+ I L + +G IP
Sbjct: 392 WN--GDPCV-------------PQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPN 436
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130
++ L++L + + N G +P +G+++ L +L L++N F+G +P LG L L +L+
Sbjct: 437 DISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILN 496
Query: 131 LANNNFSGALPPEIG 145
L N+ SG +P +G
Sbjct: 497 LNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 7e-12
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 650 KLGEGGYGPVYKGTL-----SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
KLGEG +G VYKGTL +AVK L AS + + +F+ E + + + H N+VR
Sbjct: 6 KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65
Query: 704 LYGCCIEGARRLLV 717
L G C +G +V
Sbjct: 66 LLGVCTQGEPLYIV 79
|
Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
LGEGG+G VY G+ +A+K + S + + EI + + H N+V+LYG
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ LV EY G L +
Sbjct: 61 EDENHLYLVM------EYCEGGSLKD 80
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-10
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL 251
G W + L L +G IP+ +SKL L+S+ +S
Sbjct: 415 KGKWF-IDGLGLDNQGLRGFIPNDISKLRHLQSINLS----------------------- 450
Query: 252 RNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP 309
I G IP +G + +L+ LDLS+N+ G IP +L + SL L L NSLSG +P
Sbjct: 451 -GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
F+ K+G+GG+G VYK G+ +A+K + + S + K + +NEI + +H N+V
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSF-------GVVALEVISG 751
+ YG ++ ++ E+ G L + + V E++ G
Sbjct: 61 KYYGSYLKKDEL------WIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKG 110
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 1e-09
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 153 LYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212
L +D+ G G IP+ +KL ++Q + S G IP +G+ T L L L NSF G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 213 PSSLSKLASLESLRISD 229
P SL +L SL L ++
Sbjct: 483 PESLGQLTSLRILNLNG 499
|
Length = 623 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 1e-09
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 25/135 (18%)
Query: 633 FSYAELRSATKDFDPSN------KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ 685
A L+ + DP K+GEG G VYK T + G+ +A+K++ + Q K
Sbjct: 3 ELKAALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK-QNKEL 61
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYL--APEYAMRGHLTEKADVFSF-- 741
+NEI + +H N+V Y + L EY G LT+
Sbjct: 62 IINEILIMKDCKHPNIVDYYDSYL--------VGDELWVVMEYMDGGSLTDIITQNFVRM 113
Query: 742 -----GVVALEVISG 751
V EV+ G
Sbjct: 114 NEPQIAYVCREVLQG 128
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSI--ASHQGKNQFVNEIATISAVQHRNLVRLYG 706
KLG G +G VYK G+++AVK L + EI + + H N+VRL
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 707 CCIEGARRLLVYD----GYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+ LV + G L + G L+E +AL+++ G
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKK----IALQILRG 110
|
Length = 260 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 649 NKLGEGGYGPVYKGTLSD-GRVIAVKQ--LSIASHQGKNQFVNEIATISAVQHRNLVRLY 705
LG G +G VY D G ++AVK LS S + EI +S++QH N+VR Y
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 706 GCCIEGARRLLVYDGYLAPEYAMRGHLT 733
G + + L + EY G L+
Sbjct: 66 GSERDEEKNTL----NIFLEYVSGGSLS 89
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQHRNLV 702
++ KLGEG +G VY G+++A+K + + + + EI + ++H N+V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
RLY + + LV EY G L +
Sbjct: 61 RLYDVFEDEDKLYLVM------EYCEGGDLFD 86
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQLS-IASHQGKNQFVNEIATISAVQHRNLVR 703
LGEG +G V+ G D ++AVK L AS+ + F E ++ QH N+V+
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
YG C EG ++V+ EY G L +
Sbjct: 73 FYGVCTEGDPPIMVF------EYMEHGDLNK 97
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 4e-08
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L L N G +P +I L L+ + + G IP + + ++++L S F G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSL 216
P+ +G T L L L GNS G +P++L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 5e-08
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 19/229 (8%)
Query: 92 LPSFIGNLSRLTLLSLAHN-VFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150
LPS + NL L L L+ N + +P+ L NL LN L L+ N S LPPEI L+ L
Sbjct: 155 LPSPLRNLPNLKNLDLSFNDLSD--LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSAL 211
Query: 151 EELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
EEL + + + E+ S+ + L N+ L S+ +P+ IGN + L L L N Q
Sbjct: 212 EELDLSN-NSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNN--QI 267
Query: 211 PIPSSLSKLASLESL-----RISDIYFVSSSLDFVMSLKNLKDLSL------RNALITGT 259
SSL L +L L +S+ + + L ++ L L+L N+++
Sbjct: 268 SSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTLKALELKLNSILLNN 327
Query: 260 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
GE + + L + + + +LN + N + G+L
Sbjct: 328 NILSNGETSSPEALSILESLNNLWTLDNALDESNLNRYIVKNPNAIGSL 376
|
Length = 394 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L +L L N + I S L +L +L SL + + + NLK+L L +
Sbjct: 93 LPLPSLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNK 151
Query: 256 ITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KS 313
I ++PS + L NL+ LDLSFN+L+ +P+ L N+ +LN L L N +S LP +
Sbjct: 152 IE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELL 208
Query: 314 ENLQNIDLSYNHL 326
L+ +DLS N +
Sbjct: 209 SALEELDLSNNSI 221
|
Length = 394 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 24/103 (23%)
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKN 245
G IP+ I L ++ L GNS +G IP SL + SLE L
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVL-------------------- 471
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTL 288
DLS N+ G+IP +G+L +L+ L+L+ N+L+G++P L
Sbjct: 472 --DLS-YNSF-NGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 2e-07
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 269 NLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHL 326
NL++LDLS N LT + +L L L N+L+ P +L+++DLS N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 4e-07
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 81 LKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGAL 140
L +D G +P+ I L L ++L+ N G +P LG++ L +L L+ N+F+G++
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 141 PPEIGNLAKLEELYIDSCGASGEIPS 166
P +G L L L ++ SG +P+
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-07
Identities = 25/60 (41%), Positives = 29/60 (48%)
Query: 245 NLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
NLK L L N +T L NL+ LDLS NNLT P + SL L L N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 650 KLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LGEG +G V+ D ++AVK L AS + F E ++ +QH+++VR
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
YG C EG L+V+ EY G L
Sbjct: 72 FYGVCTEGRPLLMVF------EYMRHGDL 94
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-07
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 105 LSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEI 164
L L + G +P ++ L+ L ++L+ N+ G +PP +G++ LE L + +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 165 PSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSF 208
P + +L +++IL + +G++P +G L SF
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG------GRLLHRASF 520
|
Length = 623 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 651 LGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKNQFV-----NEIATISAVQHRNLVRL 704
LG G +G VY+G L DG AVK++S+A Q EIA +S +QH N+V+
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 705 YGCCIEGARRL----LVYDGYLAPEYAMRGHLTE 734
G E LV G LA G E
Sbjct: 68 LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPE 101
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
++F KLG G +G V++G + +A+K L + F E+ + ++H++L+
Sbjct: 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65
Query: 703 RLYGCCIEG 711
L+ C G
Sbjct: 66 SLFAVCSVG 74
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 648 SNKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNL 701
+LGEG +G V + G +AVK L+ + Q ++ F EI + + H N+
Sbjct: 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
V+ G C + R L L EY G L +
Sbjct: 69 VKYKGVCEKPGGRSLR----LIMEYLPSGSLRD 97
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 2e-06
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
Y+APE +TEK+D++ FG++ +E+++G++ +D ++EWA + +
Sbjct: 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG-SIVEWARYCYSDCHLD 902
Query: 781 GLVDPTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+DP++ N E + V+ +AL CT P RP + V+ L
Sbjct: 903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSI--ASHQGKNQFVNEIATISAVQHRN 700
DF+ NK+G+G +G V+K +D RV A+KQ+ + + + + + ++E ++ +
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
++R Y ++ + + EYA G L
Sbjct: 61 IIRYYESFLDKGKL------NIVMEYAENGDL 86
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI-ASHQGKNQF-VNEIAT---ISAVQH 698
++ ++GEG YG VYK L+ GR +A+K++ + S +G + EIA + + +H
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60
Query: 699 RNLVRLYGCC 708
N+VRL C
Sbjct: 61 PNIVRLLDVC 70
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 650 KLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LGEG +G V+ D ++AVK L AS + F E ++ +QH ++V+
Sbjct: 12 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 71
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
YG C+EG ++V+ EY G L +
Sbjct: 72 FYGVCVEGDPLIMVF------EYMKHGDLNK 96
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 4e-06
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ-FVNEIATISAVQHRN 700
+ FD KLGEG YG VYK G+V+A+K + + + Q + EI+ +
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPV---EEDLQEIIKEISILKQCDSPY 59
Query: 701 LVRLYGC 707
+V+ YG
Sbjct: 60 IVKYYGS 66
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 644 DFDPSNK---LGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHR 699
++D + + LG+G YG VY LS IA+K++ + EIA S ++HR
Sbjct: 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHR 65
Query: 700 NLVRLYGCCIEG 711
N+V+ G E
Sbjct: 66 NIVQYLGSDSEN 77
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 5e-06
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS--IASHQGKNQFVNEIATISAVQHRN 700
D++ +G+G +G V K SDG+++ K++ + + K Q V+E+ + ++H N
Sbjct: 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPN 60
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+VR Y I+ + + L Y+ EY G L
Sbjct: 61 IVRYYDRIIDRSNQTL----YIVMEYCEGGDL 88
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDG----RVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
+++G G +G V G G RV+ VK+L + A+ + F+ E+ + H N+++
Sbjct: 1 DEIGNGWFGKVLLGEAHRGMSKARVV-VKELRASATPDEQLLFLQEVQPYRELNHPNVLQ 59
Query: 704 LYGCCIEGARRLLVYD--------GYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
G CIE LLV + YL RG + + A +A EV SG
Sbjct: 60 CLGQCIESIPYLLVLEFCPLGDLKNYLRSN---RGMVAQMAQKDVLQRMACEVASG 112
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 6e-06
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 22/83 (26%)
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L L N + G IP+ I +L++LQ+++LS N++ G IP +L +I SL
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSL-------------- 468
Query: 309 PTQKSENLQNIDLSYNHLSGPFP 331
+ +DLSYN +G P
Sbjct: 469 --------EVLDLSYNSFNGSIP 483
|
Length = 623 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-06
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 648 SNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKN--QFVNEIATISAVQHRNLVRL 704
NK+G G +G VY L G ++AVK++ I + K + +E+ + ++H NLV+
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKY 64
Query: 705 YG 706
YG
Sbjct: 65 YG 66
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 7e-06
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNL 701
K+ +G+G +G V G G+ +AVK L F+ E + ++ ++H NL
Sbjct: 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLK--DDSTAAQAFLAEASVMTTLRHPNL 62
Query: 702 VRLYGCCIEGARRLLVYDG-YLAPEYAMRGHLTE 734
V+L G ++G + Y+ EY +G L +
Sbjct: 63 VQLLGVVLQG-------NPLYIVTEYMAKGSLVD 89
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 27/142 (19%)
Query: 644 DFDPSNKLGEGGYGPVYK-GTLSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAVQHRN 700
DF KLG+G YG VYK LSD + A+K+ L S + + VNEI +++V H N
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLD 760
++ ++G + +V EYA G L++ IS R +
Sbjct: 61 IISYKEAFLDGNKLCIVM------EYAPFGDLSKA-------------ISKRKKKRKLIP 101
Query: 761 TEKIY-----LLEWAWNLHENN 777
++I+ LL LHE
Sbjct: 102 EQEIWRIFIQLLRGLQALHEQK 123
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKNQF----VNEIATIS 694
S +D++ KLGEG +G VYK + GRV+A+K++ + H K+ F + EI +
Sbjct: 5 SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILM--HNEKDGFPITALREIKILK 62
Query: 695 AVQHRNLVRL 704
++H N+V L
Sbjct: 63 KLKHPNVVPL 72
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 645 FDPSNKLGEGGYGPVYKG---TLSDGRVIAVKQLSIASHQGKN---QFVNEIATISAVQH 698
++ +G G YG VYK DG+ A+K+ Q EIA + ++H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA 727
N+V L +E A + + YL +YA
Sbjct: 62 ENVVSLVEVFLEHADKSV----YLLFDYA 86
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSI------ASHQGKNQFVNEIATISAVQHRNLV 702
LG+G YG VY G + G++IAVKQ+ + A+ + + E+ + +++H N+V
Sbjct: 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65
Query: 703 RLYGCCIE 710
+ G C++
Sbjct: 66 QYLGTCLD 73
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRN 700
D+ K+GEG YG VYKG G+++A+K++ + S + + + EI+ + +QH N
Sbjct: 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60
Query: 701 LVRLYGCCIEGARRLLVYD 719
+V L ++ +R L+++
Sbjct: 61 IVCLQDVLMQESRLYLIFE 79
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 4e-05
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 650 KLGEGGYGPVYKG-TLSDGRVIAVKQLSIASH-QG-KNQFVNEIATISAVQHRNLVRLYG 706
K+GEG YG VYK G ++A+K++ + + +G + + EI+ + + H N+VRL
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65
Query: 707 CCIEGARRLLVYD 719
+ LV++
Sbjct: 66 VVHSENKLYLVFE 78
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 4e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 648 SNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRL 704
+ +G G +G VYKG L G +A+KQ+S+ + + EI + ++H N+V+
Sbjct: 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKY 64
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHL 732
G IE + L Y+ EYA G L
Sbjct: 65 IG-SIETSDSL-----YIILEYAENGSL 86
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 4e-05
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG G +G V+ GT + +AVK L + F+ E + ++H LV+LY C
Sbjct: 13 KLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS 71
Query: 710 EG 711
E
Sbjct: 72 EE 73
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 650 KLGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGKNQ-FVNEIATISAVQHRNLVRL 704
KLG+G +G V +G S G+VI AVK L F+ E A + ++ H NL+RL
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61
Query: 705 YG 706
YG
Sbjct: 62 YG 63
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 5e-05
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 645 FDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKNQF----VNEIATISAVQHR 699
++ ++GEG YG VYK G ++A+K++ + K F + EI + ++H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRM--ENEKEGFPITAIREIKLLQKLRHP 58
Query: 700 NLVRLY 705
N+VRL
Sbjct: 59 NIVRLK 64
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 6e-05
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 237 LDFVMSLKN-LKDLSLRNALITGTIPSGI--GELQNLQTLDLSFNNLTGQIPRTLFNIDS 293
L F S+ + LK LS N+ + GI + ++DLS N++G+I +F +
Sbjct: 35 LSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPY 94
Query: 294 LNYLFLGNNSLSGTLP---TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFD 350
+ + L NN LSG +P S +L+ ++LS N+ +G P +L+ L ++N
Sbjct: 95 IQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLE-TLDLSNNMLS 153
Query: 351 G---SNISVFPGLQCL 363
G ++I F L+ L
Sbjct: 154 GEIPNDIGSFSSLKVL 169
|
Length = 968 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 651 LGEGGYGPVYKGTLS--DGRV--IAVK--QLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
LGEG +G V +G LS DG +AVK +L I ++ +F++E A + H N+++L
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 705 YGCCIEGARR 714
G C E +
Sbjct: 67 IGVCFEASSL 76
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 649 NKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
+KLG G YG VY+G +AVK L + + + +F+ E A + ++H NLV+L G
Sbjct: 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 70
Query: 708 C 708
C
Sbjct: 71 C 71
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 8e-05
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRV------IAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
LG G +G VY+G +AVK L S Q ++ F+ E +S H+N+
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71
Query: 702 VRLYGCCIEGARRLLV 717
VRL G E R ++
Sbjct: 72 VRLIGVSFERLPRFIL 87
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-04
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 445 PE-LYQTSRITPG---SLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIY 500
PE LYQ++ ++ L Y N Y V L FAE +D S + G RVFD+
Sbjct: 251 PESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAE---IDNSIT---AEGKRVFDVL 304
Query: 501 IQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHL 540
I G +KD DI K +G A++ N AVS L I L
Sbjct: 305 INGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVL 344
|
Length = 623 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT------LSDGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
+D +LGEG +G V+ D ++AVK L + + F E ++ +
Sbjct: 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 64
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
QH ++V+ YG C +G ++V+ EY G L +
Sbjct: 65 QHEHIVKFYGVCGDGDPLIMVF------EYMKHGDLNK 96
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNL 701
D + LG+G G VYK G++ A+K++ + + + Q + E+ T+ + + +
Sbjct: 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV 61
Query: 702 VRLYG 706
V+ YG
Sbjct: 62 VKCYG 66
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 643 KDFDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
+D++ ++G G YG VYK ++ G ++A+K + + EI+ + +H N+
Sbjct: 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62
Query: 702 VRLYG 706
V +G
Sbjct: 63 VAYFG 67
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 651 LGEGGYGPVYKGT---LSDGR---VIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
+G+G +G V++ L ++AVK L AS + F E A ++ H N+V+
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
L G C G L++ EY G L E
Sbjct: 73 LLGVCAVGKPMCLLF------EYMAYGDLNE 97
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
D K+GEG G V T S GR +AVK++ + Q + NE+ + QH N+V
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79
Query: 703 RLYG 706
+Y
Sbjct: 80 EMYS 83
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNLVRLYGCC 708
K+G+G +G VYKG L +AVK K +F+ E + H N+V+L G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 709 IE 710
++
Sbjct: 62 VQ 63
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVI----AVKQLSIASHQGKNQ-FVNEIATISAVQHRNLVRL 704
LG G +G VYKG + +G + A+K L + N+ ++E +++V H ++VRL
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 705 YGCCIEGARRLLV 717
G C+ ++ L+
Sbjct: 75 LGICL-SSQVQLI 86
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 649 NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLY 705
++G+G +G VY SDG++ +K++ ++ S + + +NE+ + + H N+++ Y
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65
Query: 706 GCCIEG 711
E
Sbjct: 66 ESFEEK 71
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 649 NKLGEGGYGPVYKGT--LSDGRVI--AVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
+LG G +G V KG + G+ + AVK L GK +F+ E + ++ + H +VR
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADV 738
L G C +G +LV + LAP + +L ++ ++
Sbjct: 61 LIGVC-KGEPLMLVME--LAPLGPLLKYLKKRREI 92
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 651 LGEGGYGPVYK---GTLSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLY 705
LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71
Query: 706 GCCIEGARR-LLVYDGYLAPEYAMRGHL 732
G C RR L + YL P ++R +L
Sbjct: 72 GVCYSAGRRNLRLVMEYL-PYGSLRDYL 98
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 651 LGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNLVRLYGCCI 709
LG+G +G V+KGTL D +AVK Q K +F++E + H N+V+L G C
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62
Query: 710 E 710
+
Sbjct: 63 Q 63
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-04
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 651 LGEGGYGPVYKGTL------SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LGEG +G VYKG L +A+K L A + + +F E +S +QH N+V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 704 LYGCC 708
L G C
Sbjct: 73 LLGVC 77
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRNLVRLYG 706
++GEG +G V+K G +A+K++++ +G NQ + EI + A QH +V+L
Sbjct: 7 RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66
Query: 707 CCIEGARRLLVYDGYLAP 724
G+ +LV Y+
Sbjct: 67 VFPHGSGFVLVM-EYMPS 83
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 5e-04
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF----VNEIATISAVQHRNLVRL 704
KLGEG YG VYK G ++A+K+ I + + EI+ + ++H N+V+L
Sbjct: 6 KLGEGTYGVVYKARDKKTGEIVALKK--IRLDNEEEGIPSTALREISLLKELKHPNIVKL 63
Query: 705 Y 705
Sbjct: 64 L 64
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 645 FDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIAS-HQGKNQF-VNEIATISAVQHRNL 701
++ K+GEG YG V+K ++A+K++ + +G + EI + ++H+N+
Sbjct: 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 61
Query: 702 VRLY 705
VRLY
Sbjct: 62 VRLY 65
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 651 LGEGGYGPVYKGTLSDGRVI---AVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLY 705
LGEG +G V +G L+ I AVK + IA + F++E + H N++RL
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 706 GCCIEGARRLLVYDGYLAP 724
G C++ +GY +P
Sbjct: 67 GVCLQTVES----EGYPSP 81
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 7e-04
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
++G G +G V+ G + R +A+K + + F+ E + + H LV+LYG
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 708 CIEGARRLLVYD----GYLAPEY--AMRGHLTEKA 736
C E + LV++ G L+ +Y A RG +++
Sbjct: 68 CTERSPICLVFEFMEHGCLS-DYLRAQRGKFSQET 101
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 8e-04
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 651 LGEGGYGPVYKGTLSD------GRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRNLV 702
LGEG +G V K +AVK L A+ + + V+E+ + + +H+N++
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79
Query: 703 RLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
L G C + +G Y+ EYA G+L +
Sbjct: 80 NLLGVCTQ--------EGPLYVVVEYAAHGNLRD 105
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 651 LGEGGYGPV----YKGTLSD-GRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRL 704
LGEG +G V Y G ++AVK L Q + + EI + + H N+V+
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHL 732
GCC E + L L EY G L
Sbjct: 72 KGCCSEQGGKGLQ----LIMEYVPLGSL 95
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 9e-04
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFV-NEIATISAV- 696
DF +GEG + V + A+K L + K ++V E ++ +
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDK-RQLIKEKKVKYVKIEKEVLTRLN 59
Query: 697 QHRNLVRLYGC 707
H +++LY
Sbjct: 60 GHPGIIKLYYT 70
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 650 KLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
KLGEG Y VYKG + G ++A+K++ + + +G + + EI+ + ++H N+VRL+
Sbjct: 7 KLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLH 64
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 650 KLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
K+GEG G V T+ S G+++AVK++ + Q + NE+ + QH N+V +Y
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 709 IEG 711
+ G
Sbjct: 87 LVG 89
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 651 LGEGGYGPVYKGTLSD------GRV-IAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLV 702
LG G +G VY+GT +D G + +AVK L A+ Q K +F+ E +S H N+V
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62
Query: 703 RLYGCCIE 710
+L G C+
Sbjct: 63 KLLGVCLL 70
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) | Back alignment and domain information |
|---|
Score = 36.7 bits (86), Expect = 0.001
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLT 281
NL+ L L N IT +P + L NL+TLDLS N +T
Sbjct: 1 TNLETLDLSNNQIT-DLP-PLSNLPNLETLDLSGNKIT 36
|
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains. Length = 43 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 651 LGEGGYGPVYKGTLSD--GR----VIAVKQLSIASHQGK-NQFVNEIATISAVQHRNLVR 703
LGEG +G V K T GR +AVK L + + ++E + V H ++++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 704 LYGCCIEGARRLLVYDGYLAPEYA----MRGHLTEKADVFSFGVVALEVISGRANSDNSL 759
LYG C + LL+ EYA +R L E V + + + ++ ++
Sbjct: 68 LYGACSQDGPLLLIV------EYAKYGSLRSFLRESRKVGPSYLGSDG--NRNSSYLDNP 119
Query: 760 DTEKIY---LLEWAWNLHENNQSL 780
D + L+ +AW + Q L
Sbjct: 120 DERALTMGDLISFAWQISRGMQYL 143
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSI---ASHQGK--NQFVNEIATISAVQHRNLVRL 704
LG+G +G VY D GR +AVKQ+ + K N EI + +QH +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69
Query: 705 YGC 707
YGC
Sbjct: 70 YGC 72
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 16/77 (20%)
Query: 650 KLGEGGYGPVY-------------KGTLSDGR--VIAVKQL-SIASHQGKNQFVNEIATI 693
KLGEG +G V+ DG+ ++AVK L + + +N F+ EI +
Sbjct: 12 KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71
Query: 694 SAVQHRNLVRLYGCCIE 710
S +++ N++RL G C+
Sbjct: 72 SRLKNPNIIRLLGVCVS 88
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI---ASHQGKNQFVNEIATISAVQ 697
+F K+G+G + VYK L DGRV+A+K++ I + + + EI + +
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 698 HRNLVRLYGCCIE 710
H N+++ IE
Sbjct: 61 HPNVIKYLASFIE 73
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 231
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
+GEG +G V +G + G+ +AVK +I F+ E A ++ + H+NLVRL G
Sbjct: 13 IIGEGEFGAVLQGEYT-GQKVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLG--- 66
Query: 710 EGARRLLVYDG-YLAPEYAMRGHL 732
+++++G Y+ E +G+L
Sbjct: 67 -----VILHNGLYIVMELMSKGNL 85
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 705 YGCCIEGARRLLVYDG---YLAPEYAMRGH-LTEKADVFSFGVVALEVISGRA 753
G R+ V G ++APE + H KAD++SFG+ A+E+ +G A
Sbjct: 155 GGDRTRKVRKTFV--GTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAA 205
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 651 LGEGGYGPVYKGTL-------SDGRVIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLV 702
LG+G +G VY+G + RV A+K ++ AS + + +F+NE + + ++V
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRV-AIKTVNENASMRERIEFLNEASVMKEFNCHHVV 72
Query: 703 RLYGCCIEGARRLLV 717
RL G G L+V
Sbjct: 73 RLLGVVSTGQPTLVV 87
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 905 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.96 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.94 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.94 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.94 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.94 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.93 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.92 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.91 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.9 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.9 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.89 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.89 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.89 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.89 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.88 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.88 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.88 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.87 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.87 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.86 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.86 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.86 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.86 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.86 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.86 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.86 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.86 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.85 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.85 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.85 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.85 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.85 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.85 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.84 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.84 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.84 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.84 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.84 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.84 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.84 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.84 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.84 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.84 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.84 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.84 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.84 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.84 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.84 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.84 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.84 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.83 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.83 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.83 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.83 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.83 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.83 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.83 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.83 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.83 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.83 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.83 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.83 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.83 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.83 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.83 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.83 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.83 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.83 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.83 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.83 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.83 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.83 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.83 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.83 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.82 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.82 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.82 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.82 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.82 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.82 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.82 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.82 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.82 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.82 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.82 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.82 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.82 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.82 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.82 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.82 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.82 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.82 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.82 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.82 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.82 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.82 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.82 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.82 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.82 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.82 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.82 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.82 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.82 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.82 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.81 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.81 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.81 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.81 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.81 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.81 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.81 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.81 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.81 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.81 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.81 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.81 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.81 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.81 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.81 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.81 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.81 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.81 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.81 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.81 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.81 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.81 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.81 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.8 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.8 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.8 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.8 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.8 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.8 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.8 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.8 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.8 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.8 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.8 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.8 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.8 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.8 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.8 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.8 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.8 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.8 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.8 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.8 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.8 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.8 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.8 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.8 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.8 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.8 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.8 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.8 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.8 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.8 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.8 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.8 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.8 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.8 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.8 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.79 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.79 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.79 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.79 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.79 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.79 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.79 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.79 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.79 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.79 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.79 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.79 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.79 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.79 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.79 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.79 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.79 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.79 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.79 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.79 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.79 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.79 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.79 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.79 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.79 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.79 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.79 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.79 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.79 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.79 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.79 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.79 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.79 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.78 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.78 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.78 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.78 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.78 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.78 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.78 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.78 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.78 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.78 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.78 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.78 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.78 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.78 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.78 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.78 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.78 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.78 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.78 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.78 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.78 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.78 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.77 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.77 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.77 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.77 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.77 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.77 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.77 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.77 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.77 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.77 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.77 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.77 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.77 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.77 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.77 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.77 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.77 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.77 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.77 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.77 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.77 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.77 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.77 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.77 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.77 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.77 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.77 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.76 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.76 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.76 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.76 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.76 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.76 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.76 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.76 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.76 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.76 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.76 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.76 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.76 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.76 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.76 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.76 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.76 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.76 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.76 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.75 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.75 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.75 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.75 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.75 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.75 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.75 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.75 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.75 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.75 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.75 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.75 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.75 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.75 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.74 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.74 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.74 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.74 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.74 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.74 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.74 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.74 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.74 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.74 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.74 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.73 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.73 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.73 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.73 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.73 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.73 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.73 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.73 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.73 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.73 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.72 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.72 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.72 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.72 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.71 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.71 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.71 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.71 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.71 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.71 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.7 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.7 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.7 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.7 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.7 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.7 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.69 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.69 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.69 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.69 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.69 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.69 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.69 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.68 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.68 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.68 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.67 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.67 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.66 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.65 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.65 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.65 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.64 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.64 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.64 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.63 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.62 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.61 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.6 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.6 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.6 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.59 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.58 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.56 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.54 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.54 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.51 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.51 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.5 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.49 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.49 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.48 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.46 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.46 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.45 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.45 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.43 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.41 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.41 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.4 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.4 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.38 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.37 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.36 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.35 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.35 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.34 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.31 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.29 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.28 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.26 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.26 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.23 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.21 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.19 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.18 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.17 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.17 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.16 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.16 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.15 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 98.96 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.88 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.87 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 98.86 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.86 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.83 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.8 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 98.78 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.76 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.76 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.72 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.72 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.71 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.69 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.67 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.6 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.57 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.53 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.5 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.49 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.42 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 98.24 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 98.24 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.17 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.05 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.04 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 98.01 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.0 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.99 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 97.9 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 97.85 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 97.8 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 97.78 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 97.75 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.73 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.72 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 97.64 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.63 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 97.62 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.52 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.49 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 97.47 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 97.44 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 97.42 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.41 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 97.38 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 97.37 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 97.35 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 97.34 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 97.17 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 97.06 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 96.98 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 96.84 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 96.83 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 96.83 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 96.8 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 96.75 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 96.67 | |
| smart00090 | 237 | RIO RIO-like kinase. | 96.66 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.66 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 96.64 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.61 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 96.54 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 96.23 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 96.08 | |
| PF13306 | 129 | LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_ | 96.08 | |
| PF13306 | 129 | LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_ | 95.95 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 95.89 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 95.74 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 95.73 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-70 Score=690.26 Aligned_cols=758 Identities=24% Similarity=0.366 Sum_probs=469.2
Q ss_pred CcCCccCCCCCCCCCCcCCCCCCCCCCCCCCceeeCCCCCCCceeeEEEEEeccCcccCCCCccccCCCCCCEEECCCCC
Q 002581 8 AVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNF 87 (905)
Q Consensus 8 ~~~~w~~~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~ 87 (905)
.+.+|+...++|. | .|+.|+. ..+++.|++.+++++|.++..+..+++|++|+|++|+
T Consensus 47 ~~~~w~~~~~~c~----w------------~gv~c~~------~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 47 YLSNWNSSADVCL----W------------QGITCNN------SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred cCCCCCCCCCCCc----C------------cceecCC------CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 4567986677773 3 4788863 1378889998888888888888889999999999998
Q ss_pred CCCCCchhhc-CCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCch
Q 002581 88 FTGPLPSFIG-NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPS 166 (905)
Q Consensus 88 l~~~~p~~~~-~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~ 166 (905)
+++.+|..+. ++++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|.
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCCh
Confidence 8888887655 888888888888888877764 4577777888887777777777777777778888777777777777
Q ss_pred hhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCCChhhhhCCCcc
Q 002581 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNL 246 (905)
Q Consensus 167 ~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 246 (905)
.++++++|++|++++|.+++.+|..++++++|++|+|++|.+++.+|..++++++|++|++++|.+.+..+..+..+++|
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 262 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCC
Confidence 77777777777777777777777777777777777777777777777777777777777777777666566667777777
Q ss_pred cccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCC--CCCCCEEEeecC
Q 002581 247 KDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYN 324 (905)
Q Consensus 247 ~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N 324 (905)
++|+|++|.+++.+|..+.++++|+.|+|++|.+++.+|..+.++++|+.|++++|.+++.+|..+ .++|+.|+|++|
T Consensus 263 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 342 (968)
T PLN00113 263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342 (968)
T ss_pred CEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCC
Confidence 777777777777777777777777777777777777777777777777777777777776666543 356777777777
Q ss_pred CCCCCCCcccc--cccc-cccccccceecCCC-CCCCCCcccccCCCCC------------------------CCC--CC
Q 002581 325 HLSGPFPSWVT--SSLQ-MNLAVNNFTFDGSN-ISVFPGLQCLQRNFPC------------------------NRN--AP 374 (905)
Q Consensus 325 ~lsg~ip~~~~--~~l~-l~l~~N~~~~~~~~-~~~~p~l~~l~~~~~~------------------------~~~--~~ 374 (905)
.+++.+|.++. ..++ ++++.|++++..+. ....+.+..+...... ..+ +.
T Consensus 343 ~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~ 422 (968)
T PLN00113 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS 422 (968)
T ss_pred CCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECCh
Confidence 77777766554 3455 66666666543211 0001111111100000 000 00
Q ss_pred Cc----cccccccCCCccccCCceeccCCCCCCccceeecCCCcceecccccc------cCCCCCceeeeccccccCCCC
Q 002581 375 RY----ANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNVGLF------NEKENPAYVLNTLAQMTGTRT 444 (905)
Q Consensus 375 ~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~g~ip 444 (905)
.+ ....+++++|.+.+ . .+.. .........+.++++... ....++..+++++|+++|.+|
T Consensus 423 ~~~~l~~L~~L~Ls~N~l~~--~----~~~~----~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 423 EFTKLPLVYFLDISNNNLQG--R----INSR----KWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVP 492 (968)
T ss_pred hHhcCCCCCEEECcCCcccC--c----cChh----hccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccC
Confidence 00 00011222222111 0 0000 000001111111111100 112345567777777777777
Q ss_pred hhhhhccccCCCccccccccccCCCceE------EEeeeeecccCCCccccccccceEEEEEecceeecccccchh--hh
Q 002581 445 PELYQTSRITPGSLRYYGLGLENGPYKV------SLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISK--EA 516 (905)
Q Consensus 445 ~~l~~~~~l~~~~l~~~~l~~~~~~~~~------~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~l~~~~~~~--~~ 516 (905)
..+..+..|..++++.|.+. +.++. .+....+......+.++..++ +-..++.+|++. ..
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------~l~~L~~L~Ls~N~l~ 560 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLS---GEIPDELSSCKKLVSLDLSHNQLSGQIPASFS---------EMPVLSQLDLSQNQLS 560 (968)
T ss_pred hhhhhhhccCEEECcCCcce---eeCChHHcCccCCCEEECCCCcccccCChhHh---------CcccCCEEECCCCccc
Confidence 77777766666666555431 00000 000000000000111122111 112366677765 35
Q ss_pred CCCCceeee---ceeeeeecCceEEEeecCCCCcc--ccCCCCCCCCcccccccccCCCCCCCCCCCCCCC-CCCccceE
Q 002581 517 GGPNRAIIK---NFNAAVSENHLEIHLLWAGKGTC--CVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPG-NKNHTGMI 590 (905)
Q Consensus 517 g~~~~~~~~---~~~~~~s~n~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 590 (905)
|.+|..+.. +..+++++|.+++.++..|.... .....|+.+.|... .+ ...++.... ......++
T Consensus 561 ~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~-------~~--~~~~~c~~~~~~~~~~~~ 631 (968)
T PLN00113 561 GEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGD-------TT--SGLPPCKRVRKTPSWWFY 631 (968)
T ss_pred ccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCc-------cc--cCCCCCccccccceeeee
Confidence 777765422 34778999998876654332111 11111111111100 00 000000001 11111222
Q ss_pred EeehhHHHHHHHHHHHHhheeecccCC--chhhh---hhccC----CCCCccCHHHHHHHhcCCCCCCccccccceeEEE
Q 002581 591 VGIAVPLGILGLIVISIVFYMRRKKDN--DDEEV---LVGIE----SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYK 661 (905)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~----~~~~~~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~ 661 (905)
++++++++++++++++++++++|++.. +..+. ..... .....++++++. ..|...++||+|+||+||+
T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~ 708 (968)
T PLN00113 632 ITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYK 708 (968)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEE
Confidence 222222222222222222222222211 11000 00000 011224444443 4577889999999999999
Q ss_pred EEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---------------------
Q 002581 662 GTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--------------------- 719 (905)
Q Consensus 662 g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--------------------- 719 (905)
|+. .+|..||||++...... ..+|++.+++++|||||+++|+|.+.+..++|||
T Consensus 709 ~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~ 784 (968)
T PLN00113 709 GKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRK 784 (968)
T ss_pred EEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHH
Confidence 996 57899999999643222 2356889999999999999999999999999998
Q ss_pred ----------------------------------------------------------CCCChhhhccCCCCccCceEee
Q 002581 720 ----------------------------------------------------------GYLAPEYAMRGHLTEKADVFSF 741 (905)
Q Consensus 720 ----------------------------------------------------------gY~APE~~~~~~~t~k~DVySf 741 (905)
+|||||++.+..+++|+|||||
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~ 864 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGF 864 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchhhH
Confidence 4999999999999999999999
Q ss_pred chhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 002581 742 GVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT---EFNDKEALRVIGVALLCTQASPMMRPPMSR 818 (905)
Q Consensus 742 GvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~---~~~~~~~~~~~~l~~~C~~~~P~~RPsm~e 818 (905)
||++|||+||+.|++.... ....+++|++..........++|+.+. ....+++.++++++.+||+.+|++||||+|
T Consensus 865 Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 943 (968)
T PLN00113 865 GLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAND 943 (968)
T ss_pred HHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHH
Confidence 9999999999999875443 235678898776665556667787773 234567788999999999999999999999
Q ss_pred HHHHHhcCcc
Q 002581 819 VVAMLAGDIE 828 (905)
Q Consensus 819 v~~~L~~~~~ 828 (905)
|+++|+....
T Consensus 944 vl~~L~~~~~ 953 (968)
T PLN00113 944 VLKTLESASR 953 (968)
T ss_pred HHHHHHHhhc
Confidence 9999996544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=346.70 Aligned_cols=197 Identities=53% Similarity=0.876 Sum_probs=178.5
Q ss_pred CCCccCHHHHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEE
Q 002581 629 KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708 (905)
Q Consensus 629 ~~~~~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~ 708 (905)
....|+|.|+..||++|+..++||+|+||.||||.+++|+.||||++.....+..++|.+|++++++++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999998754433156699999999999999999999999
Q ss_pred EeCC-eeEEEEc--------------------------------------------------------------------
Q 002581 709 IEGA-RRLLVYD-------------------------------------------------------------------- 719 (905)
Q Consensus 709 ~~~~-~~~lv~e-------------------------------------------------------------------- 719 (905)
.+.+ +.+||||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9999 5999999
Q ss_pred ----------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC
Q 002581 720 ----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN 777 (905)
Q Consensus 720 ----------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 777 (905)
||+||||+.++.+|+|+|||||||||+||+|||+|.+...+.+...+++|++..+.++
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence 4999999999999999999999999999999999998766555667999999999999
Q ss_pred ccccccCCCCC--CCCH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 778 QSLGLVDPTLT--EFND-KEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 778 ~~~~~~d~~l~--~~~~-~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.+.+++||.+. ++.. +++.++.++|++|++.+|.+||+|.||+++|+.
T Consensus 301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~ 351 (361)
T KOG1187|consen 301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG 351 (361)
T ss_pred chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence 99999999984 4454 688999999999999999999999999999964
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=377.59 Aligned_cols=404 Identities=28% Similarity=0.386 Sum_probs=321.9
Q ss_pred ceeeEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeE
Q 002581 50 ATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129 (905)
Q Consensus 50 ~~~~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L 129 (905)
...+++.|++.+|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|
T Consensus 138 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 138 SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCC
Q 002581 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 130 ~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~ 209 (905)
+|++|.+++.+|..++++++|++|+|++|.+++.+|..++++++|+.|++++|++++.+|..+.++++|+.|++++|.+.
T Consensus 218 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred ECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCcccc
Q 002581 210 GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289 (905)
Q Consensus 210 g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~ 289 (905)
+.+|..+.++++|+.|++++|.+....+..+..+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..+.
T Consensus 298 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred cCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 99999999999999999999988877777888999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCEEECcCCcCccCCCCCC--CCCCCEEEeecCCCCCCCCcccc--cccc-cccccccceecCCC-CCCCCCcccc
Q 002581 290 NIDSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFTFDGSN-ISVFPGLQCL 363 (905)
Q Consensus 290 ~l~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~~~~~~-~~~~p~l~~l 363 (905)
.+++|+.|++++|++.+.+|..+ .++|+.|+|++|+++|.+|..+. ..++ ++++.|++++.... ...+|.++.+
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 457 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEE
Confidence 88999999999999988888654 46888999999999888887665 5566 88888888764321 1223444433
Q ss_pred cCCCCCCCCC-CCc----cccccccCCCccccCCceeccCCCCCCccceeecCCCcceecccc-------cccCCCCCce
Q 002581 364 QRNFPCNRNA-PRY----ANFSIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNVG-------LFNEKENPAY 431 (905)
Q Consensus 364 ~~~~~~~~~~-~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 431 (905)
........+. +.. ....+++++|.+.+ . .+..+.. ......+.++.+. .+....++..
T Consensus 458 ~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~--~----~~~~~~~----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 527 (968)
T PLN00113 458 SLARNKFFGGLPDSFGSKRLENLDLSRNQFSG--A----VPRKLGS----LSELMQLKLSENKLSGEIPDELSSCKKLVS 527 (968)
T ss_pred ECcCceeeeecCcccccccceEEECcCCccCC--c----cChhhhh----hhccCEEECcCCcceeeCChHHcCccCCCE
Confidence 3221111110 100 11123444444321 0 0111110 0001111111110 1112345778
Q ss_pred eeeccccccCCCChhhhhccccCCCccccccc
Q 002581 432 VLNTLAQMTGTRTPELYQTSRITPGSLRYYGL 463 (905)
Q Consensus 432 ~~~~~n~~~g~ip~~l~~~~~l~~~~l~~~~l 463 (905)
+++++|.++|.+|..+..+..|..+++++|.+
T Consensus 528 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 559 (968)
T PLN00113 528 LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL 559 (968)
T ss_pred EECCCCcccccCChhHhCcccCCEEECCCCcc
Confidence 88899999999998888888888777777665
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-30 Score=298.82 Aligned_cols=174 Identities=28% Similarity=0.464 Sum_probs=147.9
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
.+.+....+.||+|+||+||+|+.. +.+.||||.++..... .+++|.||+++|+.++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3455566788999999999999853 3468999999866544 67899999999999999999999999999999
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.+||+|
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence 999998
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~ 772 (905)
+||+||.++.++||++||||||||||||++| |+.|+++....+. -.
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV-------Ie 716 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV-------IE 716 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH-------HH
Confidence 7999999999999999999999999999999 9999887655442 23
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccC
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~ 829 (905)
..+++++ -+.+++|+.++.+||+.||+.+|.+||+++||-..|+...+.
T Consensus 717 ~i~~g~l--------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 717 CIRAGQL--------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred HHHcCCc--------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 3344433 345667888899999999999999999999999999965554
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=261.78 Aligned_cols=163 Identities=26% Similarity=0.441 Sum_probs=135.1
Q ss_pred CCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 647 PSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 647 ~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
..+.||+|-||+||.|.+.....||||.++.. ....++|.+|+++|.+++|+|||+++|+|..++..+||+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 35789999999999999987779999999754 3345789999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPI 368 (468)
T KOG0197|consen 289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPI 368 (468)
T ss_pred HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|.|||.+..++++.|||||||||+||||+| |+.|+......+. + ..+++|-. -..++.|+..+
T Consensus 369 kWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev---~----~~le~GyR--------lp~P~~CP~~v 433 (468)
T KOG0197|consen 369 KWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV---L----ELLERGYR--------LPRPEGCPDEV 433 (468)
T ss_pred eecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH---H----HHHhccCc--------CCCCCCCCHHH
Confidence 5999999999999999999999999999999 7777765443321 1 22222211 12344566778
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.+||..||..+|++|||++.....|+.
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~~~l~~ 460 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLREVLED 460 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence 999999999999999999988888873
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-28 Score=271.26 Aligned_cols=186 Identities=23% Similarity=0.377 Sum_probs=150.0
Q ss_pred CccCHHHHHHHhcCC---------CCCCccccccceeEEEEEeC----CCcEEEEEEccccC-cccHHHHHHHHHHHhhC
Q 002581 631 NTFSYAELRSATKDF---------DPSNKLGEGGYGPVYKGTLS----DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV 696 (905)
Q Consensus 631 ~~~~~~~l~~~t~~f---------~~~~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~ 696 (905)
..++|+|--+|...| .++++||.|.||.||+|.++ ....||||.|+... +..+++|+.|+.+|+++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 346777665555444 34689999999999999974 24679999998654 34567899999999999
Q ss_pred CCCCcceEEeEEEeCCeeEEEEc---------------------------------------------------------
Q 002581 697 QHRNLVRLYGCCIEGARRLLVYD--------------------------------------------------------- 719 (905)
Q Consensus 697 ~H~niv~l~g~~~~~~~~~lv~e--------------------------------------------------------- 719 (905)
.||||++|.|+.......++|.|
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn 767 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN 767 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc
Confidence 99999999999999999999987
Q ss_pred -------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHH
Q 002581 720 -------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLL 767 (905)
Q Consensus 720 -------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~ 767 (905)
+|.|||.+...++|.+|||||||||+||.++ |.+|+.+....+.+.
T Consensus 768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIk-- 845 (996)
T KOG0196|consen 768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-- 845 (996)
T ss_pred eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHH--
Confidence 6999999999999999999999999999987 999998765433221
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccCCc
Q 002581 768 EWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGT 831 (905)
Q Consensus 768 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~~~ 831 (905)
.++++ -++ ..+.+|+..+.++|+.||++|-.+||++.|+|.+|.+.+..+.
T Consensus 846 -----aIe~g-------yRL-PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 846 -----AIEQG-------YRL-PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred -----HHHhc-------cCC-CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 11111 112 2244677889999999999999999999999999998776544
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=256.22 Aligned_cols=166 Identities=27% Similarity=0.475 Sum_probs=131.8
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEccccCcc--cHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-eeEEEEc-----
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ--GKNQFVNEIATISAVQHRNLVRLYGCCIEGA-RRLLVYD----- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-~~~lv~e----- 719 (905)
.+.||+|+||+||+|.+.....||||++...... ..++|.+|+.+|++++|||||+++|+|.+.. ..++|+|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4559999999999999975444999999754322 2568999999999999999999999999988 7899998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~ 205 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVA 205 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCC
Confidence
Q ss_pred ---CCCChhhhc--cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ---GYLAPEYAM--RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ---gY~APE~~~--~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|||||.+. ..+|+.|+||||||||||||+||+.||...... .... ..... -..|.++ ..+
T Consensus 206 GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~---~~~~---~v~~~-----~~Rp~~p---~~~ 271 (362)
T KOG0192|consen 206 GTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV---QVAS---AVVVG-----GLRPPIP---KEC 271 (362)
T ss_pred CCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH---HHHH---HHHhc-----CCCCCCC---ccC
Confidence 599999999 669999999999999999999999999865431 1111 11111 1223332 224
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
...+..++.+||+.||.+||++.+++.+|+...
T Consensus 272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 555777888999999999999999999998543
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=261.07 Aligned_cols=296 Identities=21% Similarity=0.221 Sum_probs=164.1
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
..+.|++++|.++..-+..|-++++|+.++|.+|.++ .||....-..+|+.|+|.+|.|+..-.+++..++.|++||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3455666666665555555566666666666666665 455554445556666666666665555556666666666666
Q ss_pred cccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCC
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~ 212 (905)
.|.++..--.+|..-.++++|+|++|.++..--+.|..+.+|..|.|+.|+++...+..|.+|++|+.|+|..|++.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 66665332334444455666666666666555555666666666666666666554555555666666666666554322
Q ss_pred CccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCC
Q 002581 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID 292 (905)
Q Consensus 213 p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~ 292 (905)
-..|..|.+|+.|.|..|.+.......|..+.++++|+|..|+++..-..|+.+|+.|+.|+||+|.+...-++++...+
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 34455555555555555555544444555555566666666655554455555566666666666665555555555555
Q ss_pred CCCEEECcCCcCccCCCCCC--CCCCCEEEeecCCCCCCCCcccc--cccc-ccccccccee
Q 002581 293 SLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFTF 349 (905)
Q Consensus 293 ~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~~ 349 (905)
+|+.|+|++|+++..-+..+ ...|+.|+|++|+++-.--..+. ++++ |||+.|.++.
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~ 379 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSW 379 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEE
Confidence 66666666665553222222 24555556666555422111111 3444 5566655554
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=269.14 Aligned_cols=172 Identities=30% Similarity=0.477 Sum_probs=136.8
Q ss_pred hcCCCCCCccccccceeEEEEEeCC--C----cEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSD--G----RVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~--g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
.++....+.||+|+||.||+|.+.+ | ..||||.+... +.+...+|++|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3445557899999999999999653 3 35999999754 455678899999999999999999999999999899
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++++|
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 99988
Q ss_pred ------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccc
Q 002581 720 ------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSL 780 (905)
Q Consensus 720 ------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 780 (905)
.|||||+++.+.+|+|+|||||||+|||++| |..||......+. +..| .++.
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v--~~~~-----~~gg-- 921 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV--LLDV-----LEGG-- 921 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--HHHH-----HhCC--
Confidence 6999999999999999999999999999999 6666654433221 1112 1221
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 781 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
++ +.+..|+..+.++|..||+.+|++||+++.+++.+...+.
T Consensus 922 -----RL-~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 922 -----RL-DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred -----cc-CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 11 1234566678899999999999999999999998875443
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=249.00 Aligned_cols=296 Identities=22% Similarity=0.218 Sum_probs=253.4
Q ss_pred eeEEEEEeccCcccCCCCccccC-C-CCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeE
Q 002581 52 CHITKLRVYALNKKGVIPEELVT-L-QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129 (905)
Q Consensus 52 ~~l~~L~l~~~~l~g~ip~~l~~-l-~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L 129 (905)
|....|+.+++.+...--..+.. + +.-+.||+++|+++..-+..|.++++|+.++|..|.++ .||...+-..+|+.|
T Consensus 52 c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L 130 (873)
T KOG4194|consen 52 CNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKL 130 (873)
T ss_pred CCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEE
Confidence 34566666666543221111111 1 23467999999999999999999999999999999998 789877777889999
Q ss_pred ecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCC
Q 002581 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 130 ~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~ 209 (905)
+|.+|.|+..-.+++.-++.|+.|||+.|.++..--.+|..-.++++|+|++|.++..--..|.++.+|..|.|+.|+++
T Consensus 131 ~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 131 DLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc
Confidence 99999999777788999999999999999999766677888889999999999999888889999999999999999999
Q ss_pred CCCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCcccc
Q 002581 210 GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289 (905)
Q Consensus 210 g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~ 289 (905)
...+..|.+|++|+.|+|..|.+.....-.|.++++|+.|.|..|.++..-...|..+.++++|+|+.|+++..--.++.
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lf 290 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLF 290 (873)
T ss_pred ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccc
Confidence 77778899999999999999988766666789999999999999999977777899999999999999999988888999
Q ss_pred CCCCCCEEECcCCcCccCCCCC--CCCCCCEEEeecCCCCCCCCcccc--cccc-cccccccce
Q 002581 290 NIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFT 348 (905)
Q Consensus 290 ~l~~L~~L~Ls~N~l~g~~p~~--~~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~ 348 (905)
++++|+.|+|++|.+...-+.. +.++|++||||+|+++..-+..+. ..++ |+|++|.++
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 9999999999999999766654 468999999999999977676665 5666 999999876
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.4e-27 Score=255.82 Aligned_cols=293 Identities=28% Similarity=0.435 Sum_probs=244.0
Q ss_pred eeEEEEEeccCcccC-CCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEe
Q 002581 52 CHITKLRVYALNKKG-VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130 (905)
Q Consensus 52 ~~l~~L~l~~~~l~g-~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~ 130 (905)
.-++.+++++|.++| .+|.....++.++.|.|...++. .+|..++.|.+|++|.++||++. .+-.+++.|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 457888899999984 58888999999999999988886 78999999999999999999988 5677889999999999
Q ss_pred cccccCC-CCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCC-CCCCcccCCeeecccccC
Q 002581 131 LANNNFS-GALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPD-FIGNWTKLTALRLQGNSF 208 (905)
Q Consensus 131 Ls~N~l~-~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~-~~~~l~~L~~L~L~~N~l 208 (905)
+..|++. .-+|..|..|..|..|+|++|++. +.|..+.+-+++..|+|++|++. .||. -|-+++.|-.|||++|++
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchh
Confidence 9999874 358888999999999999999987 68899999999999999999987 4554 456889999999999998
Q ss_pred CCCCCccccCCCCCCEEEecCcccCCCChhhhhCCCccccccccccccc-CCCCcccCCCCCCCEEeccCCcCCccCCcc
Q 002581 209 QGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALIT-GTIPSGIGELQNLQTLDLSFNNLTGQIPRT 287 (905)
Q Consensus 209 ~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~-~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~ 287 (905)
. .+|..+..|..|+.|.|++|.+.......+..+++|+.|.+++.+-+ ..+|.++..+.+|..+|||.|.+. .+|+.
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 6 68888999999999999998876665566667788888888876554 357888999999999999999998 78999
Q ss_pred ccCCCCCCEEECcCCcCccCCC-CCCCCCCCEEEeecCCCCCCCCcccc--cccc-cccccccceecC
Q 002581 288 LFNIDSLNYLFLGNNSLSGTLP-TQKSENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFTFDG 351 (905)
Q Consensus 288 l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~~~~ 351 (905)
+.++.+|+.|+||+|+++..-- .....+|++|+||+|+|+ .+|+.++ +.+. |.+.+|.+++++
T Consensus 241 ly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeG 307 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEG 307 (1255)
T ss_pred HhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccC
Confidence 9999999999999999884221 122368999999999998 6788776 5566 888888888764
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-25 Score=244.36 Aligned_cols=178 Identities=21% Similarity=0.394 Sum_probs=138.0
Q ss_pred HHHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 636 ~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
+++...-+.+.....||+|+||+||||.|-. .||||+++... ....+.|.+||.++++-||.||+=+.|||.+...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 4555555566678899999999999999863 59999997653 3356789999999999999999999999998776
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
++|..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 55543
Q ss_pred -------------CCCChhhhccC---CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcccccc
Q 002581 720 -------------GYLAPEYAMRG---HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLV 783 (905)
Q Consensus 720 -------------gY~APE~~~~~---~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 783 (905)
-|||||+++.. .|+..+||||||||+|||+||.-||..... +.+. | .-| ...+
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-dqIi---f-----mVG--rG~l 610 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-DQII---F-----MVG--RGYL 610 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-hheE---E-----Eec--cccc
Confidence 49999999854 699999999999999999999999983332 2211 1 111 1122
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 784 DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 784 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
.|++......+..+|.+++..||..++++||.+.+|+.+|+..+
T Consensus 611 ~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 611 MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 33343334566777888999999999999999999999888544
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-25 Score=242.71 Aligned_cols=176 Identities=25% Similarity=0.398 Sum_probs=144.3
Q ss_pred HHHHHHhcCCCCCCccccccceeEEEEEeCC-CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 636 ~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
++++-.+.++...++||-|.||.||.|+|+. .-.||||.++.. .-..++|+.|+.+|+.++|||+|+|+|+|......
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 5555556677788999999999999999875 578999999744 34578999999999999999999999999999999
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
|+|.|
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99988
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|.|||.+....++.|+|||+|||+|||+.| |..|+.+.. + .-|+.+++.+-.
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid------l-SqVY~LLEkgyR------- 484 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID------L-SQVYGLLEKGYR------- 484 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc------H-HHHHHHHhcccc-------
Confidence 5999999999999999999999999999999 667765332 1 124444443321
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 787 l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
.+.++.|+..+.++|+.||+.+|.+||+++|+-+.++...
T Consensus 485 -M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 485 -MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred -ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 1335567778999999999999999999999998887544
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-24 Score=235.47 Aligned_cols=163 Identities=21% Similarity=0.408 Sum_probs=128.6
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA 712 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~ 712 (905)
+.|++|. +.+-+|.|+.|.||.|++. ++.||||+++.. -..+|+-|++++|+||+.+.|+|....
T Consensus 121 iPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 121 IPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred CCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCc
Confidence 4556553 3577999999999999997 588999998632 236788999999999999999999999
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
.+++|||
T Consensus 186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 9999999
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|||||++.....++|+||||||||||||+||..||.+..... +-| |.....+. -.
T Consensus 266 STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIw-------GVGsNsL~---Lp 331 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIW-------GVGSNSLH---LP 331 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEE-------eccCCccc---cc
Confidence 6999999999999999999999999999999999986422110 111 00011111 12
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+..|+.-+.-++..||+..|..||++++++..|+
T Consensus 332 vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 332 VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 33445555666778999999999999999999886
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-24 Score=240.51 Aligned_cols=178 Identities=28% Similarity=0.408 Sum_probs=137.0
Q ss_pred HHHHhcCCCCCCccccccceeEEEEEeCC--C--cE-EEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEE
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGTLSD--G--RV-IAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709 (905)
Q Consensus 638 l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~--g--~~-vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~ 709 (905)
++...++....++||+|+||.||+|++.. + .. ||||....+ .....++|++|+++|++++|||||+++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33344555566899999999999999643 2 23 899999742 3445788999999999999999999999999
Q ss_pred eCCeeEEEEc----------------------------------------------------------------------
Q 002581 710 EGARRLLVYD---------------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~~~~~lv~e---------------------------------------------------------------------- 719 (905)
.....++|+|
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 9999999999
Q ss_pred ---------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcccccc
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLV 783 (905)
Q Consensus 720 ---------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 783 (905)
.|+|||.+..+.||.|+|||||||++||+++ |..|+.+.... .+..|+. .++ .
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI~---~~~-----~ 380 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKIV---KNG-----Y 380 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHHH---hcC-----c
Confidence 6999999999999999999999999999999 78888754322 2333331 111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccC
Q 002581 784 DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 784 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~ 829 (905)
....+...+ ..+..++..||+.+|++||+|.+|.+.|+.....
T Consensus 381 r~~~~~~~p---~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 381 RMPIPSKTP---KELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred cCCCCCCCH---HHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 111222233 3455566699999999999999999999855443
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-26 Score=250.26 Aligned_cols=265 Identities=28% Similarity=0.395 Sum_probs=137.2
Q ss_pred EEEEEeccCccc-CCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcc-cccCCCCCCeEec
Q 002581 54 ITKLRVYALNKK-GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPR-ELGNLKELNLLSL 131 (905)
Q Consensus 54 l~~L~l~~~~l~-g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~-~l~~L~~L~~L~L 131 (905)
++.+.+..|++. ..||+.+..|..|++||||+|+++ ..|..+...+++-+|+|++|+|. .||. -|-+|+-|-+|||
T Consensus 80 LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 80 LRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred hHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcc
Confidence 344444445442 235666666666666666666665 55666666666666666666666 3443 3456666666666
Q ss_pred ccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCcccc-CCCCCCCCCcccCCeeecccccCCC
Q 002581 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT-GKIPDFIGNWTKLTALRLQGNSFQG 210 (905)
Q Consensus 132 s~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~-~~ip~~~~~l~~L~~L~L~~N~l~g 210 (905)
|+|++. .+|+.+..|..|+.|.|++|.+.-..-..+-.+++|+.|.+++.+-+ ..+|.++..+.+|..+|++.|.+.
T Consensus 158 S~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 158 SNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred ccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 666665 56666666666666666666543222222223334444444433221 235556666666666666666664
Q ss_pred CCCccccCCCCCCEEEecCcccCCC----------------------ChhhhhCCCccccccccccccc-CCCCcccCCC
Q 002581 211 PIPSSLSKLASLESLRISDIYFVSS----------------------SLDFVMSLKNLKDLSLRNALIT-GTIPSGIGEL 267 (905)
Q Consensus 211 ~~p~~l~~l~~L~~L~l~~n~~~~~----------------------~~~~~~~l~~L~~L~L~~N~l~-~~ip~~~~~l 267 (905)
.+|..+.++.+|+.|+|++|.++.. .+..+..++.|+.|++.+|+++ ..||++|+++
T Consensus 236 ~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 4566666666666666666654422 1223333444444444444432 1244444444
Q ss_pred CCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCC--CCCCCEEEeecC
Q 002581 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYN 324 (905)
Q Consensus 268 ~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N 324 (905)
.+|+.+..++|.+. .+|..++.+..|+.|.|++|.|. ++|..+ .+.|..|||..|
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCC
Confidence 44444444444443 44444444444555555555444 344332 244445555444
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-23 Score=226.61 Aligned_cols=174 Identities=20% Similarity=0.346 Sum_probs=132.1
Q ss_pred CccCHHHHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCccc---HHHHHHHHHHHhhCCCCCcceEEeE
Q 002581 631 NTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG---KNQFVNEIATISAVQHRNLVRLYGC 707 (905)
Q Consensus 631 ~~~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~~~H~niv~l~g~ 707 (905)
+.++.+++. +.....||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+++|++++|||||+++|+
T Consensus 13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 345566662 33346899999999999998 58999999997543322 4678899999999999999999999
Q ss_pred EEe----CCeeEEEEc----------------------------------------------------------------
Q 002581 708 CIE----GARRLLVYD---------------------------------------------------------------- 719 (905)
Q Consensus 708 ~~~----~~~~~lv~e---------------------------------------------------------------- 719 (905)
|.+ ....++|+|
T Consensus 87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 87 IIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred EEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence 977 346788888
Q ss_pred ------------------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 ------------------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 ------------------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|+|||++.+ ..++.|+|||||||++|||+||+.||......+ +.. .....+.
T Consensus 167 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~---~i~~~~~- 239 (283)
T PHA02988 167 HGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYD---LIINKNN- 239 (283)
T ss_pred cchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHH---HHHhcCC-
Confidence 4999999976 789999999999999999999999997543221 111 1111111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+.++ ..+...+.+++.+||+.||++||||.||++.|+
T Consensus 240 ----~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 240 ----SLKLP---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred ----CCCCC---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 11121 122345777888999999999999999999997
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-24 Score=231.36 Aligned_cols=176 Identities=23% Similarity=0.360 Sum_probs=141.9
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
......++||+|-||+|..+....+..||||+++... ...+++|.+|+++|++++|||||+|+|+|..++..++|+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3445578999999999999999888999999998643 4456899999999999999999999999999999998887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg 697 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG 697 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeec
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh--CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS--GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
+|||||.+.-+++|+++|||+|||++||+++ ..+|+.....+ ..++-+..+.+.+....+ ...+
T Consensus 698 r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~~~~-----l~~P 769 (807)
T KOG1094|consen 698 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGRQVV-----LSRP 769 (807)
T ss_pred ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCccee-----ccCC
Confidence 6999999999999999999999999999875 67788754432 233433333332221111 2234
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
..|...+++++++||..+-.+||+++++...|+..
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 45667788999999999999999999999988743
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-23 Score=229.49 Aligned_cols=172 Identities=24% Similarity=0.433 Sum_probs=135.4
Q ss_pred HhcCCCCCCccccccceeEEEEEeCC---C--cEEEEEEccc-cCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLSD---G--RVIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~~---g--~~vAvK~l~~-~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
+++.....++||+|-||.||+|++.+ | ..||||.-+. ......+.|++|+.+|++++|||||+|+|+|.+. ..
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence 34445667899999999999999633 3 3589999865 3344567899999999999999999999999764 46
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|||
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 78887
Q ss_pred -----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|||||.+.-.++|+++|||-|||.+||+++ |.+||..-...+.+ ..+++| .-
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-------~~iEnG--------eR 610 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-------GHIENG--------ER 610 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------EEecCC--------CC
Confidence 5999999999999999999999999999987 99998754332211 001111 11
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
...++.|+..+..++.+||+.+|.+||.+.|+...|....+
T Consensus 611 lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 23456677889999999999999999999999999885444
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=214.95 Aligned_cols=173 Identities=21% Similarity=0.336 Sum_probs=134.1
Q ss_pred ccCHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEE
Q 002581 632 TFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCI 709 (905)
Q Consensus 632 ~~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~ 709 (905)
.+++.|++. .++||+|..|+|||+.. ++++.+|.|++.... ...+++..+|++++++.+||+||+++|.|.
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 356666654 57899999999999995 468999999995433 334678999999999999999999999999
Q ss_pred eCC-eeEEEEc---------------------------------------------------------------------
Q 002581 710 EGA-RRLLVYD--------------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~~-~~~lv~e--------------------------------------------------------------------- 719 (905)
... +..++||
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~ 227 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSG 227 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccH
Confidence 988 5999998
Q ss_pred --------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 --------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 --------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|||||.+.+..|+.++||||||++++|+.+||.|+....+. .. .|+..+ ..+++.
T Consensus 228 ~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~---~~~~Ll------~~Iv~~ 297 (364)
T KOG0581|consen 228 ILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YL---DIFELL------CAIVDE 297 (364)
T ss_pred HhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CC---CHHHHH------HHHhcC
Confidence 599999999999999999999999999999999998764111 11 122111 113332
Q ss_pred CCCCCCH-HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFND-KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~-~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+..+. ....++..++-.|+++||.+||+.+|+++
T Consensus 298 ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 298 PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2222222 24445777788999999999999999886
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-24 Score=227.28 Aligned_cols=161 Identities=32% Similarity=0.587 Sum_probs=122.0
Q ss_pred CCccccccceeEEEEEeC-----CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 648 SNKLGEGGYGPVYKGTLS-----DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+.||.|.||.||+|.+. .+..||||.++... ....++|.+|++.+++++|||||+++|+|...+..++|+|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999976 25789999996533 2346789999999999999999999999998888999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~ 163 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDS 163 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEEST
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||++....++.|+||||||+++|||+| |+.|+..... + .+ .... .++... .. +.
T Consensus 164 ~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~--~~---~~~~-~~~~~~-----~~---~~ 228 (259)
T PF07714_consen 164 SQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-E--EI---IEKL-KQGQRL-----PI---PD 228 (259)
T ss_dssp TSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-H--HH---HHHH-HTTEET-----TS---BT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc-c--cc---cccc-cccccc-----ee---cc
Confidence 5999999999999999999999999999999 6788764421 1 11 2122 222111 11 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
.+...+.+++..||+.+|++||||.++++.|
T Consensus 229 ~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2233477888999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-23 Score=231.42 Aligned_cols=159 Identities=26% Similarity=0.423 Sum_probs=127.0
Q ss_pred CCccccccceeEEEEEeC--CCc--EEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 648 SNKLGEGGYGPVYKGTLS--DGR--VIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~--~g~--~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
.++||+|.||.|++|.|. +|+ .||||+++..... ...+|++|+.+|.+++|+|+|+|+|+..+ ...+||+|
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 468999999999999975 354 5899999765433 57889999999999999999999999886 56667776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p 273 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP 273 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecC
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccC-CCCCCCC
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD-PTLTEFN 791 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d-~~l~~~~ 791 (905)
.|.|||.+..++++.++|||+|||++|||+| |..|+-+..... +. +.+| ...-..+
T Consensus 274 ~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---IL-------------~~iD~~erLpRP 337 (1039)
T KOG0199|consen 274 QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---IL-------------KNIDAGERLPRP 337 (1039)
T ss_pred CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---HH-------------HhccccccCCCC
Confidence 5999999999999999999999999999999 566766443221 11 1122 1112335
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
+.|.+.++.++..||+.+|.+|||+..+++.+
T Consensus 338 k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 338 KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 56778899999999999999999999998533
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-23 Score=218.62 Aligned_cols=121 Identities=28% Similarity=0.518 Sum_probs=108.1
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
..+|...+.||+|+||+||||+. .++..||||.+... ....++....|+++|+.++|||||+|+.|+..++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 45677788899999999999995 46899999999765 3445667899999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 9
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccc
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTE 762 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~ 762 (905)
-|||||+++..+|+.|+|.||.|+||||++||+.||+.....+
T Consensus 169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e 221 (429)
T KOG0595|consen 169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE 221 (429)
T ss_pred hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence 4999999999999999999999999999999999998665433
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-23 Score=220.81 Aligned_cols=168 Identities=25% Similarity=0.383 Sum_probs=132.6
Q ss_pred cCCCCCCccccccceeEEEEEeC----CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS----DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...++||+|+||.||+|.+. .+..||+|+++... ....+.|.+|+.++.+++|||||+++|++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45777899999999999999853 35789999997542 23346799999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
||
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 164 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT 164 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc
Confidence 98
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||++.++.++.++|||||||++||+++ |+.|+......+ +.+.+ .++. ... .
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~----~~~~-----~~~---~ 229 (266)
T cd05064 165 TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAV----EDGF-----RLP---A 229 (266)
T ss_pred ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH----HCCC-----CCC---C
Confidence 3999999999999999999999999999875 999987543221 22211 1111 011 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
+..+...+.+++..||+.+|++||+|.|+.+.|++
T Consensus 230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 12234457778899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-23 Score=236.31 Aligned_cols=171 Identities=26% Similarity=0.397 Sum_probs=131.5
Q ss_pred CCCCccccccceeEEEEEe-CCC----cEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-------
Q 002581 646 DPSNKLGEGGYGPVYKGTL-SDG----RVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------- 712 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~-~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------- 712 (905)
...++||+|+||+||||.+ +.| .+||||++... .....++|+.|+-+|++++||||+||+|+|....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 4568999999999999984 555 46899998644 3445688999999999999999999999997643
Q ss_pred ------------------------------------------------eeEEEEc-------------------------
Q 002581 713 ------------------------------------------------RRLLVYD------------------------- 719 (905)
Q Consensus 713 ------------------------------------------------~~~lv~e------------------------- 719 (905)
+..||-+
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~ 858 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP 858 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc
Confidence 1122221
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|||=|.+...+||.++|||||||.+||++| |.+|++....++ +...++.+.. + ..++
T Consensus 859 ~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-------I~dlle~geR-------L-sqPp 923 (1177)
T KOG1025|consen 859 GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-------IPDLLEKGER-------L-SQPP 923 (1177)
T ss_pred ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-------hhHHHhcccc-------C-CCCC
Confidence 4888899999999999999999999999999 889988665433 2222222211 1 2344
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccCCc
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGT 831 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~~~ 831 (905)
.|...+..++++||..|+..||++++....+.+.+..++
T Consensus 924 iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 924 ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 566778999999999999999999999998876555443
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-22 Score=215.88 Aligned_cols=165 Identities=24% Similarity=0.433 Sum_probs=131.1
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|...+.||+|+||.||+|.+.++..+|+|.+... ....++|.+|++++++++||||++++++|...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 346677889999999999999888889999998633 3345679999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK 162 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|+|||++.+..++.++|||||||++|||+| |+.|+...... ....++. .+. ....+.. ..
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i~----~~~--~~~~~~~------~~ 227 (256)
T cd05114 163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMIS----RGF--RLYRPKL------AS 227 (256)
T ss_pred CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CCC--CCCCCCC------CC
Confidence 4999999998899999999999999999999 88888643321 2222221 111 1111111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
..+.+++.+||+.+|.+||+|.|+++.|
T Consensus 228 ~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 228 MTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 3578899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-22 Score=220.73 Aligned_cols=163 Identities=22% Similarity=0.404 Sum_probs=130.8
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
..|...+.||+|||+.||+++. ..|+.||+|++... ....++...+||++.++++|||||++++|+.+.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4577889999999999999995 88999999999753 3344667899999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T 177 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT 177 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence 8
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
-|+|||++.....+..+||||.|||+|-|++|++||+...-.+ .+..+... +-.++.. .
T Consensus 178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-------ty~~Ik~~------~Y~~P~~---l 241 (592)
T KOG0575|consen 178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-------TYNKIKLN------EYSMPSH---L 241 (592)
T ss_pred ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-------HHHHHHhc------Ccccccc---c
Confidence 4999999999999999999999999999999999998542211 22222111 1111211 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+..+++...++.+|.+|||+.+|+.
T Consensus 242 s~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 242 SAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 223455666889999999999999996
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=211.82 Aligned_cols=172 Identities=22% Similarity=0.331 Sum_probs=133.8
Q ss_pred HHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeE
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 637 ~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
|++.+++++.....||+|+||.||+|.. .+++.||||.+........+.|.+|++++++++|+|||+++|+|..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 4566788898899999999999999995 467889999987655556678999999999999999999999999999999
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 9987
Q ss_pred ------------CCCChhhhccCC--CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 ------------GYLAPEYAMRGH--LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 ------------gY~APE~~~~~~--~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|+|||++.+.. ++.++|||||||++|||+||+.|+....... ...|...... ..+
T Consensus 162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~~-------~~~ 231 (268)
T cd06624 162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMFK-------IHP 231 (268)
T ss_pred CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhhc-------cCC
Confidence 589999987654 8899999999999999999999986432111 1111111000 112
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+. ......+..++.+||+.+|.+||||.||+.
T Consensus 232 ~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 EIP---ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCC---cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 221 122234667888999999999999999886
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-22 Score=222.86 Aligned_cols=173 Identities=23% Similarity=0.409 Sum_probs=127.5
Q ss_pred HhcCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~ 712 (905)
+.++|...++||+|+||.||+|.. .+++.||||++.... ....+.|.+|++++.++ +|||||+++|+|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456788889999999999999973 235689999997432 23346799999999999 8999999999886533
Q ss_pred -eeEEEE-------------------------------------------------------------------------
Q 002581 713 -RRLLVY------------------------------------------------------------------------- 718 (905)
Q Consensus 713 -~~~lv~------------------------------------------------------------------------- 718 (905)
..++|+
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 223322
Q ss_pred -----------------c----------------------------------------------------------CCCC
Q 002581 719 -----------------D----------------------------------------------------------GYLA 723 (905)
Q Consensus 719 -----------------e----------------------------------------------------------gY~A 723 (905)
+ .|||
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 0 3999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVA 802 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~ 802 (905)
||++.+..++.|+|||||||++|||+| |+.|+......+. + ......+.. +.. +......+.+++
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~----~~~~~~~~~-----~~~---~~~~~~~l~~li 310 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--F----CQRLKDGTR-----MRA---PENATPEIYRIM 310 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--H----HHHHhcCCC-----CCC---CCCCCHHHHHHH
Confidence 999999999999999999999999997 9999875332111 1 111111111 111 112233477889
Q ss_pred HHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 803 LLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 803 ~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
.+||+.||.+||||.||+++|+..+
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998544
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=211.32 Aligned_cols=169 Identities=24% Similarity=0.361 Sum_probs=132.6
Q ss_pred cCCCCCCccccccceeEEEEEeCC----CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...+.||+|+||+||+|++.. ...||||+++... .....+|.+|+.++++++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999999642 4579999986543 33456799999999999999999999999998889999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 98
Q ss_pred ---------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ---------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||+..+..++.++||||||++++||+| |+.|+...... .+.+++ ..+. ..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~----~~~~--- 229 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAV----EDGY----RLPP--- 229 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcCC----CCCC---
Confidence 3999999999999999999999999999998 99888643321 122221 1110 0011
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
+..+...+.+++..||+.+|++||+|.||+++|+..
T Consensus 230 -~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 230 -PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112234477889999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.4e-22 Score=213.83 Aligned_cols=168 Identities=28% Similarity=0.495 Sum_probs=130.9
Q ss_pred cCCCCCCccccccceeEEEEEeCC------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
++|...+.||+|+||.||+|.... ...||+|.+.... .....+|.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 356778899999999999998532 2579999996433 233567999999999999999999999998877777
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+++|
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence 7765
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.|||||++..+.++.++|||||||++|||+| |+.|+......+ +..++
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~i-- 239 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEMI-- 239 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH--
Confidence 3999999999999999999999999999998 999987543322 22221
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
..+. ....+..+..++.+++.+||+.+|.+||+++||++.|+.
T Consensus 240 --~~~~--------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 --RSRQ--------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HcCC--------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111 111122334567888999999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.6e-22 Score=211.54 Aligned_cols=169 Identities=24% Similarity=0.416 Sum_probs=134.3
Q ss_pred HhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.+++|...+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++|+||+++++++...+..++|+|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 345688889999999999999998778899999986433 345779999999999999999999999999888899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE 162 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
+|+|||+..+..++.++|||||||+++||+| |+.|+....... +.. ...... ... .+.
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~-----~~~---~~~ 227 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQ----QVDQGY-----RMP---CPP 227 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----HHHcCC-----CCC---CCC
Confidence 3999999999999999999999999999999 888886432211 111 111110 000 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.....+.+++.+|++.+|.+||+|.++++.|+.
T Consensus 228 ~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 228 GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 223457788899999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=212.92 Aligned_cols=174 Identities=23% Similarity=0.342 Sum_probs=128.8
Q ss_pred cCCCCCCccccccceeEEEEEeCC-----------------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD-----------------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRL 704 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l 704 (905)
++|...++||+|+||.||+|...+ +..||||.+.... .....+|.+|++++.+++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 457778899999999999997532 3479999987542 2345679999999999999999999
Q ss_pred EeEEEeCCeeEEEEc-----------------------------------------------------------------
Q 002581 705 YGCCIEGARRLLVYD----------------------------------------------------------------- 719 (905)
Q Consensus 705 ~g~~~~~~~~~lv~e----------------------------------------------------------------- 719 (905)
+|+|...+..++|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl 164 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL 164 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence 999988777777765
Q ss_pred ----------------------------------------CCCChhhhccCCCCccCceEeechhhHHhHhC--CCCCCC
Q 002581 720 ----------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISG--RANSDN 757 (905)
Q Consensus 720 ----------------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg--~~p~~~ 757 (905)
.|||||++..+.++.++|||||||++|||+++ ..|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 39999999999999999999999999999974 456654
Q ss_pred CCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 758 SLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 758 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
... .....++........ ..... ..+..+...+.+++.+||+.+|.+||||.||++.|+
T Consensus 245 ~~~---~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTD---EQVIENAGEFFRDQG-RQVYL----FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCH---HHHHHHHHHHhhhcc-ccccc----cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 322 123333332222111 00100 011123345788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=210.52 Aligned_cols=167 Identities=23% Similarity=0.401 Sum_probs=133.0
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|...++||+|+||.||+|...+++.||||.+.... ...+.|.+|+.++++++|+||+++++++...+..++|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4677789999999999999998888899999986432 345789999999999999999999999999888899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 164 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
+|+|||+...+.++.++|||||||++|||+| |+.|+...... ....++. .+.. .+.....
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~----~~~~----~~~~~~~---- 229 (261)
T cd05072 165 KFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSALQ----RGYR----MPRMENC---- 229 (261)
T ss_pred ccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHHHH----cCCC----CCCCCCC----
Confidence 3999999999999999999999999999999 88888643221 1222221 1100 0111122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
...+.+++.+|++.+|++||+|.++.+.|+.
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 230 PDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2346778899999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-22 Score=212.23 Aligned_cols=170 Identities=24% Similarity=0.401 Sum_probs=133.1
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CC---cEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DG---RVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
+++|+..+.||+|+||.||+|+.. ++ ..||||++.... ....++|.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356788899999999999999964 33 379999996542 3345679999999999999999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 998
Q ss_pred -----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||++..+.++.++|||||||++|||+| |+.|+......+ + .... ..+. ..+..
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~---~~~i-~~~~----~~~~~ 232 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---V---MKAI-NDGF----RLPAP 232 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---H---HHHH-hcCC----CCCCC
Confidence 2999999999999999999999999999998 999986543211 1 1111 1110 00111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
.+....+.+++.+||+.+|++||+|.+|++.|++.
T Consensus 233 ----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 233 ----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 12234578899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-22 Score=211.29 Aligned_cols=174 Identities=24% Similarity=0.330 Sum_probs=137.1
Q ss_pred HHHHHHhcCCCCCCccccccceeEEEEEeCC------CcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEE
Q 002581 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSD------GRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCC 708 (905)
Q Consensus 636 ~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~ 708 (905)
+|+.....+|....++-+|.||.||+|.|.+ .+.|-||.++.. +.-....|+.|.-.+..+.|||+..+.|+|
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4555566778888899999999999997643 456788888643 333456799999999999999999999999
Q ss_pred EeCC-eeEEEEc--------------------------------------------------------------------
Q 002581 709 IEGA-RRLLVYD-------------------------------------------------------------------- 719 (905)
Q Consensus 709 ~~~~-~~~lv~e-------------------------------------------------------------------- 719 (905)
++.. ..++.|.
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence 8754 4455554
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.||+||.+....|+.++|||||||+||||+| |+.|+.+..+.|. ..
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm-------~~ 509 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM-------EH 509 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH-------HH
Confidence 6999999999999999999999999999999 8899876655442 22
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
++.+|.. + ..+-+|+.+++.++..||+..|++||+++|++.-|.
T Consensus 510 ylkdGyR-------l-aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 510 YLKDGYR-------L-AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHhccce-------e-cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 3333211 1 123456777999999999999999999999999886
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-22 Score=213.13 Aligned_cols=171 Identities=23% Similarity=0.417 Sum_probs=137.1
Q ss_pred HHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++..+|...+.||+|+||.||+|...++..||+|++.........++.+|++++++++|+||+++++++......++|+|
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567888899999999999999988899999999976555456789999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~ 162 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS 162 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||+...+.++.++|||||||+++||+| |+.|+...... ....++. .+ ..+.. +.
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~----~~-----~~~~~---~~ 227 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQIT----AG-----YRMPC---PA 227 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH----hC-----CcCCC---CC
Confidence 3899999999999999999999999999999 78888644321 1222211 11 01111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.+...+.+++.+|++.+|.+||||+++++.|+.
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 223457788899999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-21 Score=213.09 Aligned_cols=167 Identities=27% Similarity=0.486 Sum_probs=130.6
Q ss_pred cCCCCCCccccccceeEEEEEeCC------CcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD------GRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
++|...+.||+|+||.||+|...+ ++.||||++...... ..++|.+|++++.+++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 456778899999999999998632 478999999754333 4578999999999999999999999999888777
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence 7764
Q ss_pred ------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 ------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 ------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|+|||++.++.++.++|||||||++|||+| |+.|+......+ ..+++.
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~~~--- 238 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIECIT--- 238 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH---
Confidence 3999999999999999999999999999999 999986543221 222221
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+... ..+......+.+++..||+.+|++||++.||+++|+
T Consensus 239 -~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 -QGRLL--------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -cCCcC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111 111112334778889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-21 Score=206.69 Aligned_cols=161 Identities=28% Similarity=0.408 Sum_probs=127.8
Q ss_pred CccccccceeEEEEEeCCCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--------
Q 002581 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-------- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-------- 719 (905)
++||+|+||.||+|...+++.||+|.+..... .....|.+|++++++++|+||++++++|......++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46999999999999988899999999865432 234579999999999999999999999999999999998
Q ss_pred ------------------------------------------------------------------------------CC
Q 002581 720 ------------------------------------------------------------------------------GY 721 (905)
Q Consensus 720 ------------------------------------------------------------------------------gY 721 (905)
.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y 160 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKW 160 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccc
Confidence 39
Q ss_pred CChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 002581 722 LAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIG 800 (905)
Q Consensus 722 ~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 800 (905)
+|||+..++.++.++|||||||++||++| |+.|+....... .. .....+. .... +......+.+
T Consensus 161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~----~~~~~~~-----~~~~---~~~~~~~~~~ 225 (250)
T cd05085 161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AR----EQVEKGY-----RMSC---PQKCPDDVYK 225 (250)
T ss_pred cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HH----HHHHcCC-----CCCC---CCCCCHHHHH
Confidence 99999999999999999999999999999 888986442211 11 1111111 1111 1122345778
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHh
Q 002581 801 VALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 801 l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
++.+|++.+|++||+|.|++++|.
T Consensus 226 li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 226 VMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHcccCcccCCCHHHHHHHhc
Confidence 899999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=209.70 Aligned_cols=165 Identities=22% Similarity=0.409 Sum_probs=129.4
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+|...+.||+|+||+||+|...++..||||.+... ....++|.+|+.++.+++||||++++|+|...+..++|+|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 45567889999999999999877778999998643 2345679999999999999999999999998888899988
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~ 163 (256)
T cd05113 84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKF 163 (256)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCcc
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||+..++.++.++|||||||++|||+| |+.|+......+ +...+ ..+.. +.... ....
T Consensus 164 ~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~----~~~~~-----~~~~~---~~~~ 228 (256)
T cd05113 164 PVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKV----SQGLR-----LYRPH---LASE 228 (256)
T ss_pred ChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH----hcCCC-----CCCCC---CCCH
Confidence 3999999999999999999999999999999 999886433211 11111 11110 00111 1124
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+.+++.+||+.+|.+||++.++++.|+
T Consensus 229 ~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 229 KVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 5778889999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=222.41 Aligned_cols=171 Identities=22% Similarity=0.396 Sum_probs=127.5
Q ss_pred HhcCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~ 712 (905)
..++|...+.||+|+||.||+|+. .++..||||+++... ....+.|.+|++++..+ +|||||+++|+|..++
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345678889999999999999973 235689999996432 33456799999999999 8999999999987766
Q ss_pred eeEEEE--------------------------------------------------------------------------
Q 002581 713 RRLLVY-------------------------------------------------------------------------- 718 (905)
Q Consensus 713 ~~~lv~-------------------------------------------------------------------------- 718 (905)
..++|+
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 554443
Q ss_pred -----------------------------c--------------------------------------------------
Q 002581 719 -----------------------------D-------------------------------------------------- 719 (905)
Q Consensus 719 -----------------------------e-------------------------------------------------- 719 (905)
+
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 0
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|||||+..+..++.++|||||||++|||+| |+.|+....... .+..++. .+.. +.....
T Consensus 273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~----~~~~-----~~~~~~ 341 (375)
T cd05104 273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIK----EGYR-----MLSPEC 341 (375)
T ss_pred cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHH----hCcc-----CCCCCC
Confidence 3999999999999999999999999999998 788876432211 2222221 1110 011111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
...++.+++..||+.||++||+|.||+++|+.
T Consensus 342 ---~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 ---APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 12346788899999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-24 Score=222.59 Aligned_cols=263 Identities=28% Similarity=0.384 Sum_probs=221.7
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
.+..|.+++|.+.. +.+.+.+|..|++|++.+|+++ ..|++++.+..++.|+.++|.++ .+|++++.+.+|+.|+.+
T Consensus 46 ~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 35667777777764 4456788999999999999987 78888999999999999999998 789999999999999999
Q ss_pred cccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCC
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~ 212 (905)
+|.+. ++|++++.+..|+.|+..+|+++ .+|++++++.+|..|++.+|++....|+.+. ++.|+.||...|.+. .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 99988 78889999999999999998887 5788899999999999999999866555554 999999999998775 78
Q ss_pred CccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccC-CCCCCCEEeccCCcCCccCCccccCC
Q 002581 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIG-ELQNLQTLDLSFNNLTGQIPRTLFNI 291 (905)
Q Consensus 213 p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~-~l~~L~~L~Ls~N~l~g~ip~~l~~l 291 (905)
|..++.+.+|..|++..|++... +.|.++..|++|+++.|++. .+|...+ ++.+|..|||..|++. ..|+.+.-+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~~l--Pef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIRFL--PEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccccC--CCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 99999999999999998887543 47888889999999999987 5666655 8899999999999998 789999999
Q ss_pred CCCCEEECcCCcCccCCCCCCC-CCCCEEEeecCCCC
Q 002581 292 DSLNYLFLGNNSLSGTLPTQKS-ENLQNIDLSYNHLS 327 (905)
Q Consensus 292 ~~L~~L~Ls~N~l~g~~p~~~~-~~L~~L~Ls~N~ls 327 (905)
.+|.+||+++|.+++ +|...+ -.|+.|-+.+|.+.
T Consensus 275 rsL~rLDlSNN~is~-Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 275 RSLERLDLSNNDISS-LPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred hhhhhhcccCCcccc-CCcccccceeeehhhcCCchH
Confidence 999999999999996 444333 27888888888874
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=209.43 Aligned_cols=167 Identities=26% Similarity=0.400 Sum_probs=131.4
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+|...+.||+|+||.||+|... +++.||+|++... ....++|.+|++++.+++|+||++++++|...+..++|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 34677889999999999999964 5889999998643 3345679999999999999999999999999888889987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
+|+|||+..+..++.++|||||||+++||+| |+.|+...... ++. .....+ ..+... ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~------~~~-~~~~~~-----~~~~~~---~~ 229 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVY-ELLEKG-----YRMERP---EG 229 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHH-HHHHCC-----CCCCCC---CC
Confidence 3999999999999999999999999999999 88887643221 111 111111 111111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
....+.+++.+||+.+|++||+|.|++++|+.
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 23447778889999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-21 Score=205.00 Aligned_cols=171 Identities=21% Similarity=0.363 Sum_probs=133.2
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||+|+. .+++.||||++... .....++|.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688889999999999999995 46899999988532 2233457999999999999999999999999888888888
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 7
Q ss_pred ---------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ---------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+..... ...++.... .. ...+.. .
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~-~~-----~~~~~~--~ 229 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKI-EQ-----CDYPPL--P 229 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHH-hc-----CCCCCC--C
Confidence 59999999998999999999999999999999999864321 112222211 11 111111 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.......+.+++.+||+.+|++||++.+|++.|+.
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 11223457788889999999999999999999974
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-21 Score=212.12 Aligned_cols=170 Identities=28% Similarity=0.497 Sum_probs=133.1
Q ss_pred cCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...+.||+|+||+||++.. .++..+|||.+........+.|.+|++++.+++|+||++++++|...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4677889999999999999984 2346799999976555556789999999999999999999999998888888
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence 886
Q ss_pred ----------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhc
Q 002581 720 ----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHEN 776 (905)
Q Consensus 720 ----------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 776 (905)
.|+|||++.+..++.++|||||||+++||+| |+.|+......+ ..+. ...
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~----i~~ 237 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIEC----ITQ 237 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHc
Confidence 3999999999999999999999999999999 888876443211 1111 111
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+... .... .....+.+++.+||+.+|.+||||.||++.|+...
T Consensus 238 ~~~~-----~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 238 GRVL-----QRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred CCcC-----CCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1111 1111 12234788999999999999999999999998544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=212.46 Aligned_cols=169 Identities=24% Similarity=0.450 Sum_probs=131.2
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
++++|...+.||+|+||.||+|... .++.||||++.... .....+|.+|+.++++++|+|||+++++|.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 5678899999999999999999743 25679999986432 2345679999999999999999999999998888
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence 888876
Q ss_pred ----------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhc
Q 002581 720 ----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHEN 776 (905)
Q Consensus 720 ----------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 776 (905)
.|||||++.++.++.++|||||||+++||+| |+.|+......+ ..+++ ..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~~----~~ 236 (277)
T cd05062 164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRFV----ME 236 (277)
T ss_pred CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH----Hc
Confidence 3999999999999999999999999999999 677876433211 11111 11
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+.. ...+..+...+.+++.+|++.+|++|||+.|++++|+
T Consensus 237 ~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 GGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCc--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111 1111122345778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-21 Score=208.09 Aligned_cols=178 Identities=20% Similarity=0.305 Sum_probs=131.3
Q ss_pred hcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhh--CCCCCcceEEeEEEeCC----eeE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA--VQHRNLVRLYGCCIEGA----RRL 715 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--~~H~niv~l~g~~~~~~----~~~ 715 (905)
.......+.||+|.||+||+|.+. |+.||||++.. .+.+.|.+|.++... +||+||..+++.-..+. +.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 355666789999999999999996 78999999963 345679999998876 49999999999866443 667
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
||.+
T Consensus 286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 8876
Q ss_pred -------------------CCCChhhhccCC------CCccCceEeechhhHHhHhC----------CCCCCCCCccchh
Q 002581 720 -------------------GYLAPEYAMRGH------LTEKADVFSFGVVALEVISG----------RANSDNSLDTEKI 764 (905)
Q Consensus 720 -------------------gY~APE~~~~~~------~t~k~DVySfGvvLlElltg----------~~p~~~~~~~~~~ 764 (905)
+|||||++.... --..+||||||.|+||+.-+ +.||++..+.+..
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 699999987532 12468999999999999753 3455544333211
Q ss_pred hHHHHHHHHhhcCccccccCCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccC
Q 002581 765 YLLEWAWNLHENNQSLGLVDPTLT--EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 765 ~l~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~ 829 (905)
. +-+++-...+-+.|.++ ....+++..+.+++..||..+|..|-|+-.|-+.|.+..+.
T Consensus 446 ~------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 446 F------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred H------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 0 01111112234456663 33457888999999999999999999999999999865543
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-21 Score=211.01 Aligned_cols=169 Identities=24% Similarity=0.439 Sum_probs=131.5
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
..++|...+.||+|+||.||+|... ++..||||++.... ....++|.+|++++++++|||||+++++|..++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567888899999999999999853 46789999986432 2335679999999999999999999999988877
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 777775
Q ss_pred ----------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchh
Q 002581 720 ----------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKI 764 (905)
Q Consensus 720 ----------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~ 764 (905)
.|+|||+..+..++.|+|||||||++|||+| |..|+......+
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~-- 240 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE-- 240 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 3999999999999999999999999999998 878876432211
Q ss_pred hHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 765 YLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 765 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+... ...+... ..+.....++.+++.+|++.+|++||||.||++.|+
T Consensus 241 ----~~~~-~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 241 ----VIYY-VRDGNVL--------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred ----HHHH-HhcCCCC--------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1111 1111111 111122345788999999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-21 Score=212.19 Aligned_cols=170 Identities=26% Similarity=0.458 Sum_probs=132.9
Q ss_pred cCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
.+|...+.||+|+||.||+|+.. ++..||+|.+........+.|.+|++++++++|+||++++++|...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 34667789999999999999742 356799999976555556789999999999999999999999998888888
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence 876
Q ss_pred -------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHH
Q 002581 720 -------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNL 773 (905)
Q Consensus 720 -------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~ 773 (905)
.|+|||++.+..++.++|||||||++|||+| |+.|+......+ ..+.
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~---- 237 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIEC---- 237 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----
Confidence 3999999999999999999999999999999 999986543221 1111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 774 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
...+.... ....+...+.+++.+||+.+|.+||+|.+|+++|+...
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 238 ITQGRVLE--------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HhCCCCCC--------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11111111 11122345778899999999999999999999998543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-21 Score=208.93 Aligned_cols=180 Identities=21% Similarity=0.309 Sum_probs=128.5
Q ss_pred CCCCccccccceeEEEEEe-----CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEE
Q 002581 646 DPSNKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLV 717 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv 717 (905)
...+.||+|+||+||++.. .+++.||||.+.... ....+.|.+|++++++++||||++++++|... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6678999999999988653 357899999997543 23456799999999999999999999998764 356788
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 166 (283)
T cd05080 87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 166 (283)
T ss_pred ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhcc
Confidence 87
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC-CCC
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL-TEF 790 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~ 790 (905)
.|+|||+.....++.|+|||||||+++||+||+.|+...... ...+..+...........+.++... ...
T Consensus 167 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd05080 167 REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLIELLERGMRLPC 245 (283)
T ss_pred CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccchhhhhhhhhcCCCCCC
Confidence 289999999999999999999999999999999997643211 0111111100000001111111111 111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
+......+.+++..||+.+|++||||++|+++|+..
T Consensus 246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 222345678899999999999999999999999843
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-21 Score=198.51 Aligned_cols=178 Identities=23% Similarity=0.366 Sum_probs=132.2
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.|....++|+|+||+|||++- .+|+.||||++....+ .-.+-.+||+++|++++|+|+|.|+.+|......+||+|
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 355567899999999999995 4699999999964432 224558999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYV 162 (396)
T KOG0593|consen 83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYV 162 (396)
T ss_pred cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhh
Confidence
Q ss_pred ---CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH--------HhhcC-ccccccCCC
Q 002581 720 ---GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN--------LHENN-QSLGLVDPT 786 (905)
Q Consensus 720 ---gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~--------~~~~~-~~~~~~d~~ 786 (905)
.|.|||.+.+ .+|...+||||.|||+.||+||.+-+.+..+-++.+++.-... .+... ....+.=|.
T Consensus 163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~ 242 (396)
T KOG0593|consen 163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPE 242 (396)
T ss_pred hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCC
Confidence 6999999988 6899999999999999999999988876655454444322111 11111 111111111
Q ss_pred CC--C----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LT--E----FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~--~----~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. + -.+....-+++++..|++.||++|++.+|.+.
T Consensus 243 ~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 243 PEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11 0 01112234678899999999999999999874
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=213.42 Aligned_cols=117 Identities=23% Similarity=0.407 Sum_probs=104.0
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
-++|...+.||+|+||.||+++.. +|..||+|.+.... ....++|.+|++++++++|+|||++++++..++..++|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357888899999999999999954 68899999987542 2335679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
.|+|||++.+..++.++|||||||++|||+||+.|+...
T Consensus 164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 599999999999999999999999999999999998643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-21 Score=204.12 Aligned_cols=168 Identities=20% Similarity=0.264 Sum_probs=127.1
Q ss_pred cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--c----c-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--H----Q-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~----~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
+.|-..+.+|+|+||.|-+|. ..+|+.||||+++... . . ......+|+++|.+++|||||++++++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 345568899999999999998 6689999999996431 1 1 122347999999999999999999999999999
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
|||+|
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~ 331 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE 331 (475)
T ss_pred EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc
Confidence 99999
Q ss_pred -----------CCCChhhhccCC---CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 -----------GYLAPEYAMRGH---LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 -----------gY~APE~~~~~~---~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|.|||++.+.. +..|+|+||+||||+-++||-+||.+..... .+.+- ...|+.. +-
T Consensus 332 ~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~eQ----I~~G~y~--f~- 402 (475)
T KOG0615|consen 332 GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKEQ----ILKGRYA--FG- 402 (475)
T ss_pred ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHHH----HhcCccc--cc-
Confidence 699999998764 3347899999999999999999998654322 12111 1111110 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+....+...+...++-+++..||++|||+.|+++
T Consensus 403 --p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 403 --PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred --ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1122334455777888999999999999999986
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-21 Score=204.93 Aligned_cols=163 Identities=23% Similarity=0.406 Sum_probs=129.3
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|+.. +++.||+|.+... .....++|.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4667789999999999999964 6899999998643 23456779999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..++.++.++|||||||+++||+||+.|+...... ....++ ..+.. +.+ ....
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~----~~~~~-----~~~---~~~~ 225 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKI----IRGVF-----PPV---SQMY 225 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HcCCC-----CCC---cccc
Confidence 499999999999999999999999999999999998754311 111111 11111 111 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+||+.+|++||+|.++++
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 345778889999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-21 Score=209.71 Aligned_cols=169 Identities=27% Similarity=0.430 Sum_probs=131.1
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
++++|...+.||+|+||.||+|... .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4567888999999999999999964 35789999986433 3334679999999999999999999999988877
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 888876
Q ss_pred ----------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhc
Q 002581 720 ----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHEN 776 (905)
Q Consensus 720 ----------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 776 (905)
.|||||++.++.++.++|||||||++|||+| |+.||+.....+ +.+ ....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~----~~~~ 236 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VME----FVTG 236 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHHc
Confidence 2899999999999999999999999999997 888887543221 111 1111
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
... +. .+......+.+++.+|++.+|++||++.+|++.|+
T Consensus 237 ~~~-----~~---~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGR-----LD---PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCc-----CC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 100 01 11112345778889999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-21 Score=205.88 Aligned_cols=166 Identities=23% Similarity=0.416 Sum_probs=125.6
Q ss_pred CCCCCccccccceeEEEEEeCC----CcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe-----
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR----- 713 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~----g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~----- 713 (905)
|...+.||+|+||.||+|+... +..||||++.... ....++|.+|++.+++++|+||++++|++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999999642 3679999986432 2334679999999999999999999999876543
Q ss_pred -eEEEEc-------------------------------------------------------------------------
Q 002581 714 -RLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 714 -~~lv~e------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 456654
Q ss_pred -------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 -------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 -------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|+|||++.+..++.++|||||||+++||++ |..|+..... ..+.+++. .+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~----~~~~ 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLR----HGNR 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH----cCCC
Confidence 4899999998999999999999999999999 8888764322 11222221 1111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
+. .+......+.+++.+|++.||.+|||+.||++.|+.
T Consensus 234 -----~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 234 -----LK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred -----CC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11 112233457888899999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-23 Score=219.88 Aligned_cols=242 Identities=26% Similarity=0.406 Sum_probs=221.4
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
.++.|.+.+|.++ .+|++++.+..++.|+.++|+++ .+|..++.+.+|+.|+.++|.+. .+|++++.+-.|..|+..
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcc
Confidence 5778888998887 57888999999999999999997 79999999999999999999999 688899999999999999
Q ss_pred cccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCC
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~ 212 (905)
+|+++ .+|+.++++.+|..|++.+|++....|..+. ++.|++||...|.+. .+|+.++.+.+|..|+|..|++. .+
T Consensus 146 ~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~l 221 (565)
T KOG0472|consen 146 NNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FL 221 (565)
T ss_pred ccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cC
Confidence 99998 7999999999999999999999866555555 999999999999876 78999999999999999999997 56
Q ss_pred CccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCC
Q 002581 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID 292 (905)
Q Consensus 213 p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~ 292 (905)
| .|..++.|..|+++.|.+..........+.+|..|+|++|+++ ..|+.+..+.+|.+||+|+|.++ .+|.+++++
T Consensus 222 P-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl- 297 (565)
T KOG0472|consen 222 P-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL- 297 (565)
T ss_pred C-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-
Confidence 7 8999999999999999887776667779999999999999998 78999999999999999999999 578899999
Q ss_pred CCCEEECcCCcCc
Q 002581 293 SLNYLFLGNNSLS 305 (905)
Q Consensus 293 ~L~~L~Ls~N~l~ 305 (905)
+|+.|-+.+|.+.
T Consensus 298 hL~~L~leGNPlr 310 (565)
T KOG0472|consen 298 HLKFLALEGNPLR 310 (565)
T ss_pred eeeehhhcCCchH
Confidence 9999999999874
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-21 Score=213.09 Aligned_cols=170 Identities=23% Similarity=0.431 Sum_probs=128.0
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCc----EEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGR----VIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
.+|...+.||+|+||+||+|++. +|+ .||||++.... ....++|.+|+.+++.++|+|||+++|+|.... .++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~-~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC-cee
Confidence 45888899999999999999853 344 48999996443 334567999999999999999999999997654 445
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 165 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE 165 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence 544
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|||||++....++.++|||||||++|||+| |+.|++.....+ +.. ....+.. ...
T Consensus 166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~--~~~---- 232 (316)
T cd05108 166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGER--LPQ---- 232 (316)
T ss_pred eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHhCCCC--CCC----
Confidence 3999999999999999999999999999998 999987532211 111 1111110 000
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
+..+...+.+++..||+.+|.+||+|.+++..|.....
T Consensus 233 --~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 233 --PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred --CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 11123347788899999999999999999999885443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-21 Score=209.54 Aligned_cols=165 Identities=23% Similarity=0.289 Sum_probs=125.2
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||+|+||+||+|.. .+|+.||||++.... ......+.+|++++.+++|+|||++.+++.+.+..++|+|
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 56678999999999999995 578999999986432 2234568899999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
+|||||++.+..++.++|||||||++|||+||+.||......... +-+........ ..+ +....
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~------~~~---~~~~s 229 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR---EEVDRRVKEDQ------EEY---SEKFS 229 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH---HHHHHHhhccc------ccC---CccCC
Confidence 699999999999999999999999999999999999754322111 11111111100 001 11112
Q ss_pred HHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPs-----m~ev~~ 821 (905)
..+.+++..|++.||.+||+ +.++++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 24667888999999999997 666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=210.04 Aligned_cols=179 Identities=17% Similarity=0.286 Sum_probs=130.8
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|+|||++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 35778899999999999999965 68899999986432 2335678999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE 160 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH---------HHhhcCccccccCC
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW---------NLHENNQSLGLVDP 785 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~~d~ 785 (905)
.|+|||++.+..++.++|||||||++|||+||+.||......+....+..+. .............+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07848 161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP 240 (287)
T ss_pred cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence 4999999999999999999999999999999999987543222111111110 00000000000001
Q ss_pred CCCC-------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTE-------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~-------~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... ........+.+++..|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1100 00112235778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-21 Score=210.04 Aligned_cols=165 Identities=27% Similarity=0.395 Sum_probs=124.6
Q ss_pred CCCCCccccccceeEEEEEeC------CCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
|...+.||+|+||+||+|... +++.||||+++..... ..+.|.+|+.++++++|||||+++|++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 445678999999999999853 2478999999754322 346799999999999999999999998776665555
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~ 166 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKIS 166 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEec
Confidence 43
Q ss_pred ------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 ------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 ------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|+|||++.++.++.++|||||||++|||+| |..|+...... ++.....
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~~i~ 240 (283)
T cd05091 167 DLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVIEMIR 240 (283)
T ss_pred ccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHH
Confidence 4999999999999999999999999999999 77777543221 1111111
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+. ....+..+...+.+++..||+.+|++||+|++|++.|+
T Consensus 241 -~~~--------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 241 -NRQ--------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred -cCC--------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 111 11112223344778889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-21 Score=204.85 Aligned_cols=172 Identities=22% Similarity=0.359 Sum_probs=132.3
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||+|.. .+++.||||.+.... ....++|.+|++++++++|+||+++++++..++..++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3577788999999999999994 578999999886432 223467999999999999999999999999988888998
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 7
Q ss_pred ---------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ---------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
+|+|||+..+..++.++|||||||++|||+||+.|+...... ...+... ......+.+.
T Consensus 162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~------~~~~~~~~~~-- 229 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK------IEQCDYPPLP-- 229 (267)
T ss_pred ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhh------hhcCCCCCCC--
Confidence 599999999999999999999999999999999998643211 1111111 1111112111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
.......+.+++.+||+.+|.+||||.+|++++++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 111233466788899999999999999999998743
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=208.36 Aligned_cols=168 Identities=25% Similarity=0.432 Sum_probs=128.4
Q ss_pred cCCCCCCccccccceeEEEEEe-----CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...+.||+|+||+||+|.. .++..||||.+.... .....+|.+|++++++++|+|||+++|++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3566778999999999999984 246789999997433 2334679999999999999999999999988877777
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k 164 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence 775
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.|+|||+..++.++.++|||||||+++||+| |+.|+...... .+.+.
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~~--- 238 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIEM--- 238 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH---
Confidence 2999999998999999999999999999999 88888643221 11111
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
...+... .. +.....++.+++..||+.+|++||++.+|.++|.+
T Consensus 239 -~~~~~~~-----~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 -VRKRQLL-----PC---SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHcCCcC-----CC---CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111111 11 11122346778889999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=205.12 Aligned_cols=171 Identities=20% Similarity=0.331 Sum_probs=129.5
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|...++||+|+||.||+|.. .+++.||||++... .....++|.+|++++.+++||||++++++|...+..++|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 566778999999999999984 57899999998643 23345679999999999999999999999999999999997
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
.|+|
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~a 161 (279)
T cd06619 82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMA 161 (279)
T ss_pred CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcC
Confidence 5999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchh-hHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI-YLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVA 802 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~ 802 (905)
||++.+..++.++|||||||++|||+||+.|+......+.. ....+...... . ..+.+.. ......+.+++
T Consensus 162 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~--~~~~~~~~~li 233 (279)
T cd06619 162 PERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD-E-----DPPVLPV--GQFSEKFVHFI 233 (279)
T ss_pred ceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc-c-----CCCCCCC--CcCCHHHHHHH
Confidence 99999999999999999999999999999998753322211 11111111111 0 0111111 01122467788
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 002581 803 LLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 803 ~~C~~~~P~~RPsm~ev~~~ 822 (905)
.+|++.+|++||++.||++.
T Consensus 234 ~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 234 TQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHhhCChhhCCCHHHHhcC
Confidence 89999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-21 Score=204.16 Aligned_cols=165 Identities=27% Similarity=0.458 Sum_probs=128.7
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|...+.||+|+||.||+|...++..||+|.+.... ...++|.+|+.++++++|+|++++++++.+ ...++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence 4567788999999999999998888899999997433 245679999999999999999999998854 45678876
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..+..++.++|||||||+++||+| |+.|+...... ...++. ..+. .+.. +...
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~-----~~~~---~~~~ 228 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQV----ERGY-----RMPC---PQDC 228 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----HcCC-----CCCC---CCcC
Confidence 3999999999999999999999999999999 88888643221 122211 1110 0111 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
...+.+++.+|++.+|++||||+++.+.|+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 345778889999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-21 Score=204.81 Aligned_cols=166 Identities=28% Similarity=0.512 Sum_probs=131.1
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
.+|+..+.||+|+||.||+|...+++.+|||++... .....+|.+|++++++++|||++++++++......++|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 356667899999999999999877889999998643 2335679999999999999999999999998888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK 162 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
+|+|||+..++.++.++|||||||++|||++ |+.|+...... .+.+ .. .++ ....++.. ..
T Consensus 163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~---~~-~~~--~~~~~~~~------~~ 227 (256)
T cd05112 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---EVVE---TI-NAG--FRLYKPRL------AS 227 (256)
T ss_pred cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHH---HH-hCC--CCCCCCCC------CC
Confidence 4999999999999999999999999999998 89888643321 1111 11 111 11112222 12
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
..+.+++.+||+.+|++||||.||+++|.
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 45788999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.5e-21 Score=204.05 Aligned_cols=161 Identities=27% Similarity=0.426 Sum_probs=126.0
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
+.||+|+||.||+|+. .+++.||||.+.... ......|.+|++++++++|+||++++++|......++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999996 468999999986432 2335679999999999999999999999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 160 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV 160 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++.++.++.++|||||||+++||++ |..|+....... ........ .... .+......+
T Consensus 161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~~~~-----~~~~---~~~~~~~~~ 225 (252)
T cd05084 161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAIEQG-----VRLP---CPELCPDAV 225 (252)
T ss_pred eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHHHcC-----CCCC---CcccCCHHH
Confidence 2999999999999999999999999999998 888876432211 11111111 0011 111223457
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+++.+|++.+|++||||.||.++|+
T Consensus 226 ~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 226 YRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 77889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=210.54 Aligned_cols=170 Identities=18% Similarity=0.263 Sum_probs=130.1
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
+|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.+++|||||++++++..++..++|+|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5777899999999999999965 58999999996432 2234678999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt 161 (333)
T cd05600 82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGS 161 (333)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
+|+|||++.+..++.++|||||||++|||+||+.|+......+... +..|. . ....+............
T Consensus 162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------~--~~~~~~~~~~~~~~s~~ 232 (333)
T cd05600 162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK-------E--TLQRPVYDDPRFNLSDE 232 (333)
T ss_pred ccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc-------c--cccCCCCCccccccCHH
Confidence 5999999999999999999999999999999999997543322111 11110 0 00111111100112234
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+.+++..|++.+|.+||++.|+++.
T Consensus 233 ~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 233 AWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHhhChhhhcCCHHHHHhC
Confidence 6677789999999999999999974
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.6e-21 Score=204.65 Aligned_cols=164 Identities=24% Similarity=0.420 Sum_probs=129.5
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+|...+.||+|+||.||+|...++..+|||.+... .....+|.+|++++++++|+||+++++++...+..++|+|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 46678899999999999999877778999998633 2235679999999999999999999999998888899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 163 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKF 163 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
+|+|||+..+..++.++|||||||++|||+| |+.|++.....+ .... ...+ .+.... .....
T Consensus 164 ~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~----~~~~-----~~~~~~---~~~~~ 228 (256)
T cd05059 164 PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVES----VSAG-----YRLYRP---KLAPT 228 (256)
T ss_pred CccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHHH----HHcC-----CcCCCC---CCCCH
Confidence 2999999999999999999999999999999 788886432211 1111 1111 111111 11234
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
++.+++.+||..+|++||||.||++.|
T Consensus 229 ~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 229 EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 578899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-21 Score=214.15 Aligned_cols=164 Identities=21% Similarity=0.273 Sum_probs=122.2
Q ss_pred CCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 646 DPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
...+.||+|+||+||+|+. .+|+.||||++.... ....+.|.+|++++++++|+|||++++++...+..++|+|
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 156 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence 3457899999999999995 468999999986432 2335679999999999999999999999999999999988
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
.|+|
T Consensus 157 ~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 236 (353)
T PLN00034 157 GSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMS 236 (353)
T ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccC
Confidence 5999
Q ss_pred hhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 724 PEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 724 PE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
||++.. ...+.++|||||||++|||++|+.||......+...+.. ..... ..+.. .......+
T Consensus 237 PE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~---~~~~~------~~~~~---~~~~~~~l 304 (353)
T PLN00034 237 PERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC---AICMS------QPPEA---PATASREF 304 (353)
T ss_pred ccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH---HHhcc------CCCCC---CCccCHHH
Confidence 998743 234568999999999999999999987332221111111 10000 00111 11122346
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++..||+.||++|||+.||++
T Consensus 305 ~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 305 RHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 77888999999999999999987
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=210.04 Aligned_cols=173 Identities=24% Similarity=0.373 Sum_probs=130.8
Q ss_pred cCCCCCCccccccceeEEEEEeCC-Cc--EEEEEEcccc-CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD-GR--VIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~-g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...++||+|+||.||+|...+ +. .+|||.++.. .....++|.+|++++.++ +|||||++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467788999999999999999753 43 4799988642 233456799999999999 799999999999877766666
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 65
Q ss_pred ---------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcC
Q 002581 720 ---------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENN 777 (905)
Q Consensus 720 ---------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~ 777 (905)
.|+|||+..+..++.++|||||||+++||+| |+.|+......+ + ... ...+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~---~~~-~~~~ 234 (297)
T cd05089 162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---L---YEK-LPQG 234 (297)
T ss_pred CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H---HHH-HhcC
Confidence 3999999999999999999999999999998 999986543221 1 111 1111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccCC
Q 002581 778 QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830 (905)
Q Consensus 778 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~~ 830 (905)
..+... ......+.+++.+||+.+|.+||++.+|+++|+...+..
T Consensus 235 -----~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 -----YRMEKP---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred -----CCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111111 112234678889999999999999999999998666543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.84 E-value=8e-21 Score=203.87 Aligned_cols=166 Identities=25% Similarity=0.423 Sum_probs=129.9
Q ss_pred hcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.++|...++||+|+||.||+|...+++.||||++.... ...++|.+|++++++++|+||+++++++. .+..++|+|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 35677789999999999999998889999999987433 34568999999999999999999999874 455778776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||+...+.++.++|||||||+++||+| |+.|+......+ +.... ..+. ...... .
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~-----~~~~~~---~ 227 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQNL----ERGY-----RMPRPD---N 227 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHHHH----HcCC-----CCCCCC---C
Confidence 4999999999999999999999999999999 999987543221 11111 1110 011111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
...++.+++.+|++.+|++||++.+++..|+
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 228 CPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 2234778888999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-21 Score=210.71 Aligned_cols=161 Identities=25% Similarity=0.403 Sum_probs=127.9
Q ss_pred CCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 648 SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
.-++|+|.||+||-|+. .+...+|||.+.....+..+-...|+...++++|+|||+.+|+|.+++..-+.||
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 35799999999999994 4566799999987766667778899999999999999999999999999888888
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence
Q ss_pred -CCCChhhhccC--CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 -GYLAPEYAMRG--HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 -gY~APE~~~~~--~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|||||++..| .|..++|||||||.+.||.|||+||........ .+++-| +--+.|.+ +.+-..
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVG--myKvHP~i---Peelsa 806 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVG--MYKVHPPI---PEELSA 806 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhc--ceecCCCC---cHHHHH
Confidence 59999999877 489999999999999999999999975432221 111111 11123333 334444
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.-..+++|.++||.+||++.++++
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhcc
Confidence 5666788999999999999999886
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-21 Score=217.69 Aligned_cols=172 Identities=23% Similarity=0.486 Sum_probs=127.1
Q ss_pred HhcCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~ 712 (905)
..++|...+.||+|+||.||+|+. .++..||||++.... ....+.+.+|+++++++ +|+|||+++|+|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 345688889999999999999873 234579999997543 22345689999999999 8999999999987655
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 4444320
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|||||++.+..++.++|||||||++|||+| |+.||........ + ......+ ..+..... ..
T Consensus 276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~----~~~~~~~-----~~~~~~~~---~~ 341 (374)
T cd05106 276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--F----YKMVKRG-----YQMSRPDF---AP 341 (374)
T ss_pred CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--H----HHHHHcc-----cCccCCCC---CC
Confidence 3999999999999999999999999999998 9999875432211 1 1111111 11111111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
..+.+++..||+.||.+|||+.+|+++|+..
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 3467788899999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=205.14 Aligned_cols=174 Identities=22% Similarity=0.358 Sum_probs=133.9
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||+||+|.. ++|+.||+|++.... ....++|.+|+++++.++|+||+++++++......++|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 3466678899999999999995 468999999986433 2345689999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~ 164 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG 164 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCcc-----chhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDT-----EKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||++.++.++.++|||||||+++||+||+.|++..... ....+.+++....... .+.+.. .
T Consensus 165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~ 236 (284)
T cd06620 165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PPRLPS--S 236 (284)
T ss_pred CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CCCCCc--h
Confidence 599999999899999999999999999999999999754332 1112223332222111 111111 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+....+.+++.+|++.||++||||.||+++..
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 13345777888999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-21 Score=205.88 Aligned_cols=167 Identities=22% Similarity=0.349 Sum_probs=130.6
Q ss_pred CCCCCCccccccceeEEEEEeC-CC---cEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DG---RVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
+|...+.||+|+||.||+|... ++ ..||||++... .....++|.+|++++++++||||+++++++..+...++|+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 3566889999999999999964 33 36999999754 2334568999999999999999999999999988899999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 164 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 164 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccc
Confidence 8
Q ss_pred -----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||++.++.++.++|||||||++||+++ |+.|+..... .....++.... . +
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~~~---------~--~ 230 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQDY---------R--L 230 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcCC---------c--C
Confidence 1899999999999999999999999999987 9999865432 12333331110 0 0
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
..+.+++..+.+++..||+.+|.+||+|.+|+++|+.
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 231 -PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred -CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 0011223446778899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-21 Score=206.70 Aligned_cols=167 Identities=28% Similarity=0.490 Sum_probs=129.6
Q ss_pred cCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
.+|....+||+|+||.||++... ++..||+|.+........+.|.+|++++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45667889999999999999742 356899999876655566789999999999999999999999998887777
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence 775
Q ss_pred ------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 ------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 ------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|+|||+..+..++.++|||||||++|||+| |+.|+......+ .... .
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~---~- 237 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE---AIEC---I- 237 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH---HHHH---H-
Confidence 3999999999999999999999999999999 888876433221 1111 1
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
..+.. +.. +......+.+++..||+.||.+||++.||.+.|+
T Consensus 238 ~~~~~-----~~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 TQGRE-----LER---PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HcCcc-----CCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11100 011 1112234677889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=203.39 Aligned_cols=171 Identities=20% Similarity=0.388 Sum_probs=129.0
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.++|...+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++.+++|+||+++++++...+..++|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34678889999999999999995 5789999999975544445678899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 167 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI 167 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence
Q ss_pred ---CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ---GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ---gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||.+. ...++.++|||||||+++||+||+.|+....+.+... . .... ....+.... ...
T Consensus 168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~-----~~~~---~~~~~~~~~-~~~ 236 (267)
T cd06646 168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L-----MSKS---NFQPPKLKD-KTK 236 (267)
T ss_pred cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--e-----eecC---CCCCCCCcc-ccc
Confidence 599999884 4568899999999999999999999986432211100 0 0000 011111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
....+.+++.+|++.+|++|||+++|++.|
T Consensus 237 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 237 WSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 223567788899999999999999998743
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=208.02 Aligned_cols=117 Identities=23% Similarity=0.431 Sum_probs=104.2
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.++|...+.||+|+||.||+|... +++.||+|.+.... ....+.|.+|++++++++|+|||+++++|...+..++|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367888999999999999999964 68899999986542 2334679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
.|+|||++.+..++.++|||||||++|||++|+.|+...
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 599999999999999999999999999999999998753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-22 Score=200.69 Aligned_cols=170 Identities=23% Similarity=0.427 Sum_probs=128.5
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeE-EEeCCe-eEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGC-CIEGAR-RLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~-~~~~~~-~~lv~ 718 (905)
+|...++||+|.||+|||+. +.+|..||.|.+.-. +...+++...|+.+|++++|||||+.+++ +.+..+ ..+||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 35556789999999999998 788999999999633 34456789999999999999999999983 333333 56666
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 6
Q ss_pred -------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.||+||.++...|+.||||||+||+++||..-+.||.+. ++.+. ...+..+ .
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L-~~KI~qg--------d 244 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSL-CKKIEQG--------D 244 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHH-HHHHHcC--------C
Confidence 699999999999999999999999999999999999854 12111 1122222 1
Q ss_pred CCCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 787 LTEFN-DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 787 l~~~~-~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
.+..+ +.-...+.+|+..|+..||+.||+.-..+..++..++
T Consensus 245 ~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~l~ 287 (375)
T KOG0591|consen 245 YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSELD 287 (375)
T ss_pred CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHHhc
Confidence 22222 2234457778889999999999997666666665444
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.3e-21 Score=207.18 Aligned_cols=173 Identities=24% Similarity=0.402 Sum_probs=131.7
Q ss_pred HHHhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEcccc-CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 639 RSATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 639 ~~~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
....++|...+.||+|+||.||+|... ....||||++... ......++.+|++++.++ +|+||++++++|..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 344567888899999999999999853 2368999998643 223345799999999999 89999999999988
Q ss_pred CCeeEEEEc-----------------------------------------------------------------------
Q 002581 711 GARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 711 ~~~~~lv~e----------------------------------------------------------------------- 719 (905)
.+..++|+|
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 877777764
Q ss_pred -------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHH
Q 002581 720 -------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLL 767 (905)
Q Consensus 720 -------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~ 767 (905)
.|+|||+..+..++.++|||||||++|||++ |..|+......+ +
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~- 243 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---L- 243 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---H-
Confidence 3999999999999999999999999999998 888876432211 1
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 768 EWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 768 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
......+.. ...+..+...+.+++.+|++.+|.+||||.||++.|+..
T Consensus 244 ---~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 244 ---FKLLKEGYR--------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred ---HHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 111111110 011112234577899999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=201.39 Aligned_cols=164 Identities=26% Similarity=0.445 Sum_probs=129.3
Q ss_pred cCCCCCCccccccceeEEEEEeCC-CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
++|...+.||+|+||.||+|...+ ++.||+|.+..... .++|.+|++++++++|+||++++|++......++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 568888999999999999999764 78999999864432 6789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI 160 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccccc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+.......... . .. ....+.+ ..+.....
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~-~~-----~~~~~~~-~~~~~~~~ 227 (256)
T cd06612 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------M-IP-----NKPPPTL-SDPEKWSP 227 (256)
T ss_pred CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------h-hc-----cCCCCCC-CchhhcCH
Confidence 5999999999999999999999999999999999987543221110 0 00 0000111 11111223
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+.+++.+|++.+|++||||.||++
T Consensus 228 ~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 228 EFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHHhcChhhCcCHHHHhc
Confidence 4677888999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-20 Score=201.29 Aligned_cols=171 Identities=23% Similarity=0.411 Sum_probs=133.7
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||+|... +|+.||+|.++.. .....+++.+|++++++++|+||+++++++...+..++|+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999965 7899999988632 2233567999999999999999999999999988889998
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 7
Q ss_pred ---------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ---------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+.... ..+.++.... ..+. . +.+.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~-~~~~----~-~~~~-- 229 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKI-EKCD----Y-PPLP-- 229 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhh-hcCC----C-CCCC--
Confidence 4999999999999999999999999999999999986432 1222222111 1111 1 1111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.......+.+++.+||..+|++|||+.+|+++|+.
T Consensus 230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 01223346778889999999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-21 Score=207.72 Aligned_cols=163 Identities=23% Similarity=0.447 Sum_probs=127.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
|+..+.||+|+||.||+|.. .+++.||||.+.... ....++|.+|++++++++|+||+++++++......++|+|
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 44456799999999999985 457899999986432 3345679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 165 (277)
T cd06642 86 GGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 165 (277)
T ss_pred CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|+|||++.+..++.++|||||||+++||+||+.|+....... ...+ .... ..+.+. ......+.
T Consensus 166 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~----~~~~-----~~~~~~---~~~~~~~~ 230 (277)
T cd06642 166 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VLFL----IPKN-----SPPTLE---GQYSKPFK 230 (277)
T ss_pred cccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HHhh----hhcC-----CCCCCC---cccCHHHH
Confidence 4999999999999999999999999999999999986433211 1111 1111 111121 12334577
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 002581 800 GVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+++.+||+.+|++||+|.||++.
T Consensus 231 ~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 231 EFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHccCCcccCcCHHHHHHh
Confidence 78899999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=201.80 Aligned_cols=163 Identities=19% Similarity=0.336 Sum_probs=128.7
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|+..+.||+|+||.||++.. .+|+.||||++... .....+++.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 366788999999999999984 46899999998643 23345689999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..+..++.|+|||||||+++||+||+.|+...... +.+..... +. ....+...
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~-~~--------~~~~~~~~ 225 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIR-GS--------YPPVSSHY 225 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhc-CC--------CCCCcccC
Confidence 499999999999999999999999999999999998643221 11212111 11 11111122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+||+.+|++||+|.||++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 334777888999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-20 Score=206.71 Aligned_cols=169 Identities=23% Similarity=0.383 Sum_probs=128.3
Q ss_pred CCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
+|...+.||+|+||.||+|+.. ....||+|.+.... ....++|.+|+.++++++|||||+++++|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3667889999999999999842 23579999986433 2335679999999999999999999999887766666
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 663
Q ss_pred ---------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhh
Q 002581 720 ---------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIY 765 (905)
Q Consensus 720 ---------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~ 765 (905)
.|+|||+..+..++.++||||||++++||+| |+.|+....+. .
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~ 237 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---R 237 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH---H
Confidence 4999999999999999999999999999999 99888644321 1
Q ss_pred HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 766 LLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 766 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+..+ ...+. ..... ......+.+++..|++.+|++||+|.|+++.|+..+
T Consensus 238 ~~~~----~~~~~-----~~~~~---~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 238 LFNL----LKTGY-----RMERP---ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHH----HhCCC-----CCCCC---CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 2222 11110 11111 112235778889999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-21 Score=207.85 Aligned_cols=175 Identities=24% Similarity=0.358 Sum_probs=128.2
Q ss_pred cCCCCCCccccccceeEEEEEeC-----CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-----DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRL 715 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~ 715 (905)
.+|...+.||+|+||+||+|... +++.||||++........+.|.+|++++++++|+|||+++|+|... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 45677889999999999999853 5789999999765555567899999999999999999999988643 3567
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 163 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence 8887
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccch---------hhHHHHHHHHhhcCc
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK---------IYLLEWAWNLHENNQ 778 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~---------~~l~~~~~~~~~~~~ 778 (905)
.|+|||+..+..++.++|||||||+++||+||+.++........ .............+
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (284)
T cd05081 164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN- 242 (284)
T ss_pred ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC-
Confidence 28999999999999999999999999999999876542211000 00000000111100
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 779 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
............+.+++.+||+.+|++||||.||++.|+.
T Consensus 243 -------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 243 -------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred -------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 0001111223457788999999999999999999999983
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=202.35 Aligned_cols=160 Identities=24% Similarity=0.374 Sum_probs=122.9
Q ss_pred ccccccceeEEEEEe---CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 650 KLGEGGYGPVYKGTL---SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~---~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
.||+|+||.||+|.+ .++..||||+++... ....++|.+|+.++++++|+||++++|+|. .+..++|+|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999975 357889999986433 223567999999999999999999999985 455677887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW 160 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||......++.++|||||||++|||+| |+.|+...... .+.+. ...+.. +..+ .....
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~----i~~~~~-----~~~~---~~~~~ 225 (257)
T cd05116 161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQM----IESGER-----MECP---QRCPP 225 (257)
T ss_pred CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHCCCC-----CCCC---CCCCH
Confidence 3899999988899999999999999999998 99998754322 12211 122111 1111 11223
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.+.+++..||+.||++||+|.+|+++|+.
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 46678889999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=203.03 Aligned_cols=164 Identities=23% Similarity=0.405 Sum_probs=128.3
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|...+.||.|+||.||+|+.. +++.||||++.... ......|.+|++++++++|+||+++++++.++...++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5667789999999999999954 68999999986543 3345679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 161 (274)
T cd06609 82 GGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161 (274)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+......+ .... .... ..+.+... .....+
T Consensus 162 ~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~~~-~~~~-----~~~~~~~~--~~~~~~ 227 (274)
T cd06609 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VLFL-IPKN-----NPPSLEGN--KFSKPF 227 (274)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HHHH-hhhc-----CCCCCccc--ccCHHH
Confidence 4999999999999999999999999999999999986433211 1111 1111 11111111 022346
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++..|+..+|++|||++++++
T Consensus 228 ~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 228 KDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHHhhCChhhCcCHHHHhh
Confidence 67888999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=204.07 Aligned_cols=175 Identities=22% Similarity=0.356 Sum_probs=130.6
Q ss_pred hcCCCCCCccccccceeEEEEEeCC-----------------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcce
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSD-----------------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVR 703 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~ 703 (905)
..+|...+.||+|+||.||+|...+ +..||+|++.... ....++|.+|++++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4567888999999999999998542 2468999987443 334568999999999999999999
Q ss_pred EEeEEEeCCeeEEEEc----------------------------------------------------------------
Q 002581 704 LYGCCIEGARRLLVYD---------------------------------------------------------------- 719 (905)
Q Consensus 704 l~g~~~~~~~~~lv~e---------------------------------------------------------------- 719 (905)
++++|...+..++|+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili 163 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence 9999988777777776
Q ss_pred ---------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh--CCCCCCCCCccchh
Q 002581 720 ---------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS--GRANSDNSLDTEKI 764 (905)
Q Consensus 720 ---------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt--g~~p~~~~~~~~~~ 764 (905)
.|||||+..++.++.++|||||||++|||+| |..|+..... .
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~---~ 240 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD---Q 240 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---H
Confidence 3999999999999999999999999999998 5666653321 1
Q ss_pred hHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 765 YLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 765 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
....++...+......... ..+.....++.+++.+|++.+|.+||||.||++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYL-----PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccC-----CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 2223332222211111111 111122345888999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=202.44 Aligned_cols=167 Identities=26% Similarity=0.425 Sum_probs=129.2
Q ss_pred hcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.++|...+.||+|+||.||+|+..+...||||++.... ...++|.+|++++++++|+||+++++++.+ ...++|+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 34577889999999999999998777789999997432 345679999999999999999999998754 45677776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||+..++.++.++|||||||+++||+| |+.|+......+ + ......+. .. ....+
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~---~----~~~~~~~~-----~~---~~~~~ 227 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---V----LDQVERGY-----RM---PCPPE 227 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH---H----HHHHhcCC-----CC---CCccc
Confidence 3999999999999999999999999999999 777776443221 1 11111110 00 11122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 34457889999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=202.19 Aligned_cols=164 Identities=20% Similarity=0.410 Sum_probs=130.6
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.|+..+.||+|+||.||+|... +++.||||.+.... ......|.+|++++++++|+||++++++|.++...++|+|
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3556788999999999999964 58899999986432 3345679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06640 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCc
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++.+..++.++|||||||+++||+||+.|+....+.... .. .... ............+
T Consensus 165 ~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~~-~~~~--------~~~~~~~~~~~~~ 229 (277)
T cd06640 165 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------FL-IPKN--------NPPTLTGEFSKPF 229 (277)
T ss_pred ccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------hh-hhcC--------CCCCCchhhhHHH
Confidence 489999999999999999999999999999999998754322111 00 0000 0112233445567
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.+++.+||+.+|++||++.+|++.
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 230 KEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHcccCcccCcCHHHHHhC
Confidence 889999999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-21 Score=205.63 Aligned_cols=164 Identities=21% Similarity=0.417 Sum_probs=127.4
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
..|.....||+|.||.||||.. ..++.||||++.... ....++..+|+.+++.++|+||.+.+|.+..+...+++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3456668899999999999994 568999999997653 3346789999999999999999999999887765555554
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfv 172 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFV 172 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccccc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|||||++....|+.|+|+||+||+.+||.+|.+|+....+.....++ .+-.-|.+.. ....
T Consensus 173 GTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI------------pk~~PP~L~~---~~S~ 237 (467)
T KOG0201|consen 173 GTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI------------PKSAPPRLDG---DFSP 237 (467)
T ss_pred ccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec------------cCCCCCcccc---ccCH
Confidence 599999999889999999999999999999999998755442211111 1112233322 2233
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+.+++..|+.++|+.||++.++++
T Consensus 238 ~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 238 PFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhh
Confidence 4666777999999999999999886
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=199.47 Aligned_cols=170 Identities=22% Similarity=0.358 Sum_probs=129.9
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.+.|....+||.|.-++||+|. .+.++.||||+++..... ..++..+|+.+|+-++|||||+.+..+..+...++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3457778899999999999998 678899999999765333 35788999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~ 184 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV 184 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence
Q ss_pred ----------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ----------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ----------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|||||+++. .-|+.|+|||||||..+||.+|..||....+.... . ..++ +.... .+ .
T Consensus 185 ~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL--l----~tLq-n~pp~-~~--t 254 (516)
T KOG0582|consen 185 TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL--L----LTLQ-NDPPT-LL--T 254 (516)
T ss_pred EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH--H----HHhc-CCCCC-cc--c
Confidence 5999999543 36999999999999999999999999865543311 1 1111 11110 00 1
Q ss_pred CCCCHH----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDK----EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~----~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+ -...+.++.-.|+++||.+|||++++++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 111111 1224667778999999999999999875
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=205.77 Aligned_cols=163 Identities=18% Similarity=0.318 Sum_probs=128.8
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|..-+.||+|+||+||||+.+ +.+.||+|.+.+... .+.+...+|++++++++|||||.++.++....+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777788999999999999954 588999999975432 335668999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
-|||||...++.|+..+|.||+||++||+.+|++||... .+.+.+..... ||.. .+.....
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~--------d~v~--~p~~~S~ 225 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILK--------DPVK--PPSTASS 225 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhc--------CCCC--CcccccH
Confidence 499999999999999999999999999999999999742 22222222221 2211 1123333
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+..+..--+.+||.+|-|..+++.
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhc
Confidence 4555666778999999999998875
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=213.34 Aligned_cols=179 Identities=19% Similarity=0.247 Sum_probs=127.2
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----eeE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RRL 715 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~~ 715 (905)
+|+..+.||+|+||+||+|.. .+|+.||||++... .....+++.+|+++++.++|+|||++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999995 57899999998643 2233567899999999999999999999998766 678
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~ 160 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH 160 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcccc
Confidence 8887
Q ss_pred --------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHH----------------HHHHh
Q 002581 720 --------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEW----------------AWNLH 774 (905)
Q Consensus 720 --------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~----------------~~~~~ 774 (905)
.|+|||++.+. .++.++|||||||+++||+||+.||......+....+.. +....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 240 (372)
T cd07853 161 MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI 240 (372)
T ss_pred CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHH
Confidence 49999999874 589999999999999999999999976543222111110 00000
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.......-..+.+.....+....+.+++.+|++.||.+|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000000000111112346778899999999999999999863
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-21 Score=207.29 Aligned_cols=173 Identities=27% Similarity=0.486 Sum_probs=132.5
Q ss_pred HHhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGA 712 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~ 712 (905)
..+++|...++||+|+||.||+|... .+..||||.+..... ....+|.+|+.++++++|+||+++++++....
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35677888999999999999999743 245899999864322 23456899999999999999999999999888
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 8888886
Q ss_pred -----------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhh
Q 002581 720 -----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHE 775 (905)
Q Consensus 720 -----------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~ 775 (905)
.|+|||+..++.++.++|||||||+++||++ |+.|+......+ ..+. ...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~---~~~ 236 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKF---VMD 236 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH---HHc
Confidence 2999999999999999999999999999999 677876432211 1111 111
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 776 NNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 776 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+. ....+..+...+.+++.+|++.+|++||||.|+++.|+..+
T Consensus 237 -~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 237 -GG--------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -CC--------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11 11111122345788889999999999999999999998543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.6e-21 Score=206.01 Aligned_cols=170 Identities=21% Similarity=0.327 Sum_probs=130.4
Q ss_pred hcCCCCCCccccccceeEEEEEeCC-----CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC-Cee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSD-----GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG-ARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~-~~~ 714 (905)
.++|...++||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++++++|+||++++|+|... ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678888999999999999999755 6889999986432 23356799999999999999999999998763 455
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++++|
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 55554
Q ss_pred -------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 -------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 -------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|+|||+.....++.++|||||||++||++| |+.|+..... ..+..++.. +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~----~~- 236 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYLKD----GY- 236 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHHHc----CC-
Confidence 3999999998899999999999999999999 9999875422 122222211 10
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
.... ...+...+.+++.+||+.+|++|||+.||++.|+..
T Consensus 237 ----~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 237 ----RLAQ---PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ----CCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0011 111223477889999999999999999999999843
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=201.65 Aligned_cols=166 Identities=27% Similarity=0.404 Sum_probs=132.0
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|...+.||+|+||.||+|... |+.||||.+..... ..++|.+|+.++++++|+||+++++++......++|+|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46777899999999999999975 78999999975543 46789999999999999999999999998888899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
+|+|||++.++.++.++||||||++++||++ |+.|+...... .+.. ....+.. +.. +......+
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~-----~~~---~~~~~~~~ 228 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----HVEKGYR-----MEA---PEGCPPEV 228 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHhcCCC-----CCC---ccCCCHHH
Confidence 4999999999999999999999999999998 88888644221 1111 1111110 111 11123447
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.+++.+|++.+|++||++.|++++|+.
T Consensus 229 ~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 229 YKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 778889999999999999999999973
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=202.04 Aligned_cols=168 Identities=27% Similarity=0.437 Sum_probs=133.3
Q ss_pred HhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
..++|...++||+|+||.||+|...+++.||||.+... ....++|.+|++++++++|+||+++++++......++|+|
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 35678888999999999999999888889999998743 2345789999999999999999999999998888899887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 162 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE 162 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||+..+..++.++|||||||+++||+| |+.|+...... ...+.+.. + ...... .
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~~~----~-----~~~~~~---~ 227 (261)
T cd05034 163 GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQVER----G-----YRMPRP---P 227 (261)
T ss_pred ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHc----C-----CCCCCC---C
Confidence 3999999999999999999999999999999 89888643221 11111111 0 000011 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.....+.+++.+|++.+|++||+++++.+.|+
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 228 NCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 11335778889999999999999999999887
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-20 Score=207.70 Aligned_cols=170 Identities=22% Similarity=0.417 Sum_probs=131.2
Q ss_pred hcCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCe
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~ 713 (905)
.++|...+.||+|+||.||+|.. .++..||||+++... ....+.|.+|+++++++ +|+||++++++|...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 35688889999999999999973 134579999987543 23346799999999999 79999999999999988
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 999987
Q ss_pred --------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccC
Q 002581 720 --------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 --------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
.|+|||+...+.++.++|||||||++|||+| |+.|+......+ .+..+ ...+. .
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~~~~----~~~~~-----~ 262 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KFYKL----IKEGY-----R 262 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HHHHH----HHcCC-----c
Confidence 3999999999999999999999999999998 899886543221 11111 11110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
+.... .....+.+++.+|++.+|++|||+.||++.|+.
T Consensus 263 ~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 263 MAQPE---HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 01111 112347788899999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-20 Score=204.40 Aligned_cols=170 Identities=24% Similarity=0.401 Sum_probs=125.6
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCc----EEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGR----VIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...+.||+|+||+||+|.+ .+++ .||+|++..... ...+++..|+..+++++|+|||+++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-SLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-ccEE
Confidence 3566778999999999999995 3454 478888754322 2346788899999999999999999998643 4455
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
++|
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK 165 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcc
Confidence 665
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
+|+|||+..++.++.++|||||||++|||+| |+.|+......+ +.+++ ..+. ....+..
T Consensus 166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~----~~~~--~~~~~~~- 235 (279)
T cd05111 166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDLL----EKGE--RLAQPQI- 235 (279)
T ss_pred cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH----HCCC--cCCCCCC-
Confidence 4999999999999999999999999999998 998986543221 22221 1111 1111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
+...+.+++.+||+.+|.+||||.|+++.|+....
T Consensus 236 -----~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 236 -----CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 22346678889999999999999999999986443
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=203.04 Aligned_cols=168 Identities=21% Similarity=0.343 Sum_probs=130.5
Q ss_pred cCCCCCCccccccceeEEEEEeC----CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS----DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.+|...+.||+|+||.||+|+.. ++..||||.++... ....+.|.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45777899999999999999853 23479999986432 23356799999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence 98
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||++.+..++.++|||||||+++|+++ |+.|+......+ ...++. ++. .+..
T Consensus 164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~----~~~-----~~~~- 230 (267)
T cd05066 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIE----EGY-----RLPA- 230 (267)
T ss_pred eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHh----CCC-----cCCC-
Confidence 2899999999999999999999999999887 999986543221 222221 110 0011
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.......+.+++.+|++.+|.+||+|.+|++.|+.
T Consensus 231 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 231 --PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred --CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 11123346778899999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=202.63 Aligned_cols=173 Identities=24% Similarity=0.382 Sum_probs=130.1
Q ss_pred CCCCCCccccccceeEEEEEeC-----CCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEe--CCeeE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-----DGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIE--GARRL 715 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~--~~~~~ 715 (905)
.|...+.||+|+||.||+|++. +++.||||++...... ..++|.+|++++++++|+||++++++|.. +...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4556688999999999999864 3688999999754332 46789999999999999999999999987 55678
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD 164 (284)
T ss_pred EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence 8887
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchh---------hHHHHHHHHhhcCc
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI---------YLLEWAWNLHENNQ 778 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~---------~l~~~~~~~~~~~~ 778 (905)
.|+|||+..+..++.++||||||++++||+||+.|+......... ....+. .....+.
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 243 (284)
T cd05038 165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL-ELLKEGE 243 (284)
T ss_pred ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH-HHHHcCC
Confidence 289999999999999999999999999999999997643221100 011111 1111110
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 779 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.. ..+..+..++.+++.+||+.+|++||||.||+++|+.
T Consensus 244 -------~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 244 -------RL-PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred -------cC-CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 00 1112233558889999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=204.10 Aligned_cols=158 Identities=25% Similarity=0.409 Sum_probs=120.7
Q ss_pred ccccccceeEEEEEeCC-------------------------CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceE
Q 002581 650 KLGEGGYGPVYKGTLSD-------------------------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~~~-------------------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l 704 (905)
.||+|+||.||+|.+.. ...||||++........++|.+|++++++++|+|||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998521 13589999975444445679999999999999999999
Q ss_pred EeEEEeCCeeEEEEc-----------------------------------------------------------------
Q 002581 705 YGCCIEGARRLLVYD----------------------------------------------------------------- 719 (905)
Q Consensus 705 ~g~~~~~~~~~lv~e----------------------------------------------------------------- 719 (905)
+|+|.+....++|+|
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~ 161 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP 161 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence 999999999999998
Q ss_pred -----------------------CCCChhhhcc-CCCCccCceEeechhhHHhH-hCCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 -----------------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVI-SGRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 -----------------------gY~APE~~~~-~~~t~k~DVySfGvvLlEll-tg~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|+|||++.+ ..++.++|||||||++|||+ +|+.|+......+. ..+ .
T Consensus 162 ~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~~~----~ 234 (274)
T cd05076 162 FIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK---ERF----Y 234 (274)
T ss_pred eeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH---HHH----H
Confidence 4999998876 56899999999999999994 78888865433221 111 1
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
... ..+... ....+.+++..||+.+|++||||.+|++.|.
T Consensus 235 ~~~-------~~~~~~---~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EKK-------HRLPEP---SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred Hhc-------cCCCCC---CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 100 011110 1124677889999999999999999999773
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=203.20 Aligned_cols=174 Identities=22% Similarity=0.365 Sum_probs=128.4
Q ss_pred cCCCCCCccccccceeEEEEEeCC---------------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEe
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD---------------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYG 706 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~---------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g 706 (905)
++|...+.||+|+||.||++...+ ...||||+++... ......|.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467788999999999999987532 2358999996532 233567999999999999999999999
Q ss_pred EEEeCCeeEEEEc-------------------------------------------------------------------
Q 002581 707 CCIEGARRLLVYD------------------------------------------------------------------- 719 (905)
Q Consensus 707 ~~~~~~~~~lv~e------------------------------------------------------------------- 719 (905)
+|......++|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~ 164 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN 164 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence 9998888888887
Q ss_pred -------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh--CCCCCCCCCccchhhH
Q 002581 720 -------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS--GRANSDNSLDTEKIYL 766 (905)
Q Consensus 720 -------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt--g~~p~~~~~~~~~~~l 766 (905)
.|+|||+...+.++.++|||||||+++||+| |..|+......+ .
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~ 241 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---V 241 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH---H
Confidence 3999999999999999999999999999998 455665432211 2
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 767 LEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 767 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
...+......... .... ..+......+.+++.+||+.+|++||+|.+|++.|+
T Consensus 242 ~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 242 IENTGEFFRNQGR-QIYL----SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHhhhhccc-cccC----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 2222111111100 0000 001112235888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=229.69 Aligned_cols=281 Identities=22% Similarity=0.310 Sum_probs=163.0
Q ss_pred eEEEEEeccCc------ccCCCCccccCCC-CCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCC
Q 002581 53 HITKLRVYALN------KKGVIPEELVTLQ-YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125 (905)
Q Consensus 53 ~l~~L~l~~~~------l~g~ip~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~ 125 (905)
+++.|++..+. ....+|..+..++ +|+.|++.++.+. .+|..| .+.+|+.|+|.+|.+. .+|..+..+++
T Consensus 559 ~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~ 635 (1153)
T PLN03210 559 NLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTG 635 (1153)
T ss_pred cccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCC
Confidence 45555554332 2234555555553 4777777766664 556555 4567777777777665 45666667777
Q ss_pred CCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeeccc
Q 002581 126 LNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQG 205 (905)
Q Consensus 126 L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~ 205 (905)
|++|+|++|...+.+|. +..+++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++
T Consensus 636 Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsg 713 (1153)
T PLN03210 636 LRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSG 713 (1153)
T ss_pred CCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCC
Confidence 77777776654445553 6666777777777766666677777777777777777665555666554 566677777766
Q ss_pred ccCCCCCCccccCCCCCCEEEecCcccCCCChh-----------------------------hhhCCCcccccccccccc
Q 002581 206 NSFQGPIPSSLSKLASLESLRISDIYFVSSSLD-----------------------------FVMSLKNLKDLSLRNALI 256 (905)
Q Consensus 206 N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~-----------------------------~~~~l~~L~~L~L~~N~l 256 (905)
|...+.+|.. .++|+.|++++|.+...+.. .....++|+.|+|++|..
T Consensus 714 c~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~ 790 (1153)
T PLN03210 714 CSRLKSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPS 790 (1153)
T ss_pred CCCccccccc---cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCC
Confidence 6544444432 23555666655543321110 111234566666666655
Q ss_pred cCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCCCCCCCEEEeecCCCCCCCCcccc-
Q 002581 257 TGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT- 335 (905)
Q Consensus 257 ~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~lsg~ip~~~~- 335 (905)
.+.+|.+++++++|+.|+|++|...+.+|..+ ++++|+.|+|++|.....+|. ...+|+.|+|++|.++ .+|.++.
T Consensus 791 l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~-~~~nL~~L~Ls~n~i~-~iP~si~~ 867 (1153)
T PLN03210 791 LVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD-ISTNISDLNLSRTGIE-EVPWWIEK 867 (1153)
T ss_pred ccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-cccccCEeECCCCCCc-cChHHHhc
Confidence 55666666666666666666655444555544 466666666666544444443 2345666666666665 3555443
Q ss_pred -cccc-ccccc
Q 002581 336 -SSLQ-MNLAV 344 (905)
Q Consensus 336 -~~l~-l~l~~ 344 (905)
..++ |++++
T Consensus 868 l~~L~~L~L~~ 878 (1153)
T PLN03210 868 FSNLSFLDMNG 878 (1153)
T ss_pred CCCCCEEECCC
Confidence 3344 55544
|
syringae 6; Provisional |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-20 Score=202.34 Aligned_cols=166 Identities=23% Similarity=0.378 Sum_probs=130.6
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+|...+.||+|+||.||+|+. .+++.||||.+........+.+.+|+.++++++|+||++++++|..+...++|+|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4677778899999999999984 5689999999976555556779999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 179 (296)
T cd06654 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179 (296)
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||+..+..++.++|||||||+++||+||+.||......+ .+. .....+ . +.+. .+......+
T Consensus 180 ~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~----~~~~~~-~-----~~~~-~~~~~~~~l 246 (296)
T cd06654 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALY----LIATNG-T-----PELQ-NPEKLSAIF 246 (296)
T ss_pred ccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHH----HHhcCC-C-----CCCC-CccccCHHH
Confidence 4999999999999999999999999999999999987543211 111 111111 0 1110 111122346
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++.+|++.+|++||++.||++
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhh
Confidence 67888999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-20 Score=204.03 Aligned_cols=174 Identities=21% Similarity=0.358 Sum_probs=128.5
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEEEc
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLVYD 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv~e 719 (905)
|...+.||+|.||.||||+ +.+|+.||+|+++... .....-..|||.+|+++.|||||+|.+...+. ...|||+|
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe 198 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE 198 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence 4445679999999999999 6789999999997654 34456678999999999999999999998876 68899998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 199 YMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~ 278 (560)
T KOG0600|consen 199 YMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTS 278 (560)
T ss_pred cccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCccccc
Confidence
Q ss_pred -----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc--Cccc--------ccc
Q 002581 720 -----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN--NQSL--------GLV 783 (905)
Q Consensus 720 -----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~--------~~~ 783 (905)
.|.|||.+.+. .|+.+.|+||.||||.||++||+.+.+...-++.+.+ +.++.. .... ..+
T Consensus 279 rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI---fklcGSP~e~~W~~~kLP~~~~~ 355 (560)
T KOG0600|consen 279 RVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI---FKLCGSPTEDYWPVSKLPHATIF 355 (560)
T ss_pred ceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH---HHHhCCCChhccccccCCccccc
Confidence 69999999875 7999999999999999999999998876554444332 222210 0000 111
Q ss_pred CCCC------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 784 DPTL------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 d~~l------~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.|.- .+.-..-....+.+.-..+..||++|.|+.++++
T Consensus 356 kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 356 KPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111 0000011123566667788899999999999986
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-20 Score=212.83 Aligned_cols=173 Identities=21% Similarity=0.384 Sum_probs=129.0
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGA 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~ 712 (905)
..+.|...++||+|+||.||+|+.. .+..||||++.... ....+.|.+|+++++++. |||||+++|+|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3567778899999999999999842 13479999996433 233567999999999996 999999999997765
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 5555430
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence
Q ss_pred -----------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHH
Q 002581 720 -----------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEW 769 (905)
Q Consensus 720 -----------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~ 769 (905)
.|||||++.+..++.++|||||||++|||+| |+.|+......+. +
T Consensus 275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~--- 349 (400)
T cd05105 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--F--- 349 (400)
T ss_pred EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--H---
Confidence 3999999999999999999999999999997 8888865332111 1
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 770 AWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 770 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
......+. .+. .+......+.+++..||+.+|++||+|.+|+++|+...
T Consensus 350 -~~~~~~~~-----~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 -YNKIKSGY-----RMA---KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred -HHHHhcCC-----CCC---CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11111111 011 11223345778999999999999999999999998543
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-20 Score=207.23 Aligned_cols=157 Identities=20% Similarity=0.227 Sum_probs=122.5
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
++||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 568999999996432 2234568899999999999999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence 5
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIG 800 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 800 (905)
|||||.+.+..++.++|||||||+++||+||+.||...... .+...+ ..+ +..++. .....+.+
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~~----~~~------~~~~p~---~~~~~~~~ 224 (323)
T cd05571 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELI----LME------EIRFPR---TLSPEAKS 224 (323)
T ss_pred ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH---HHHHHH----HcC------CCCCCC---CCCHHHHH
Confidence 99999999999999999999999999999999998753221 111111 111 111111 11223566
Q ss_pred HHHHhccCCCCCCC-----CHHHHHH
Q 002581 801 VALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 801 l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
++..|++.||++|| ++.++++
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 225 LLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 77899999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-20 Score=208.83 Aligned_cols=163 Identities=19% Similarity=0.242 Sum_probs=125.9
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.+++|||||++++++...+..++|+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45777889999999999999964 68999999986431 233467999999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g 177 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG 177 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence 8
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|+|||++.+..++.++|||||||++|||+||+.||......+ .. ....++. ..++.... ..
T Consensus 178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~----~~i~~~~------~~~p~~~~---~~ 241 (329)
T PTZ00263 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IY----EKILAGR------LKFPNWFD---GR 241 (329)
T ss_pred ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HH----HHHhcCC------cCCCCCCC---HH
Confidence 4999999999999999999999999999999999987432211 11 1111111 11111111 23
Q ss_pred HHHHHHHhccCCCCCCCC-----HHHHHH
Q 002581 798 VIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPs-----m~ev~~ 821 (905)
+.+++..|++.||.+||+ +.|++.
T Consensus 242 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 242 ARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 567888999999999997 566553
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-20 Score=197.75 Aligned_cols=165 Identities=28% Similarity=0.447 Sum_probs=121.1
Q ss_pred CccccccceeEEEEEeCC---CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTLSD---GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
+.||+|+||.||+|+..+ +..+|+|.++... ......|.+|+.++++++|||||+++|+|.+....++|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 469999999999998643 4579999986543 2334579999999999999999999999998888889887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence
Q ss_pred ------CCCChhhhccC-------CCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 ------GYLAPEYAMRG-------HLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 ------gY~APE~~~~~-------~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|+|||++... .++.++|||||||++|||+| |+.|+......+. ..+. ..+......++
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~~----~~~~~~~~~~~ 233 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTYT----VREQQLKLPKP 233 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHHH----hhcccCCCCCC
Confidence 39999998642 36889999999999999997 9999865432221 1111 11111223333
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+.....+ .+.+++..|| .+|++|||++||++.|+
T Consensus 234 ~~~~~~~~---~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 234 RLKLPLSD---RWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccCCCCCh---HHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 33222222 3555677898 58999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-20 Score=200.98 Aligned_cols=168 Identities=23% Similarity=0.381 Sum_probs=126.2
Q ss_pred HHHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC-----
Q 002581 639 RSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG----- 711 (905)
Q Consensus 639 ~~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~----- 711 (905)
+.+++.|...+.||+|+||.||+|... +++.||||++.... ....++.+|+.++.++ +|+||++++|+|...
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 356778888899999999999999954 58899999986432 3456789999999999 799999999999753
Q ss_pred -CeeEEEEc-----------------------------------------------------------------------
Q 002581 712 -ARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 712 -~~~~lv~e----------------------------------------------------------------------- 719 (905)
...++|+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 35788887
Q ss_pred ---------------CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 ---------------GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 ---------------gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|+|||++. ...++.++|||||||++|||+||+.|++....... +. . ......
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-----~~-~-~~~~~~ 233 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LF-L-IPRNPA 233 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-----HH-H-HhcCCC
Confidence 499999986 34688999999999999999999999864332111 10 0 011111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+ . .....+.+++.+||+.+|.+|||+.||++
T Consensus 234 ~~~~~---~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 234 PRLKS---K----KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCC---C----CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11111 1 12234677888999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-20 Score=198.41 Aligned_cols=164 Identities=15% Similarity=0.254 Sum_probs=127.5
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|...+.||+|+||.||+++. .+++.+|+|.++.. .....+.+.+|+.++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 356678999999999999995 46889999998643 23345678999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|+|||+..+..++.++||||||++++||++|+.|++...... ...... .+.. .+ + +....
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~-~~~~----~~-~---~~~~~ 225 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------LILKVC-QGSY----KP-L---PSHYS 225 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------HHHHHh-cCCC----CC-C---CcccC
Confidence 3999999999999999999999999999999999987532211 111111 1111 11 1 11122
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
..+.+++.+||+.+|++||++.+|+..
T Consensus 226 ~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 226 YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 346678889999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-21 Score=205.01 Aligned_cols=181 Identities=22% Similarity=0.298 Sum_probs=127.5
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHh--hCCCCCcceEEeEEEeCC----eeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATIS--AVQHRNLVRLYGCCIEGA----RRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~~~H~niv~l~g~~~~~~----~~~l 716 (905)
.......+||+|+||.||||++.+ +.||||++. .+..+.|.+|-++.+ .++|+||++++|+-..++ +.+|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-ceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 344556889999999999999964 899999997 345677988877766 568999999999987766 8889
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|++
T Consensus 286 Vt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred EeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 987
Q ss_pred -----------------CCCChhhhccCC-CC-----ccCceEeechhhHHhHhCCCCCCCC-CccchhhHHHHHHHH--
Q 002581 720 -----------------GYLAPEYAMRGH-LT-----EKADVFSFGVVALEVISGRANSDNS-LDTEKIYLLEWAWNL-- 773 (905)
Q Consensus 720 -----------------gY~APE~~~~~~-~t-----~k~DVySfGvvLlElltg~~p~~~~-~~~~~~~l~~~~~~~-- 773 (905)
+|||||++.+.. +. .+.||||.|.|||||+++..-.+.. .++-+.-+-..+...
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 699999997642 22 4689999999999999987665421 111111111111100
Q ss_pred ---hhcCccccccCCCCCCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 774 ---HENNQSLGLVDPTLTEFN--DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 774 ---~~~~~~~~~~d~~l~~~~--~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+++-.+.+-.+|.+++.. ...+..+.+.+..||..||+.|-|+.-|-+++....
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 000011223345553322 234556778889999999999999999999887443
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-20 Score=199.41 Aligned_cols=160 Identities=21% Similarity=0.350 Sum_probs=122.4
Q ss_pred ccccccceeEEEEEeC---CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc------
Q 002581 650 KLGEGGYGPVYKGTLS---DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------ 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------ 719 (905)
.||+|+||.||+|++. ++..||||++..... ...++|.+|++++++++|+|||+++|+|. .+..++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999853 356799999975432 23467999999999999999999999985 456678887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW 160 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||+..+..++.++|||||||++||+++ |+.|+......+ +... ...+.. +.. +..+..
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~~~-----~~~---~~~~~~ 225 (257)
T cd05115 161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSF----IEQGKR-----LDC---PAECPP 225 (257)
T ss_pred CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHH----HHCCCC-----CCC---CCCCCH
Confidence 3999999998899999999999999999997 999987543221 1111 111111 111 112234
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
++.+++..||+.+|++||+|.+|.+.|+.
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 56778899999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-20 Score=204.07 Aligned_cols=166 Identities=22% Similarity=0.400 Sum_probs=130.5
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+|...+.||.|+||.||+|.. .+++.||||.+........+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4577788999999999999984 5789999999976555556789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 178 (296)
T cd06655 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 178 (296)
T ss_pred CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||...+..++.++|||||||++|||+||+.|+......+.. ...... .. +.+ ..+......+
T Consensus 179 ~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~-~~-----~~~-~~~~~~~~~~ 245 (296)
T cd06655 179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATN-GT-----PEL-QNPEKLSPIF 245 (296)
T ss_pred ccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhc-CC-----ccc-CCcccCCHHH
Confidence 599999999999999999999999999999999998754322211 111110 00 001 0111122246
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++.+||+.+|.+||++.+|++
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhh
Confidence 67788999999999999999996
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-20 Score=201.95 Aligned_cols=175 Identities=21% Similarity=0.358 Sum_probs=121.9
Q ss_pred CCCCCCccccccceeEEEEEe-C-CCcEEEEEEccccC--cccHHHHHHHHHHHhhC---CCCCcceEEeEEEe-----C
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-S-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAV---QHRNLVRLYGCCIE-----G 711 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~---~H~niv~l~g~~~~-----~ 711 (905)
+|...+.||+|+||+||+|+. . +++.||||+++... ......+.+|+++++++ +|||||+++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 577788999999999999985 3 46889999986432 22245677888877765 69999999999862 3
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 45678877
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh---cCcc-----
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE---NNQS----- 779 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~---~~~~----- 779 (905)
.|+|||.+....++.++|||||||++|||+||+.||......+ ....+..... ....
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 162 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred CCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhchhhhc
Confidence 5999999999999999999999999999999999987643322 1111111110 0000
Q ss_pred --ccccCCCCCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 --LGLVDPTLTE----FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 --~~~~d~~l~~----~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+++.... ........+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0011111000 00111233567889999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-20 Score=200.35 Aligned_cols=163 Identities=27% Similarity=0.385 Sum_probs=120.8
Q ss_pred CccccccceeEEEEEeC----CCcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CCeeEEEEc---
Q 002581 649 NKLGEGGYGPVYKGTLS----DGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIE-GARRLLVYD--- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~~~~lv~e--- 719 (905)
++||+|+||.||+|+.. ++..||||++... .....+.|.+|+.++++++|||||+++|+|.. ++..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46999999999999853 2457999998543 23345689999999999999999999998864 445677776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 160 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCC-CCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRAN-SDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||++.+..++.|+|||||||++|||+||+.| +.... ...+..++ .. +. .+....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~---~~-~~-----~~~~~~--- 225 (262)
T cd05058 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYL---LQ-GR-----RLLQPE--- 225 (262)
T ss_pred cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH---hc-CC-----CCCCCC---
Confidence 39999999999999999999999999999996554 43221 11222221 11 10 011111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
..+..+.+++..||+.+|++||++.||+++|+..
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1223577899999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-20 Score=203.22 Aligned_cols=157 Identities=18% Similarity=0.219 Sum_probs=120.2
Q ss_pred cccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||+||+|... +++.||||++... .......+.+|++++.+++|||||+++++|...+..++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999954 5889999998643 22345678999999999999999999999999999999998
Q ss_pred -----------------------------------------------------------------------------CCC
Q 002581 720 -----------------------------------------------------------------------------GYL 722 (905)
Q Consensus 720 -----------------------------------------------------------------------------gY~ 722 (905)
+||
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 160 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL 160 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence 599
Q ss_pred ChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 002581 723 APEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVA 802 (905)
Q Consensus 723 APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~ 802 (905)
|||++.+..++.++|||||||+++||+||+.||...... +....... +. ..+.. .....+.+++
T Consensus 161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~-~~------~~~~~---~~~~~~~~li 224 (312)
T cd05585 161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQ-EP------LRFPD---GFDRDAKDLL 224 (312)
T ss_pred CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHc-CC------CCCCC---cCCHHHHHHH
Confidence 999999999999999999999999999999998743211 11111111 11 11111 1122356677
Q ss_pred HHhccCCCCCCCCHHHHHHHH
Q 002581 803 LLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 803 ~~C~~~~P~~RPsm~ev~~~L 823 (905)
..|++.||.+||++.++.+.|
T Consensus 225 ~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 225 IGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHcCCCHHHcCCCCCHHHHH
Confidence 899999999998755444444
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-20 Score=200.32 Aligned_cols=167 Identities=25% Similarity=0.402 Sum_probs=127.3
Q ss_pred CCCCCCccccccceeEEEEEeCC--CcEEEEEEccccC----------cccHHHHHHHHHHHhh-CCCCCcceEEeEEEe
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSD--GRVIAVKQLSIAS----------HQGKNQFVNEIATISA-VQHRNLVRLYGCCIE 710 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~--g~~vAvK~l~~~~----------~~~~~~f~~E~~~l~~-~~H~niv~l~g~~~~ 710 (905)
+|+..+.||+|+||.||+|.... ++.+|||.+.... .....++.+|+.++.+ ++|+||++++++|..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999754 6889999885321 1224568889998875 799999999999999
Q ss_pred CCeeEEEEc-----------------------------------------------------------------------
Q 002581 711 GARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 711 ~~~~~lv~e----------------------------------------------------------------------- 719 (905)
++..++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 999999987
Q ss_pred -----------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccc
Q 002581 720 -----------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -----------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 782 (905)
.|+|||+..++.++.++|||||||++|||+||+.|+...... ........ +..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~~~-~~~--- 230 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKIVE-AVY--- 230 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHHhh-ccC---
Confidence 599999999999999999999999999999999998643211 11111111 111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 783 VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 783 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+.... .....+.+++.+||+.||++||+|.||.++++
T Consensus 231 -~~~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 -EPLPEG---MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -CcCCcc---cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111 11234667888999999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.7e-20 Score=197.15 Aligned_cols=169 Identities=20% Similarity=0.384 Sum_probs=131.9
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.++|...+.||+|+||.||+|.. .+++.+|+|.+........+.+.+|++++++++|+||++++|++..+...++++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 35677889999999999999996 4578899999976555566789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence
Q ss_pred ----CCCChhhhccC---CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 ----GYLAPEYAMRG---HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ----gY~APE~~~~~---~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||...+. .++.++|||||||++|||+||+.|+......+... .... . .+.+.......
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~------~~~~-~----~~~~~~~~~~~ 230 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF------LISK-S----NFPPPKLKDKE 230 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHh-c----cCCCccccchh
Confidence 49999999877 89999999999999999999999987543222111 0000 0 01111111112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+.+++.+||+.+|.+|||+.+|+.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 231 KWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 23345778889999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-20 Score=202.34 Aligned_cols=168 Identities=26% Similarity=0.471 Sum_probs=130.7
Q ss_pred hcCCCCCCccccccceeEEEEEeCC------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSD------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
.++|...+.||+|+||.||+|...+ +..||||.+.... .....+|.+|++++.+++|+||++++|++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3567778999999999999998642 3689999986432 23356799999999999999999999999888888
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence 88876
Q ss_pred ---------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcC
Q 002581 720 ---------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENN 777 (905)
Q Consensus 720 ---------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~ 777 (905)
+|+|||++.++.++.++|||||||++||++| |+.|+......+ +.++.. .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~----~~ 237 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFVI----DG 237 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHHh----cC
Confidence 4999999999999999999999999999999 888886433221 222221 11
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 778 QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 778 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.. +.. +......+.+++..||+.+|++|||+.|+++.|+
T Consensus 238 ~~-----~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 GH-----LDL---PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CC-----CCC---CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11 111 1112345778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-20 Score=209.15 Aligned_cols=174 Identities=18% Similarity=0.280 Sum_probs=123.1
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----eeEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RRLL 716 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~~l 716 (905)
|...++||+|+||.||+|+. .+|+.||||++... ......++.+|++++++++|||||++++++.... ..++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 56678999999999999995 46899999998643 2233457899999999999999999999986432 4688
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 82 v~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 161 (338)
T cd07859 82 VFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 161 (338)
T ss_pred EEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccc
Confidence 887
Q ss_pred ---------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh-----------cC
Q 002581 720 ---------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE-----------NN 777 (905)
Q Consensus 720 ---------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~ 777 (905)
.|+|||++.+ ..++.++|||||||+++||+||+.||........ ..++..... ..
T Consensus 162 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~ 238 (338)
T cd07859 162 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ---LDLITDLLGTPSPETISRVRNE 238 (338)
T ss_pred cccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhhhh
Confidence 4899999876 6899999999999999999999999865432111 111111100 00
Q ss_pred ccccc---cCCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 778 QSLGL---VDPTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 ~~~~~---~d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+. +.+.. ..........+.+++.+|++.+|++|||+.||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000 0000011234667889999999999999999986
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-20 Score=199.11 Aligned_cols=158 Identities=24% Similarity=0.403 Sum_probs=119.2
Q ss_pred CccccccceeEEEEEeCC-------------CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeE
Q 002581 649 NKLGEGGYGPVYKGTLSD-------------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~-------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
+.||+|+||.||+|++.+ ...||||.+..........|.+|+.+++.++|||||+++|+|......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999987554444567999999999999999999999999888888
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 8887
Q ss_pred ------------CCCChhhhc-cCCCCccCceEeechhhHHhH-hCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 ------------GYLAPEYAM-RGHLTEKADVFSFGVVALEVI-SGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 ------------gY~APE~~~-~~~~t~k~DVySfGvvLlEll-tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|||||++. +..++.++|||||||++|||+ +|+.|+......+. .. .. .+.. ..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~---~~-~~~~-~~--- 228 (262)
T cd05077 161 TVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK----ER---FY-EGQC-ML--- 228 (262)
T ss_pred cccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH----HH---HH-hcCc-cC---
Confidence 499999987 467999999999999999998 57777654321111 00 11 1100 00
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
.... ...+.+++.+||+.||.+||++.++++.+
T Consensus 229 -~~~~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 229 -VTPS----CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -CCCC----hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0111 23467788899999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-20 Score=197.34 Aligned_cols=161 Identities=27% Similarity=0.468 Sum_probs=124.7
Q ss_pred CccccccceeEEEEEeCC--C--cEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLSD--G--RVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~--g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|.+.+ + ..||||.+..... ...++|.+|++++++++|+|||++++++.. ...++|+|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999976544 456789999999999999999999999887 77788877
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
+|+|||++.+..++.++|||||||++|||+| |+.|+......+ +.... ...... . ..+..
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~---~~~~~~-------~-~~~~~ 225 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKI---DKEGER-------L-ERPEA 225 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---HhcCCc-------C-CCCcc
Confidence 4999999999999999999999999999999 999986433221 11111 111100 0 01112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
....+.+++..|++.+|++||++.||++.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 2345778889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-20 Score=201.25 Aligned_cols=179 Identities=18% Similarity=0.252 Sum_probs=128.1
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...++||+|+||+||+|... +++.||||+++... ......+.+|++++++++|||||++++++...+..++|+|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 45777899999999999999854 68999999986433 2234568899999999999999999999998888999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~ 164 (288)
T cd07871 85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV 164 (288)
T ss_pred CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCce
Confidence
Q ss_pred ---CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH-----Hhh----cCccccccCCC
Q 002581 720 ---GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN-----LHE----NNQSLGLVDPT 786 (905)
Q Consensus 720 ---gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~-----~~~----~~~~~~~~d~~ 786 (905)
.|+|||++.+ ..++.++||||+||++|||+||+.||......+....+..... .+. .....+...+.
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (288)
T cd07871 165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ 244 (288)
T ss_pred ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence 5999999875 5689999999999999999999999875443322211110000 000 00000111111
Q ss_pred CCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LTEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+ ......+.+++.+|++.||.+|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 10000 011224567888999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-20 Score=202.65 Aligned_cols=175 Identities=20% Similarity=0.293 Sum_probs=129.3
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||.||++.. .++..||+|.+.... ....+++.+|++++.+++|||||+++++|..++..++|+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688889999999999999995 468899999986432 2234569999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 160 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccc-----------------
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL----------------- 780 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~----------------- 780 (905)
.|+|||+..+..++.++|||||||+++||+||+.|+...... .+..+...........
T Consensus 161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06615 161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK---ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM 237 (308)
T ss_pred CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh---hHHHhhcCccccccccCCcccccCCCCCccchh
Confidence 599999998888999999999999999999999998643211 1111111000000000
Q ss_pred ---ccc-------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 781 ---GLV-------DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 781 ---~~~-------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+.. .|.++. ......+.+++.+|++.+|++|||+.||++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 238 AIFELLDYIVNEPPPKLPS--GAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hHHHHHHHHhcCCCccCcC--cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 011100 0012346788899999999999999999974
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-20 Score=202.93 Aligned_cols=167 Identities=23% Similarity=0.417 Sum_probs=127.8
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.+.|...+.||+|+||+||+|+.. +++.||+|++..... ...+++.+|++++++++||||++++|+|...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 345777889999999999999954 689999999864322 2345799999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (307)
T cd06607 94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVG 173 (307)
T ss_pred HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccC
Confidence 87
Q ss_pred --CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 --GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 --gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||++. .+.++.++|||||||++|||+||+.|+....... . ...... .. .+.+. ....
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~---~---~~~~~~-~~-----~~~~~--~~~~ 239 (307)
T cd06607 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---A---LYHIAQ-ND-----SPTLS--SNDW 239 (307)
T ss_pred CccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH---H---HHHHhc-CC-----CCCCC--chhh
Confidence 599999874 4678999999999999999999999986432211 1 111111 00 01111 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...+.+++.+||+.+|++||+|.+|+..
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 240 SDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 3457778889999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-20 Score=200.10 Aligned_cols=163 Identities=22% Similarity=0.362 Sum_probs=123.6
Q ss_pred CccccccceeEEEEEeCC-Cc--EEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLSD-GR--VIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+..+ +. .+|+|.+.... ....+.|.+|++++.++ +||||++++++|...+..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 469999999999999753 43 57899886432 33456799999999999 89999999999988777777775
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence
Q ss_pred ---------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcccccc
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLV 783 (905)
Q Consensus 720 ---------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 783 (905)
.|+|||++....++.++|||||||+++||+| |+.|+......+ +. .....+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~----~~~~~~~~---- 229 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LY----EKLPQGYR---- 229 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HH----HHHhCCCC----
Confidence 3999999999999999999999999999997 999986432211 11 11111100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 784 DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 784 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
... +......+.+++.+||+.+|.+|||+.|++++|+..
T Consensus 230 -~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 230 -LEK---PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred -CCC---CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 011 111223477889999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-20 Score=196.91 Aligned_cols=161 Identities=27% Similarity=0.434 Sum_probs=127.2
Q ss_pred CccccccceeEEEEEeCCCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--------
Q 002581 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-------- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-------- 719 (905)
++||+|+||.||+|...+++.||+|++...... ..+.|.+|++++++++|+||+++++++......++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998754333 45679999999999999999999999999998999987
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK 160 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence 2
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
|+|||++.++.++.++|||||||+++||+| |+.|+....... ....+ ..+. .... +......+.
T Consensus 161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~~----~~~~-----~~~~---~~~~~~~~~ 225 (251)
T cd05041 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRERI----ESGY-----RMPA---PQLCPEEIY 225 (251)
T ss_pred cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHHH----hcCC-----CCCC---CccCCHHHH
Confidence 999999999999999999999999999999 788875432211 11111 1110 0011 112234577
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 800 GVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+++.+|++.+|.+|||+.||++.|+
T Consensus 226 ~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 226 RLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHhccChhhCcCHHHHHHHhh
Confidence 8899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-20 Score=198.88 Aligned_cols=165 Identities=26% Similarity=0.420 Sum_probs=127.7
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|.....||+|+||.||+|...++..||+|++.... ...+.|.+|++++++++|+|++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3466778899999999999998777789999986432 34567999999999999999999999875 455678877
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..++.++.++|||||||+++||+| |+.|+......+ ...+.. .+ ..+.. +...
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~----~~-----~~~~~---~~~~ 228 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVE----RG-----YRMPC---PQGC 228 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH----cC-----CCCCC---Cccc
Confidence 4999999999999999999999999999999 888886543221 112211 11 01111 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
...+.+++.+||+.+|.+||++++|++.|+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 229 PESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 344677888999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.3e-20 Score=201.10 Aligned_cols=175 Identities=23% Similarity=0.370 Sum_probs=129.6
Q ss_pred hcCCCCCCccccccceeEEEEEeC-----------------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcce
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-----------------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVR 703 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-----------------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~ 703 (905)
.++|...+.||+|+||.||++... ++..||||++.... ....++|.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356788899999999999998532 24579999997542 334568999999999999999999
Q ss_pred EEeEEEeCCeeEEEEc----------------------------------------------------------------
Q 002581 704 LYGCCIEGARRLLVYD---------------------------------------------------------------- 719 (905)
Q Consensus 704 l~g~~~~~~~~~lv~e---------------------------------------------------------------- 719 (905)
+++++...+..++|+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili 163 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence 9999998888888886
Q ss_pred ---------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh--CCCCCCCCCccchh
Q 002581 720 ---------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS--GRANSDNSLDTEKI 764 (905)
Q Consensus 720 ---------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt--g~~p~~~~~~~~~~ 764 (905)
.|+|||+...+.++.++|||||||++|||+| |..|+......+
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-- 241 (296)
T cd05095 164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-- 241 (296)
T ss_pred cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--
Confidence 3899999998999999999999999999999 667765432211
Q ss_pred hHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 765 YLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 765 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
....+........ .....+.. ..+...+.+++.+||+.||.+||+|.||++.|+
T Consensus 242 -~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 -VIENTGEFFRDQG-RQVYLPKP----ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred -HHHHHHHHHhhcc-ccccCCCC----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111111111110 01111111 122345778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-20 Score=202.61 Aligned_cols=165 Identities=23% Similarity=0.296 Sum_probs=125.3
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...++||+|+||+||++.. .+++.||||++.... ......+.+|++++++++|+|||++++++..++..++|+|
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 66678999999999999995 468999999996432 2223568899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR 161 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccc
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|||||++.+..++.++|||||||++|||++|+.||....... ..+.+....... ....+....
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~ 229 (285)
T cd05605 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKED---------QEEYSEKFS 229 (285)
T ss_pred cCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhhc---------ccccCcccC
Confidence 5999999999999999999999999999999999997533211 111111111111 011111222
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
..+.+++..|++.||.+|| ++.++++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 3467788999999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-20 Score=218.69 Aligned_cols=162 Identities=18% Similarity=0.254 Sum_probs=126.6
Q ss_pred CCCCCccccccceeEEEEEe-CC-CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
|...+.||+|+||.||+|.. .+ ++.||+|.+..........+.+|++++++++|||||+++++|...+..++|||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 66788999999999999984 34 67899998755444445668899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~ 228 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA 228 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccc
Confidence
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
+|||||++.+..++.++|||||||+++||+||+.|+...... .+ ...... +. .++. +.
T Consensus 229 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~---~~---~~~~~~-~~----~~~~----~~ 293 (478)
T PTZ00267 229 SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR---EI---MQQVLY-GK----YDPF----PC 293 (478)
T ss_pred cccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH---HH---HHHHHh-CC----CCCC----Cc
Confidence 499999999999999999999999999999999998743221 11 111111 11 1111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+.+++..|++.+|++||++.+++.
T Consensus 294 ~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 294 PVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 12234677888999999999999999874
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-20 Score=197.51 Aligned_cols=165 Identities=21% Similarity=0.432 Sum_probs=127.0
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccccCc------ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH------QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
+|...+.||+|+||+||+|...+|+.+|||.+..... ...+.+.+|++++++++|+||++++++|.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3667789999999999999988899999999864321 1235689999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 98
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||+..+..++.++|||||||+++||+||+.|+......+.. . ..... ....+.+
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~----~~~~~----~~~~~~~ 230 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM--F----YIGAH----RGLMPRL 230 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH--H----Hhhhc----cCCCCCC
Confidence 389999999999999999999999999999999998743221110 0 00000 0011222
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .....+..++.+|++.+|.+||++.||++
T Consensus 231 ~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 231 PD---SFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC---CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11 12234667888999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=215.51 Aligned_cols=255 Identities=26% Similarity=0.310 Sum_probs=200.6
Q ss_pred EEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEeccc
Q 002581 54 ITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN 133 (905)
Q Consensus 54 l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~ 133 (905)
-..|++..++++ .+|+.+. ++|+.|++++|+|+. +|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 456889999888 5787775 489999999999984 6653 589999999999999 46653 46899999999
Q ss_pred ccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCC
Q 002581 134 NNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIP 213 (905)
Q Consensus 134 N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p 213 (905)
|.++ .+|.. .++|+.|+|++|+++. +|.. +++|+.|++++|++++ +|... .+|+.|++++|++++ +|
T Consensus 272 N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLT-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchh-hhhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cc
Confidence 9998 56653 3578899999999884 5543 4689999999999985 55533 467889999999974 66
Q ss_pred ccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCC
Q 002581 214 SSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDS 293 (905)
Q Consensus 214 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~ 293 (905)
.. ..+|+.|+|++|.+...+. ...+|+.|++++|.++. +|.. ..+|+.|+|++|+|++ +|.. .++
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls~LP~----lp~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~ 403 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSE 403 (788)
T ss_pred cc---ccccceEecCCCccCCCCC----CCcccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccC
Confidence 42 2579999999998875332 23578899999999984 6653 3579999999999984 6654 368
Q ss_pred CCEEECcCCcCccCCCCCCCCCCCEEEeecCCCCCCCCcccc--cccc-cccccccceec
Q 002581 294 LNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFTFD 350 (905)
Q Consensus 294 L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~~~ 350 (905)
|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+. ..+. ++|++|+|++.
T Consensus 404 L~~LdLS~N~Lss-IP~l-~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 404 LKELMVSGNRLTS-LPML-PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred CCEEEccCCcCCC-CCcc-hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCch
Confidence 9999999999985 6653 457899999999998 6888765 5566 99999999864
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-20 Score=197.58 Aligned_cols=161 Identities=28% Similarity=0.479 Sum_probs=123.8
Q ss_pred CccccccceeEEEEEeC--C--CcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS--D--GRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~--~--g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+.. + +..||+|.+..... ...++|.+|+++++++.|+|||++++++. +...++|+|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999853 2 26899999975433 24567999999999999999999999876 445677776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR 159 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|+|||+..+..++.++|||||||++|||+| |+.|+..... ..+..++.. .... + .+....
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~----~~~~----~----~~~~~~ 224 (257)
T cd05060 160 WPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLES----GERL----P----RPEECP 224 (257)
T ss_pred ccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHc----CCcC----C----CCCCCC
Confidence 2999999999999999999999999999998 8999865432 222332221 1100 0 111123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
..+.+++.+|+..+|++||++.+|++.|++
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 457788999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-20 Score=197.69 Aligned_cols=166 Identities=22% Similarity=0.397 Sum_probs=130.1
Q ss_pred hcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.++|...+.||+|+||.||+|...++..||||.+... ....+.|.+|++++++++|+||+++.+++.+ ...++++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4567788999999999999999877888999998643 2345679999999999999999999999887 66778887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||++..+.++.++|||||||+++|++| |+.|+...... .+..+.. .+... +... .
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~----~~~~~----~~~~----~ 227 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALE----RGYRM----PRPE----N 227 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHh----CCCCC----CCcc----c
Confidence 3999999999999999999999999999999 88888643221 1222211 11100 1111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
....+.+++.+|++.+|++||++.++.+.|+
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 2234777888999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-20 Score=203.94 Aligned_cols=171 Identities=24% Similarity=0.380 Sum_probs=128.3
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCc--EEEEEEcccc-CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGR--VIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...+.||+|+||.||+|... ++. .+|+|++... .....++|.+|++++.++ +|+|||+++++|..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46777899999999999999964 454 4688887643 233456799999999999 899999999999887777777
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~ 166 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 166 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence 65
Q ss_pred ---------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcC
Q 002581 720 ---------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENN 777 (905)
Q Consensus 720 ---------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~ 777 (905)
.|+|||++.+..++.++|||||||+++||+| |..|+......+ ..+ ....+
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~ 239 (303)
T cd05088 167 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE----KLPQG 239 (303)
T ss_pred ccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---HHH----HHhcC
Confidence 3999999988889999999999999999998 999986432211 111 11111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 778 QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 778 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
..... +......+.+++.+||+.+|++||++.+++++|+...+
T Consensus 240 -----~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 240 -----YRLEK---PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred -----CcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00011 11122346778899999999999999999999985443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.3e-20 Score=208.75 Aligned_cols=109 Identities=17% Similarity=0.228 Sum_probs=97.5
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+|...+.||+|+||.||+|.. .+++.||||+.. .+.+.+|++++++++|||||++++++......++|+|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 5688889999999999999994 568999999753 2357899999999999999999999998888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 166 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 245 (391)
T PHA03212 166 KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAG 245 (391)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
+|+|||++.+..++.++|||||||++|||+||+.|+..
T Consensus 246 t~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 58999999999999999999999999999999988653
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.1e-20 Score=196.59 Aligned_cols=166 Identities=20% Similarity=0.329 Sum_probs=128.4
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-----cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-----HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++++++||||++++|++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788899999999999999985 468999999986432 1123568999999999999999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 987
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+......+ ...+ ..... ..+.+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~---~~~~~-----~~~~~-- 228 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA---AIFK---IATQP-----TNPQL-- 228 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH---HHHH---HhccC-----CCCCC--
Confidence 3999999999999999999999999999999999986432211 1111 11100 01111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+......+.+++..||+.+|.+|||+.|+++.
T Consensus 229 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 229 -PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11222346678889999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-20 Score=197.30 Aligned_cols=163 Identities=19% Similarity=0.355 Sum_probs=127.5
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||++.. .+++.+|||++.... ....+.|.+|++++++++|+||+++++++..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 366778999999999999985 468899999986432 3345679999999999999999999999998889999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..+..++.++|||||||++|||+||+.|++..... .... ..... ... .+. ...
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~---~~~~~-~~~-----~~~---~~~ 225 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALVL---KIMSG-TFA-----PIS---DRY 225 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHHH---HHHhc-CCC-----CCC---CCc
Confidence 599999999989999999999999999999999998653221 1111 11111 000 111 112
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++..||+.+|++||||.|+++
T Consensus 226 ~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 226 SPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 234677888999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-20 Score=205.31 Aligned_cols=163 Identities=16% Similarity=0.188 Sum_probs=125.7
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++.+....++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36778899999999999999964 68999999986432 223456899999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g 160 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG 160 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence 8
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|+|||++.+..++.++|||||||+++||+||+.|+......+ +. .... .+. ..+... ....
T Consensus 161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~---~~---~~i~-~~~------~~~~~~---~~~~ 224 (291)
T cd05612 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG---IY---EKIL-AGK------LEFPRH---LDLY 224 (291)
T ss_pred ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH---HHHH-hCC------cCCCcc---CCHH
Confidence 4999999999999999999999999999999999987543211 11 1111 111 111111 1223
Q ss_pred HHHHHHHhccCCCCCCCC-----HHHHHH
Q 002581 798 VIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPs-----m~ev~~ 821 (905)
+.+++.+|++.||.+||+ +.|+++
T Consensus 225 ~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 225 AKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 567888999999999995 666654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-20 Score=199.08 Aligned_cols=166 Identities=23% Similarity=0.414 Sum_probs=122.8
Q ss_pred CCCCCccccccceeEEEEEeCC-Cc--EEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC------e
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSD-GR--VIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------R 713 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~-g~--~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------~ 713 (905)
|+..++||+|+||.||+|+..+ ++ .||||.++.. .....+.|.+|++++++++|+||++++|+|.... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3457889999999999999754 33 6899998643 2334567999999999999999999999885421 2
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 355544
Q ss_pred ------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccc
Q 002581 720 ------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSL 780 (905)
Q Consensus 720 ------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 780 (905)
.|+|||+..+..++.++|||||||++|||++ |+.|+...... .+ ......+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~----~~~~~~~~~~ 233 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EI----YDYLRQGNRL 233 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HH----HHHHHcCCCC
Confidence 4899999999999999999999999999999 78887643221 11 1112221110
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 781 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
. . +......+.+++.+||+.+|++||||.++++.|+.
T Consensus 234 ~-----~---~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 234 K-----Q---PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred C-----C---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 0 1 11122346788899999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-20 Score=199.40 Aligned_cols=161 Identities=29% Similarity=0.532 Sum_probs=124.1
Q ss_pred CccccccceeEEEEEeCC-------CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 649 NKLGEGGYGPVYKGTLSD-------GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~-------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+.||+|+||.||+|+..+ ++.||||.+.... .....+|.+|++++++++|+|||+++|+|...+..++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 469999999999998642 2579999986432 2345679999999999999999999999988877788876
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence
Q ss_pred -----------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcccc
Q 002581 720 -----------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLG 781 (905)
Q Consensus 720 -----------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 781 (905)
.|+|||++.++.++.++|||||||++|||+| |+.|+...... .....+ ..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~----~~~~~-- 231 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHV----TAGGR-- 231 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHH----hcCCc--
Confidence 3899999999999999999999999999998 99988643221 111111 11110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 782 LVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 782 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+ ..+......+.+++.+||+.+|.+||+|.+|++.|+
T Consensus 232 -----~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 232 -----L-QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -----c-CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 011122345678888999999999999999999986
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-20 Score=200.25 Aligned_cols=166 Identities=22% Similarity=0.393 Sum_probs=130.5
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
.+|...+.||+|+||.||+|+. .+++.||||.+........+.+.+|+.+++.++|+||++++++|..++..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5677889999999999999994 5789999999976555556779999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~ 178 (297)
T cd06656 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 178 (297)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||+..+..++.++|||||||+++||+||+.||.......... .....+ .+.+ ..+......+
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~------~~~~-~~~~~~~~~~ 245 (297)
T cd06656 179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNG------TPEL-QNPERLSAVF 245 (297)
T ss_pred ccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCC------CCCC-CCccccCHHH
Confidence 4999999999999999999999999999999999986543211100 000000 0111 0111122335
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++.+||+.+|++||+|.+|++
T Consensus 246 ~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 246 RDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 67788999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-20 Score=198.81 Aligned_cols=163 Identities=20% Similarity=0.406 Sum_probs=127.8
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||++++++|......++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 3667789999999999999964 58899999986432 2345678899999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||+..+..++.++|||||||+++||+||+.|+.... ..+++...... .+++.....
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-----~~~~~~~~~--- 226 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQG-----YFAPISPNF--- 226 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhcc-----cCCCCCCCC---
Confidence 4999999999999999999999999999999999986432 22223222211 111111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+|++.+|++||||.||++
T Consensus 227 -~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 227 -SRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 234677788999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-20 Score=198.80 Aligned_cols=163 Identities=21% Similarity=0.440 Sum_probs=127.5
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
|...+.||+|+||.||+|.. .+++.||||++.... ....+.|.+|++++++++|+|||++++++..++..++|+|
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 55678899999999999985 468899999986432 2334679999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 165 (277)
T cd06641 86 GGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 165 (277)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
+|+|||+..+..++.++|||||||++|||+||+.|+...... .+.... .... .+.+. ......+.
T Consensus 166 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~-~~~~-----~~~~~---~~~~~~~~ 230 (277)
T cd06641 166 FWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFLI-PKNN-----PPTLE---GNYSKPLK 230 (277)
T ss_pred cccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHHH-hcCC-----CCCCC---cccCHHHH
Confidence 489999999999999999999999999999999998643221 111111 1111 11111 12233466
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 002581 800 GVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+++.+|++.+|.+||+|.++++.
T Consensus 231 ~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 231 EFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHccCChhhCcCHHHHHhC
Confidence 78889999999999999999983
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-20 Score=207.90 Aligned_cols=173 Identities=23% Similarity=0.383 Sum_probs=126.2
Q ss_pred hcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA- 712 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~- 712 (905)
.++|...++||+|+||.||+|... +++.||||+++... ....+.+.+|++++.++ +|+|||+++|+|...+
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 456788899999999999999732 24789999996432 22345688999999999 8999999999886432
Q ss_pred eeEEEE--------------------------------------------------------------------------
Q 002581 713 RRLLVY-------------------------------------------------------------------------- 718 (905)
Q Consensus 713 ~~~lv~-------------------------------------------------------------------------- 718 (905)
..++++
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 222211
Q ss_pred ---c----------------------------------------------------------------------CCCChh
Q 002581 719 ---D----------------------------------------------------------------------GYLAPE 725 (905)
Q Consensus 719 ---e----------------------------------------------------------------------gY~APE 725 (905)
. .|||||
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 0 399999
Q ss_pred hhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH
Q 002581 726 YAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALL 804 (905)
Q Consensus 726 ~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~ 804 (905)
++.+..++.|+|||||||+++||+| |+.|+......+ .+. .....+.. +.. +......+.+++.+
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~----~~~~~~~~-----~~~---~~~~~~~~~~l~~~ 311 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFC----RRLKEGTR-----MRA---PEYATPEIYSIMLD 311 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHH----HHHhccCC-----CCC---CccCCHHHHHHHHH
Confidence 9999999999999999999999998 999986533221 111 11111111 011 11123457888999
Q ss_pred hccCCCCCCCCHHHHHHHHhcCcc
Q 002581 805 CTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 805 C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
||+.+|++||++.||+++|+..++
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-20 Score=200.50 Aligned_cols=173 Identities=21% Similarity=0.325 Sum_probs=127.9
Q ss_pred CCCCCCccccccceeEEEEEe-----CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRL 715 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~ 715 (905)
.|...+.||+|+||.||++.. .++..||||.++... ....+.|.+|++++++++|+||+++.++|... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 456778999999999999984 357889999996443 33346799999999999999999999999875 4577
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 8887
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCc---------cchhhHHHHHHHHhhcCc
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLD---------TEKIYLLEWAWNLHENNQ 778 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~---------~~~~~l~~~~~~~~~~~~ 778 (905)
.|+|||+..+..++.++|||||||+++||+|++.|...... ........++. ....+.
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 243 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-VLEEGK 243 (284)
T ss_pred ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH-HHHcCc
Confidence 28999999989999999999999999999998876432110 00011111111 111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 779 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
.. .........+.+++..|++.+|.+|||+.+|++.|+.
T Consensus 244 ~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 244 RL--------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred cC--------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 00 0111233458889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=195.57 Aligned_cols=164 Identities=21% Similarity=0.350 Sum_probs=121.4
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-----cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--Cee
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-----HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARR 714 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~ 714 (905)
.+|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999985 468999999985331 12345689999999999999999999998753 566
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++++|
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 77876
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
+|+|||++.+..++.++|||||||++|||+||+.|+......+ .+..... ...++.+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~------~~~~~~~-----~~~~~~~ 230 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA------AIFKIAT-----QPTNPQL 230 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH------HHHHHhc-----CCCCCCC
Confidence 4899999999999999999999999999999999987432211 1111111 1112222
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+ .++.++.||..+|++||+|+||++
T Consensus 231 ~~~~~~----~~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 231 PSHISE----HARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred chhcCH----HHHHHHHHhcCChhhCcCHHHHhc
Confidence 211112 223334788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-20 Score=219.83 Aligned_cols=175 Identities=26% Similarity=0.436 Sum_probs=134.1
Q ss_pred HHHHhcCCCCCCccccccceeEEEEEeC----C----CcEEEEEEcccc-CcccHHHHHHHHHHHhhC-CCCCcceEEeE
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGTLS----D----GRVIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGC 707 (905)
Q Consensus 638 l~~~t~~f~~~~~iG~G~~g~Vy~g~~~----~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~ 707 (905)
++...+++...+.+|+|.||.|++|.+. . ...||||.++.. .....+.+..|+++|..+ +|+|||.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3344555555669999999999999843 1 357999999754 334567899999999999 69999999999
Q ss_pred EEeCCeeEEEEc--------------------------------------------------------------------
Q 002581 708 CIEGARRLLVYD-------------------------------------------------------------------- 719 (905)
Q Consensus 708 ~~~~~~~~lv~e-------------------------------------------------------------------- 719 (905)
|...+..++|.|
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 998777777665
Q ss_pred -----------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccch
Q 002581 720 -----------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEK 763 (905)
Q Consensus 720 -----------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~ 763 (905)
.|||||.+....||.|+|||||||+||||+| |..|+.+....+
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~- 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE- 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH-
Confidence 4999999999999999999999999999999 666665422122
Q ss_pred hhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 764 IYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 764 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
.+.+ ..++|... +.+..|..++..+|..||+.+|++||++.|.++.++..
T Consensus 530 -~l~~----~l~~G~r~--------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 530 -ELLE----FLKEGNRM--------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred -HHHH----HHhcCCCC--------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1222 33333221 22334556688999999999999999999999999863
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-20 Score=204.73 Aligned_cols=157 Identities=22% Similarity=0.246 Sum_probs=121.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
++||+|+||.||++.. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999995 468999999996432 2334568899999999999999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence 5
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIG 800 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 800 (905)
|||||++.++.++.++|||||||++|||+||+.|+......+ +.. .... + +..++. .....+.+
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~---~~~---~~~~-~------~~~~p~---~~~~~~~~ 224 (323)
T cd05595 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFE---LILM-E------EIRFPR---TLSPEAKS 224 (323)
T ss_pred cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---HHhc-C------CCCCCC---CCCHHHHH
Confidence 999999999999999999999999999999999987543211 111 1111 0 011111 11223566
Q ss_pred HHHHhccCCCCCCC-----CHHHHHH
Q 002581 801 VALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 801 l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
++..|++.||.+|| ++.++++
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 225 LLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 77899999999998 7888775
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=199.58 Aligned_cols=178 Identities=21% Similarity=0.307 Sum_probs=128.0
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.++|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++|||||++++++......++|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467888899999999999999964 689999999964432 234568899999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 163 (303)
T cd07869 84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNE 163 (303)
T ss_pred CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCC
Confidence
Q ss_pred ----CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC---ccc-----cccCCC
Q 002581 720 ----GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN---QSL-----GLVDPT 786 (905)
Q Consensus 720 ----gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~-----~~~d~~ 786 (905)
.|+|||.+.+ ..++.++||||+||+++||+||+.||....... ...+.+....... ... ...++.
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred cccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccchhhccccccc
Confidence 4999999875 468999999999999999999999997543211 1111111111100 000 000110
Q ss_pred -CCCCC----HH------HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 -LTEFN----DK------EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 -l~~~~----~~------~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..... .. ....+.+++..|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 00 1123567888999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.7e-20 Score=203.11 Aligned_cols=158 Identities=20% Similarity=0.204 Sum_probs=122.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
++||+|+||.||++.. .+|+.||||++... ......++.+|++++++++||||+++.+++...+..++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999995 56899999999643 22345678999999999999999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~ 160 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE 160 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence 5
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIG 800 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 800 (905)
|||||++.+..++.++|||||||++|||+||+.||......+ + ...... + +..++.. ....+.+
T Consensus 161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~---~---~~~~~~-~------~~~~p~~---~~~~~~~ 224 (328)
T cd05593 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---L---FELILM-E------DIKFPRT---LSADAKS 224 (328)
T ss_pred ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH---H---HHHhcc-C------CccCCCC---CCHHHHH
Confidence 999999999999999999999999999999999987532211 1 111111 0 1111111 1223566
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHH
Q 002581 801 VALLCTQASPMMRP-----PMSRVVAM 822 (905)
Q Consensus 801 l~~~C~~~~P~~RP-----sm~ev~~~ 822 (905)
++.+|++.||.+|| ++.|+++.
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 225 LLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 77899999999997 78888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.3e-20 Score=197.15 Aligned_cols=168 Identities=20% Similarity=0.387 Sum_probs=126.2
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
++|...+.||+|+||.||+|+. .+++.||||.++.........+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4566678899999999999985 4689999999875544445678899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 168 (267)
T cd06645 89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIG 168 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccC
Confidence
Q ss_pred --CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 --GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 --gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||++. .+.++.++|||||||++|||+||+.|+....+.... ..... .. ...+..... ...
T Consensus 169 ~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~~~~~-~~---~~~~~~~~~-~~~ 237 (267)
T cd06645 169 TPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------FLMTK-SN---FQPPKLKDK-MKW 237 (267)
T ss_pred cccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------Hhhhc-cC---CCCCccccc-CCC
Confidence 599999975 456899999999999999999999998643322111 01000 00 011111100 011
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+|++.+|++||++.+|++
T Consensus 238 ~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 238 SNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 123667888999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=195.82 Aligned_cols=162 Identities=22% Similarity=0.407 Sum_probs=124.7
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcc---------cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQ---------GKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~---------~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
|.....||+|+||.||+|.. .+++.||||.+...... ..+.|.+|++++++++|+||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 55678999999999999985 46889999988543211 124688999999999999999999999998888
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL 161 (267)
T ss_pred EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence 99887
Q ss_pred ---------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccC
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 ---------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+........ +.... ....
T Consensus 162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~------~~~~ 229 (267)
T cd06628 162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA------IFKIG------ENAS 229 (267)
T ss_pred cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH------HHHHh------ccCC
Confidence 38999999999999999999999999999999999875322110 11100 1112
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.+.. .....+..++.+||+.+|.+||++.||++
T Consensus 230 ~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PEIPS---NISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CcCCc---ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 22211 12234667778999999999999999886
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.3e-20 Score=198.17 Aligned_cols=162 Identities=22% Similarity=0.271 Sum_probs=121.4
Q ss_pred cccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||+||++.. .+|+.||+|++.... ....+.+..|++++++++||||+++.+++..+...++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999985 468999999996422 1223456789999999999999999999999999999998
Q ss_pred ------------------------------------------------------------------------------CC
Q 002581 720 ------------------------------------------------------------------------------GY 721 (905)
Q Consensus 720 ------------------------------------------------------------------------------gY 721 (905)
.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY 160 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence 69
Q ss_pred CChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHH
Q 002581 722 LAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGV 801 (905)
Q Consensus 722 ~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l 801 (905)
+|||++.+..++.++|||||||++|||+||+.|+...... ....+....... .. +....... ...+.++
T Consensus 161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~-~~----~~~~~~~~----~~~~~~l 229 (277)
T cd05607 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAKEELKRRTLE-DE----VKFEHQNF----TEESKDI 229 (277)
T ss_pred cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhHHHHHHHhhc-cc----cccccccC----CHHHHHH
Confidence 9999999999999999999999999999999998643221 111111111111 00 00000112 2236778
Q ss_pred HHHhccCCCCCCCCHHHHHHHH
Q 002581 802 ALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 802 ~~~C~~~~P~~RPsm~ev~~~L 823 (905)
+..|++.||.+||+++|+++.+
T Consensus 230 i~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 230 CRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHhccCHhhCCCCccchhhh
Confidence 8899999999999998877544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-20 Score=203.96 Aligned_cols=166 Identities=23% Similarity=0.424 Sum_probs=132.6
Q ss_pred cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
..|..-..||+|+.|.||.|. ..+++.||||++.......++-.++|+.+|+..+|+|||+++..+..+++.++|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 445566789999999999998 66789999999987766666678999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGT 432 (550)
T KOG0578|consen 353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGT 432 (550)
T ss_pred CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|||||+.....|..|+||||+|++++||+-|.+||....+-..+++ ....| .|.+.. ++.....+
T Consensus 433 PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL------Ia~ng------~P~lk~-~~klS~~~ 499 (550)
T KOG0578|consen 433 PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNG------TPKLKN-PEKLSPEL 499 (550)
T ss_pred CCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH------HhhcC------CCCcCC-ccccCHHH
Confidence 69999999999999999999999999999999999875433222221 11222 122211 11122235
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
-++..+|++.|+++||++.|+++
T Consensus 500 kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 500 KDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHHHhhcchhcCCCHHHHhc
Confidence 55667999999999999999986
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-19 Score=200.60 Aligned_cols=159 Identities=19% Similarity=0.282 Sum_probs=120.1
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|... +++.||||++... .....+.+.+|+.++.++ +|||||++++++...+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999954 6889999999743 223345688899998877 89999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 160 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccc--hhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTE--KIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|+|||++.+..++.++|||||||+++||+||+.||+...... ......|+......+.. .++ ......
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p---~~~~~~ 231 (329)
T cd05618 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RIP---RSLSVK 231 (329)
T ss_pred cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC------CCC---CCCCHH
Confidence 5999999999999999999999999999999999986321111 11223344333322211 111 112234
Q ss_pred HHHHHHHhccCCCCCCCCH
Q 002581 798 VIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm 816 (905)
+..++.+|++.||++||+.
T Consensus 232 ~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 232 AASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHhcCCHHHcCCC
Confidence 6678889999999999983
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-20 Score=200.66 Aligned_cols=178 Identities=21% Similarity=0.395 Sum_probs=129.9
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|+..+.||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5777889999999999999965 5889999998643 23345679999999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (288)
T cd07833 82 VERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDY 161 (288)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCc
Confidence
Q ss_pred ----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH--------hh-cCccc--ccc
Q 002581 720 ----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL--------HE-NNQSL--GLV 783 (905)
Q Consensus 720 ----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~--------~~-~~~~~--~~~ 783 (905)
.|+|||++.+. .++.++|||||||++|||+||+.|+......+......+.... +. ..... +..
T Consensus 162 ~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07833 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFP 241 (288)
T ss_pred ccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccC
Confidence 49999999988 8999999999999999999999998754322211111110000 00 00000 000
Q ss_pred CCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 784 DPTLT-----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 d~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.... .++......+.+++..||+.+|++||+|++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 242 EPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 011112456788999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-20 Score=200.13 Aligned_cols=159 Identities=23% Similarity=0.420 Sum_probs=119.8
Q ss_pred CccccccceeEEEEEeCC--------CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 649 NKLGEGGYGPVYKGTLSD--------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+.||+|+||.||+|.... ...||+|.+........++|.+|+.+++.++|+|||+++|++..++..++|+|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998532 23489999865544455789999999999999999999999999888999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~ 160 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP 160 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence
Q ss_pred --------CCCChhhhccC-CCCccCceEeechhhHHhHhCC-CCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 --------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGR-ANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 --------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||++.+. .++.++|||||||++|||++|+ .|+....... ... .... ...++.
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~~~----~~~~-------~~~~~~ 226 (258)
T cd05078 161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---KLQ----FYED-------RHQLPA 226 (258)
T ss_pred chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---HHH----HHHc-------cccCCC
Confidence 59999999874 5899999999999999999996 4443221111 010 1110 011111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.....+.+++..||+.+|++||||+++++.|.
T Consensus 227 ---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 227 ---PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11134678888999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.8e-20 Score=205.41 Aligned_cols=163 Identities=19% Similarity=0.242 Sum_probs=125.2
Q ss_pred cCCCCCCccccccceeEEEEEeCC--CcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD--GRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~--g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...+.||+|+||.||+|+..+ +..||||++... .....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 457778999999999999998543 368999998643 223356789999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~ 189 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC 189 (340)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence 98
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|||||++.+..++.++|||||||++|||+||+.||....... .......+.. .++.... .
T Consensus 190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------~~~~i~~~~~------~~p~~~~---~ 253 (340)
T PTZ00426 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-------IYQKILEGII------YFPKFLD---N 253 (340)
T ss_pred CChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-------HHHHHhcCCC------CCCCCCC---H
Confidence 5999999999999999999999999999999999997543211 1111111110 1111111 2
Q ss_pred HHHHHHHHhccCCCCCCC-----CHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
.+.+++.+|++.+|.+|+ +++|+++
T Consensus 254 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 254 NCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 245677899999999995 7887765
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.6e-20 Score=184.69 Aligned_cols=176 Identities=20% Similarity=0.319 Sum_probs=130.6
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.|...+++|+|.||.||+|+ ..+|+.||||+++.... .-....+||++.|+.++|+||+.|++++-..+...||+|
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 45567889999999999999 67899999999975432 224568999999999999999999999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V 162 (318)
T KOG0659|consen 83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQV 162 (318)
T ss_pred ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccce
Confidence
Q ss_pred ---CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC---ccc---cccC-----
Q 002581 720 ---GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN---QSL---GLVD----- 784 (905)
Q Consensus 720 ---gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~---~~~d----- 784 (905)
.|.|||.+.+. +|+...||||.|||+.||+-|.+-+.+..+-++.. .+...+... ... .+-|
T Consensus 163 ~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~---~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 163 VTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLS---KIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred eeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHH---HHHHHcCCCCcccCccccccccHHHHh
Confidence 69999998875 79999999999999999998887666544333322 222222111 100 0101
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 785 ----PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 785 ----~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+.+...-..+....++++...+..||.+|.|++|++++
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111112234456888889999999999999999874
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-19 Score=193.42 Aligned_cols=167 Identities=24% Similarity=0.397 Sum_probs=129.0
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||.|+||+||+|.. .++..||||++.... ....+.+.+|+++++.++|+||+++++.+..+...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4678889999999999999995 468899999986432 2345779999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence
Q ss_pred ----------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||++... .++.++|||||||++|||+||+.|+......+ .+.++. .. .++.+.
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~----~~------~~~~~~ 228 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTL----QN------DPPSLE 228 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHh----cC------CCCCcC
Confidence 38999999887 79999999999999999999999987543211 111111 11 011111
Q ss_pred CCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 789 EFN--DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 789 ~~~--~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
... ......+.+++..|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 110 122344677888999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.7e-20 Score=195.50 Aligned_cols=167 Identities=22% Similarity=0.410 Sum_probs=122.8
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC--eeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA--RRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~--~~~lv~e- 719 (905)
++...+.||+|+||+||.+... +|+..|||.+........+...+|+.+|++++|||||+.+|...... ..++.+|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 4566789999999999999964 49999999997653333567899999999999999999999744433 4666666
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~ 177 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDS 177 (313)
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccc
Confidence
Q ss_pred --------CCCChhhhccCCCC-ccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 --------GYLAPEYAMRGHLT-EKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 --------gY~APE~~~~~~~t-~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|||||++..+... .++||||+||+++||+||++|+... .....++....... .-|.+++.
T Consensus 178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~-----~~P~ip~~ 247 (313)
T KOG0198|consen 178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRED-----SLPEIPDS 247 (313)
T ss_pred cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccC-----CCCCCCcc
Confidence 49999999965433 5999999999999999999998743 11222222222211 11233332
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
-.++ ..++...|++.+|++|||+.+.+..-
T Consensus 248 ls~~---a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 248 LSDE---AKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred cCHH---HHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 2233 44556699999999999999998743
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-20 Score=202.18 Aligned_cols=179 Identities=25% Similarity=0.399 Sum_probs=127.6
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||.||+|... +++.||||++..... ...+.|.+|++++++++|+||++++++|..+...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35777899999999999999975 589999999864322 234678999999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY 160 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence
Q ss_pred ----CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchh-hHHHHHHHH-------hhcCcc-ccccCC
Q 002581 720 ----GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI-YLLEWAWNL-------HENNQS-LGLVDP 785 (905)
Q Consensus 720 ----gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~-~l~~~~~~~-------~~~~~~-~~~~d~ 785 (905)
.|+|||+..+ ..++.++|||||||++|||+||++|+......+.. .+..+.... ...... .....+
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07846 161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP 240 (286)
T ss_pred cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence 4899999875 45789999999999999999999888643321111 111110000 000000 000111
Q ss_pred CCCCC------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEF------NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~------~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..... .......+.+++.+||+.+|++||+|.+|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 11000 0112345778899999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-20 Score=197.81 Aligned_cols=168 Identities=23% Similarity=0.380 Sum_probs=127.7
Q ss_pred cCCCCCCccccccceeEEEEEeCC----CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
++|...+.||+|+||.||+|...+ ...||||...... ....+.|.+|+.++++++|+||++++++|.. ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 356778899999999999998643 2468999986543 3445689999999999999999999999875 446677
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 76
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||++....++.++|||||||+++|+++ |+.||......+ ...+. ..+.. ....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~----~~~~~-----~~~~-- 230 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---VIGRI----ENGER-----LPMP-- 230 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHH----HcCCc-----CCCC--
Confidence 3999999988899999999999999999996 999986543221 11221 11110 0111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
..+...+.+++.+|+..+|++|||+.++++.|+..
T Consensus 231 -~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 231 -PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred -CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 12233577788899999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-20 Score=202.61 Aligned_cols=179 Identities=18% Similarity=0.269 Sum_probs=128.0
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++|+||+++++++...+..++|+|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 45777889999999999999854 678999999964432 234568899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 165 (309)
T cd07872 86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165 (309)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence
Q ss_pred ---CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH--------HhhcC-ccccccCCC
Q 002581 720 ---GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN--------LHENN-QSLGLVDPT 786 (905)
Q Consensus 720 ---gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~--------~~~~~-~~~~~~d~~ 786 (905)
.|+|||++.+ ..++.++|||||||+++||+||+.||......+....+..... ..... .....-.+.
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07872 166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK 245 (309)
T ss_pred ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence 4999999865 5689999999999999999999999875543322221111100 00000 000000000
Q ss_pred CC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LT-----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .........+.+++.+|++.||.+|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 000011224567888999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-19 Score=202.19 Aligned_cols=157 Identities=22% Similarity=0.333 Sum_probs=120.8
Q ss_pred CccccccceeEEEEEe----CCCcEEEEEEccccC----cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 649 NKLGEGGYGPVYKGTL----SDGRVIAVKQLSIAS----HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+.||+|+||.||+++. .+++.||||++.... ......+.+|+++|++++|||||++++++..++..++|+|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357899999996431 2234568899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC 161 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
+|+|||++.+..++.++|||||||++|||+||+.||....... ....... +. ..++.. ...
T Consensus 162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~~~-~~------~~~~~~---~~~ 225 (323)
T cd05584 162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKILK-GK------LNLPPY---LTP 225 (323)
T ss_pred CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHHHc-CC------CCCCCC---CCH
Confidence 5999999999999999999999999999999999997543211 1111111 11 111111 122
Q ss_pred HHHHHHHHhccCCCCCCC-----CHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
.+.+++.+|++.+|++|| ++.++++
T Consensus 226 ~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 226 EARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 366788899999999999 6777665
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.6e-20 Score=194.77 Aligned_cols=163 Identities=26% Similarity=0.455 Sum_probs=125.9
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-----cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-----HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
|...+.||+|+||+||+|... +++.||+|.+.... ....+.|.+|++++++++|+||+++++++..+...++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566789999999999999965 78999999986432 123467999999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 161 (258)
T cd06632 82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF 161 (258)
T ss_pred EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccccccc
Confidence 8
Q ss_pred ----CCCChhhhccCC-CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ----GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ----gY~APE~~~~~~-~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||++.... ++.++|||||||+++||+||+.|+......+ ........... +.+. ...
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~~-----~~~~---~~~ 227 (258)
T cd06632 162 KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA------AVFKIGRSKEL-----PPIP---DHL 227 (258)
T ss_pred CCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH------HHHHHHhcccC-----CCcC---CCc
Confidence 489999998776 9999999999999999999999987543111 11111110111 1111 111
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+|++.+|.+||++.+++.
T Consensus 228 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 228 SDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 233566788999999999999999985
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.5e-20 Score=199.22 Aligned_cols=166 Identities=20% Similarity=0.353 Sum_probs=127.7
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+.|...+.||+|+||.||+|+.. +++.||+|++........++|.+|++++++++|+||+++++++......++|+|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45667788999999999999964 589999999976655566789999999999999999999999999899999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 171 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI 171 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceec
Confidence
Q ss_pred ---CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 ---GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 ---gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|+|||++. ...++.++|||||||++|||+||+.|+......+ ....... . ..+.+. .+
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~-----~~~~~~-~~ 238 (292)
T cd06644 172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAK-S-----EPPTLS-QP 238 (292)
T ss_pred CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhc-C-----CCccCC-CC
Confidence 499999985 3457889999999999999999999986432211 1111111 1 011110 01
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
......+.+++.+||+.+|++||++.||++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 112234677888999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-19 Score=194.44 Aligned_cols=165 Identities=20% Similarity=0.340 Sum_probs=128.7
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|+..++||+|+||.||.++ ..+++.||+|++... .....++|.+|++++++++|+||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 36677899999999999998 456899999998643 23445679999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..+..++.++||||||+++|||++|+.|++.....+ .+.... .+... + .....
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~-~~~~~----~----~~~~~ 225 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIV-QGNYT----P----VVSVY 225 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH-cCCCC----C----Ccccc
Confidence 5899999998889999999999999999999999987533211 111111 11111 1 11122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
...+.+++..||+.+|++||++.|+++.+
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 23467788899999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-20 Score=202.84 Aligned_cols=172 Identities=22% Similarity=0.378 Sum_probs=130.1
Q ss_pred hcCCCCCCccccccceeEEEEEeC--------CCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS--------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG 711 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~ 711 (905)
.++|...+.||+|+||.||+|... ++..||+|.+.... .....++.+|++++.++ +|+||++++++|...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 356788899999999999999742 23579999997432 23456789999999999 899999999999888
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
+..++|+|
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence 87777775
Q ss_pred ------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHH
Q 002581 720 ------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLE 768 (905)
Q Consensus 720 ------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~ 768 (905)
.|||||++.+..++.++|||||||++|||+| |+.|+......+ +
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~---~-- 251 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L-- 251 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---H--
Confidence 3999999999999999999999999999999 788875432111 1
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 769 WAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 769 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
. .....+... +.+......+.+++..|++.+|.+||+|.+|++.|+..+.
T Consensus 252 -~-~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 252 -F-KLLKEGHRM--------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred -H-HHHHcCCCC--------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 1 111111110 1111223456778889999999999999999999986443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.8e-20 Score=202.86 Aligned_cols=172 Identities=22% Similarity=0.353 Sum_probs=130.4
Q ss_pred hcCCCCCCccccccceeEEEEEe--------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL--------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG 711 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~--------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~ 711 (905)
.++|...+.||+|+||.||+|+. .++..||||.+.... ....+++.+|+.++..+ +|+||++++++|...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45677789999999999999973 134579999986432 33456799999999999 899999999999888
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 77777776
Q ss_pred ------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHH
Q 002581 720 ------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLE 768 (905)
Q Consensus 720 ------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~ 768 (905)
.|+|||++.+..++.++|||||||++|||+| |..|+..... .+
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~ 247 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EE 247 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HH
Confidence 3999999999999999999999999999999 7777754321 11
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 769 WAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 769 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
+... ...+... . .+..+...+.+++.+||+.+|.+||||.||++.|++...
T Consensus 248 ~~~~-~~~~~~~-----~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 248 LFKL-LKEGHRM-----D---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHH-HHcCCcC-----C---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1111 1111110 0 111223457778889999999999999999999986443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-19 Score=200.85 Aligned_cols=111 Identities=19% Similarity=0.323 Sum_probs=95.4
Q ss_pred CCccccc--cceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 648 SNKLGEG--GYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 648 ~~~iG~G--~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
.++||+| +||+||++.. .+|+.||||+++... ....+.+.+|+++++.++|||||+++++|...+..++|+|
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 7899999985 578999999996542 2233557789999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 162 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVH 162 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccc
Confidence
Q ss_pred ----------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ----------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ----------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 163 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred cccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 2899999976 46899999999999999999999999753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.1e-20 Score=198.24 Aligned_cols=164 Identities=21% Similarity=0.346 Sum_probs=124.5
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
|...+.||+|+||.||+|... ++..+|+|.+........+.|.+|++++++++|+||++++++|..+...++|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 344677999999999999965 578899999975555556789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 166 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT 166 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccccc
Confidence
Q ss_pred -CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||++. +..++.++|||||||++|||++|+.|+......+ ... ..... .......+ ..
T Consensus 167 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~----~~~~~-~~~~~~~~------~~ 233 (282)
T cd06643 167 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLL----KIAKS-EPPTLAQP------SR 233 (282)
T ss_pred ccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHH----HHhhc-CCCCCCCc------cc
Confidence 499999984 4567889999999999999999999986433211 111 11110 00011111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+.+++..||+.+|.+||++.++++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1234667888999999999999999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=200.23 Aligned_cols=159 Identities=19% Similarity=0.261 Sum_probs=120.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+. .+++.||||+++... ....+.+.+|..++.++ +|||||++++++......++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999995 468999999997432 22345688999999998 79999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP 160 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccc--hhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTE--KIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|||||++.+..++.++|||||||++|||+||+.||+.....+ .....+|.......+.. .++.. ....
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~---~~~~ 231 (329)
T cd05588 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------RIPRS---LSVK 231 (329)
T ss_pred cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------CCCCC---CCHH
Confidence 4999999999999999999999999999999999997422111 11223344333322211 11111 1223
Q ss_pred HHHHHHHhccCCCCCCCCH
Q 002581 798 VIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm 816 (905)
+.+++..|++.||.+||++
T Consensus 232 ~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 232 ASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHhccCHHHcCCC
Confidence 6677889999999999983
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-19 Score=194.79 Aligned_cols=165 Identities=24% Similarity=0.357 Sum_probs=127.5
Q ss_pred cCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE-GARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~~~~lv~e-- 719 (905)
++|...+.||+|+||.||+|... |+.||+|.++.. ...+.|.+|+.++++++|+|+++++|++.. +...++|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 35777899999999999999875 788999998643 235679999999999999999999998754 456788887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 162 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 162 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccc
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
+|+|||++.+..++.++|||||||+++||+| |+.|+..... ..+..++. .+. .+.. ...+...
T Consensus 163 ~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~----~~~-----~~~~---~~~~~~~ 227 (256)
T cd05082 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVE----KGY-----KMDA---PDGCPPV 227 (256)
T ss_pred eeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHh----cCC-----CCCC---CCCCCHH
Confidence 4999999999999999999999999999998 8888763321 11222221 111 1111 1122345
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
+.+++.+|++.+|++||||.++++.|+.
T Consensus 228 ~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 228 VYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 7778889999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-19 Score=199.59 Aligned_cols=157 Identities=18% Similarity=0.270 Sum_probs=121.4
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|... +++.||||++.... ....+.+.+|.+++..+ +||||+++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57899999997432 23345688999999888 79999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~ 160 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP 160 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||...... .+.. . ..... ..+.. .....+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~~---~-i~~~~------~~~~~---~~~~~~~ 224 (318)
T cd05570 161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELFQ---S-ILEDE------VRYPR---WLSKEAK 224 (318)
T ss_pred cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHHH---H-HHcCC------CCCCC---cCCHHHH
Confidence 599999999999999999999999999999999999754321 1111 1 11111 11111 1123466
Q ss_pred HHHHHhccCCCCCCCCH-----HHHHH
Q 002581 800 GVALLCTQASPMMRPPM-----SRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm-----~ev~~ 821 (905)
+++.+|++.||.+||++ .++++
T Consensus 225 ~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 225 SILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 78889999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-19 Score=197.55 Aligned_cols=167 Identities=24% Similarity=0.379 Sum_probs=128.5
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.++|...+.||+|+||.||+|... +++.||+|.+........+.|.+|++++++++|+||+++++++..+...++|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456777888999999999999964 689999999976555556789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTF 163 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccccee
Confidence
Q ss_pred ----CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 ----GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ----gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||++. +..++.++|||||||++|||+||+.|+......+ .+. .. ..+. .+.+. .
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~----~~-~~~~-----~~~~~-~ 230 (280)
T cd06611 164 IGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLL----KI-LKSE-----PPTLD-Q 230 (280)
T ss_pred ecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHH----HH-hcCC-----CCCcC-C
Confidence 499999975 3457889999999999999999999987542211 111 11 1111 11110 0
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+......+.+++..||+.+|.+||++.+|++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1111234667788999999999999999986
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-21 Score=222.03 Aligned_cols=286 Identities=28% Similarity=0.402 Sum_probs=168.8
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
+++.|++++|.+. ..|..+..+.+|+.|+++.|.|. ..|...+++.+|++|+|..|.+. .+|.++..+++|++||++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4788888876654 56777888888888888888886 56778888888888888887776 678888888888888888
Q ss_pred cccCCCCCCccccCC-----------------------------------------------------------------
Q 002581 133 NNNFSGALPPEIGNL----------------------------------------------------------------- 147 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L----------------------------------------------------------------- 147 (905)
+|++. .+|..+..+
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l 201 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANL 201 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccch
Confidence 88765 333211111
Q ss_pred ---------------------------------------CCccEEEecccCCCCCCchhhhccCccceecccCccccCCC
Q 002581 148 ---------------------------------------AKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188 (905)
Q Consensus 148 ---------------------------------------~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~i 188 (905)
.+|++++++.|++++ +|++++.+.+|+.|++.+|+++ .+
T Consensus 202 ~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~l 279 (1081)
T KOG0618|consen 202 EVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-AL 279 (1081)
T ss_pred hhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hh
Confidence 122223333333332 3344444444444444444442 22
Q ss_pred CCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccC-----------------------------------
Q 002581 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFV----------------------------------- 233 (905)
Q Consensus 189 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~----------------------------------- 233 (905)
|..+...++|+.|.+..|.++ -+|.....++.|++|+|..|++.
T Consensus 280 p~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~ 358 (1081)
T KOG0618|consen 280 PLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNH 358 (1081)
T ss_pred HHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhh
Confidence 222222222222222222222 24444555566666666555433
Q ss_pred --------------CCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEEC
Q 002581 234 --------------SSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFL 299 (905)
Q Consensus 234 --------------~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L 299 (905)
....+.+.++.+|+.|+|++|++.......+.+++.|+.|+||+|+++ .+|..+.++..|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 222333445556666666666654222224455666666666666665 56666666666666666
Q ss_pred cCCcCccCCCCC-CCCCCCEEEeecCCCCC-CCCcccc-cccc-cccccccc
Q 002581 300 GNNSLSGTLPTQ-KSENLQNIDLSYNHLSG-PFPSWVT-SSLQ-MNLAVNNF 347 (905)
Q Consensus 300 s~N~l~g~~p~~-~~~~L~~L~Ls~N~lsg-~ip~~~~-~~l~-l~l~~N~~ 347 (905)
.+|++. .+|.. ..+.|+.+|||.|+|+. .+|.... .+|+ ||+++|..
T Consensus 438 hsN~l~-~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 438 HSNQLL-SFPELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCCcee-echhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 666666 44532 24789999999999874 4555555 6777 89988874
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.8e-20 Score=199.75 Aligned_cols=161 Identities=19% Similarity=0.322 Sum_probs=125.5
Q ss_pred CCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 648 SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
...||+|+||.||+|.. .+++.||||++........+.+.+|+.++.+++||||+++++++..++..++|+|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 45799999999999985 4689999999975555556779999999999999999999999999999999998
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
+|+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~a 185 (297)
T cd06659 106 TDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMA 185 (297)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccC
Confidence 4999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVAL 803 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~ 803 (905)
||++.+..++.++|||||||+++||+||+.|+......+ ....+ ...... ........ ...+.+++.
T Consensus 186 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~~~~----~~~~~~--~~~~~~~~----~~~l~~~i~ 252 (297)
T cd06659 186 PEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ---AMKRL----RDSPPP--KLKNAHKI----SPVLRDFLE 252 (297)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH----hccCCC--CccccCCC----CHHHHHHHH
Confidence 999999999999999999999999999999987433221 11111 110000 00000111 223566788
Q ss_pred HhccCCCCCCCCHHHHHH
Q 002581 804 LCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 804 ~C~~~~P~~RPsm~ev~~ 821 (905)
.|++.+|.+||++.+|++
T Consensus 253 ~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 253 RMLTREPQERATAQELLD 270 (297)
T ss_pred HHhcCCcccCcCHHHHhh
Confidence 999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=7e-20 Score=199.22 Aligned_cols=176 Identities=21% Similarity=0.311 Sum_probs=125.2
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|+. .+|+.||||++.... ....+.|.+|++++++++|+||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 477788999999999999985 468999999986432 2234579999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (284)
T cd07860 81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 160 (284)
T ss_pred cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence
Q ss_pred ----CCCChhhhccCC-CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc-C--------------cc
Q 002581 720 ----GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN-N--------------QS 779 (905)
Q Consensus 720 ----gY~APE~~~~~~-~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~-~--------------~~ 779 (905)
.|+|||+..+.. ++.++|||||||+++||+||+.|+......+ .+.+.....-.. . ..
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 499999887654 6899999999999999999999986433211 111111100000 0 00
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.......+..........+.+++.+|++.||++||||+|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000011123567888999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-20 Score=198.25 Aligned_cols=176 Identities=23% Similarity=0.371 Sum_probs=131.2
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
+.++++..++++|...+.||+|+||.||+|.. .+++.+|||++... .....++.+|+.++.++ +|+||++++++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45677778899999999999999999999985 46889999998642 22345688999999999 69999999999853
Q ss_pred -----CCeeEEEEc------------------------------------------------------------------
Q 002581 711 -----GARRLLVYD------------------------------------------------------------------ 719 (905)
Q Consensus 711 -----~~~~~lv~e------------------------------------------------------------------ 719 (905)
++..++|||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 346788887
Q ss_pred ----------------------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH
Q 002581 720 ----------------------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 ----------------------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.|+|||++.. ..++.++|||||||++|||+||+.|+........ +..
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~~---- 240 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LFK---- 240 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hhh----
Confidence 4999999753 4588999999999999999999999875432111 110
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
..........++.. ....+..++.+|++.+|++|||+.||++.
T Consensus 241 -~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 -IPRNPPPTLHQPEL------WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -ccccCCCcccCCCC------cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00010011111111 12246778889999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.8e-21 Score=203.92 Aligned_cols=179 Identities=18% Similarity=0.324 Sum_probs=131.3
Q ss_pred cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHH--HHHHHHHHhhCC-CCCcceEEeEEEeCC-eeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ--FVNEIATISAVQ-HRNLVRLYGCCIEGA-RRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~--f~~E~~~l~~~~-H~niv~l~g~~~~~~-~~~lv 717 (905)
++|...+.||.|.||.||+|+ ..+|..||||+++..-.. .++ =+||++.|+++. |||||+|..++.+.+ ..++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 445567889999999999999 567999999999754332 333 468999999998 999999999999988 88999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe 168 (538)
T KOG0661|consen 89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE 168 (538)
T ss_pred HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcch
Confidence 98
Q ss_pred -----CCCChhhhc-cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc---------cccccC
Q 002581 720 -----GYLAPEYAM-RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ---------SLGLVD 784 (905)
Q Consensus 720 -----gY~APE~~~-~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~d 784 (905)
.|.|||++. .+-|+.+.|+|++|||++|+.+-|+-|.+....++++-+..|.....+.. .+.+--
T Consensus 169 YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~ 248 (538)
T KOG0661|consen 169 YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRF 248 (538)
T ss_pred hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCC
Confidence 699999875 57899999999999999999999988876544333322211111100000 000101
Q ss_pred CCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 785 PTL-----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 785 ~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
|.. ......+..++++++..|++.||.+|||+.|.+++
T Consensus 249 P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 249 PQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111 11122355667888889999999999999999974
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-20 Score=186.03 Aligned_cols=170 Identities=21% Similarity=0.316 Sum_probs=134.1
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----eeE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RRL 715 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~~ 715 (905)
.++|...+.+|+|||..||.++ +.+++.+|+|++.....++.+..++|++.-++++||||+++++++..+. +.+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3567788999999999999999 7889999999998777677888999999999999999999999886543 367
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
|+++
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 7765
Q ss_pred -----------------------CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH
Q 002581 720 -----------------------GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773 (905)
Q Consensus 720 -----------------------gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~ 773 (905)
-|.|||.+. +..+++|+|||||||+||+|+-|..||+.....+ .++
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G-gSl------- 251 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG-GSL------- 251 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC-CeE-------
Confidence 599999886 4578999999999999999999999998544311 111
Q ss_pred hhcCccccccCCCC--CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 774 HENNQSLGLVDPTL--TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 774 ~~~~~~~~~~d~~l--~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
...+..+.+ +... .-...+.+++.+|++.||.+||+..+++..++.
T Consensus 252 -----aLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 252 -----ALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred -----EEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 112233333 1111 133457788889999999999999999998874
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=200.27 Aligned_cols=156 Identities=20% Similarity=0.292 Sum_probs=117.2
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHH---hhCCCCCcceEEeEEEeCCeeEEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATI---SAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l---~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ ++++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 44567899999999999985 468999999996432 22345577776654 577899999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTST 160 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccc
Confidence 98
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|||||++.+..++.++|||||||++|||+||+.|+......+ + ...... +. +.... ..
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~---~---~~~i~~-~~------~~~p~---~~ 224 (324)
T cd05589 161 FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE---V---FDSIVN-DE------VRYPR---FL 224 (324)
T ss_pred cccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHh-CC------CCCCC---CC
Confidence 5999999999999999999999999999999999987543211 1 111111 11 11111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCH
Q 002581 795 ALRVIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm 816 (905)
...+.+++.+|++.||.+||++
T Consensus 225 ~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 225 SREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred CHHHHHHHHHHhhcCHhHcCCC
Confidence 2335678889999999999954
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.4e-20 Score=216.10 Aligned_cols=170 Identities=26% Similarity=0.319 Sum_probs=128.1
Q ss_pred HHHHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC--
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-- 712 (905)
Q Consensus 638 l~~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-- 712 (905)
.....++|...++||+|+||+||+|+ ..+|+.||||++... .......+.+|+..+..++|+|+|++...+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 34456788899999999999999998 457999999998643 2334567899999999999999999887765432
Q ss_pred ------eeEEEEc-------------------------------------------------------------------
Q 002581 713 ------RRLLVYD------------------------------------------------------------------- 719 (905)
Q Consensus 713 ------~~~lv~e------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 2456766
Q ss_pred -----------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc
Q 002581 720 -----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN 776 (905)
Q Consensus 720 -----------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~ 776 (905)
+|||||++.+..++.|+|||||||++|||+||+.||..... .+.+.....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~~~~~- 259 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMHKTLA- 259 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc-
Confidence 49999999999999999999999999999999999974321 122222111
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+. .++ + +......+.+++..||+.+|.+||++.++++.
T Consensus 260 ~~----~~~-~---~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GR----YDP-L---PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC----CCC-C---CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11 111 1 11122346778889999999999999999863
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=198.59 Aligned_cols=166 Identities=23% Similarity=0.412 Sum_probs=126.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++|+|+|+++++|.+....++|+|
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 55678899999999999995 468999999986432 2234578999999999999999999999999999999997
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 186 (317)
T cd06635 107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPY 186 (317)
T ss_pred CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCcc
Confidence 5
Q ss_pred CCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 721 YLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 721 Y~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
|+|||++. .+.++.++|||||||++|||+||+.|+....... .+..+ ...+. +... .......
T Consensus 187 y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~----~~~~~------~~~~--~~~~~~~ 252 (317)
T cd06635 187 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHI----AQNES------PTLQ--SNEWSDY 252 (317)
T ss_pred ccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--HHHHH----HhccC------CCCC--CccccHH
Confidence 99999984 4678999999999999999999999986432111 11111 11110 1110 1112234
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+.+++.+|++.+|.+||++.+|++.+.
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhChh
Confidence 677888999999999999999998654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-20 Score=202.77 Aligned_cols=154 Identities=23% Similarity=0.317 Sum_probs=118.7
Q ss_pred CccccccceeEEEEEe----CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 649 NKLGEGGYGPVYKGTL----SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~----~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
+.||+|+||.||++.. .+|+.||||++.... ......+.+|++++++++|||||++++++...+..++|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 358899999996432 2234568899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~ 161 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT 161 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|||||++.+..++.++|||||||++|||+||+.|+......+ ... .... .. ..++.. ....+
T Consensus 162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~---~i~~-~~------~~~p~~---~~~~~ 225 (318)
T cd05582 162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE---TMT---MILK-AK------LGMPQF---LSPEA 225 (318)
T ss_pred hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH---HHH---HHHc-CC------CCCCCC---CCHHH
Confidence 5999999999899999999999999999999999987543211 111 1111 11 011111 12235
Q ss_pred HHHHHHhccCCCCCCCCHHH
Q 002581 799 IGVALLCTQASPMMRPPMSR 818 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~e 818 (905)
.+++..|++.||++||++.+
T Consensus 226 ~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 226 QSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHhhcCHhHcCCCCC
Confidence 66778999999999999665
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=197.18 Aligned_cols=167 Identities=23% Similarity=0.397 Sum_probs=130.1
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
++|...+.||+|+||.||+|.. .+++.||+|.+........+.|.+|+.++++++||||++++++|...+..++|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5677788999999999999984 4688999999875544456779999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 178 (293)
T cd06647 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 178 (293)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||+...+.++.++|||||||++||++||+.||......+... .....+. +... ........+
T Consensus 179 ~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~------~~~~-~~~~~~~~l 245 (293)
T cd06647 179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT------PELQ-NPEKLSAIF 245 (293)
T ss_pred hhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC------CCCC-CccccCHHH
Confidence 3999999998899999999999999999999999997543221110 0000000 0111 111122346
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.+++..||+.+|.+||++.+++..
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 678889999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=222.51 Aligned_cols=270 Identities=24% Similarity=0.269 Sum_probs=219.6
Q ss_pred CccccCCCCCCEEECCCCC------CCCCCchhhcCCc-cccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCC
Q 002581 69 PEELVTLQYLTFLKIDRNF------FTGPLPSFIGNLS-RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALP 141 (905)
Q Consensus 69 p~~l~~l~~L~~L~Ls~N~------l~~~~p~~~~~L~-~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP 141 (905)
+..|..+++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| ...+|+.|+|.+|++. .+|
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 4568899999999997664 3345777777775 6999999999887 778877 5789999999999987 688
Q ss_pred ccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCC
Q 002581 142 PEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLAS 221 (905)
Q Consensus 142 ~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~ 221 (905)
..+..+++|+.|+|++|...+.+|. ++.+++|+.|++++|.....+|..++++++|+.|++++|...+.+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 8999999999999999887778874 8899999999999998888999999999999999999987667888766 7999
Q ss_pred CCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCccc------------------------------CCCCCCC
Q 002581 222 LESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI------------------------------GELQNLQ 271 (905)
Q Consensus 222 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~------------------------------~~l~~L~ 271 (905)
|+.|++++|......+. ...+|++|+|++|.+. .+|..+ ...++|+
T Consensus 706 L~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~ 781 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPD---ISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT 781 (1153)
T ss_pred CCEEeCCCCCCcccccc---ccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccch
Confidence 99999999865433222 2457888888888865 344322 1235788
Q ss_pred EEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCC-CCCCCEEEeecCCCCCCCCcccccccc-cccccccce
Q 002581 272 TLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK-SENLQNIDLSYNHLSGPFPSWVTSSLQ-MNLAVNNFT 348 (905)
Q Consensus 272 ~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~-~~~L~~L~Ls~N~lsg~ip~~~~~~l~-l~l~~N~~~ 348 (905)
.|+|++|...+.+|.+++++++|+.|+|++|...+.+|... .++|+.|+|++|.....+|... .+++ |+|+.|.++
T Consensus 782 ~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~~-~nL~~L~Ls~n~i~ 859 (1153)
T PLN03210 782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDIS-TNISDLNLSRTGIE 859 (1153)
T ss_pred heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccccccc-cccCEeECCCCCCc
Confidence 89999998888899999999999999999986666777654 5789999999987766777543 4555 889888876
|
syringae 6; Provisional |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=196.88 Aligned_cols=176 Identities=21% Similarity=0.333 Sum_probs=125.0
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+++|+||+++++++..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 3666788999999999999964 68999999986432 2234678999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH 160 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence
Q ss_pred -----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh--cC-------------c
Q 002581 720 -----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE--NN-------------Q 778 (905)
Q Consensus 720 -----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~--~~-------------~ 778 (905)
.|+|||++.+. .++.++|||||||+++||+||+.|+......+. +......... +. .
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 48999988754 579999999999999999999999875432111 1110000000 00 0
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 779 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+..+.........++.+++.+|++.||.+|||+.+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000011234567888999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.4e-19 Score=193.51 Aligned_cols=173 Identities=22% Similarity=0.298 Sum_probs=128.7
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv~ 718 (905)
++|...+.||.|++|.||+|... +++.||+|.+..... ...++|.+|++++++++|+|||+++++|... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777889999999999999964 588999999864322 3456799999999999999999999998653 3578888
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 7
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCc--cchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLD--TEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|+|||+..+..++.++||||+||++|||+||+.|++.... .....+..|+... ..... +.... .
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~-~ 234 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----PNPEL-KDEPG-N 234 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----Cchhh-ccCCC-C
Confidence 59999999999999999999999999999999999875422 1112233332211 00011 10110 0
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.......+.+++.+||+.+|++||||.||++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0012234678889999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-19 Score=192.26 Aligned_cols=167 Identities=22% Similarity=0.363 Sum_probs=123.5
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc---c-------cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---Q-------GKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~-------~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
|...+.||+|+||.||+|.. .+|+.||||.++.... . ..+.|.+|++++++++|+|+++++|+|...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 55678999999999999984 4689999998853211 0 12468899999999999999999999999999
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 162 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY 162 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc
Confidence 999988
Q ss_pred ------------CCCChhhhccCC--CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 ------------GYLAPEYAMRGH--LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 ------------gY~APE~~~~~~--~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|+|||+..... ++.++|||||||++||+++|+.|+......+ ........ .....+++
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~-~~~~~~~~ 235 (272)
T cd06629 163 DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA------AMFKLGNK-RSAPPIPP 235 (272)
T ss_pred cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH------HHHHhhcc-ccCCcCCc
Confidence 489999988754 8999999999999999999999986332111 11111111 11111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .......+.+++..|++.+|++||+|.||++
T Consensus 236 ~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 236 DV---SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cc---cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11 1112334677888999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-20 Score=208.85 Aligned_cols=78 Identities=26% Similarity=0.462 Sum_probs=60.8
Q ss_pred HhcCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccC-cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGA 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~ 712 (905)
..++|...+.||+|+||.||+|.+. .++.||||+++... ....+.|.+|+++|.++. |||||+++|+|...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 4456777899999999999999853 24689999997542 223457999999999997 999999999987765
Q ss_pred eeEEEE
Q 002581 713 RRLLVY 718 (905)
Q Consensus 713 ~~~lv~ 718 (905)
..++|+
T Consensus 115 ~~~iv~ 120 (401)
T cd05107 115 PIYIIT 120 (401)
T ss_pred CcEEEE
Confidence 544444
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=198.87 Aligned_cols=176 Identities=18% Similarity=0.302 Sum_probs=127.1
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++......++|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 45777889999999999999854 68899999986433 2234568899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (301)
T cd07873 86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV 165 (301)
T ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence
Q ss_pred ---CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---Ccccccc------CCC
Q 002581 720 ---GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQSLGLV------DPT 786 (905)
Q Consensus 720 ---gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~------d~~ 786 (905)
.|+|||.+.+. .++.++|||||||++|||+||+.||......+. ...+...... .....++ ...
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T cd07873 166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEFKSYN 242 (301)
T ss_pred eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCChhhchhhhccccccccc
Confidence 49999998754 588999999999999999999999875433221 1111111100 0000000 000
Q ss_pred CCCC--------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LTEF--------NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~--------~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... .......+.+++.+|++.||.+|||+.||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1000 0011224567889999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=197.26 Aligned_cols=166 Identities=22% Similarity=0.374 Sum_probs=126.2
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|...+.||+|+||.||++... +|+.||+|.+... .....++|.+|++++.+++|+||+++++++...+..++|+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5667789999999999999965 6899999998643 22335679999999999999999999999999889999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN 161 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence
Q ss_pred ----CCCChhhhccCC------CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 ----GYLAPEYAMRGH------LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----gY~APE~~~~~~------~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
+|+|||++.+.. ++.++|||||||++|||+||+.|+....... ...-.. .+.+.....
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~---------~~~~~~~~~ 229 (286)
T cd06622 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQLS---------AIVDGDPPT 229 (286)
T ss_pred CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHHH---------HHhhcCCCC
Confidence 599999986543 5889999999999999999999986432211 111000 011111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+......+..++.+|++.+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 230 LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 22223344667888999999999999999886
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=201.83 Aligned_cols=181 Identities=20% Similarity=0.244 Sum_probs=127.8
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA----- 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~----- 712 (905)
..++|...+.||+|+||.||+|.. .+|+.||||++... ......++.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 346788889999999999999985 46899999999643 2234567889999999999999999999986543
Q ss_pred -eeEEEEc------------------------------------------------------------------------
Q 002581 713 -RRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 713 -~~~lv~e------------------------------------------------------------------------ 719 (905)
..++|+|
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 178 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM 178 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence 4688887
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh------------H----HHHHHHHhh
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY------------L----LEWAWNLHE 775 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~------------l----~~~~~~~~~ 775 (905)
.|+|||.+.+..++.++|||||||++|||+||+.||......+... + ...+.....
T Consensus 179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (359)
T cd07876 179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE 258 (359)
T ss_pred CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 4999999999999999999999999999999999997543211000 0 000111111
Q ss_pred cCcc------ccccC----CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 NNQS------LGLVD----PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 ~~~~------~~~~d----~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... .+... +............+.+++.+|++.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 00000 0000001111234677888999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=192.35 Aligned_cols=161 Identities=32% Similarity=0.517 Sum_probs=125.5
Q ss_pred CccccccceeEEEEEeCC----CcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLSD----GRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+.||+|+||.||+|...+ +..||||.+...... ..+.+.+|++.+.+++|+||+++++++......++|+|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999653 788999999754333 36789999999999999999999999998877788776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence
Q ss_pred -----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||.+....++.++||||+||+++||+| |+.|+...... .+.+.+ ..+. ...
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~----~~~~-----~~~- 227 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVLEYL----RKGY-----RLP- 227 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----HcCC-----CCC-
Confidence 4999999999899999999999999999999 58888754221 122111 1111 011
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+......+.+++..|++.+|++|||+.|+++.|+
T Consensus 228 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 --KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11122345778888999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-19 Score=196.27 Aligned_cols=170 Identities=24% Similarity=0.442 Sum_probs=129.2
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCc----EEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGR----VIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
.+|...+.||+|+||+||+|... +|+ .||+|.+..... ....+|.+|++++.+++|+||++++|+|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 35667789999999999999964 333 689999865432 345679999999999999999999999987 67777
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 165 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE 165 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccc
Confidence 776
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||+.....++.++|||||||+++|++| |+.|++..... .+.+.+ ..+.. .-.+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~----~~~~~--~~~~--- 233 (279)
T cd05057 166 YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPDLL----EKGER--LPQP--- 233 (279)
T ss_pred eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHH----hCCCC--CCCC---
Confidence 3999999998999999999999999999999 99998754321 122221 11110 0011
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
..+...+.+++..||..+|.+||++.++++.|.....
T Consensus 234 ---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 234 ---PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1122346778889999999999999999999985443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-19 Score=200.66 Aligned_cols=171 Identities=22% Similarity=0.402 Sum_probs=129.2
Q ss_pred hcCCCCCCccccccceeEEEEEeC--------CCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS--------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG 711 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~ 711 (905)
.++|...+.||+|+||.||+|+.. +...||+|++.... .....+|.+|++++.++ +|+|||+++++|...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 456778899999999999999731 24579999987432 23356799999999999 699999999999887
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 170 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED 170 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence 77777765
Q ss_pred ------------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHH
Q 002581 720 ------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLE 768 (905)
Q Consensus 720 ------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~ 768 (905)
.|||||++.++.++.++|||||||++|||+| |+.|+......+ +.
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~- 246 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---LF- 246 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---HH-
Confidence 2999999999999999999999999999999 888876432211 11
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 769 WAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 769 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
.....+... +.+..+...+.+++.+|++.+|++|||+.|+++.|++..
T Consensus 247 ---~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 247 ---KLLREGHRM--------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred ---HHHHcCCCC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111111111 111122334667889999999999999999999998543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=194.26 Aligned_cols=164 Identities=22% Similarity=0.405 Sum_probs=126.1
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCC---CCCcceEEeEEEeCCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ---HRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~---H~niv~l~g~~~~~~~~~lv~ 718 (905)
.|+..+.||+|+||.||+|.. .+++.||||.++... ....+++.+|++++++++ |+|+++++|+|..+...++|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 466678899999999999995 578999999986432 334567899999999997 999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF 161 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence 8
Q ss_pred ----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 ----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 ----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..++ .++.++|||||||++|||+||+.|+....... +... .. ....+.+... ..
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~~-~~-----~~~~~~~~~~--~~ 227 (277)
T cd06917 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMML-IP-----KSKPPRLEDN--GY 227 (277)
T ss_pred cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhhc-cc-----cCCCCCCCcc--cC
Confidence 39999998765 46899999999999999999999987532211 1110 00 0111222110 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++.+|++.+|++||++.|+++
T Consensus 228 ~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 228 SKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 334777888999999999999999986
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-19 Score=199.71 Aligned_cols=169 Identities=24% Similarity=0.404 Sum_probs=125.8
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCc----EEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGR----VIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...+.||+|+||.||+|+. .+|+ .||+|.+..... ....+|.+|+.++++++|+|||+++|+|.... .++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT-IQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC-cee
Confidence 4567778999999999999985 3454 579998864332 23457999999999999999999999987543 445
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
++|
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 165 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 165 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc
Confidence 554
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||++.+..++.++|||||||++|||+| |+.|+..... ..+.+++. .+.. ...
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~~~~~~----~~~~--~~~---- 232 (303)
T cd05110 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPDLLE----KGER--LPQ---- 232 (303)
T ss_pred cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH----CCCC--CCC----
Confidence 4999999999999999999999999999998 8888864322 11222221 1110 000
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+..+...+.+++..||..+|++||+|+++++.|....
T Consensus 233 --~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 233 --PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred --CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1112335778889999999999999999999998543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-19 Score=195.60 Aligned_cols=161 Identities=22% Similarity=0.281 Sum_probs=121.3
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++|+||+++.+++..++..++|+|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45567899999999999995 468999999986432 1223458899999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|+|||++.+..++.++|||||||++|||+||+.|+........ ...+ ....... +.... ....
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~-~~~~~~~------~~~~~---~~~~ 229 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEV-DRRVLET------EEVYS---AKFS 229 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH-HHhhhcc------ccccC---ccCC
Confidence 69999999999999999999999999999999999875432111 1111 1111111 00111 1112
Q ss_pred HHHHHHHHHhccCCCCCCCCHH
Q 002581 796 LRVIGVALLCTQASPMMRPPMS 817 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ 817 (905)
..+.+++..|++.+|++||++.
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 230 EEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred HHHHHHHHHHccCCHhHcCCCc
Confidence 2356788899999999999954
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=217.23 Aligned_cols=174 Identities=18% Similarity=0.300 Sum_probs=130.9
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...++||+|+||.||+|+.. +|+.||||++.... ....++|.+|++++++++|||||+++++|.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46778899999999999999954 58999999996432 223567999999999999999999999999888888887
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 6
Q ss_pred ----------------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh
Q 002581 720 ----------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY 765 (905)
Q Consensus 720 ----------------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~ 765 (905)
+|||||++.+..++.++|||||||+++||+||+.|+.......
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k--- 238 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK--- 238 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---
Confidence 3999999999999999999999999999999999987532211
Q ss_pred HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHhcCccC
Q 002581 766 LLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRP-PMSRVVAMLAGDIEV 829 (905)
Q Consensus 766 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-sm~ev~~~L~~~~~~ 829 (905)
+. .. . .+.++.-.....+....+.+++.+|++.||++|| +++++.+.|+..++.
T Consensus 239 i~---~~----~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 IS---YR----D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hh---hh----h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 10 00 0 0111110000011223466788899999999995 577777877765543
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-19 Score=199.39 Aligned_cols=157 Identities=19% Similarity=0.320 Sum_probs=120.3
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+.. +++.||||++... .....+.+..|.+++..+ +||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999964 5889999999643 223445688999999876 79999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP 160 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.|+......+ +.+ .... +. . ..+.. ....+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~---~i~~-~~---~---~~p~~---~~~~~~ 224 (321)
T cd05591 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFE---SILH-DD---V---LYPVW---LSKEAV 224 (321)
T ss_pred cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHH---HHHc-CC---C---CCCCC---CCHHHH
Confidence 5999999999999999999999999999999999997543211 111 1111 11 1 11111 112356
Q ss_pred HHHHHhccCCCCCCC-------CHHHHHH
Q 002581 800 GVALLCTQASPMMRP-------PMSRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RP-------sm~ev~~ 821 (905)
+++..|++.||++|| ++.++++
T Consensus 225 ~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 225 SILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 777899999999999 6666664
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-19 Score=195.27 Aligned_cols=168 Identities=23% Similarity=0.385 Sum_probs=131.7
Q ss_pred HHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
..++.|...+.||+|+||.||+|... +++.||+|++..... ..+.|.+|++++++++|+|++++++++......++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45677888899999999999999976 688999999975433 4667999999999999999999999999999999998
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 7
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
+|+|||+..+..++.++|||||||++|||+||+.|+....... ....+ .. ..... ... ...
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~--~~~~~----~~-~~~~~-----~~~-~~~ 241 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR--ALFLI----TT-KGIPP-----LKN-PEK 241 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----Hh-cCCCC-----Ccc-hhh
Confidence 4999999998899999999999999999999999986432211 11111 11 11100 100 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+.+++.+|++.+|.+||++.+|+.
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 2234677888999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-19 Score=196.01 Aligned_cols=169 Identities=23% Similarity=0.400 Sum_probs=127.0
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCc----EEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGR----VIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
++|...++||+|+||+||+|+. ++|+ .||||++.... ....+++.+|+.++.+++|+||++++|+|.... .++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST-VQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC-cEE
Confidence 4577789999999999999984 4554 48999986433 334567999999999999999999999997543 445
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
++|
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 554
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|||||+..+..++.++|||||||++|||+| |+.|++.... ..+..++. .+... + .
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~----~~~~~----~-~- 232 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPDLLE----KGERL----P-Q- 232 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH----CCCcC----C-C-
Confidence 3999999999999999999999999999999 8888764332 12222221 11100 0 0
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
+......+.+++..||+.||++||++.|+++.|+...
T Consensus 233 --~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 233 --PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred --CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1112335777889999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-19 Score=198.56 Aligned_cols=157 Identities=21% Similarity=0.237 Sum_probs=122.0
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
+.||+|+||.||++.. .+|+.||||++... ......++.+|++++.+++||||+++.+++...+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999984 56899999999643 22334578899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 160 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||......+ +.. ... .+ +..++.. ....+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~---~~~---~i~-~~------~~~~p~~---~~~~~~ 224 (325)
T cd05594 161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE---LIL-ME------EIRFPRT---LSPEAK 224 (325)
T ss_pred ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH---HHH---HHh-cC------CCCCCCC---CCHHHH
Confidence 5999999999999999999999999999999999997543211 111 111 00 1111111 112356
Q ss_pred HHHHHhccCCCCCCC-----CHHHHHH
Q 002581 800 GVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
+++..|++.||++|+ ++.++++
T Consensus 225 ~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 225 SLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 677899999999996 8888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-19 Score=195.08 Aligned_cols=179 Identities=24% Similarity=0.356 Sum_probs=127.9
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.|.+|++++++++|+||+++++++......++|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35777889999999999999965 58999999986432 2234568999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence
Q ss_pred ----CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhH-HHHHHH-------HhhcCcc-ccccCC
Q 002581 720 ----GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYL-LEWAWN-------LHENNQS-LGLVDP 785 (905)
Q Consensus 720 ----gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l-~~~~~~-------~~~~~~~-~~~~d~ 785 (905)
.|+|||++.+ ..++.++|||||||++|||+||+.|+......+.... ...... .+..... .....+
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07847 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP 240 (286)
T ss_pred ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence 4899999876 5689999999999999999999999875443222111 000000 0000000 000001
Q ss_pred CCCC-CCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTE-FND-----KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~-~~~-----~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... .+. .....+.+++.+|++.+|++||++.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1100 000 11234678899999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-19 Score=197.59 Aligned_cols=175 Identities=24% Similarity=0.366 Sum_probs=132.0
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
++++++..++++|...+.||+|+||.||++.. .+++.+|||++.... ....++.+|+.++.++ +|+|+++++++|..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 56677788899999999999999999999995 568999999986432 2345688999999999 89999999999875
Q ss_pred C-----CeeEEEEc------------------------------------------------------------------
Q 002581 711 G-----ARRLLVYD------------------------------------------------------------------ 719 (905)
Q Consensus 711 ~-----~~~~lv~e------------------------------------------------------------------ 719 (905)
. ...++|+|
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence 4 35788887
Q ss_pred ----------------------CCCChhhhccC-----CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH
Q 002581 720 ----------------------GYLAPEYAMRG-----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 ----------------------gY~APE~~~~~-----~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.|+|||++... .++.|+|||||||++|||+||+.|+......+ .+.++.
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~~~~~-- 246 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TLFKIP-- 246 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HHHHHh--
Confidence 49999998654 36899999999999999999999987543211 111111
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
......+.+ +......+.+++.+|++.+|++||+|.|+++
T Consensus 247 ---~~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 ---RNPPPTLLH------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ---cCCCCCCCc------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111111 1112234777889999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-19 Score=194.95 Aligned_cols=166 Identities=22% Similarity=0.353 Sum_probs=122.5
Q ss_pred CCCCCccccccceeEEEEEeC----CCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe-----
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS----DGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR----- 713 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~----- 713 (905)
|...++||+|+||.||+|.+. +++.||||++... .....+++.+|++++++++|||||++++++.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455788999999999999853 3688999998643 22345679999999999999999999998764321
Q ss_pred -eEEEEc-------------------------------------------------------------------------
Q 002581 714 -RLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 714 -~~lv~e------------------------------------------------------------------------- 719 (905)
.++++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 133332
Q ss_pred -------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 -------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 -------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|++||+.....++.++|||||||++|||++ |+.|+..... ..+..+.. ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~----~~~~ 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLI----KGNR 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHH----cCCc
Confidence 4889999998899999999999999999999 7888764322 12222211 1110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
... +......+.+++.+|++.+|++||++.||++.|+.
T Consensus 234 -----~~~---~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 234 -----LKQ---PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred -----CCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 000 11223458889999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-19 Score=201.08 Aligned_cols=170 Identities=22% Similarity=0.368 Sum_probs=128.0
Q ss_pred cCCCCCCccccccceeEEEEEeC--------CCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS--------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA 712 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~ 712 (905)
.+|...+.||+|+||.||+|... .+..||+|.+.... ....++|.+|++++.++ +|+|||+++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35777899999999999999732 12478999986432 33456899999999999 8999999999998877
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++++|
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~ 171 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN 171 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence 6666665
Q ss_pred -----------------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHH
Q 002581 720 -----------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEW 769 (905)
Q Consensus 720 -----------------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~ 769 (905)
.|||||++.+..++.++|||||||++|||++ |+.|+..... .++
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~ 245 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EEL 245 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHH
Confidence 2999999999999999999999999999999 7888764321 111
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCc
Q 002581 770 AWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 770 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~ 827 (905)
.... ..+... +.+......+.+++.+||+.+|.+||+|.|+++.|+...
T Consensus 246 ~~~~-~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 246 FKLL-KEGHRM--------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHH-HcCCCC--------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 1111 111111 111122335778889999999999999999999998554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-19 Score=192.39 Aligned_cols=163 Identities=17% Similarity=0.243 Sum_probs=124.9
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIE-GARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~~~~lv~e 719 (905)
+|...+.||+|+||.||+++.. +++.||||++.... ....+.+.+|++++++++|+|++++++++.. ....++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 3667789999999999999954 57899999986432 2345679999999999999999999998764 345678887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||+..+..++.++|||||||+++||+||+.|++.... ..+...... +.. ...+..
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~~~-~~~--------~~~~~~ 225 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRIIE-GKL--------PPMPKD 225 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHh-cCC--------CCCccc
Confidence 59999999999999999999999999999999999874321 112222111 111 111122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+.+++.+|++.+|++||+|.++++
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 2335778889999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-19 Score=195.87 Aligned_cols=159 Identities=21% Similarity=0.280 Sum_probs=119.0
Q ss_pred cccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||+||++.. .+|+.||||++..... ...+.|..|++++++++|+||+++.+++......++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999985 4689999999864321 233568899999999999999999999999889999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++.+..++.++|||||||++|||+||+.||........ ....... +..... ..+......+
T Consensus 161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~---------~~~~~~-~~~~~~~~~~ 228 (280)
T cd05608 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQR---------ILNDSV-TYPDKFSPAS 228 (280)
T ss_pred cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHHh---------hcccCC-CCcccCCHHH
Confidence 49999999999999999999999999999999999875322110 0010111 111111 1111223346
Q ss_pred HHHHHHhccCCCCCCC-----CHHHHHH
Q 002581 799 IGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
.+++..|++.||++|| ++.++++
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 6788899999999999 5555554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-19 Score=191.23 Aligned_cols=167 Identities=20% Similarity=0.411 Sum_probs=127.9
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc------ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH------QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
+|+..+.||+|+||.||+|.. .+++.||+|++..... ...++|.+|++++++++|+|||++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999984 6789999999864321 124679999999999999999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 988
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
+|+|||+..+..++.++||||+|++++||++|+.|+........ .......... ...+
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~-----~~~~-- 230 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASA-----TTAP-- 230 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhcc-----CCCC--
Confidence 38999999888999999999999999999999999864322111 1111111100 0111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+......+.+++..|++.+|++||++.|+++
T Consensus 231 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 -SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 122223345677888999999999999999885
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=193.75 Aligned_cols=163 Identities=28% Similarity=0.457 Sum_probs=126.0
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+|...+.||+|+||.||+|.. +++.||+|++... ...+.|.+|+.++++++|+|++++++++.... .++|+|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~~ 82 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMSK 82 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCCC
Confidence 467789999999999999985 5788999998643 23467999999999999999999999987654 678887
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 162 (254)
T cd05083 83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162 (254)
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCce
Confidence 4
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
|+|||++.++.++.++|||||||+++||++ |+.|+......+ +.. ....+.. .+ . +......+.
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~---~~--~---~~~~~~~~~ 227 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VKE----CVEKGYR---ME--P---PEGCPADVY 227 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HHH----HHhCCCC---CC--C---CCcCCHHHH
Confidence 999999999999999999999999999998 888886433211 111 1111111 01 1 111233467
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 800 GVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
+++.+||+.+|++||+|++|++.|+.
T Consensus 228 ~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 228 VLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 78899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-19 Score=194.41 Aligned_cols=174 Identities=24% Similarity=0.440 Sum_probs=131.5
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
.++.++..+.+.|...+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 46677777888999999999999999999995 568999999986432 3346788999999999 69999999999863
Q ss_pred ------CCeeEEEEc-----------------------------------------------------------------
Q 002581 711 ------GARRLLVYD----------------------------------------------------------------- 719 (905)
Q Consensus 711 ------~~~~~lv~e----------------------------------------------------------------- 719 (905)
....++|+|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEee
Confidence 456788887
Q ss_pred ---------------------CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH
Q 002581 720 ---------------------GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773 (905)
Q Consensus 720 ---------------------gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~ 773 (905)
.|+|||.+. ...++.++|||||||++|||+||+.|+......+.... .
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~------~ 238 (282)
T cd06636 165 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL------I 238 (282)
T ss_pred CcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh------H
Confidence 499999876 35688999999999999999999999865432211110 0
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 774 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. ....+.+. .......+.+++..||+.+|.+||++.|+++
T Consensus 239 -~-----~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 -P-----RNPPPKLK--SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -h-----hCCCCCCc--ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 00011111 0112234777888999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=196.69 Aligned_cols=175 Identities=20% Similarity=0.320 Sum_probs=125.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|+..+.||+|++|.||+|.. .+|+.||||++.... ....+.|.+|++++++++|+|++++++++..++..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 45678899999999999995 479999999986432 2234678999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 160 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV 160 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence
Q ss_pred ---CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC-----------c----cc
Q 002581 720 ---GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN-----------Q----SL 780 (905)
Q Consensus 720 ---gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~-----------~----~~ 780 (905)
.|+|||++.+. .++.++|||||||++|||+||+.|+....... .+........... . ..
T Consensus 161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 48999988764 57999999999999999999999986543211 1111111100000 0 00
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+............+.+++.+|++.+|.+||||.||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000111111111235678889999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-19 Score=190.13 Aligned_cols=167 Identities=22% Similarity=0.368 Sum_probs=132.0
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||.||+|+.. +++.||||++..... ...++|.+|++.+.+++|+||+++++++......++|+|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36778899999999999999965 589999999975443 345789999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 160 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF 160 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH-H
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK-E 794 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~-~ 794 (905)
.|+|||+..+..++.++||||||+++|||+||+.|+..........+..++.. . ..+.+ +.. .
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----~-----~~~~~---~~~~~ 228 (264)
T cd06623 161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----G-----PPPSL---PAEEF 228 (264)
T ss_pred eecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----C-----CCCCC---CcccC
Confidence 59999999999999999999999999999999999875432122222222211 0 01111 111 2
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++..|++.+|++||++.|+++
T Consensus 229 ~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 229 SPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 345777888999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-19 Score=194.07 Aligned_cols=165 Identities=22% Similarity=0.289 Sum_probs=124.0
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...++||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.+++|+|++++++++...+..++|+|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 56678899999999999995 4689999999864321 223458899999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|||||++.+..++.++|||||||++|||++|+.||............ ...... . ..... ....
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~---~~~~~~-----~-~~~~~---~~~~ 229 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLVKE-----V-QEEYS---EKFS 229 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH---Hhhhhh-----h-hhhcC---ccCC
Confidence 599999999999999999999999999999999999754321110000 011000 0 00111 1112
Q ss_pred HHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPs-----m~ev~~ 821 (905)
..+.+++..|++.||++||| +.|+++
T Consensus 230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 230 PDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 23567788999999999999 677765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-19 Score=194.63 Aligned_cols=167 Identities=18% Similarity=0.332 Sum_probs=124.7
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||++.. .+++.||||++.... ......|.+|+.++.++. |+|||+++|++......++++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 344567899999999999995 468999999986433 234567999999999996 9999999999988777777765
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence
Q ss_pred -------CCCChhhhccC---CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC-
Q 002581 720 -------GYLAPEYAMRG---HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT- 788 (905)
Q Consensus 720 -------gY~APE~~~~~---~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~- 788 (905)
.|+|||++.+. .++.++|||||||++|||+||+.|+.... ...+-+..... + ..+.+.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~-~-----~~~~~~~ 233 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVK-G-----DPPILSN 233 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcC-C-----CCCcCCC
Confidence 59999999876 68999999999999999999999986432 11111111111 0 111221
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.........+.+++.+|++.+|++|||+.||++
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred cCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111123345778888999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-19 Score=198.24 Aligned_cols=156 Identities=21% Similarity=0.309 Sum_probs=117.3
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|+.. +++.||||+++... ....+.+..|..++... +||||+++++++..++..++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 58899999996432 23345577788887754 89999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~ 160 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.|+......+ +. ... ... .+.++... ...+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~---~~i-~~~------~~~~~~~~---~~~~~ 224 (316)
T cd05592 161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LF---DSI-LND------RPHFPRWI---SKEAK 224 (316)
T ss_pred cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HH---HHH-HcC------CCCCCCCC---CHHHH
Confidence 5999999999999999999999999999999999997543211 11 111 110 11121111 22355
Q ss_pred HHHHHhccCCCCCCCCHHHHH
Q 002581 800 GVALLCTQASPMMRPPMSRVV 820 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~ 820 (905)
+++..|++.+|.+||++.+.+
T Consensus 225 ~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 225 DCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHHHHHccCCHHHcCCChHHH
Confidence 677899999999999986433
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-19 Score=192.06 Aligned_cols=169 Identities=22% Similarity=0.355 Sum_probs=129.7
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|...+.||+|+||.||++... +++.||+|++.... ....++|.+|++++++++|+||++++++|......++|+|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5667789999999999999965 68999999986543 2345679999999999999999999999999888899887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccC
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|+|||+..+..++.++||||||++++||+||+.|+....... ....+.+....... .+.+.. ......
T Consensus 162 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~--~~~~~~ 232 (265)
T cd06605 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVNEP------PPRLPS--GKFSPD 232 (265)
T ss_pred ChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhcCC------CCCCCh--hhcCHH
Confidence 5999999999999999999999999999999999986542111 11222222221110 111111 012334
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.+++..||..+|++|||+.|++.
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhh
Confidence 677888999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-19 Score=201.89 Aligned_cols=181 Identities=21% Similarity=0.262 Sum_probs=128.1
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA----- 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~----- 712 (905)
..++|...+.||+|+||.||++.. ..++.||||++... .....+++.+|+.+++.++|+||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 456888889999999999999984 46889999999643 2233467889999999999999999999886432
Q ss_pred -eeEEEEc------------------------------------------------------------------------
Q 002581 713 -RRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 713 -~~~lv~e------------------------------------------------------------------------ 719 (905)
..++|+|
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 174 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 174 (355)
T ss_pred ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence 4578887
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HH---------------HHHHHHhh
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LL---------------EWAWNLHE 775 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~---------------~~~~~~~~ 775 (905)
.|+|||++.+..++.++|||||||+++||+||+.||......+... .. ..+.....
T Consensus 175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (355)
T cd07874 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254 (355)
T ss_pred cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHh
Confidence 5999999999999999999999999999999999987543211100 00 00111110
Q ss_pred cC-ccccccCCCC---------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 NN-QSLGLVDPTL---------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 ~~-~~~~~~d~~l---------~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .......+.. ..........+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred cCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00 0000000000 0011112335678889999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-19 Score=198.74 Aligned_cols=156 Identities=20% Similarity=0.315 Sum_probs=119.2
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+.||+|+||+||+|... +++.||||+++... ....+.+..|..++... +||||+++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 57899999996532 23345678888888865 99999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||...... .+.+.+ ... .+.++... ...+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~i----~~~------~~~~~~~~---~~~~~ 224 (316)
T cd05619 161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQSI----RMD------NPCYPRWL---TREAK 224 (316)
T ss_pred cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HhC------CCCCCccC---CHHHH
Confidence 499999999999999999999999999999999998754321 111111 111 11121111 12356
Q ss_pred HHHHHhccCCCCCCCCHH-HHH
Q 002581 800 GVALLCTQASPMMRPPMS-RVV 820 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~-ev~ 820 (905)
++..+|++.+|.+||++. ++.
T Consensus 225 ~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 225 DILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHhccCHhhcCCChHHHH
Confidence 677899999999999997 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=209.08 Aligned_cols=173 Identities=18% Similarity=0.261 Sum_probs=121.4
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--------C
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--------A 712 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--------~ 712 (905)
+++|...++||+|+||.||+|.. .+++.||||++... .....+|+.+|++++|+|||++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45788899999999999999995 46899999998532 12345799999999999999999886432 1
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 3456776
Q ss_pred --------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC-------
Q 002581 720 --------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN------- 777 (905)
Q Consensus 720 --------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~------- 777 (905)
.|||||++.+. .++.++|||||||++|||+||+.||......+. +...+ ......
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~-~~~~~p~~~~~~~ 297 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRII-QVLGTPTEDQLKE 297 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH-HHhCCCCHHHHHH
Confidence 49999998764 699999999999999999999999975443221 11111 110000
Q ss_pred ---ccccccCCCCC------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 778 ---QSLGLVDPTLT------EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 ---~~~~~~d~~l~------~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...++--+.+. .++......+.+++..|++.||.+|||+.|+++
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000001110 011112245778888999999999999999985
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-19 Score=194.72 Aligned_cols=181 Identities=19% Similarity=0.237 Sum_probs=128.3
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++|+||+++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 467888899999999999999985 4689999999864432 23356889999999999999999999999999999998
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 7
Q ss_pred -----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc-----------Cccccc
Q 002581 720 -----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN-----------NQSLGL 782 (905)
Q Consensus 720 -----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~ 782 (905)
.|+|||+..+. .++.++|||||||++|||+||+.|++............|....... ....+.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 49999998764 5889999999999999999999998754322111111111000000 000000
Q ss_pred cC----CCCCCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 VD----PTLTEFN--DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d----~~l~~~~--~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. +.+.... ......+.+++.+|++.||++||||.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00 0000000 001234567888999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-19 Score=189.86 Aligned_cols=166 Identities=23% Similarity=0.440 Sum_probs=126.9
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcc--cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQ--GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|.. .+++.||||.+...... ..+.+.+|++++++++|+||++++|++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 366778999999999999995 46899999999754332 46779999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 160 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence
Q ss_pred -------CCCChhhhccCC---CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 -------GYLAPEYAMRGH---LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 -------gY~APE~~~~~~---~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||++.+.. ++.++||||||++++|+++|+.||....... .. ...... ...+.++.
T Consensus 161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~--~~---~~~~~~------~~~~~~~~ 229 (264)
T cd06626 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF--QI---MFHVGA------GHKPPIPD 229 (264)
T ss_pred cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH--HH---HHHHhc------CCCCCCCc
Confidence 489999998776 8999999999999999999999986432111 11 111100 11122211
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .....+.+++.+|++.+|.+||++.|++.
T Consensus 230 ~~-~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 SL-QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cc-ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 11233567778999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-19 Score=203.59 Aligned_cols=188 Identities=18% Similarity=0.262 Sum_probs=128.4
Q ss_pred CHHHHHHHh----cCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEe
Q 002581 634 SYAELRSAT----KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706 (905)
Q Consensus 634 ~~~~l~~~t----~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g 706 (905)
+.+|+..++ ++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++|+||+++++
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 81 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD 81 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhh
Confidence 444555553 7788889999999999999995 56899999998643 2223456899999999999999999999
Q ss_pred EEEeCC------eeEEEEc-------------------------------------------------------------
Q 002581 707 CCIEGA------RRLLVYD------------------------------------------------------------- 719 (905)
Q Consensus 707 ~~~~~~------~~~lv~e------------------------------------------------------------- 719 (905)
++.... ..++|+|
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 82 VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eecccccCCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 987542 3477766
Q ss_pred -----------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH--------HH
Q 002581 720 -----------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW--------NL 773 (905)
Q Consensus 720 -----------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~--------~~ 773 (905)
.|+|||+..+ ..++.++|||||||++|||+||+.||...........+.+.. ..
T Consensus 162 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 162 GLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 3899999876 468999999999999999999999997543211111100000 00
Q ss_pred hhcCccccccC--CCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 774 HENNQSLGLVD--PTLT-----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 774 ~~~~~~~~~~d--~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.........++ +... .........+.+++..|++.||.+||++.||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000 0000 000011234677889999999999999999985
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-19 Score=196.33 Aligned_cols=160 Identities=19% Similarity=0.280 Sum_probs=121.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++.++ +|+||+++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 457899999997432 22345688999999988 69999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP 160 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|+|||++.+..++.++|||||||+++||+||+.||+...........+++......... .++.. ....+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~---~~~~~~ 231 (327)
T cd05617 161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI------RIPRF---LSVKAS 231 (327)
T ss_pred ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC------CCCCC---CCHHHH
Confidence 599999999999999999999999999999999999754332222233344333322111 11111 112356
Q ss_pred HHHHHhccCCCCCCCCHH
Q 002581 800 GVALLCTQASPMMRPPMS 817 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ 817 (905)
+++.+|++.||++||++.
T Consensus 232 ~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 232 HVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHHhccCHHHcCCCC
Confidence 677899999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-19 Score=191.09 Aligned_cols=165 Identities=25% Similarity=0.407 Sum_probs=119.1
Q ss_pred CccccccceeEEEEEeCCC---cEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTLSDG---RVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
+.||+|+||+||+|...++ ..+++|.+.... ....+.|.+|+.++++++|||||+++|+|......++|+|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999985433 356777765432 2345689999999999999999999999999888999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence
Q ss_pred -----CCCChhhhcc-------CCCCccCceEeechhhHHhHhC-CCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 -----GYLAPEYAMR-------GHLTEKADVFSFGVVALEVISG-RANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -----gY~APE~~~~-------~~~t~k~DVySfGvvLlElltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||+... ..++.++|||||||++|||+|+ +.|+...... +....... +......++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~-~~~~~~~~~~ 233 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR------EVLNHVIK-DQQVKLFKPQ 233 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHh-hcccccCCCc
Confidence 4899998753 3467899999999999999985 5566533211 11122221 2223445555
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 787 l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+.....+ .+.++...|| .+|++||+|+||++.|.
T Consensus 234 ~~~~~~~---~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 LELPYSE---RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCCcH---HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 5322222 3455667899 57999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-19 Score=202.12 Aligned_cols=181 Identities=20% Similarity=0.241 Sum_probs=127.6
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC------
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------ 711 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------ 711 (905)
..++|...+.||+|+||.||+|.. ..++.||||++... .....+++.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 346788889999999999999984 46889999999643 223456788999999999999999999987643
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 181 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence 34688887
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHH---------HH-------HHHHhh
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL---------EW-------AWNLHE 775 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~---------~~-------~~~~~~ 775 (905)
+|+|||++.+..++.++|||||||++|||+||+.||......+...-+ ++ +.....
T Consensus 182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (364)
T cd07875 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261 (364)
T ss_pred ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence 599999999999999999999999999999999999754322111000 00 000000
Q ss_pred cCc-cc-----cccCCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 NNQ-SL-----GLVDPTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 ~~~-~~-----~~~d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
... .. +.....+ ..........+.+++.+|++.||.+|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00 0000000 0001111234677888999999999999999886
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.1e-20 Score=192.33 Aligned_cols=158 Identities=20% Similarity=0.296 Sum_probs=123.6
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
-++|...++||+|+||+||..+. ++++.+|+|+++.+. ..+.+...+|..+|.+++||.||+++-.+.+.+..|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 45788899999999999999984 568999999997543 23456688999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
.|
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~ 183 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR 183 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc
Confidence 98
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||++.+..|+..+|.||+||+++||+||.+||..... ..+....... +. +..+.+..+
T Consensus 184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~------~~~~~~I~~~-k~-----~~~p~~ls~ 251 (357)
T KOG0598|consen 184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV------KKMYDKILKG-KL-----PLPPGYLSE 251 (357)
T ss_pred cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH------HHHHHHHhcC-cC-----CCCCccCCH
Confidence 59999999999999999999999999999999999985432 2233332221 10 111222223
Q ss_pred HHHHHHHHHHHhccCCCCCCC
Q 002581 794 EALRVIGVALLCTQASPMMRP 814 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RP 814 (905)
+ +..+...-+..||++|-
T Consensus 252 ~---ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 252 E---ARDLLKKLLKRDPRQRL 269 (357)
T ss_pred H---HHHHHHHHhccCHHHhc
Confidence 3 34455577899999995
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-19 Score=198.36 Aligned_cols=154 Identities=24% Similarity=0.386 Sum_probs=118.4
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|+.. +++.||||++... .....+.+.+|.+++... +||||+++++++...+..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 6899999998643 223456788999999877 69999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP 160 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
+|||||++.+..++.++|||||||++|||+||+.||......+ +.. ... .+. . .+... ....+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~---~i~-~~~---~---~~~~~---~~~~~~ 224 (320)
T cd05590 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFE---AIL-NDE---V---VYPTW---LSQDAV 224 (320)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH---HHh-cCC---C---CCCCC---CCHHHH
Confidence 5999999999999999999999999999999999997543211 111 111 111 0 11111 122356
Q ss_pred HHHHHhccCCCCCCCCHHH
Q 002581 800 GVALLCTQASPMMRPPMSR 818 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~e 818 (905)
+++..|++.||.+||++.+
T Consensus 225 ~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 225 DILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHHHcccCHHHCCCCCC
Confidence 6778999999999999843
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-19 Score=192.96 Aligned_cols=164 Identities=25% Similarity=0.382 Sum_probs=128.0
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
|...+.||+|++|.||+|.. .+++.||||++........+.+.+|+.++++++|+||+++++++..++..++|+|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457999999999999995 5689999999875544556679999999999999999999999999999999987
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 180 (285)
T cd06648 101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 180 (285)
T ss_pred CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCcc
Confidence 4
Q ss_pred CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 002581 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIG 800 (905)
Q Consensus 721 Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 800 (905)
|+|||+..+..++.++|||||||+++||+||+.|+...... .+...... .. .+.+.. .......+.+
T Consensus 181 y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~~~~-~~-----~~~~~~-~~~~~~~l~~ 247 (285)
T cd06648 181 WMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKRIRD-NL-----PPKLKN-LHKVSPRLRS 247 (285)
T ss_pred ccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHh-cC-----CCCCcc-cccCCHHHHH
Confidence 99999999889999999999999999999999998643221 11111111 10 111111 1112235778
Q ss_pred HHHHhccCCCCCCCCHHHHHH
Q 002581 801 VALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 801 l~~~C~~~~P~~RPsm~ev~~ 821 (905)
++.+|++.+|++||++.++++
T Consensus 248 li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 248 FLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHcccChhhCcCHHHHcc
Confidence 888999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=198.80 Aligned_cols=168 Identities=23% Similarity=0.313 Sum_probs=123.2
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.|...+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++.+++|+|||++++++.+.+..++|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 467788999999999999984 568999999996432 2234679999999999999999999999999999999998
Q ss_pred ----------------------------------------------------------------C---------------
Q 002581 720 ----------------------------------------------------------------G--------------- 720 (905)
Q Consensus 720 ----------------------------------------------------------------g--------------- 720 (905)
|
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 2
Q ss_pred ----------------------------------------------------CCChhhhccCCCCccCceEeechhhHHh
Q 002581 721 ----------------------------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEV 748 (905)
Q Consensus 721 ----------------------------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlEl 748 (905)
|||||++.+..++.++|||||||+++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 8999999999999999999999999999
Q ss_pred HhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 749 ISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 749 ltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+||+.||......+.. ........ ...-+.....+.+ +..++.- +.|+..+|..||++.||++
T Consensus 242 ltG~~Pf~~~~~~~~~------~~i~~~~~--~~~~~~~~~~s~~-~~dli~~-ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 242 LVGQPPFLAPTPTETQ------LKVINWEN--TLHIPPQVKLSPE-AVDLITK-LCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HhCCCCCcCCCHHHHH------HHHHcccc--ccCCCCCCCCCHH-HHHHHHH-HccCcccccCCCCHHHHhc
Confidence 9999999754332211 01110000 0000111122232 2222221 2477888888999999986
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-19 Score=189.81 Aligned_cols=163 Identities=31% Similarity=0.534 Sum_probs=126.2
Q ss_pred CCCCccccccceeEEEEEeCC-----CcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 646 DPSNKLGEGGYGPVYKGTLSD-----GRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~~~-----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
...+.||+|+||.||+|+..+ +..||+|++...... ..+.|.+|++.+.+++|+||+++++++...+..++++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456889999999999999653 388999999754433 46789999999999999999999999998888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|+|||+..+..++.++||||+|++++||++ |+.|++.... ..+.+.+. .+... .. .
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~----~~~~~-----~~---~ 226 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYLK----KGYRL-----PK---P 226 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHh----cCCCC-----CC---C
Confidence 4899999988999999999999999999999 7777764221 11222211 11110 01 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
......+.+++.+|+..+|++|||+.|+++.|
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11234577788999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-19 Score=196.60 Aligned_cols=162 Identities=23% Similarity=0.364 Sum_probs=125.4
Q ss_pred CCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 648 SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
...||+|+||.||++.. .++..||||++........+.|.+|+.++++++|+||+++++++..++..++|+|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 46699999999999985 4688999999875544556679999999999999999999999999999999998
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
.|+|
T Consensus 107 ~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~a 186 (292)
T cd06658 107 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMA 186 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccC
Confidence 4999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVAL 803 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~ 803 (905)
||+..+..++.++|||||||+++||+||+.|+......+. .. ... ..+.+.+... ......+..++.
T Consensus 187 PE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~----~~~-----~~~~~~~~~~-~~~~~~~~~li~ 253 (292)
T cd06658 187 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA---MR----RIR-----DNLPPRVKDS-HKVSSVLRGFLD 253 (292)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH----HHH-----hcCCCccccc-cccCHHHHHHHH
Confidence 9999988999999999999999999999999874332111 11 010 1111111110 011223556777
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 002581 804 LCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 804 ~C~~~~P~~RPsm~ev~~~ 822 (905)
.|++.+|.+|||+.|+++.
T Consensus 254 ~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 254 LMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-19 Score=193.77 Aligned_cols=168 Identities=26% Similarity=0.449 Sum_probs=128.7
Q ss_pred cCCCCCCccccccceeEEEEEeC------CCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
++|.....||+|+||+||+|+.. +.+.||+|.+...... ..++|.+|++++++++|+|||+++++|......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56778889999999999999853 2467999998654333 3567999999999999999999999998888888
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence 8887
Q ss_pred ------------------CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccc
Q 002581 720 ------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSL 780 (905)
Q Consensus 720 ------------------gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 780 (905)
.|+|||++.++.++.++|||||||+++||++ |..|+...... ..... ...+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~~----~~~~~~~ 237 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLNR----LQAGKLE 237 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHHH----HHcCCcC
Confidence 2999999998899999999999999999999 67777533221 11111 1111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 781 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
. + . .......+.+++.+|++.+|.+||++.|++++|.
T Consensus 238 ~---~-~---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 L---P-V---PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred C---C-C---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0 0 0 1112235777889999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.4e-19 Score=189.21 Aligned_cols=165 Identities=27% Similarity=0.444 Sum_probs=118.4
Q ss_pred CccccccceeEEEEEeCC---CcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 649 NKLGEGGYGPVYKGTLSD---GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
+.||+|+||+||+|+..+ ...+|||.+.... .....+|.+|+++++.++|+||++++|+|......++|+|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999998543 3578999876432 2335679999999999999999999999999988999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence
Q ss_pred ------CCCChhhhcc-------CCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 ------GYLAPEYAMR-------GHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 ------gY~APE~~~~-------~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|+|||+... ..++.++|||||||++|||+| |+.|+......+ ... ..... ......++
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~---~~~~~-~~~~~~~~ 233 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ---VLK---QVVRE-QDIKLPKP 233 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHH---HHhhc-cCccCCCC
Confidence 2999998753 457889999999999999999 677775432211 111 11111 11122233
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.+.. .....+.++...|| .||++|||++||++.|.
T Consensus 234 ~~~~---~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 QLDL---KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cccc---cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 3321 12223455667888 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-19 Score=201.84 Aligned_cols=178 Identities=18% Similarity=0.234 Sum_probs=126.3
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----ee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~ 714 (905)
+++|...+.||+|+||.||+|+. .+|+.||||++.... .....++.+|+.++++++|+|||++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46788899999999999999984 578999999986432 233567899999999999999999999876543 46
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 163 (336)
T cd07849 84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT 163 (336)
T ss_pred EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence 77776
Q ss_pred ----------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC---ccccccCC
Q 002581 720 ----------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN---QSLGLVDP 785 (905)
Q Consensus 720 ----------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~d~ 785 (905)
.|||||++.+ ..++.++|||||||+++||+||+.|+....... ...++....... ....+.+.
T Consensus 164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHHHHHhhch
Confidence 3999998765 468999999999999999999999986432211 111111111100 00000100
Q ss_pred C-------C---CCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 786 T-------L---TEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 786 ~-------l---~~~~-----~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
. + .... ......+.+++.+|++.+|++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 0000 1113457788999999999999999999974
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-19 Score=213.56 Aligned_cols=245 Identities=22% Similarity=0.357 Sum_probs=184.5
Q ss_pred CCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEe
Q 002581 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYI 155 (905)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L 155 (905)
.+.+.|+++++.++ .+|..+. ++|+.|+|++|.|+ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45788999999988 4676553 57999999999998 5676654 58999999999988 6777654 47999999
Q ss_pred cccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCC
Q 002581 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235 (905)
Q Consensus 156 ~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~ 235 (905)
++|++. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+++. +|..+. ++|+.|++++|.+...
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC
Confidence 999987 6777764 57999999999988 5777664 589999999999884 565443 4688888888877643
Q ss_pred ChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCCCCC
Q 002581 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSEN 315 (905)
Q Consensus 236 ~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~ 315 (905)
+.. + .++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+...
T Consensus 320 P~~-l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~s 389 (754)
T PRK15370 320 PET-L--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLPAA 389 (754)
T ss_pred Ccc-c--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHHHH
Confidence 221 1 2578888899888875 666553 68899999999887 5776553 68889999999888 466666567
Q ss_pred CCEEEeecCCCCCCCCcccc------cccc-ccccccccee
Q 002581 316 LQNIDLSYNHLSGPFPSWVT------SSLQ-MNLAVNNFTF 349 (905)
Q Consensus 316 L~~L~Ls~N~lsg~ip~~~~------~~l~-l~l~~N~~~~ 349 (905)
|+.|++++|+|+ .+|..+. ..+. +++.+|+|+.
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 888999999887 5565432 2233 7777777763
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-19 Score=193.09 Aligned_cols=175 Identities=22% Similarity=0.350 Sum_probs=121.0
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhC---CCCCcceEEeEEEeC-----C
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAV---QHRNLVRLYGCCIEG-----A 712 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~---~H~niv~l~g~~~~~-----~ 712 (905)
+|...+.||+|+||+||+|.. .+++.||||.++... ......+.+|++++.++ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 366778999999999999985 468999999986432 22234567788777665 699999999998642 3
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 4677876
Q ss_pred -----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---Ccc------
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQS------ 779 (905)
Q Consensus 720 -----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~------ 779 (905)
.|+|||++.+..++.++|||||||+++||++|++||......+. +... ...... ...
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 161 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKI-FDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHH-HHHhCCCChhhCcccccc
Confidence 49999999999999999999999999999999999865432211 1111 111000 000
Q ss_pred -ccccCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 -LGLVDPTLT----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 -~~~~d~~l~----~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+... ...++....+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000111100 011112234677888999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-19 Score=196.64 Aligned_cols=159 Identities=21% Similarity=0.242 Sum_probs=118.9
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHH-HHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIA-TISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~-~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|+. .+|+.||||++... .....+++.+|.. +++.++|||||++++++...+..++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999995 56899999999643 2233456677765 4677999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP 160 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||......+ + ...... +.. .+.+ .. ...+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~---~~~~~~-~~~--~~~~---~~----~~~~~ 224 (325)
T cd05604 161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---M---YDNILH-KPL--VLRP---GA----SLTAW 224 (325)
T ss_pred hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---H---HHHHHc-CCc--cCCC---CC----CHHHH
Confidence 5999999999999999999999999999999999987532211 1 111111 110 1111 11 22356
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHH
Q 002581 800 GVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
+++..|++.+|.+||++++.++.+
T Consensus 225 ~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 225 SILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HHHHHHhccCHHhcCCCCCCHHHH
Confidence 678899999999999987544433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-19 Score=195.78 Aligned_cols=176 Identities=20% Similarity=0.347 Sum_probs=127.3
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||+||+|... +|+.||||++..... ...+.|.+|++++++++|+||+++++++......++|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46778899999999999999964 689999999864322 234678999999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence
Q ss_pred ------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC--ccc----c-----
Q 002581 720 ------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN--QSL----G----- 781 (905)
Q Consensus 720 ------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~--~~~----~----- 781 (905)
.|+|||++.+. .++.++|||||||++|||+||+.|+......+... . +....... ... .
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF--K-IFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--H-HHHHhCCCChhhccccccchhhh
Confidence 49999998764 57999999999999999999999987543221111 0 00000000 000 0
Q ss_pred -----ccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 782 -----LVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 782 -----~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+....+.....+.+++.+|++.+|++||+|.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000001111234677888999999999999999986
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-20 Score=216.60 Aligned_cols=266 Identities=26% Similarity=0.305 Sum_probs=221.9
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
+++.|...+|-++...+ -..=.+|+++++++|+++ .+|.+++.+.+|+.|+..+|+|+ .+|..+..+++|++|++.
T Consensus 220 ~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAA 295 (1081)
T ss_pred chheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhh
Confidence 55666666666652222 123457999999999998 46799999999999999999996 789999999999999999
Q ss_pred cccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCc-cceecccCccccCCCCCCCCCcccCCeeecccccCCCC
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHN-MQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP 211 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~-L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~ 211 (905)
+|.+. .+|+..+.++.|++|+|..|++....+..+..+.. |..|..+.|.+....--.=.....|+.|++.+|.++..
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~ 374 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDS 374 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccccc
Confidence 99998 78888999999999999999987544434444443 77888888877643311223467899999999999988
Q ss_pred CCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCC
Q 002581 212 IPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNI 291 (905)
Q Consensus 212 ~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l 291 (905)
.-..+.+..+|+.|+|++|++...+...+.++..|+.|+|++|.++ .+|..+.++..|++|...+|++. ..| .+..+
T Consensus 375 c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l 451 (1081)
T KOG0618|consen 375 CFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQL 451 (1081)
T ss_pred chhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhc
Confidence 8888999999999999999998888888999999999999999998 68899999999999999999998 677 78999
Q ss_pred CCCCEEECcCCcCcc-CCCCCCC-CCCCEEEeecCCC
Q 002581 292 DSLNYLFLGNNSLSG-TLPTQKS-ENLQNIDLSYNHL 326 (905)
Q Consensus 292 ~~L~~L~Ls~N~l~g-~~p~~~~-~~L~~L~Ls~N~l 326 (905)
+.|+.+|++.|+|+. .+|.... ++|++|||++|.-
T Consensus 452 ~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 452 PQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred CcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 999999999999984 4555544 8999999999973
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.8e-19 Score=196.09 Aligned_cols=154 Identities=21% Similarity=0.260 Sum_probs=116.1
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHH-HHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIA-TISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||+||+|+. .+|+.||||++.... ....+++.+|.. +++.++|||||++++++...+..++|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999996 468999999996432 223345666665 4678999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||......+ ....... +.. .+.+ .. ...+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~-~~~--~~~~---~~----~~~~~ 224 (323)
T cd05575 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MYDNILN-KPL--RLKP---NI----SVSAR 224 (323)
T ss_pred hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HHHHHHc-CCC--CCCC---CC----CHHHH
Confidence 5999999999999999999999999999999999987532211 1111111 110 0111 11 22366
Q ss_pred HHHHHhccCCCCCCCCHHH
Q 002581 800 GVALLCTQASPMMRPPMSR 818 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~e 818 (905)
+++.+|++.+|.+||++++
T Consensus 225 ~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 225 HLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred HHHHHHhhcCHHhCCCCCC
Confidence 7788999999999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-19 Score=189.93 Aligned_cols=163 Identities=21% Similarity=0.379 Sum_probs=124.9
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEe--CCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIE--GARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~--~~~~~lv~ 718 (905)
+|...+.||.|+||.||++.. .+++.||+|++... .....+++.+|++++++++|+||+++++++.. +...++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 366678899999999999984 56889999998643 23345678999999999999999999998764 34556777
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 6
Q ss_pred --------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 --------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 --------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|+|||++....++.++|||||||+++||+||+.|+..... ..+.+.+ ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~----~~~~------- 226 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLASKI----KEGK------- 226 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHHHHH----hcCC-------
Confidence 58999999999999999999999999999999999875431 1122111 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+......+.+++.+|++.+|++||+|.+|++
T Consensus 227 -~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 -FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11122223345778889999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-19 Score=193.78 Aligned_cols=174 Identities=22% Similarity=0.374 Sum_probs=126.2
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEEEc
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLVYD 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv~e 719 (905)
|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 445678999999999999965 58999999997542 33456799999999999999999999999987 78899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence
Q ss_pred -----CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---Cc---cccc-----
Q 002581 720 -----GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQ---SLGL----- 782 (905)
Q Consensus 720 -----gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~---~~~~----- 782 (905)
.|+|||.+.+ ..++.++|||||||++|||+||+.|++....... ...+...... .. ..++
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhccccccchhhhh
Confidence 3999998765 4689999999999999999999999875432221 1111111100 00 0000
Q ss_pred cCCC------CCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 VDPT------LTEFNDK-EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d~~------l~~~~~~-~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+. +.+.... +...+.+++..|++.+|.+||++.+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000 0000001 2456788999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-19 Score=190.41 Aligned_cols=157 Identities=26% Similarity=0.474 Sum_probs=118.2
Q ss_pred CccccccceeEEEEEeCC-C----------cEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 649 NKLGEGGYGPVYKGTLSD-G----------RVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~-g----------~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
+.||+|+||.||+|...+ + ..||+|.+...... ...|.+|+.++++++|+||++++|+|.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 469999999999999754 3 25788887644332 6789999999999999999999999987 677888
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 87
Q ss_pred ----------CCCChhhhccC--CCCccCceEeechhhHHhHhC-CCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 ----------GYLAPEYAMRG--HLTEKADVFSFGVVALEVISG-RANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 ----------gY~APE~~~~~--~~t~k~DVySfGvvLlElltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||++... .++.++|||||||++|||++| ..|+......+. ..+ +.... .
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~---~~~----~~~~~-------~ 224 (259)
T cd05037 159 LSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK---ERF----YQDQH-------R 224 (259)
T ss_pred ccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH---HHH----HhcCC-------C
Confidence 48999999877 899999999999999999995 666654322111 111 00000 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 787 l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
..... ...+.+++..||+.+|.+||||.||++.|+
T Consensus 225 ~~~~~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 225 LPMPD---CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCCC---chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000 145778889999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-19 Score=197.40 Aligned_cols=167 Identities=20% Similarity=0.224 Sum_probs=127.0
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|... +|+.||||++.... ....+.|.+|++++..++|+||+++++++.+++..++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36778899999999999999954 68999999996432 234567999999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------C-----
Q 002581 719 D-------------------------------------------------------------------------G----- 720 (905)
Q Consensus 719 e-------------------------------------------------------------------------g----- 720 (905)
| .
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 8 2
Q ss_pred -----------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh
Q 002581 721 -----------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY 765 (905)
Q Consensus 721 -----------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~ 765 (905)
|+|||++.+..++.++|||||||++|||+||+.|+......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-- 238 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET-- 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH--
Confidence 8999999999999999999999999999999999975432111
Q ss_pred HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHH
Q 002581 766 LLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPP-MSRVVAM 822 (905)
Q Consensus 766 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPs-m~ev~~~ 822 (905)
........ ....-|..... ...+.+++..|++ +|.+||+ +.|+++.
T Consensus 239 ----~~~i~~~~--~~~~~p~~~~~----~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 ----YNKIINWK--ESLRFPPDPPV----SPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ----HHHHhccC--CcccCCCCCCC----CHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11111100 00101111111 2235566778997 9999999 9999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-19 Score=198.85 Aligned_cols=166 Identities=21% Similarity=0.268 Sum_probs=124.6
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|.. .+|+.||||+++... ....+.|.+|+.+++.++|+||+++++++.+.+..++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3677889999999999999995 468999999997432 223456889999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 8
Q ss_pred -------CCCChhhhc------cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 -------GYLAPEYAM------RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -------gY~APE~~~------~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||++. ...++.++|||||||++|||+||+.||......+ .............. |.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~--~~ 232 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQRFLKF--PE 232 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCCccCC--CC
Confidence 499999987 4678899999999999999999999997543211 11111111111110 11
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....+ ..+.+++..|++ +|.+||++.++++
T Consensus 233 ~~~~~----~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 233 DPKVS----SDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCC----HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11112 235556678887 9999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-19 Score=190.36 Aligned_cols=168 Identities=24% Similarity=0.413 Sum_probs=126.5
Q ss_pred HHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC-----
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA----- 712 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~----- 712 (905)
.++++|...+.||+|+||.||+|... +++.||+|++.... ...++|.+|+++++++ .|+||++++++|....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 46788999999999999999999964 57899999986443 2356799999999999 6999999999997644
Q ss_pred -eeEEEEc------------------------------------------------------------------------
Q 002581 713 -RRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 713 -~~~lv~e------------------------------------------------------------------------ 719 (905)
..++|+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 4788887
Q ss_pred ----------------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc
Q 002581 720 ----------------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ 778 (905)
Q Consensus 720 ----------------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 778 (905)
.|+|||++.. ..++.++|||||||+++||+||+.|+....... .+. ... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~----~~~-~~- 233 (275)
T cd06608 162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALF----KIP-RN- 233 (275)
T ss_pred ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHH----Hhh-cc-
Confidence 4999998754 357889999999999999999999986432211 111 111 11
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 779 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+.+. ........+.+++.+|++.||.+|||+.||++
T Consensus 234 ----~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 234 ----PPPTLK-SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----CCCCCC-chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 011111 11122345677888999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-19 Score=194.35 Aligned_cols=175 Identities=22% Similarity=0.338 Sum_probs=126.1
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
++|...+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++|+||+++++++...+..++|+|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56778899999999999999964 689999999864322 223467899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07844 85 LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEV 164 (291)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccc
Confidence
Q ss_pred ---CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---Cccccc------c---
Q 002581 720 ---GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQSLGL------V--- 783 (905)
Q Consensus 720 ---gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~------~--- 783 (905)
.|+|||+..+ ..++.++|||||||++|||++|+.|+....... ....-....... .....+ .
T Consensus 165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE--DQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence 3899999876 458999999999999999999999986543111 111111111100 000000 0
Q ss_pred -----CCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 784 -----DPTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 -----d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+ .... ....+.+++..|++.+|++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 243 FPFYPPRPLINHAPRLD--RIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccCChhHHHhCcCCC--CchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000 0000 1134667889999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-19 Score=199.35 Aligned_cols=109 Identities=22% Similarity=0.289 Sum_probs=95.2
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
..+|...+.||+|+||.||+|+.. +++.||+|+.... .+..|+.++++++|+|||++++++..+...++|+|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 456888999999999999999964 5788999985422 24579999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 139 ~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~g 218 (357)
T PHA03209 139 YSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG 218 (357)
T ss_pred cCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccc
Confidence
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCC
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSD 756 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~ 756 (905)
.|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 219 t~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 5999999999999999999999999999999766653
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.6e-19 Score=191.99 Aligned_cols=178 Identities=22% Similarity=0.383 Sum_probs=127.2
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ...+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4677889999999999999964 689999999975432 234678899999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (284)
T cd07836 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE 160 (284)
T ss_pred CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence
Q ss_pred ----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HHHHHHH----HhhcCccccccCCCCCC
Q 002581 720 ----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LLEWAWN----LHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~~~~~~----~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||++.+. .++.++|||||||++|||+||+.|+......+... +...... .+..-............
T Consensus 161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07836 161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPR 240 (284)
T ss_pred cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccC
Confidence 49999998764 57899999999999999999999987544322111 1100000 00000000000111110
Q ss_pred --------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 790 --------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 790 --------~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
........+.+++..|++.+|.+||++.||++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 241 YPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00112334667888999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=187.56 Aligned_cols=164 Identities=19% Similarity=0.330 Sum_probs=121.1
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-----cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--Cee
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-----HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARR 714 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~ 714 (905)
++|...++||+|+||.||+|.. .+|+.||||++.... ....+.|.+|++++.+++|+||++++|++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999995 458999999985321 12245788999999999999999999988764 456
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 67777
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||+..+..++.++|||||||++|||+||+.|+........ ....... ...+.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~-----~~~~~- 229 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQ-----PTNPV- 229 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHHhcC-----CCCCC-
Confidence 49999999988999999999999999999999999864321110 1111100 01111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+......+..+..+|+. +|.+||+++||++
T Consensus 230 --~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 230 --LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred --CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 122222345556667774 8999999999886
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-19 Score=193.74 Aligned_cols=162 Identities=22% Similarity=0.433 Sum_probs=128.8
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccc--cCcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSI--ASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~--~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e- 719 (905)
.|...+.||+||...|||+.-.+.+.+|+|++.. .+.+....|.+|+..|.+++ |.+||+|++|-..++..|||||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~ 441 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC 441 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence 3566788999999999999988888999998853 34445678999999999995 9999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 442 Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQ 521 (677)
T KOG0596|consen 442 GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQ 521 (677)
T ss_pred ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccc
Confidence
Q ss_pred ----CCCChhhhccC-----------CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccC
Q 002581 720 ----GYLAPEYAMRG-----------HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 ----gY~APE~~~~~-----------~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
-||+||.+... +++.++||||+||+||+|+-||.||... .-.|++ +..+.|
T Consensus 522 vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-------~n~~aK-------l~aI~~ 587 (677)
T KOG0596|consen 522 VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-------INQIAK-------LHAITD 587 (677)
T ss_pred cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-------HHHHHH-------HHhhcC
Confidence 59999988632 4678999999999999999999998632 112222 233555
Q ss_pred CCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 785 PTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 ~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
|.. ++.+.. .+++++|..|++.||.+|||..|+++
T Consensus 588 P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 588 PNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 533 222221 12778888999999999999999987
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-19 Score=195.74 Aligned_cols=156 Identities=21% Similarity=0.282 Sum_probs=118.9
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+.. +|+.||||+++... ....+.+..|..++... +|+||+++++++...+..++|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999964 68999999996432 23345678888888765 89999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
+|+|||++.+..++.++|||||||+++||+||+.|+...... .+.+ ....+ .+.+.... ...+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~----~~~~~------~~~~~~~~---~~~~~ 224 (316)
T cd05620 161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFE----SIRVD------TPHYPRWI---TKESK 224 (316)
T ss_pred CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhC------CCCCCCCC---CHHHH
Confidence 599999999999999999999999999999999999754321 1111 11111 12222211 12355
Q ss_pred HHHHHhccCCCCCCCCHH-HHH
Q 002581 800 GVALLCTQASPMMRPPMS-RVV 820 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~-ev~ 820 (905)
+++..|++.||++||++. ++.
T Consensus 225 ~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 225 DILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHccCCHHHcCCChHHHH
Confidence 677899999999999985 444
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.8e-19 Score=194.44 Aligned_cols=153 Identities=21% Similarity=0.257 Sum_probs=115.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHH-HHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIA-TISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
++||+|+||.||+|+. .+++.||||++.... .....++.+|.. +++.++|||||++++++...+..++|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999996 468999999986432 223445666665 5788999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP 160 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|+|||++.+..++.++|||||||++|||+||+.||...... .+. ..... +. ..+. ......+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~---~~i~~-~~------~~~~---~~~~~~~~ 224 (321)
T cd05603 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS---QMY---DNILH-KP------LQLP---GGKTVAAC 224 (321)
T ss_pred ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH---HHH---HHHhc-CC------CCCC---CCCCHHHH
Confidence 599999999999999999999999999999999998753211 111 11111 10 0111 11223467
Q ss_pred HHHHHhccCCCCCCCCHH
Q 002581 800 GVALLCTQASPMMRPPMS 817 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ 817 (905)
+++..|++.+|.+||+..
T Consensus 225 ~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 225 DLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHccCCHhhcCCCC
Confidence 788899999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.4e-19 Score=193.03 Aligned_cols=166 Identities=23% Similarity=0.409 Sum_probs=125.0
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.|+..+.||+|+||.||+|+. .+++.||||.+... .....++|.+|++++++++|+|++++++++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 355667899999999999995 46889999998632 22234578899999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (308)
T cd06634 96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175 (308)
T ss_pred ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCc
Confidence
Q ss_pred CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||++. .+.++.++|||||||++|||+||+.|+......+ +...... +.. +... ......
T Consensus 176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~~~-----~~~~--~~~~~~ 241 (308)
T cd06634 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQ-NES-----PALQ--SGHWSE 241 (308)
T ss_pred cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH------HHHHHhh-cCC-----CCcC--cccccH
Confidence 599999985 3578999999999999999999999986432111 1111111 110 1110 111223
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
.+.+++.+||+.+|.+||++.+|++.-
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 466788899999999999999999743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.4e-19 Score=196.33 Aligned_cols=157 Identities=19% Similarity=0.258 Sum_probs=120.6
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~ 718 (905)
+|...+.||+|+||+||+|+.. +++.||||++.... ....+.+..|..++..+ +|++|+++++++...+..++|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4677889999999999999854 57899999986432 22345678888888887 5899999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~ 160 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT 160 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence 8
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|||||++.+..++.++|||||||++|||+||+.||+..... .+...+ . ... ..++ ...
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~i---~-~~~------~~~p---~~~ 224 (323)
T cd05616 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSI---M-EHN------VAYP---KSM 224 (323)
T ss_pred CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHHH---H-hCC------CCCC---CcC
Confidence 499999999999999999999999999999999999754321 121111 1 111 0111 112
Q ss_pred HHHHHHHHHHhccCCCCCCCCH
Q 002581 795 ALRVIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm 816 (905)
...+.+++.+|++.+|.+|++.
T Consensus 225 s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 225 SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CHHHHHHHHHHcccCHHhcCCC
Confidence 2346678889999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.4e-19 Score=193.12 Aligned_cols=175 Identities=20% Similarity=0.298 Sum_probs=125.8
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcc-----cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQ-----GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
+|...+.||+|+||.||+|... +|+.||||++...... ....+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3666788999999999999954 6899999999654322 234578899999999999999999999998899999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT 160 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence 97
Q ss_pred ------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---------Ccccccc
Q 002581 720 ------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---------NQSLGLV 783 (905)
Q Consensus 720 ------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~ 783 (905)
.|+|||++.+ ..++.++|||||||+++||+||+.|+......+ ...-....... .......
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH---HHHHHHHHcCCCchhhhhhcccccccc
Confidence 3999999865 467999999999999999999977776433211 11111110000 0000000
Q ss_pred C------CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 784 D------PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 d------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. .............+.+++.+|++.+|++|||+.||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0 0000111122345778899999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-19 Score=193.90 Aligned_cols=177 Identities=21% Similarity=0.249 Sum_probs=125.7
Q ss_pred CCCCCccccccceeEEEEEeC---CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS---DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLL 716 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~---~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~l 716 (905)
|...+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++.+++||||++++++|... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 666788999999999999964 47899999997532 33346788999999999999999999999987 77888
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~ 161 (316)
T cd07842 82 LFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161 (316)
T ss_pred EEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence 887
Q ss_pred ------------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccch-------hhHHHHHHHH
Q 002581 720 ------------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEK-------IYLLEWAWNL 773 (905)
Q Consensus 720 ------------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~-------~~l~~~~~~~ 773 (905)
.|+|||++.+. .++.++|||||||+++||+||+.|+........ ..+...+..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (316)
T cd07842 162 FNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVL 241 (316)
T ss_pred cCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHh
Confidence 28999988764 589999999999999999999999875433220 1111111110
Q ss_pred hhcC-----------cccc----ccCCCCC-CCCH-------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 774 HENN-----------QSLG----LVDPTLT-EFND-------KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 774 ~~~~-----------~~~~----~~d~~l~-~~~~-------~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... .... ....... .... .....+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 242 GTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred CCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000 0000001 0000 12235778899999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.3e-19 Score=194.51 Aligned_cols=109 Identities=27% Similarity=0.430 Sum_probs=90.0
Q ss_pred CCccccccceeEEEEEeC---CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEe--CCeeEEEEc---
Q 002581 648 SNKLGEGGYGPVYKGTLS---DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE--GARRLLVYD--- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~--~~~~~lv~e--- 719 (905)
..+||+|+||+||+|+.. ++..||||.+.... ....+.+|++++++++|||||++++++.. ....++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 468999999999999964 35789999986432 23568899999999999999999998854 344566665
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence
Q ss_pred ----------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ----------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ----------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
+|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 4999999876 45899999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-19 Score=196.45 Aligned_cols=163 Identities=23% Similarity=0.429 Sum_probs=125.4
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEccccCccc---HHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQG---KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||.|+||.||-|. ..+.++||||++.....+. ..+.+.||..|.+++|||+|...|||......+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445679999999999999 4567899999997665443 4578999999999999999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 6
Q ss_pred CCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 721 YLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 721 Y~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
|||||++. .|.|+-|+||||+||+..||.-+|+|...+.... -.+...++ -.|.+... +=...
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS------ALYHIAQN------esPtLqs~--eWS~~ 253 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQN------ESPTLQSN--EWSDY 253 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH------HHHHHHhc------CCCCCCCc--hhHHH
Confidence 99999875 5899999999999999999999999976543211 11111111 12344211 11223
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+..+.-.|+++-|.+|||..++++
T Consensus 254 F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 254 FRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHHHHHhhCcccCCcHHHHhh
Confidence 555667999999999999887664
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=197.63 Aligned_cols=169 Identities=18% Similarity=0.213 Sum_probs=126.2
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
..++|...+.||+|+||.||+|+. .+++.||||++... .....+.|.+|+++++.++|||||++++++..+...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 456788889999999999999995 46899999999642 12234558899999999999999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~ 200 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC 200 (370)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence 998
Q ss_pred -------CCCChhhhccC----CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 -------GYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 -------gY~APE~~~~~----~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|||||.+.+. .++.++|||||||++|||+||+.||......+ . ......... .+..|.-.
T Consensus 201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~---~~~i~~~~~--~~~~~~~~ 272 (370)
T cd05596 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---T---YSKIMDHKN--SLTFPDDI 272 (370)
T ss_pred CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---H---HHHHHcCCC--cCCCCCcC
Confidence 49999998753 48899999999999999999999997543211 1 111111100 01011111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 002581 789 EFNDKEALRVIGVALLCTQASPMM--RPPMSRVVA 821 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~--RPsm~ev~~ 821 (905)
.. ...+.+++..|++.+|.+ ||++.|+++
T Consensus 273 ~~----s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 273 EI----SKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CC----CHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 11 223566778999999988 999999876
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.77 E-value=5e-19 Score=196.65 Aligned_cols=157 Identities=20% Similarity=0.272 Sum_probs=120.4
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCC-CcceEEeEEEeCCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHR-NLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~-niv~l~g~~~~~~~~~lv~ 718 (905)
+|...+.||+|+||.||+|+.. +++.||||++... .....+.+..|++++..++|+ +|+++.+++...+..++|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4667889999999999999954 5789999999643 223456789999999999765 6888999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT 160 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence 8
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
+|+|||++.+..++.++|||||||++|||+||+.||......+ +...+ ... .+.++.. .
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~i----~~~------~~~~~~~---~ 224 (324)
T cd05587 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQSI----MEH------NVSYPKS---L 224 (324)
T ss_pred ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHH----HcC------CCCCCCC---C
Confidence 5999999999999999999999999999999999997543211 11111 111 0111111 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCH
Q 002581 795 ALRVIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm 816 (905)
...+.+++.+|++.+|.+|++.
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 225 SKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CHHHHHHHHHHhhcCHHHcCCC
Confidence 2246677889999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=201.01 Aligned_cols=109 Identities=22% Similarity=0.218 Sum_probs=96.8
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
..+|...+.||+|+||.||+|... .++.||||... ...+.+|+++|++++|+|||++++++..++..++|+|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 456888899999999999999965 57899999643 2346789999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCC
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSD 756 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~ 756 (905)
.|||||++.+..++.++|||||||++|||++|+.|+.
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 5999999999999999999999999999999987654
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=185.29 Aligned_cols=165 Identities=26% Similarity=0.482 Sum_probs=128.3
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
+|...+.||+|+||.||++... +++.||+|++........+.+.+|++.+++++|+|++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3666789999999999999975 689999999976544456789999999999999999999999998888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 160 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT 160 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++....++.++||||||++++||+||+.|+......+. ...... ..... +.. .......+
T Consensus 161 ~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~-----~~~-~~~~~~~~ 227 (253)
T cd05122 161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA------LFKIAT-NGPPG-----LRN-PEKWSDEF 227 (253)
T ss_pred CcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH------HHHHHh-cCCCC-----cCc-ccccCHHH
Confidence 49999999998999999999999999999999999874322111 111110 11111 110 00012346
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++..|++.+|++|||+.||++
T Consensus 228 ~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 228 KDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHccCChhhCCCHHHHhc
Confidence 77888999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-18 Score=194.15 Aligned_cols=166 Identities=22% Similarity=0.260 Sum_probs=122.4
Q ss_pred CCCCCCccccccceeEEEEEe----CCCcEEEEEEccccC----cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCee
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLSIAS----HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~ 714 (905)
+|...+.||+|+||+||+++. .+++.||||++.... ....+.+.+|++++.++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 466778999999999999874 357899999986421 22345688999999999 599999999999999999
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 99998
Q ss_pred ----------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ----------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
+|||||++.+. .++.++|||||||+++||+||+.|+........ ...+...... .++.+.
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~~~~~~~~------~~~~~~ 231 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT---QSEVSRRILK------CDPPFP 231 (332)
T ss_pred CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC---HHHHHHHHhc------CCCCCC
Confidence 59999999865 488999999999999999999999864322111 1111111111 122222
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
... ...+.+++.+|++.||++|| ++.++++
T Consensus 232 ~~~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 232 SFI---GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCC---CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 211 12356677899999999999 5666664
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-19 Score=193.78 Aligned_cols=179 Identities=16% Similarity=0.245 Sum_probs=123.9
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-------
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------- 712 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------- 712 (905)
++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||++++++|....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 4688889999999999999995 468999999986432 222345778999999999999999999987654
Q ss_pred -eeEEEEc------------------------------------------------------------------------
Q 002581 713 -RRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 713 -~~~lv~e------------------------------------------------------------------------ 719 (905)
..++|+|
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSL 171 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccC
Confidence 3488887
Q ss_pred ----------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccc--
Q 002581 720 ----------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL-- 780 (905)
Q Consensus 720 ----------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-- 780 (905)
.|+|||+..+. .++.++|||||||+++||+||+.|+..............+..........
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
T cd07865 172 SKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGV 251 (310)
T ss_pred CcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc
Confidence 29999998765 47899999999999999999999987543322222222111100000000
Q ss_pred ---cccCC-CCCCC----CH------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 ---GLVDP-TLTEF----ND------KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ---~~~d~-~l~~~----~~------~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+..+. .+... .. .+...+.+++..|++.+|.+|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 252 DKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000 00000 00 01234567899999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-18 Score=191.66 Aligned_cols=109 Identities=28% Similarity=0.442 Sum_probs=89.6
Q ss_pred CCccccccceeEEEEEeC---CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEe--CCeeEEEEc---
Q 002581 648 SNKLGEGGYGPVYKGTLS---DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE--GARRLLVYD--- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~--~~~~~lv~e--- 719 (905)
.++||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++|||||++++++.. +...++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 568999999999999854 46789999986432 23568899999999999999999998754 234455554
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence
Q ss_pred ----------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ----------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ----------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
.|||||++.+. .++.++||||+||+++||+||+.||...
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 49999999874 5899999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=183.38 Aligned_cols=165 Identities=21% Similarity=0.391 Sum_probs=128.6
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv~ 718 (905)
+|+..+.||+|++|.||+|... +++.||||++..... ...+.+.+|++++++++|+||+++++++... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999965 689999999865432 3467899999999999999999999999988 8889998
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 7
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||+..+...+.++||||||++++||++|+.|+..... . ..-+......+. ....+.
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~----~~~~~~~~~~~~--------~~~~~~ 227 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-P----MAALYKIGSSGE--------PPEIPE 227 (260)
T ss_pred cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-h----HHHHHhccccCC--------CcCCCc
Confidence 48999999999999999999999999999999999875431 1 111111110000 011111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+.+++.+|++.+|++||++.|+++
T Consensus 228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 228 HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 22345777888999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-19 Score=209.06 Aligned_cols=185 Identities=19% Similarity=0.211 Sum_probs=125.9
Q ss_pred HHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCC------CcceEEeEE
Q 002581 636 AELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHR------NLVRLYGCC 708 (905)
Q Consensus 636 ~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~------niv~l~g~~ 708 (905)
+++...+++|...++||+|+||+||+|.. .+++.||||+++... ...+++..|++++.+++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 34445678899999999999999999985 458899999996422 2334567788877777654 588898887
Q ss_pred EeC-CeeEEEEc--------------------------------------------------------------------
Q 002581 709 IEG-ARRLLVYD-------------------------------------------------------------------- 719 (905)
Q Consensus 709 ~~~-~~~~lv~e-------------------------------------------------------------------- 719 (905)
... ...++|+|
T Consensus 201 ~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 201 QNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred EcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 654 35566655
Q ss_pred -----------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHH--
Q 002581 720 -----------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLE-- 768 (905)
Q Consensus 720 -----------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~-- 768 (905)
+|||||++.+..++.++|||||||++|||+||+.||+.....+....+.
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 360 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT 360 (467)
T ss_pred CCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 3999999999999999999999999999999999998654332222221
Q ss_pred -------HHHH--------Hhhc-CccccccCCCC-----CCCC-H--HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 769 -------WAWN--------LHEN-NQSLGLVDPTL-----TEFN-D--KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 769 -------~~~~--------~~~~-~~~~~~~d~~l-----~~~~-~--~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
|... .+.. +......++.. .... . ..-..+.+++..|++.||++|||+.|+++
T Consensus 361 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 361 LGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred cCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 1110 0000 00000111100 0000 0 01134668899999999999999999996
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-19 Score=177.60 Aligned_cols=164 Identities=24% Similarity=0.367 Sum_probs=131.3
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.++|...+.||+|.||.||.|+. .++-.||+|++... ..+-..++.+|+++-+.++||||.+++||+.+..+.||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 35788999999999999999995 46789999999543 122356799999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
.|
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~ 180 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK 180 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce
Confidence 98
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
-|.+||...+..++.++|+|+.||+.+|++.|.+||+.....+ .++.+. ..++.+| ...
T Consensus 181 tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-------tYkrI~---k~~~~~p---~~i-- 245 (281)
T KOG0580|consen 181 TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-------TYKRIR---KVDLKFP---STI-- 245 (281)
T ss_pred eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-------HHHHHH---HccccCC---ccc--
Confidence 4999999999999999999999999999999999998654221 111111 1122333 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+.+++..|+..+|.+|.+..||+.
T Consensus 246 -s~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 246 -SGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -ChhHHHHHHHHhccCccccccHHHHhh
Confidence 123556778999999999999999986
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=195.41 Aligned_cols=166 Identities=18% Similarity=0.266 Sum_probs=123.1
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...++||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++..++|+|||++++++..++..++|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4678889999999999999995 468999999996432 223456889999999999999999999999999999999
Q ss_pred c----------------------------------------------------------------C--------------
Q 002581 719 D----------------------------------------------------------------G-------------- 720 (905)
Q Consensus 719 e----------------------------------------------------------------g-------------- 720 (905)
| |
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 8 1
Q ss_pred --------------------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCCCCCC
Q 002581 721 --------------------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSD 756 (905)
Q Consensus 721 --------------------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~ 756 (905)
|||||++....++.++|||||||+++||+||+.||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 899999999999999999999999999999999997
Q ss_pred CCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 002581 757 NSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPP---MSRVVA 821 (905)
Q Consensus 757 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPs---m~ev~~ 821 (905)
.....+ .... ...... ...-+.-...+ + .+.+++..|+. +|.+|++ +.|+++
T Consensus 241 ~~~~~~---~~~~---i~~~~~--~~~~~~~~~~s-~---~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 241 SDNPQE---TYRK---IINWKE--TLQFPDEVPLS-P---EAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCHHH---HHHH---HHcCCC--ccCCCCCCCCC-H---HHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 543221 1111 111000 00001101112 2 24445556775 8999998 887765
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-19 Score=199.16 Aligned_cols=173 Identities=23% Similarity=0.405 Sum_probs=125.6
Q ss_pred hcCCCCCCccccccceeEEEEEe------CCCcEEEEEEccccC-cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCC-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA- 712 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~- 712 (905)
.++|...+.||+|+||+||+|.. .+++.||||+++... ....+.+.+|++++.++ +|+|||+++|+|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45688899999999999999973 347899999997533 22346789999999999 6899999999886432
Q ss_pred eeEEEE--------------------------------------------------------------------------
Q 002581 713 RRLLVY-------------------------------------------------------------------------- 718 (905)
Q Consensus 713 ~~~lv~-------------------------------------------------------------------------- 718 (905)
..++|+
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 222221
Q ss_pred -----------c--------------------------------------------------------------------
Q 002581 719 -----------D-------------------------------------------------------------------- 719 (905)
Q Consensus 719 -----------e-------------------------------------------------------------------- 719 (905)
+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 0
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++.+..++.++|||||||++|||++ |..|+......+. .......+.. +..+... ...+
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~-----~~~~~~~---~~~~ 311 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTR-----MRAPDYT---TPEM 311 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH------HHHHHhccCC-----CCCCCCC---CHHH
Confidence 2999999999999999999999999999997 8888764322111 1111111111 1111111 1247
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 799 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
.+++..||+.+|.+||||.||++.|+...+
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 788899999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=206.08 Aligned_cols=242 Identities=24% Similarity=0.269 Sum_probs=191.3
Q ss_pred eeEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEec
Q 002581 52 CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131 (905)
Q Consensus 52 ~~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~L 131 (905)
.+++.|.+..|+++. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+ .+|..+ ++|+.|+|
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~L 289 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWI 289 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEEC
Confidence 478999999999885 554 2578999999999998 45653 468999999999998 456533 57889999
Q ss_pred ccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCC
Q 002581 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP 211 (905)
Q Consensus 132 s~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~ 211 (905)
++|+++ .+|.. +++|+.|+|++|++++ +|... .+|+.|++++|++++ +|.. ..+|+.|+|++|++++
T Consensus 290 s~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 290 FGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS- 356 (788)
T ss_pred cCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-
Confidence 999998 56753 4789999999999986 45432 457888999999984 6642 2589999999999984
Q ss_pred CCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCC
Q 002581 212 IPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNI 291 (905)
Q Consensus 212 ~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l 291 (905)
+|.. ..+|+.|++++|.+...+ . ...+|+.|+|++|.+++ +|.. .++|+.|++++|++++ +|...
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~~LP-~---l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~--- 421 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLTSLP-A---LPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP--- 421 (788)
T ss_pred CCCC---CcccceehhhccccccCc-c---cccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---
Confidence 6653 356788899998876432 2 23579999999999985 6643 3689999999999984 77643
Q ss_pred CCCCEEECcCCcCccCCCCCC--CCCCCEEEeecCCCCCCCCccc
Q 002581 292 DSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWV 334 (905)
Q Consensus 292 ~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N~lsg~ip~~~ 334 (905)
.+|+.|+|++|+|+ .+|..+ +.+|+.|+|++|+|+|.+|..+
T Consensus 422 ~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 422 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 57889999999998 688755 4789999999999999887654
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.8e-19 Score=197.81 Aligned_cols=178 Identities=19% Similarity=0.240 Sum_probs=123.7
Q ss_pred HHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC-----
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG----- 711 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~----- 711 (905)
...++|...+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++|+|||++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3456788889999999999999984 568899999986432 22345688999999999999999999987543
Q ss_pred -CeeEEEEc-----------------------------------------------------------------------
Q 002581 712 -ARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 712 -~~~~lv~e----------------------------------------------------------------------- 719 (905)
...+++++
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 23466665
Q ss_pred --------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc-----------Ccc
Q 002581 720 --------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN-----------NQS 779 (905)
Q Consensus 720 --------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~~~ 779 (905)
.|+|||++.+ ..++.++|||||||+++||++|+.||......+. +..+. ..... ...
T Consensus 172 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIM-EVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHhCCCCHHHHHhcchhhH
Confidence 5999999877 5789999999999999999999999865322111 11111 00000 000
Q ss_pred ccccCCCCCCCCH--------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVDPTLTEFND--------KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d~~l~~~~~--------~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+ ..+...+. .....+.+++.+|++.||.+|||+.|+++
T Consensus 249 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 249 RKYI-QSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHh-hccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00000000 01123567888999999999999999986
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-18 Score=187.15 Aligned_cols=175 Identities=21% Similarity=0.286 Sum_probs=123.3
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhC---CCCCcceEEeEEEeCCe-----
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAV---QHRNLVRLYGCCIEGAR----- 713 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~---~H~niv~l~g~~~~~~~----- 713 (905)
|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++.++ +|+||++++++|...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456788999999999999976 489999999964322 2234677888877666 59999999999988776
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++++|
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 788876
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc---------c
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS---------L 780 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~---------~ 780 (905)
.|+|||++.+..++.|+|||||||+++||+||+.|+......+ .+..+.......... .
T Consensus 161 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 161 MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHHHHHcCCCChHhcCCCcccch
Confidence 3899999999999999999999999999999998887543221 111111111000000 0
Q ss_pred cccCCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 GLVDPTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~~~d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
....... .....+....+.+++..||+.||++||+|.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000 0111122345677889999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.2e-19 Score=192.22 Aligned_cols=179 Identities=21% Similarity=0.287 Sum_probs=127.3
Q ss_pred HHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC----
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA---- 712 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~---- 712 (905)
.+.++|+..+.||+|+||.||+|... +|+.||||+++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678888999999999999999965 58999999996432 223456889999999999999999999987654
Q ss_pred ------eeEEEEc-------------------------------------------------------------------
Q 002581 713 ------RRLLVYD------------------------------------------------------------------- 719 (905)
Q Consensus 713 ------~~~lv~e------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccc
Confidence 6788886
Q ss_pred ------------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC---
Q 002581 720 ------------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN--- 777 (905)
Q Consensus 720 ------------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~--- 777 (905)
.|+|||.+.+ ..++.++|||||||+++||++|+.|+......+ .+ .-+.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 240 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--QL-ELISRLCGSPCPA 240 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--HH-HHHHHHhCCCChh
Confidence 3899998865 457899999999999999999999987533211 11 1111111100
Q ss_pred ccccc--------cCC------CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 778 QSLGL--------VDP------TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 ~~~~~--------~d~------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...++ .|+ .+..........+.+++..|++.+|.+||++.+|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000 000000012345778889999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-18 Score=188.36 Aligned_cols=174 Identities=18% Similarity=0.257 Sum_probs=124.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC-cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeC--CeeEEEEc
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEG--ARRLLVYD 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~--~~~~lv~e 719 (905)
|...+.||+|+||.||+|+. .+++.||||+++... ......+.+|+.++.++. |+||++++++|.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 34567899999999999995 468999999986532 223345668999999995 99999999999987 78899987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~ 160 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYIS 160 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCC
Confidence
Q ss_pred --CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh-----------cCccccccCC
Q 002581 720 --GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE-----------NNQSLGLVDP 785 (905)
Q Consensus 720 --gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~d~ 785 (905)
.|+|||++.. +.++.++|||||||++|||+||+.|+...... ..+.+...... .........+
T Consensus 161 ~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07831 161 TRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP 237 (282)
T ss_pred CcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence 3999998754 56799999999999999999999998654322 22222222111 0000011011
Q ss_pred CC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TL-----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. ..........+.+++.+|++.+|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 10 0001123456788999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.2e-19 Score=191.77 Aligned_cols=175 Identities=19% Similarity=0.293 Sum_probs=124.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|+||+++++++.+....++|+|
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 56678899999999999996 468999999986432 2224568899999999999999999999999889999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 161 (284)
T cd07839 82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVV 161 (284)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCcc
Confidence
Q ss_pred --CCCChhhhccCC-CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc------cccccCC----C
Q 002581 720 --GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ------SLGLVDP----T 786 (905)
Q Consensus 720 --gY~APE~~~~~~-~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~d~----~ 786 (905)
.|+|||++.+.. ++.++|||||||+++||+||+.|+......+ ...+.......... ..+..+. .
T Consensus 162 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 162 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 499999987754 7999999999999999999999965433211 11111111110000 0000000 0
Q ss_pred CC------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LT------EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~------~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .........+.+++..|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 000112234667888999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-18 Score=191.93 Aligned_cols=171 Identities=20% Similarity=0.333 Sum_probs=122.7
Q ss_pred Cccccc--cceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEG--GYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G--~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
..||+| +||+||+++. .+|+.||||++.... ....+.|.+|+.+++.++|+|||+++++|..++..++|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 9999999995 579999999986432 2234678999999999999999999999999988888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence
Q ss_pred ---------CCCChhhhccC--CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH----------------
Q 002581 720 ---------GYLAPEYAMRG--HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN---------------- 772 (905)
Q Consensus 720 ---------gY~APE~~~~~--~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~---------------- 772 (905)
.|||||++.+. .++.++|||||||+++||++|+.|+......+. +......
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccccchhhh
Confidence 29999999764 578999999999999999999999875432211 1111000
Q ss_pred Hh-------hcC---------ccccccCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 773 LH-------ENN---------QSLGLVDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 773 ~~-------~~~---------~~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. ..+ ....+.+..+. .........+.+++.+|++.||++|||+.||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 000 00000111111 111234456788999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=193.17 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=66.1
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||++.. .+++.||||++.... ....+.+.+|++++.+++|||||++++++.+....++|+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3677889999999999999984 578999999986432 223457889999999999999999999999999999999
Q ss_pred c
Q 002581 719 D 719 (905)
Q Consensus 719 e 719 (905)
|
T Consensus 81 E 81 (377)
T cd05629 81 E 81 (377)
T ss_pred e
Confidence 8
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=188.34 Aligned_cols=166 Identities=23% Similarity=0.355 Sum_probs=122.2
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC-cccHHHHHHHHHH-HhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS-HQGKNQFVNEIAT-ISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~-l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||.||+|+.. +|+.||||+++... .....++..|+.. ++..+|+|||++++++...+..++|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36778889999999999999964 69999999986542 2234567777775 566789999999999998888889887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence
Q ss_pred -------CCCChhhhcc----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 -------GYLAPEYAMR----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 -------gY~APE~~~~----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||++.+ ..++.++|||||||++|||+||+.|+...... ...+. .... ...+.+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~----~~~~------~~~~~~~ 229 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLK----QVVE------EPSPQLP 229 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHH----HHHh------cCCCCCC
Confidence 4999998865 45689999999999999999999998642211 01111 1111 0111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. ......+.+++..|++.+|++||++.||++
T Consensus 230 ~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 A--EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred c--cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011234677888999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.2e-19 Score=192.70 Aligned_cols=168 Identities=22% Similarity=0.391 Sum_probs=125.5
Q ss_pred cCCCCCCccccccceeEEEEEeCC-CcEEEEEEccccC-cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e 719 (905)
++|...+.||+|+||.||+|...+ ++.||||++.... .....++.+|++++.+.+ |+||++++|+|......++|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 456778999999999999999764 8999999996432 233456888888887775 9999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 95 ~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06618 95 LMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRS 174 (296)
T ss_pred ccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCC
Confidence
Q ss_pred ----CCCChhhhccCC----CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 ----GYLAPEYAMRGH----LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 ----gY~APE~~~~~~----~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|+|||++.+.. ++.++|||||||++|||+||+.|+....... ... ....... . +.+.. .
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~---~~~~~~~-~-----~~~~~-~ 242 (296)
T cd06618 175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF--EVL---TKILQEE-P-----PSLPP-N 242 (296)
T ss_pred CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH--HHH---HHHhcCC-C-----CCCCC-C
Confidence 499999987654 8999999999999999999999986432111 111 1111111 0 11110 0
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.....++.+++.+|++.+|.+||++.++++.
T Consensus 243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 243 EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0122346778889999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-19 Score=193.49 Aligned_cols=169 Identities=16% Similarity=0.221 Sum_probs=130.1
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||++... +++.||||.+.... ....+.+.+|+++++.++|+||+++++++..++..++|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36778899999999999999954 57899999986442 223457889999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 8
Q ss_pred --------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 --------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 --------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
+|+|||++....++.++|||||||++|||+||+.|+...... ++...... +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~~~-~-- 231 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQVIS-D-- 231 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-c--
Confidence 189999999889999999999999999999999998643221 11111111 1
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 780 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
....+.... .....+.+++.+|++.+|++||++.++.+.|+
T Consensus 232 -~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 232 -DIEWPEGDE---ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred -ccCCCCccc---cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 111111111 12234677888999999999999888887776
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=186.44 Aligned_cols=163 Identities=25% Similarity=0.391 Sum_probs=128.7
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+++. .+++.+|||++.... .....++.+|++++++++|+||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 366788999999999999984 468899999986432 3345678999999999999999999999999899999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+..+..++.++||||||+++|||++|+.|+......+ +... ...+. ....+...
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~----~~~~~--------~~~~~~~~ 225 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRYK----VQRGK--------YPPIPPIY 225 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH----HhcCC--------CCCCchhh
Confidence 5999999999999999999999999999999999987543211 1111 11111 11122233
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...+..++..|++.+|++||++.|+++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 226 SQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 445778889999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-19 Score=188.82 Aligned_cols=166 Identities=22% Similarity=0.414 Sum_probs=124.5
Q ss_pred CCCccccccceeEEEEEeC-CCcEEEEEEccccCccc--HHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 647 PSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 647 ~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
..+.||+|+||+||+++.. +++.||+|++....... .....+|+.++++++|+||+++++++......++|+|
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence 4578999999999999965 56789999997654332 2235669999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 162 (260)
T PF00069_consen 83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTP 162 (260)
T ss_dssp EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred CCCChhhhc-cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAM-RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~-~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||++. +..++.++||||+|++++||++|+.|+......+........ .... . ..... ........+
T Consensus 163 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~---~~~~----~-~~~~~-~~~~~~~~l 233 (260)
T PF00069_consen 163 EYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKI---LKRP----L-PSSSQ-QSREKSEEL 233 (260)
T ss_dssp GGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHH---HHTH----H-HHHTT-SHTTSHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc---cccc----c-ccccc-ccchhHHHH
Confidence 599999998 889999999999999999999999998865211211111111 1000 0 00000 000011457
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+++..|++.||++||+|.++++
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 78888999999999999999986
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.6e-19 Score=190.68 Aligned_cols=175 Identities=20% Similarity=0.266 Sum_probs=126.8
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|.. .+|+.||||++.... ....+.|.+|+.++++++|+||+++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 356678899999999999995 468999999996543 2335679999999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (286)
T cd07832 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ 160 (286)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence
Q ss_pred ----CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc------------cccc
Q 002581 720 ----GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ------------SLGL 782 (905)
Q Consensus 720 ----gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~ 782 (905)
.|+|||++.+. .++.++||||+||+++||+||++|+...... ....++........ ...+
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 48999998754 4689999999999999999997777543321 11122211111000 0000
Q ss_pred cCCCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 VDPTL-----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+.- .+...+....+.+++.+|++.+|.+|||+++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000 0000112355778889999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-18 Score=197.62 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=124.5
Q ss_pred cCCCCCCccccccceeEEEEEeC---CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS---DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
..|...+.||+|+||.||+|... .+..||||.+... +.+.+|++++++++|+|||++++++......++|+|
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 45778899999999999999753 3578999998532 345689999999999999999999998888999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 167 ~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~ 246 (392)
T PHA03207 167 KYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYG 246 (392)
T ss_pred hcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccc
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc----------------
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ---------------- 778 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------- 778 (905)
.|+|||++.+..++.++|||||||++|||+||+.|+.............-+........
T Consensus 247 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 326 (392)
T PHA03207 247 WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFK 326 (392)
T ss_pred cccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHH
Confidence 59999999999999999999999999999999999875432211111111111111000
Q ss_pred -cccccCCCC--CCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 779 -SLGLVDPTL--TEFN--DKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 779 -~~~~~d~~l--~~~~--~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
......+.. .... ......+..++.+|+..||.+|||+.|++..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 327 QYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000001100 0000 0011235567789999999999999999873
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.76 E-value=7e-19 Score=196.65 Aligned_cols=181 Identities=18% Similarity=0.244 Sum_probs=126.2
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----e
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----R 713 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~ 713 (905)
.+.|...+.||+|+||+||+|+. .+++.||||++... ......++.+|+.++++++|+||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45688889999999999999994 56899999998643 2233456889999999999999999999886543 4
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence 688876
Q ss_pred ---------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhH-HHHHH-------HHhhcCccc-
Q 002581 720 ---------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYL-LEWAW-------NLHENNQSL- 780 (905)
Q Consensus 720 ---------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l-~~~~~-------~~~~~~~~~- 780 (905)
.|+|||++.. ..++.++|||||||+++||++|+.|+......+.... ..... .........
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07858 164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARR 243 (337)
T ss_pred cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhH
Confidence 3999998875 5689999999999999999999999865322111110 00000 000000000
Q ss_pred ------cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 781 ------GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 781 ------~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...++......+.....+.+++.+|++.+|++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 244 YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000111111111233457788999999999999999999974
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-19 Score=189.24 Aligned_cols=164 Identities=21% Similarity=0.263 Sum_probs=126.9
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
+|...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4667789999999999999965 58999999996432 2345689999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 160 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||+..+..++.++||||||++++||+||+.|+....... ..+....... ..+.. +.....
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~------~~~~~---~~~~~~ 227 (258)
T cd05578 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET------ADVLY---PATWST 227 (258)
T ss_pred CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc------ccccC---cccCcH
Confidence 4899999999899999999999999999999999987543221 1122111111 00111 111224
Q ss_pred HHHHHHHHhccCCCCCCCCH--HHHH
Q 002581 797 RVIGVALLCTQASPMMRPPM--SRVV 820 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm--~ev~ 820 (905)
.+.+++.+||+.+|.+||++ +|+.
T Consensus 228 ~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 228 EAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHHHHccCChhHcCCccHHHHh
Confidence 56778889999999999999 5544
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-18 Score=194.69 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=65.6
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.|...++||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|+|||++++++.+.+..++|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 477788999999999999995 568899999996432 2234578999999999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-18 Score=190.27 Aligned_cols=163 Identities=25% Similarity=0.464 Sum_probs=123.2
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||+|+||+||+|+. .+|+.||||++..... ...+++.+|++++++++|+|+++++++|.+....++|+|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 44457799999999999995 4689999999864322 233568899999999999999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 182 (313)
T cd06633 103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPY 182 (313)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcccccc
Confidence 4
Q ss_pred CCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 721 YLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 721 Y~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
|+|||++. .+.++.++|||||||++|||++|+.|+....... . +....... . +... .......
T Consensus 183 y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~---~---~~~~~~~~-~-----~~~~--~~~~~~~ 248 (313)
T cd06633 183 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---A---LYHIAQND-S-----PTLQ--SNEWTDS 248 (313)
T ss_pred ccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH---H---HHHHHhcC-C-----CCCC--ccccCHH
Confidence 99999984 4678999999999999999999999986532211 1 11111111 0 1110 0011123
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.+++.+|++.+|.+||++.+++.
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 666788999999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-18 Score=193.64 Aligned_cols=117 Identities=23% Similarity=0.363 Sum_probs=102.5
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|.. .+++.||||++.... ......+.+|++++.+++|+|||++++++.+....++|+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4678889999999999999985 468999999996432 223456889999999999999999999999999999999
Q ss_pred c----------------------------------------------------------------C--------------
Q 002581 719 D----------------------------------------------------------------G-------------- 720 (905)
Q Consensus 719 e----------------------------------------------------------------g-------------- 720 (905)
| |
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 8 1
Q ss_pred -----------------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCC
Q 002581 721 -----------------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSL 759 (905)
Q Consensus 721 -----------------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~ 759 (905)
|||||++.+..++.++|||||||++|||+||+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 899999999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-18 Score=188.53 Aligned_cols=179 Identities=17% Similarity=0.282 Sum_probs=125.6
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~lv 717 (905)
++|...+.||+|+||.||+|... +++.||||.++.... .....+.+|++++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46777899999999999999965 588999999964322 2234678999999999999999999999877 788999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 164 (293)
T cd07843 85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYT 164 (293)
T ss_pred ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccc
Confidence 87
Q ss_pred ------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HHH---------HHHH-Hhh---cCc
Q 002581 720 ------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LLE---------WAWN-LHE---NNQ 778 (905)
Q Consensus 720 ------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~~---------~~~~-~~~---~~~ 778 (905)
.|+|||++.+. .++.++|||||||+++||+||+.|+......+... +.. |... .+. ...
T Consensus 165 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (293)
T cd07843 165 QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKT 244 (293)
T ss_pred cccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccc
Confidence 49999998764 46899999999999999999999987543221110 000 1000 000 000
Q ss_pred cccccCCCCC-CCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 779 SLGLVDPTLT-EFNDK-EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 779 ~~~~~d~~l~-~~~~~-~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
........+. .++.. ....+.+++..|++.+|++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 245 FTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000110 01111 1334667888999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-18 Score=188.05 Aligned_cols=160 Identities=24% Similarity=0.413 Sum_probs=124.7
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--------
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-------- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-------- 719 (905)
.+||+|+||.||+|.. .+++.||||++........+.|.+|+.++++++|+||+++++++..++..++|+|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999986 5789999999865444456679999999999999999999999999999999998
Q ss_pred ---------------------------------------------------------------------------CCCCh
Q 002581 720 ---------------------------------------------------------------------------GYLAP 724 (905)
Q Consensus 720 ---------------------------------------------------------------------------gY~AP 724 (905)
+|+||
T Consensus 106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~p 185 (292)
T cd06657 106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 185 (292)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCH
Confidence 49999
Q ss_pred hhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH
Q 002581 725 EYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALL 804 (905)
Q Consensus 725 E~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~ 804 (905)
|+..+..++.++|||||||+++||+||+.|+......+ ....+... +.+.+... ......+.+++.+
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~---~~~~~~~~---------~~~~~~~~-~~~~~~l~~li~~ 252 (292)
T cd06657 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AMKMIRDN---------LPPKLKNL-HKVSPSLKGFLDR 252 (292)
T ss_pred HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhh---------CCcccCCc-ccCCHHHHHHHHH
Confidence 99988899999999999999999999999986432211 11111111 11111110 1112235667789
Q ss_pred hccCCCCCCCCHHHHHH
Q 002581 805 CTQASPMMRPPMSRVVA 821 (905)
Q Consensus 805 C~~~~P~~RPsm~ev~~ 821 (905)
|++.+|.+||++.+|++
T Consensus 253 ~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 253 LLVRDPAQRATAAELLK 269 (292)
T ss_pred HHhCCcccCcCHHHHhc
Confidence 99999999999999887
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-18 Score=190.20 Aligned_cols=177 Identities=19% Similarity=0.304 Sum_probs=125.2
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--CeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~l 716 (905)
.++|...+.||+|+||.||+|.. .+|+.||+|+++.... .....+.+|++++.+++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46788899999999999999996 4689999999864322 2234577899999999999999999998754 45788
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 165 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM 165 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence 887
Q ss_pred -------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc--Cccc---------
Q 002581 720 -------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN--NQSL--------- 780 (905)
Q Consensus 720 -------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~--------- 780 (905)
.|+|||.+.+ ..++.++|||||||++|||++|+.|+......+.. .-+...... ....
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQL---DLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhcCCCChhhchhhhccccc
Confidence 3999999876 45899999999999999999999998754332211 111111100 0000
Q ss_pred ccc--CC-CCCCC---CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 GLV--DP-TLTEF---NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~~~--d~-~l~~~---~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+ .. ..... .......+.+++..|++.||++|||+.||+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 00 00000 0011234567888999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.9e-19 Score=196.44 Aligned_cols=185 Identities=16% Similarity=0.201 Sum_probs=130.5
Q ss_pred HHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CC
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIE-GA 712 (905)
Q Consensus 637 ~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~ 712 (905)
++...+++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++.+++|||||++.++|.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 4455788899999999999999999984 47899999998532 22335678899999999999999999999875 45
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 84 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 84 DIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred cEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 6778887
Q ss_pred ------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HHH--------HHHHHhhcCcccccc
Q 002581 720 ------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LLE--------WAWNLHENNQSLGLV 783 (905)
Q Consensus 720 ------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~~--------~~~~~~~~~~~~~~~ 783 (905)
.|+|||++.+ ..++.++|||||||+++||+||+.|+.......... +.+ |....... ...+.+
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 242 (328)
T cd07856 164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE-NTLRFV 242 (328)
T ss_pred CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch-hhHHHH
Confidence 4999998866 568999999999999999999999986543211110 111 11110000 000000
Q ss_pred C-CCC-CCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 784 D-PTL-TEFND-----KEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 784 d-~~l-~~~~~-----~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
. -.. ...+. .....+.+++.+|++.+|++|||+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000 00011 122457788899999999999999999863
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-18 Score=194.43 Aligned_cols=116 Identities=24% Similarity=0.346 Sum_probs=102.3
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
+|...+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+++|++++|+|||++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 577889999999999999994 468999999986432 2234568899999999999999999999999999999998
Q ss_pred ----------------------------------------------------------------C---------------
Q 002581 720 ----------------------------------------------------------------G--------------- 720 (905)
Q Consensus 720 ----------------------------------------------------------------g--------------- 720 (905)
|
T Consensus 82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~ 161 (376)
T cd05598 82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (376)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence 2
Q ss_pred ------------------------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCC
Q 002581 721 ------------------------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752 (905)
Q Consensus 721 ------------------------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~ 752 (905)
|||||++.+..++.++|||||||+++||+||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 89999999999999999999999999999999
Q ss_pred CCCCCCC
Q 002581 753 ANSDNSL 759 (905)
Q Consensus 753 ~p~~~~~ 759 (905)
.||....
T Consensus 242 ~Pf~~~~ 248 (376)
T cd05598 242 PPFLADT 248 (376)
T ss_pred CCCCCCC
Confidence 9997543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-18 Score=183.85 Aligned_cols=163 Identities=21% Similarity=0.433 Sum_probs=126.8
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|++++++++|+|++++++++......++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3667789999999999999854 678999999975433 345679999999999999999999999999889999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 160 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV 160 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||+..+..++.++||||+|++++||++|+.|+...... .. .| .... .. .+.+.. ....
T Consensus 161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~---~~-~~--~~~~-~~-----~~~~~~---~~~~ 225 (254)
T cd06627 161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM---AA-LF--RIVQ-DD-----HPPLPE---GISP 225 (254)
T ss_pred cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH---HH-HH--HHhc-cC-----CCCCCC---CCCH
Confidence 499999998888999999999999999999999998643211 11 11 1111 00 111111 1123
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+..++.+|+..+|++||++.|++.
T Consensus 226 ~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 226 ELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHhCChhhCcCHHHHhc
Confidence 4667888999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=186.50 Aligned_cols=171 Identities=22% Similarity=0.314 Sum_probs=121.6
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+++. .+++.||||++... .....+.|.+|+.++..++|+||+++++++..++..++|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3677789999999999999995 46899999999642 2223456899999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 8
Q ss_pred -------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 -------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
+|||||++.. +.++.++|||||||++|||+||+.||...... +............. +.+..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~-~~~~~ 233 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQ-FPPDV 233 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCccc-CCCcc
Confidence 5999999873 56889999999999999999999998743221 11111111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...+ +.+..+++- +.|...++..||++.++++.
T Consensus 234 ~~~~-~~~~~li~~-ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 234 TDVS-EEAKDLIRR-LICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCC-HHHHHHHHH-HccCcccccCCCCHHHHhcC
Confidence 1222 233333331 23556666668999988874
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-18 Score=188.76 Aligned_cols=174 Identities=19% Similarity=0.336 Sum_probs=127.3
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|...+.||+|++|.||+|... +++.+|+|++..... .....+.+|++++++++|+||+++++++..++..++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 345678999999999999964 689999999865432 235678999999999999999999999999988999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 160 (283)
T cd05118 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV 160 (283)
T ss_pred CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence
Q ss_pred --CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcC------cccc--------c
Q 002581 720 --GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENN------QSLG--------L 782 (905)
Q Consensus 720 --gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~------~~~~--------~ 782 (905)
.|+|||...+. .++.++|||||||+++||+||+.|+......+... -+....... ...+ .
T Consensus 161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLF---KIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 49999999877 78999999999999999999999986543222111 010000000 0000 0
Q ss_pred ---cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 ---VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ---~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+.......+.....+.+++..||+.+|.+||+|.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000001111223456788999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-18 Score=191.33 Aligned_cols=168 Identities=22% Similarity=0.284 Sum_probs=127.4
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|... +++.||||.+..... ...+.+.+|++++++++|+||+++++++..+...++|+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 35777889999999999999965 489999999965432 24467999999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 8
Q ss_pred ------C------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccch
Q 002581 720 ------G------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763 (905)
Q Consensus 720 ------g------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~ 763 (905)
+ |+|||++.+..++.++|||||||++|||++|+.|+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 1 8999999999999999999999999999999999875432211
Q ss_pred hhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 764 IYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 764 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+ ...... . ...... ......+.+++.+|++.+|++|||++..++.+.
T Consensus 241 --~----~~~~~~-~------~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 241 --F----SNILKK-E------VTFPGS-PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred --H----HHHhcC-C------ccCCCc-cccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 1 011110 0 011111 012345777888999999999999555554443
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-18 Score=205.43 Aligned_cols=245 Identities=24% Similarity=0.378 Sum_probs=196.6
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
+.+.|++.+++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|.|+ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 46788888888774 565553 57999999999998 5677654 58999999999998 5777664 479999999
Q ss_pred cccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCC
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212 (905)
Q Consensus 133 ~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~ 212 (905)
+|++. .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|++++|++++ +|..+. ++|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 99998 7888765 58999999999998 4777664 589999999999984 666543 579999999999984 6
Q ss_pred CccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCC
Q 002581 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID 292 (905)
Q Consensus 213 p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~ 292 (905)
|..+. ++|+.|++++|.+...+ ..+ .++|+.|+|++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. .
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~LP-~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~ 388 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTSLP-ASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--A 388 (754)
T ss_pred Ccccc--ccceeccccCCccccCC-hhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--H
Confidence 65543 68999999999876543 222 368999999999998 5776553 68999999999999 5777664 4
Q ss_pred CCCEEECcCCcCccCCCCCC------CCCCCEEEeecCCCCC
Q 002581 293 SLNYLFLGNNSLSGTLPTQK------SENLQNIDLSYNHLSG 328 (905)
Q Consensus 293 ~L~~L~Ls~N~l~g~~p~~~------~~~L~~L~Ls~N~lsg 328 (905)
+|+.|++++|+|+ .+|..+ .+.+..|+|.+|.|+.
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 7999999999998 566532 3678999999999973
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-18 Score=186.21 Aligned_cols=177 Identities=19% Similarity=0.340 Sum_probs=124.5
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc-ccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH-QGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|+..+++++ |+||+++++++..++..++|+|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 456788999999999999975 478999999864422 22334668999999999 9999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 160 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVS 160 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCC
Confidence
Q ss_pred --CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HH---------HHHHHHhhcCccccccC--
Q 002581 720 --GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LL---------EWAWNLHENNQSLGLVD-- 784 (905)
Q Consensus 720 --gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~---------~~~~~~~~~~~~~~~~d-- 784 (905)
.|+|||+... ..++.++|||||||+++||+||+.|+......+... .. .|.............+.
T Consensus 161 ~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd07830 161 TRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF 240 (283)
T ss_pred cccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccc
Confidence 4899998754 568999999999999999999999886543222110 00 11111100000000000
Q ss_pred --CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 785 --PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 --~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+.+........+.+++.+||+.+|++|||+.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 241 APTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000001111345778999999999999999999976
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-18 Score=176.23 Aligned_cols=193 Identities=17% Similarity=0.271 Sum_probs=132.5
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcc--cHHHHHHHHHHHhhCCCCCcceEEeEEEe--CCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQ--GKNQFVNEIATISAVQHRNLVRLYGCCIE--GARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~~~H~niv~l~g~~~~--~~~~~lv 717 (905)
++|...+.|++|.||.||+|+. ++++.||.|+++..... -.-.-+|||.+|.+++|||||.+..+... -+..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 3456678999999999999994 56899999999754321 23457899999999999999999887763 4578999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
||
T Consensus 156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T 235 (419)
T KOG0663|consen 156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT 235 (419)
T ss_pred HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc
Confidence 98
Q ss_pred ------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC-----
Q 002581 720 ------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL----- 787 (905)
Q Consensus 720 ------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l----- 787 (905)
.|.|||.+.+. .|++..|+||+|||+.||+++++-|.+...-++. +-+...+.. ..+-+.|.+
T Consensus 236 ~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl---~~If~llGt--Pte~iwpg~~~lp~ 310 (419)
T KOG0663|consen 236 PLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL---DKIFKLLGT--PSEAIWPGYSELPA 310 (419)
T ss_pred ceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH---HHHHHHhCC--CccccCCCccccch
Confidence 69999999875 6999999999999999999999888765433322 222222211 111111111
Q ss_pred ------CCCCHH----------HHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccCCcccCCCCCCccc
Q 002581 788 ------TEFNDK----------EALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYLTDW 842 (905)
Q Consensus 788 ------~~~~~~----------~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~~~~~~~p~~~~~~ 842 (905)
...+.. -....+++.-..+..||.+|-|+.|.++.= .....+.+..|.+++.|
T Consensus 311 ~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~--~F~e~P~p~~P~~~Pt~ 379 (419)
T KOG0663|consen 311 VKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE--YFRETPLPIDPSMFPTW 379 (419)
T ss_pred hhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc--ccccCCCCCChhhcCCC
Confidence 111110 113355666677889999999999988621 11122234455555554
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-18 Score=192.10 Aligned_cols=158 Identities=19% Similarity=0.264 Sum_probs=120.4
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~ 718 (905)
+|+..+.||+|+||+||+|.. .+|+.||||++... .....+.+..|.+++..+. |++|+++.+++...+..++|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366778999999999999985 46899999999643 2233456889999999885 577888999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~ 160 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT 160 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence 8
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|||||++.+..++.++|||||||++|||+||+.|+...... .+.+.+ .. .. ..++ ...
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i---~~-~~------~~~p---~~~ 224 (323)
T cd05615 161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQSI---ME-HN------VSYP---KSL 224 (323)
T ss_pred ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHH---Hh-CC------CCCC---ccC
Confidence 599999999999999999999999999999999999754321 111111 11 11 0111 111
Q ss_pred HHHHHHHHHHhccCCCCCCCCHH
Q 002581 795 ALRVIGVALLCTQASPMMRPPMS 817 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ 817 (905)
...+.+++.+|++.+|.+|++..
T Consensus 225 ~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 225 SKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CHHHHHHHHHHcccCHhhCCCCC
Confidence 23466788899999999999853
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-18 Score=194.11 Aligned_cols=180 Identities=20% Similarity=0.272 Sum_probs=125.6
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc--CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC--CeeE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA--SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG--ARRL 715 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~--~~~~ 715 (905)
.++|...+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++ +|+||++++|+|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456778899999999999999964 6889999998532 223345688999999999 999999999998653 3578
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 86 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~ 165 (337)
T cd07852 86 LVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPE 165 (337)
T ss_pred EEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccccc
Confidence 8887
Q ss_pred -----------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH--------HHhhcCcc
Q 002581 720 -----------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW--------NLHENNQS 779 (905)
Q Consensus 720 -----------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~--------~~~~~~~~ 779 (905)
.|+|||++.+ ..++.++|||||||++|||+||+.|+......+...-..+.. ..+.....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (337)
T cd07852 166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFA 245 (337)
T ss_pred CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhH
Confidence 2899998765 568899999999999999999999986543222111000000 00000000
Q ss_pred ccccC----C---CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVD----P---TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d----~---~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.++++ . .+..........+.+++.+||+.+|++|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 246 ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00111 0 001111112345778899999999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-18 Score=193.89 Aligned_cols=121 Identities=21% Similarity=0.316 Sum_probs=103.4
Q ss_pred HHHHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR 713 (905)
Q Consensus 638 l~~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~ 713 (905)
+....++|...+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+++++.++|||||++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3345677888999999999999999964 5889999998642 12234568899999999999999999999999999
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 999998
Q ss_pred ----------CCCChhhhccC----CCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ----------GYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ----------gY~APE~~~~~----~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
+|||||.+.+. .++.++||||+||++|||+||+.||...
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 59999998753 4889999999999999999999999754
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-18 Score=192.58 Aligned_cols=160 Identities=19% Similarity=0.219 Sum_probs=118.1
Q ss_pred CccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHH-HHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIA-TISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+.||+|+||+||+|+.. +++.||+|++.... .....++.+|.. +++.++|+|||++++++...+..++|+|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 57889999996432 122344555554 5678999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 160 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP 160 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||++|||+||+.||......+ ..+++ .. ... .+++. .+ ..+.
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i---~~-~~~--~~~~~---~~----~~~~ 224 (325)
T cd05602 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNI---LN-KPL--QLKPN---IT----NSAR 224 (325)
T ss_pred cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HHHHH---Hh-CCc--CCCCC---CC----HHHH
Confidence 5999999999999999999999999999999999997533211 11111 11 100 01111 12 2355
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 800 GVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
++..+|++.+|.+||++.+.+..+.
T Consensus 225 ~li~~~l~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05602 225 HLLEGLLQKDRTKRLGAKDDFMEIK 249 (325)
T ss_pred HHHHHHcccCHHHCCCCCCCHHHHh
Confidence 6777999999999999876554443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-18 Score=192.97 Aligned_cols=178 Identities=17% Similarity=0.252 Sum_probs=126.4
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEe----CCee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIE----GARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~----~~~~ 714 (905)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++|+|||++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36788889999999999999995 468999999986432 2345678899999999999999999998753 3456
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 78876
Q ss_pred ------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh-----------
Q 002581 720 ------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE----------- 775 (905)
Q Consensus 720 ------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~----------- 775 (905)
.|+|||++.. ..++.++|||||||++|||++|+.||......... ..+.....
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~---~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL---KLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH---HHHHHHhCCChhHhhhhhc
Confidence 4899998865 46899999999999999999999999754322211 11111100
Q ss_pred cCccccccC--CCCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 776 NNQSLGLVD--PTLTEF-----NDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 776 ~~~~~~~~d--~~l~~~-----~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.....+..+ +..... .......+.+++..|++.+|++||++.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000 000001 11123457788899999999999999998873
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-18 Score=191.73 Aligned_cols=180 Identities=22% Similarity=0.286 Sum_probs=123.3
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC------
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------ 712 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------ 712 (905)
.++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 56788899999999999999995 4689999999864322 22356789999999999999999999875433
Q ss_pred --eeEEEEc-----------------------------------------------------------------------
Q 002581 713 --RRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 713 --~~~lv~e----------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 3477765
Q ss_pred ------------------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 ------------------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 ------------------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|+|||+..+. .++.++|||||||+++||+||+.|+...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 19999988654 58999999999999999999999987543322111110000000
Q ss_pred hc------Ccccccc----CCCCCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 775 EN------NQSLGLV----DPTLTEF----NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 775 ~~------~~~~~~~----d~~l~~~----~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. ....... ....... .......+.+++.+|++.+|++|||+.|++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00 0000000 0001000 0111235678899999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=183.40 Aligned_cols=116 Identities=22% Similarity=0.312 Sum_probs=100.5
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+++.. +++.||||++... .....+.|.+|+.++..++|+||+++++++...+..++|+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46778899999999999999954 6889999998642 1223455889999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 8
Q ss_pred -------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 -------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 -------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
+|||||++.+ +.++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 5999999876 57899999999999999999999999753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-18 Score=182.77 Aligned_cols=163 Identities=20% Similarity=0.408 Sum_probs=127.6
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
+|...+.||+|+||.||++... +++.||||++..... ...+++.+|++++++++|+|++++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4667789999999999999964 689999999975432 456679999999999999999999999988888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||+.....++.++||||||++++||++|+.|++..... +....... .. . +.+..
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~-~~----~-~~~~~--- 225 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKILK-GQ----Y-PPIPS--- 225 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHhc-CC----C-CCCCC---
Confidence 399999999999999999999999999999999998654311 11111111 11 1 11111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.....+.+++..|+..+|++|||+.|+++
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 12234677888999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-18 Score=190.43 Aligned_cols=181 Identities=21% Similarity=0.267 Sum_probs=127.8
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC------
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------ 711 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------ 711 (905)
..+.|...+.||+|+||.||+|.. .+|+.||||++... .....+++.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 346788889999999999999994 57899999998642 223345788999999999999999999988643
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 173 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 173 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence 24578887
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HH--------HH-------HHHHhh
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LL--------EW-------AWNLHE 775 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~--------~~-------~~~~~~ 775 (905)
.|+|||+..+..++.++|||||||+++||++|+.||.......... +. +| +.....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (353)
T cd07850 174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVE 253 (353)
T ss_pred CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhh
Confidence 4999999999999999999999999999999999986432111000 00 00 000000
Q ss_pred cCc------cccccCCCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 NNQ------SLGLVDPTL-----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 ~~~------~~~~~d~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
... ..+.+...+ ..........+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 254 NRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred cCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 001111111 0001123345678889999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=210.71 Aligned_cols=169 Identities=17% Similarity=0.281 Sum_probs=125.1
Q ss_pred HHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--C
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--A 712 (905)
Q Consensus 638 l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~ 712 (905)
.....++|...+.||+|+||+||+|.. .++..||+|.+... .......|.+|+.++.+++|||||++++++... .
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 334556888899999999999999995 45788999998643 223456799999999999999999999987542 3
Q ss_pred eeEEEEc-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~lv~e------------------------------------------------------------------------- 719 (905)
..++|||
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 4566665
Q ss_pred --------------------------------------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCCC
Q 002581 720 --------------------------------------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNSL 759 (905)
Q Consensus 720 --------------------------------------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~~ 759 (905)
.|||||++.+ ..++.++||||||||||||+||+.||....
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 4899999864 458999999999999999999999997432
Q ss_pred ccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 760 DTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 760 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. ...+. .+..+ .+..+... ...+.+++..||+.+|.+||++.|++.
T Consensus 248 ~~-----~qli~-~lk~~-----p~lpi~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NF-----SQLIS-ELKRG-----PDLPIKGK----SKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cH-----HHHHH-HHhcC-----CCCCcCCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 11111 11111 01111112 234667888999999999999999984
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-18 Score=192.96 Aligned_cols=177 Identities=18% Similarity=0.224 Sum_probs=127.5
Q ss_pred HHHHHHHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEe
Q 002581 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 710 (905)
Q Consensus 635 ~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~ 710 (905)
+.++....++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|+.+++.++|||||++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4556667789999999999999999999964 6889999998632 12234568899999999999999999999999
Q ss_pred CCeeEEEEc-----------------------------------------------------------------------
Q 002581 711 GARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 711 ~~~~~lv~e----------------------------------------------------------------------- 719 (905)
+...++|+|
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 999999998
Q ss_pred -------------CCCChhhhccC----CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccc
Q 002581 720 -------------GYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -------------gY~APE~~~~~----~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 782 (905)
+|||||++... .++.++|||||||++|||+||+.||....... ..............
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~ 268 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTF 268 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCcccC
Confidence 49999998753 38899999999999999999999997533211 11111111111111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHH
Q 002581 783 VDPTLTEFNDKEALRVIGVALLCTQASPMM--RPPMSRVVAML 823 (905)
Q Consensus 783 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPsm~ev~~~L 823 (905)
|..... ...+..++..|++..+.+ ||++.|+++..
T Consensus 269 --~~~~~~----s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 269 --PDDNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred --CCcCCC----CHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111112 223455667888744433 77888888743
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-18 Score=191.54 Aligned_cols=172 Identities=22% Similarity=0.326 Sum_probs=123.1
Q ss_pred CCCccccccceeEEEEEe-CCCcEEEEEEccccCccc--------------HHHHHHHHHHHhhCCCCCcceEEeEEEeC
Q 002581 647 PSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQG--------------KNQFVNEIATISAVQHRNLVRLYGCCIEG 711 (905)
Q Consensus 647 ~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~--------------~~~f~~E~~~l~~~~H~niv~l~g~~~~~ 711 (905)
..+.||+|+||+||+|.. .+++.||||++....... ...+.+|++++++++|+|||++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 357799999999999995 468999999986432111 12578999999999999999999999999
Q ss_pred CeeEEEEc---------------------------------------------------------------------C--
Q 002581 712 ARRLLVYD---------------------------------------------------------------------G-- 720 (905)
Q Consensus 712 ~~~~lv~e---------------------------------------------------------------------g-- 720 (905)
+..++|+| +
T Consensus 93 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~ 172 (335)
T PTZ00024 93 DFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYP 172 (335)
T ss_pred CcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccc
Confidence 99999987 2
Q ss_pred --------------------------CCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH
Q 002581 721 --------------------------YLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773 (905)
Q Consensus 721 --------------------------Y~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~ 773 (905)
|+|||++.+. .++.++|||||||+++||+||+.|+......+ ....+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~i~~~ 249 (335)
T PTZ00024 173 PYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QLGRIFEL 249 (335)
T ss_pred cccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHH
Confidence 8999998764 47999999999999999999999987543221 12222221
Q ss_pred hhcCc---cccc--------c----CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 774 HENNQ---SLGL--------V----DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 774 ~~~~~---~~~~--------~----d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..... ..+. . .+............+.+++..|++.+|++|||+.||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 250 LGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred hCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11100 0000 0 00000001112344678889999999999999999996
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-18 Score=187.63 Aligned_cols=176 Identities=21% Similarity=0.320 Sum_probs=123.4
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCe-----
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGAR----- 713 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~----- 713 (905)
++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3677889999999999999995 468999999986432 223467899999999995 6999999999987655
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 688887
Q ss_pred ---------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc---cc
Q 002581 720 ---------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ---SL 780 (905)
Q Consensus 720 ---------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~ 780 (905)
.|+|||++.+ ..++.++|||||||+++||+||+.|+......+. +.. +........ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~ 237 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LLH-IFKLLGTPTEQVWP 237 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH-HHHHhCCCChhhCc
Confidence 3999998875 4579999999999999999999999865322111 110 000000000 00
Q ss_pred cc---cC----CC-----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 GL---VD----PT-----LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~~---~d----~~-----l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .+ +. +....+.....+.+++..|++.+|.+||++.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 00 00 00000112344677889999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-18 Score=189.77 Aligned_cols=166 Identities=19% Similarity=0.306 Sum_probs=127.9
Q ss_pred HhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc----Cc-ccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCe
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA----SH-QGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGAR 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~----~~-~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~ 713 (905)
....|...+.||+|+||+||.|. ..+++.||||+++.. .. ...+...+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45678889999999999999998 457899999977653 11 22345668999999999 9999999999999999
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~ 174 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE 174 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence 999998
Q ss_pred -----------CCCChhhhccCC-CC-ccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 -----------GYLAPEYAMRGH-LT-EKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -----------gY~APE~~~~~~-~t-~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||.+.+.. |+ .++||||+||+|+.|++|+.||+..... .+ ......+. -.
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~---~l----~~ki~~~~------~~ 241 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP---NL----YRKIRKGE------FK 241 (370)
T ss_pred CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH---HH----HHHHhcCC------cc
Confidence 599999999876 76 8999999999999999999999863211 11 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
++.... ...+..++.+|++.+|.+|+|+.+|++
T Consensus 242 ~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 242 IPSYLL--SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 122210 234666778999999999999999994
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-18 Score=193.20 Aligned_cols=189 Identities=16% Similarity=0.210 Sum_probs=130.0
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEE
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCI 709 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~ 709 (905)
....++..++++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.+++|+|||++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34567778899999999999999999999984 578999999996432 223456889999999999999999999886
Q ss_pred eC------CeeEEEEc----------------------------------------------------------------
Q 002581 710 EG------ARRLLVYD---------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~------~~~~lv~e---------------------------------------------------------------- 719 (905)
.. ...+++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 87 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred ecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccc
Confidence 43 23455554
Q ss_pred ---------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhh-HHHH-------HHHHhh
Q 002581 720 ---------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LLEW-------AWNLHE 775 (905)
Q Consensus 720 ---------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~-l~~~-------~~~~~~ 775 (905)
.|+|||+..+ ..++.|+|||||||+++||+||+.|+.......... +..+ ......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T cd07877 167 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 246 (345)
T ss_pred cccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcc
Confidence 4999999876 568999999999999999999999986433211110 0000 000000
Q ss_pred cCcc-------ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 NNQS-------LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 ~~~~-------~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... ....+....+........+.+++..|++.+|.+||++.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 247 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred cHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000 000000000000011234677888999999999999999886
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-19 Score=177.81 Aligned_cols=168 Identities=20% Similarity=0.284 Sum_probs=129.8
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++.|+..++||+|.|+.||++. .++|+.+|+|+++.. +..+.++..+|+.+-+.++|||||+|.....+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3556677899999999999998 567999999998643 3346678899999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 8
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
+|||||++...+|+..+|||+-||||+-|+.|+.||.+.... .+ ++.+..+.. + +++.-.+...
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rl----ye~I~~g~y-d-~~~~~w~~is 240 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RL----YEQIKAGAY-D-YPSPEWDTVT 240 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HH----HHHHhcccc-C-CCCcccCcCC
Confidence 799999999999999999999999999999999999853221 11 121222211 1 1221111122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
++ .-.+..+++..||.+|-|+.|.++
T Consensus 241 ~~---Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 241 PE---AKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HH---HHHHHHHHhccChhhhccHHHHhC
Confidence 33 344556888999999999999875
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.1e-18 Score=176.95 Aligned_cols=191 Identities=17% Similarity=0.240 Sum_probs=132.1
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccc--cCcccHHHHHHHHHHHhhCCCCCcceEEeEEEe-----CCe
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI--ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE-----GAR 713 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~--~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-----~~~ 713 (905)
...|...+.||+|+||.|+++. ..+|+.||||++.. ......++-.||+++|++++|+|||.+...... -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3445556889999999999999 45789999999963 344556788999999999999999999998765 346
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.|+|+|
T Consensus 101 vYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 101 VYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred eEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 688887
Q ss_pred -----------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH--------hhcCcc
Q 002581 720 -----------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL--------HENNQS 779 (905)
Q Consensus 720 -----------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~--------~~~~~~ 779 (905)
.|.|||.+.. ..||...||||.||++.||++||+-|.+...-++..++..+-.. ......
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 6899999876 47999999999999999999999988765443333332211100 000001
Q ss_pred ccccC--CCCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhcCccCCcc
Q 002581 780 LGLVD--PTLTEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA--MLAGDIEVGTV 832 (905)
Q Consensus 780 ~~~~d--~~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~--~L~~~~~~~~~ 832 (905)
...+. |..+..+ +..-...+++..+++..||.+|+|+.|+++ .|....++.+.
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE 322 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE 322 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC
Confidence 11110 0111100 011223566777899999999999999987 44444444333
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-18 Score=184.64 Aligned_cols=162 Identities=17% Similarity=0.259 Sum_probs=121.1
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEcccc-----CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA-----SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
|...+.||+|+||.||+++.. .+..+++|.++.. ......++.+|+.++++++||||+++++++.+....++|+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 667789999999999999854 3455666665421 1223446788999999999999999999998888888888
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~ 161 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDL 161 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCccc
Confidence 7
Q ss_pred --------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 --------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 --------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|+|||+..+..++.++||||||+++|||+||+.|+..... ......... + ..+. .+
T Consensus 162 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~~~-~-----~~~~---~~ 226 (260)
T cd08222 162 ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRIVE-G-----PTPS---LP 226 (260)
T ss_pred ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHc-C-----CCCC---Cc
Confidence 48999999888899999999999999999999999864321 111111111 1 1111 12
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
......+.+++.+||+.+|++||++.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 227 ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 223345677888999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-18 Score=183.87 Aligned_cols=174 Identities=23% Similarity=0.371 Sum_probs=126.6
Q ss_pred CCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|+|++++++++...+..++|+|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 445678999999999999965 58999999997543 3334678899999999999999999999999888999987
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 160 (282)
T cd07829 81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV 160 (282)
T ss_pred CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence
Q ss_pred --CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc------cccc--cCCCCC
Q 002581 720 --GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ------SLGL--VDPTLT 788 (905)
Q Consensus 720 --gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~~~--~d~~l~ 788 (905)
.|+|||++.+. .++.++|||||||+++||+||+.|+......+ ...++........ ..++ .+....
T Consensus 161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 49999999877 89999999999999999999998886533211 1111111110000 0000 011110
Q ss_pred C--------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 789 E--------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 789 ~--------~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. ..+.....+.+++..|++.+|++||++.+|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 00011345788899999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-18 Score=186.63 Aligned_cols=167 Identities=18% Similarity=0.254 Sum_probs=131.1
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
..++|....+||+|+||.||.|+- .+|..+|+|+++.... ...+...+|-.+|....+++||+|+-.+.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999994 5699999999976532 335568899999999999999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|||
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 999
Q ss_pred ------------------------------------------------------CCCChhhhccCCCCccCceEeechhh
Q 002581 720 ------------------------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVA 745 (905)
Q Consensus 720 ------------------------------------------------------gY~APE~~~~~~~t~k~DVySfGvvL 745 (905)
-|||||++.+..|+..+|.||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 49999999999999999999999999
Q ss_pred HHhHhCCCCCCCCCccch-hhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 002581 746 LEVISGRANSDNSLDTEK-IYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPP---MSRVVA 821 (905)
Q Consensus 746 lElltg~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPs---m~ev~~ 821 (905)
+||+.|-+||....+.+. ..++.|....... .-.. ...+..+++.+|+. ||++|-- +.||-+
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP---------~~~~----~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRETLKFP---------EEVD----LSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC---------CcCc----ccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 999999999987665442 3455554322111 1001 11335566667777 9999965 444443
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-18 Score=185.78 Aligned_cols=162 Identities=22% Similarity=0.305 Sum_probs=124.1
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||.||++... +++.||||++.... ....+.+.+|++++++++||||+++++++..+...++|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 35777889999999999999954 68999999986432 223567999999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 160 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG 160 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence 8
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
+|+|||++.+...+.++|||||||+++||+||+.|+...... ... .....+. ..+.... ...
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~----~~~~~~~------~~~~~~~---~~~ 224 (290)
T cd05580 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIY----EKILEGK------VRFPSFF---SPD 224 (290)
T ss_pred CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHhcCC------ccCCccC---CHH
Confidence 499999999889999999999999999999999998643311 111 1111111 1111111 234
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHH
Q 002581 798 VIGVALLCTQASPMMRP-----PMSRVV 820 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RP-----sm~ev~ 820 (905)
+.++..+||+.+|.+|| +++|++
T Consensus 225 l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 225 AKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 56677899999999998 555554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-18 Score=181.27 Aligned_cols=171 Identities=20% Similarity=0.298 Sum_probs=122.5
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCee-----EEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR-----LLV 717 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~-----~lv 717 (905)
.|...+++|.|+||.||+|++. +++.||||+....... --+|+++|+++.|||||+|+-++...... .||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3456789999999999999964 5789999998644322 23799999999999999999988754322 334
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 44
Q ss_pred ---------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---C-------cc
Q 002581 720 ---------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---N-------QS 779 (905)
Q Consensus 720 ---------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~-------~~ 779 (905)
.|.|||.+.+. .||.+.||||-|||+.||+-|++-|.+....++ ++..+ +++.. + ..
T Consensus 181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~eIi-k~lG~Pt~e~I~~mn~~y 257 (364)
T KOG0658|consen 181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVEII-KVLGTPTREDIKSMNPNY 257 (364)
T ss_pred CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHHHH-HHhCCCCHHHHhhcCccc
Confidence 59999999875 799999999999999999999998876543332 22222 11111 0 11
Q ss_pred ccccCCCCCCC------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVDPTLTEF------NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d~~l~~~------~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+.-.|.+... ........++++.++++.+|.+|.++.|+++
T Consensus 258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 12222333211 1223345778888999999999999999886
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-18 Score=193.26 Aligned_cols=179 Identities=17% Similarity=0.236 Sum_probs=123.8
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC----------
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG---------- 711 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~---------- 711 (905)
.+|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|++++++++|+||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5677889999999999999995 56899999999766555667899999999999999999999765543
Q ss_pred ----CeeEEEEc--------------------------------------------------------------------
Q 002581 712 ----ARRLLVYD-------------------------------------------------------------------- 719 (905)
Q Consensus 712 ----~~~~lv~e-------------------------------------------------------------------- 719 (905)
...++|+|
T Consensus 85 ~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~ 164 (342)
T cd07854 85 LTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARI 164 (342)
T ss_pred ccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence 24567776
Q ss_pred ------------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---C
Q 002581 720 ------------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---N 777 (905)
Q Consensus 720 ------------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~ 777 (905)
.|+|||++.. ..++.|+|||||||++|||+||+.||......+.............. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07854 165 VDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRN 244 (342)
T ss_pred cCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 3899998755 56889999999999999999999999754332211100000000000 0
Q ss_pred cc----cc-cc-CCCCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 778 QS----LG-LV-DPTLTEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 ~~----~~-~~-d~~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .. .. +......+ ......+.+++..|++.||.+|||+.||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 245 ELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00 00 00 00000000 011234667889999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=179.31 Aligned_cols=154 Identities=18% Similarity=0.266 Sum_probs=118.1
Q ss_pred cccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++.++...++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 799999999999965 48999999986432 2334679999999999999999999999999999999998
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
.|+|
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 160 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA 160 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence 4999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVAL 803 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~ 803 (905)
||+.....++.++||||||+++|||+||+.|+....... .++........ ..+.. +......+..++.
T Consensus 161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~i~ 228 (262)
T cd05572 161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGN-----GKLEF---PNYIDKAAKDLIK 228 (262)
T ss_pred hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccC-----CCCCC---CcccCHHHHHHHH
Confidence 999998899999999999999999999999987543211 11111111100 01111 1111345778888
Q ss_pred HhccCCCCCCCCH
Q 002581 804 LCTQASPMMRPPM 816 (905)
Q Consensus 804 ~C~~~~P~~RPsm 816 (905)
.||+.+|++||+|
T Consensus 229 ~~l~~~p~~R~~~ 241 (262)
T cd05572 229 QLLRRNPEERLGN 241 (262)
T ss_pred HHccCChhhCcCC
Confidence 9999999999993
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-17 Score=192.74 Aligned_cols=167 Identities=20% Similarity=0.301 Sum_probs=133.4
Q ss_pred CCCCCccccccceeEEEEEeCCC-cEEEEEEccccCcccHHHHHHHHHHHhhCC-CCCcceEEe-EEEe----C--CeeE
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSDG-RVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYG-CCIE----G--ARRL 715 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g-~~~~----~--~~~~ 715 (905)
....++|.+|||+.||.|....+ ..||+|++-..++...+...+||++|++++ |+|||.+++ .... + -+.+
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 34578899999999999997655 999999997767777888999999999997 999999999 3322 1 2567
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
|.||
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~ 198 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL 198 (738)
T ss_pred eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence 7777
Q ss_pred ---------------------CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh
Q 002581 720 ---------------------GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE 775 (905)
Q Consensus 720 ---------------------gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~ 775 (905)
.|.|||.+. +..+++|+|||++||+||-|+-...||+...
T Consensus 199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg---------------- 262 (738)
T KOG1989|consen 199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG---------------- 262 (738)
T ss_pred CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----------------
Confidence 599999874 5689999999999999999999999998532
Q ss_pred cCccccccCCCC--CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCccCCc
Q 002581 776 NNQSLGLVDPTL--TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGT 831 (905)
Q Consensus 776 ~~~~~~~~d~~l--~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~~~~ 831 (905)
...|++... +.+ +....++..++..|++.+|.+||++.||+..+......+.
T Consensus 263 ---~laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 263 ---KLAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ---ceeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 123444443 222 3455668888999999999999999999998876665543
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.5e-18 Score=181.90 Aligned_cols=161 Identities=23% Similarity=0.267 Sum_probs=118.6
Q ss_pred cccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||+||++.. .+|+.||||.+.... ....+.|.+|++++++++||||+++++++...+..++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999985 468999999986432 2234567899999999999999999999999999999998
Q ss_pred ------------------------------------------------------------------------------CC
Q 002581 720 ------------------------------------------------------------------------------GY 721 (905)
Q Consensus 720 ------------------------------------------------------------------------------gY 721 (905)
.|
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY 160 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence 59
Q ss_pred CChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHH
Q 002581 722 LAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGV 801 (905)
Q Consensus 722 ~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l 801 (905)
+|||+..++.++.++|||||||+++||++|+.|+........ .+.+...... ....+. ......+.++
T Consensus 161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~------~~~~~~---~~~~~~~~~l 228 (277)
T cd05577 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KEELKRRTLE------MAVEYP---DKFSPEAKDL 228 (277)
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc---HHHHHhcccc------ccccCC---ccCCHHHHHH
Confidence 999999988999999999999999999999999865432110 0001110000 011111 1112336677
Q ss_pred HHHhccCCCCCCCCHHH-HHHHH
Q 002581 802 ALLCTQASPMMRPPMSR-VVAML 823 (905)
Q Consensus 802 ~~~C~~~~P~~RPsm~e-v~~~L 823 (905)
+..|++.+|.+||+.++ .+..|
T Consensus 229 i~~~l~~~p~~R~~~~~~~~~~l 251 (277)
T cd05577 229 CEALLQKDPEKRLGCRGGSADEV 251 (277)
T ss_pred HHHHccCChhHccCCCcccHHHH
Confidence 88999999999996555 44433
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=182.68 Aligned_cols=116 Identities=23% Similarity=0.341 Sum_probs=99.8
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...++||+|+||+||+++.. +++.||||++... .....+.|.+|+.++..++|+||+++++++...+..++|+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36778899999999999999965 4788999998632 1223445889999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 8
Q ss_pred -------CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 -------GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 -------gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
+|||||++. .+.++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 599999986 356899999999999999999999999753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-18 Score=192.12 Aligned_cols=159 Identities=20% Similarity=0.278 Sum_probs=126.0
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~l 716 (905)
.++|...++||+|+||+|+.+.+. +++.+|||+++... ..+.+..+.|.+++.-+ +||-|++|++++...++.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467888999999999999999965 57899999997542 34567788998888777 59999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|||
T Consensus 447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~Ts 526 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTS 526 (694)
T ss_pred EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccc
Confidence 998
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||.+.+..||..+|.|||||+||||+.|..||.+...++. ...+. ..|+..+ .-
T Consensus 527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-------FdsI~------~d~~~yP---~~ 590 (694)
T KOG0694|consen 527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-------FDSIV------NDEVRYP---RF 590 (694)
T ss_pred cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHh------cCCCCCC---Cc
Confidence 49999999999999999999999999999999999986543221 11110 0122222 22
Q ss_pred HHHHHHHHHHHhccCCCCCCCCH
Q 002581 794 EALRVIGVALLCTQASPMMRPPM 816 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm 816 (905)
...+.+.|+.+.+..+|++|--+
T Consensus 591 ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 591 LSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ccHHHHHHHHHHhccCcccccCC
Confidence 33446667778899999999876
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-17 Score=187.50 Aligned_cols=117 Identities=22% Similarity=0.360 Sum_probs=102.6
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+++.. +++.||||++.... ....+.+.+|++++.+++|+|||++++++...+..++|+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36777899999999999999954 68999999996432 223456889999999999999999999999999999999
Q ss_pred c----------------------------------------------------------------C--------------
Q 002581 719 D----------------------------------------------------------------G-------------- 720 (905)
Q Consensus 719 e----------------------------------------------------------------g-------------- 720 (905)
| |
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 8 1
Q ss_pred -----------------------------------------CCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCC
Q 002581 721 -----------------------------------------YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSL 759 (905)
Q Consensus 721 -----------------------------------------Y~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~ 759 (905)
|||||++.+..++.++|||||||+++||+||+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 899999999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-19 Score=189.77 Aligned_cols=271 Identities=21% Similarity=0.238 Sum_probs=153.1
Q ss_pred CEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEeccc-ccCCCCCCccccCCCCccEEEecc
Q 002581 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN-NNFSGALPPEIGNLAKLEELYIDS 157 (905)
Q Consensus 79 ~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~-N~l~~~lP~~i~~L~~L~~L~L~~ 157 (905)
..|+|..|+|+.+.|..|+.+++|+.|||++|.|+.+-|++|.+|.+|..|-+.+ |+|+..--..|++|..|+.|.+..
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4667777777766666777777777777777777777777777777766655544 667643334567777777777777
Q ss_pred cCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCC------------CCCCccccCCCCCCEE
Q 002581 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ------------GPIPSSLSKLASLESL 225 (905)
Q Consensus 158 n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~------------g~~p~~l~~l~~L~~L 225 (905)
|++.-.....|..|++|..|.+.+|.+...--..|..+.+++.+++..|.+- ...|..++........
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 7777666677777777777777777766333336666777777777766632 1112222222222222
Q ss_pred EecCcccCCCChhhh-hCCCcccccccccccccCCCC-cccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCc
Q 002581 226 RISDIYFVSSSLDFV-MSLKNLKDLSLRNALITGTIP-SGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303 (905)
Q Consensus 226 ~l~~n~~~~~~~~~~-~~l~~L~~L~L~~N~l~~~ip-~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 303 (905)
.+...++.......| ..+..+..-..+.+..-+.-| ..|..+++|+.|+|++|++++.-+.+|..+..++.|.|..|+
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch
Confidence 222222211111111 111111111111222222223 246666777777777777766666666666677777777776
Q ss_pred CccCCCCC---CCCCCCEEEeecCCCCCCCCcccc--cccc-cccccccceec
Q 002581 304 LSGTLPTQ---KSENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFTFD 350 (905)
Q Consensus 304 l~g~~p~~---~~~~L~~L~Ls~N~lsg~ip~~~~--~~l~-l~l~~N~~~~~ 350 (905)
+.- +... -...|+.|+|++|+++-.-|..+. ..+. ++|-.|+|.|+
T Consensus 310 l~~-v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 310 LEF-VSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred HHH-HHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 652 2211 124566677777777655554443 2333 66777777665
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.7e-18 Score=189.75 Aligned_cols=119 Identities=22% Similarity=0.343 Sum_probs=101.6
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCC-C-----CCcceEEeEEEeCCeeEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-H-----RNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H-----~niv~l~g~~~~~~~~~l 716 (905)
.|...++||+|.||.|-||. ..+++.||||+++... .-.++-..|+.+|..++ | -|+|++++|+...+..||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 56778999999999999999 5679999999997442 22345667999999997 4 489999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v 345 (586)
T KOG0667|consen 266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV 345 (586)
T ss_pred eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcc
Confidence 999
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccch
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~ 763 (905)
.|.|||++.+.+|+++.||||||||+.||+||.+-|.+....++
T Consensus 346 ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ 396 (586)
T KOG0667|consen 346 YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ 396 (586)
T ss_pred eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHH
Confidence 59999999999999999999999999999999776765544433
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-18 Score=188.97 Aligned_cols=176 Identities=17% Similarity=0.263 Sum_probs=127.7
Q ss_pred CCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----eeE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RRL 715 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~~ 715 (905)
+|...+.||+|+||.||+|+.. +++.||||++.... ....+.|.+|++++++++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 3667889999999999999965 48999999996543 334567999999999999999999999988765 678
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~ 160 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK 160 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence 8887
Q ss_pred ----------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc-----------C
Q 002581 720 ----------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN-----------N 777 (905)
Q Consensus 720 ----------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~ 777 (905)
.|+|||++.+. .++.++||||||++++||+||+.||......+.. ..+...... .
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQL---NLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHH---HHHHHhcCCCChhHhhhcccc
Confidence 28999999888 8999999999999999999999998755432211 111111000 0
Q ss_pred ccccccC---CC----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 778 QSLGLVD---PT----LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 778 ~~~~~~d---~~----l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...+.+. .. +..........+.+++..||+.+|.+||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000 00 000011123446778899999999999999999973
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-18 Score=181.64 Aligned_cols=160 Identities=20% Similarity=0.263 Sum_probs=123.4
Q ss_pred cccccceeEEEEEeC-CCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTLS-DGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||.||+++.. +|+.||+|.+..... ...+.+.+|++++.+++|+||+++++++..+...++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999864432 345679999999999999999999999999889999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR 160 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 794 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 794 (905)
.|+|||+......+.++||||||++++|++||+.|+......+ ....... +.. + ..... ..
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~~-~~~----~--~~~~~-~~ 226 (265)
T cd05579 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQNILN-GKI----E--WPEDV-EV 226 (265)
T ss_pred cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhc-CCc----C--CCccc-cC
Confidence 2899999998889999999999999999999999987543221 1111111 110 0 00000 01
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 795 ALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 795 ~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
...+..++..|++.+|++|||+.+|.+.|+
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 334677888999999999999977777665
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.1e-18 Score=187.48 Aligned_cols=152 Identities=20% Similarity=0.215 Sum_probs=110.9
Q ss_pred cccccceeEEEEEe-CCCcEEEEEEccccC---cccHHHHHHHHHHHhhC---CCCCcceEEeEEEeCCeeEEEEc----
Q 002581 651 LGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAV---QHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~---~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
||+|+||+||+|+. .+++.||||++.... ......+..|..++.+. +||||+++++++......++|+|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999995 468999999986432 12234566787777766 69999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 160 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT 160 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence
Q ss_pred CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
+|||||++.+. .++.++|||||||++|||+||+.||......+ + ......+. ..+... .....+
T Consensus 161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~---~----~~~i~~~~------~~~~~~--~~~~~~ 225 (330)
T cd05586 161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ---M----YRNIAFGK------VRFPKN--VLSDEG 225 (330)
T ss_pred cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH---H----HHHHHcCC------CCCCCc--cCCHHH
Confidence 59999999765 48999999999999999999999987532211 1 11111111 111110 011234
Q ss_pred HHHHHHhccCCCCCCCCHH
Q 002581 799 IGVALLCTQASPMMRPPMS 817 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ 817 (905)
.+++..|++.+|.+||++.
T Consensus 226 ~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 226 RQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred HHHHHHHcCCCHHHCCCCC
Confidence 5677899999999999544
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-17 Score=185.40 Aligned_cols=169 Identities=19% Similarity=0.266 Sum_probs=131.6
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcc---cHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQ---GKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~l 716 (905)
...|...+.||+|.||.||+++.. +|+.+|+|++...... ..+...+|+++|.++. |||||.+.+++......++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 345666789999999999999965 4999999999654332 3468999999999998 9999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 998
Q ss_pred ---------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCC
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ---------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
+|+|||......|+.++||||.||+++.|++|.+||......+.. . ....+.. +.-++...
T Consensus 194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~--~-----~i~~~~~-~f~~~~w~-- 263 (382)
T KOG0032|consen 194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF--L-----AILRGDF-DFTSEPWD-- 263 (382)
T ss_pred eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH--H-----HHHcCCC-CCCCCCcc--
Confidence 699999999999999999999999999999999999865432211 1 1111111 11111111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.....+-.+...++..||.+|+|+.++++.
T Consensus 264 --~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 264 --DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred --ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 122234456678999999999999999983
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.3e-18 Score=188.19 Aligned_cols=162 Identities=20% Similarity=0.286 Sum_probs=126.7
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
-|...+.||+|+-|.|-.|+ ..+|+.+|||++.... ........+|+-+|+-+.||||++|++++.+..+.|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 35667889999999999999 5689999999996542 2223457899999999999999999999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 93 yv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSC 172 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSC 172 (786)
T ss_pred ecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccC
Confidence
Q ss_pred ---CCCChhhhccCCCC-ccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ---GYLAPEYAMRGHLT-EKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---gY~APE~~~~~~~t-~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|.|||.+++.+|. .++||||.||||+.|+||+-||++..- ..+.. .++.|.. + ++. ...
T Consensus 173 GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---r~LLl----KV~~G~f-~-----MPs---~Is 236 (786)
T KOG0588|consen 173 GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---RVLLL----KVQRGVF-E-----MPS---NIS 236 (786)
T ss_pred CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---HHHHH----HHHcCcc-c-----CCC---cCC
Confidence 69999999999885 789999999999999999999984321 12222 2222221 1 111 112
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.++-.+..+++..||++|-||+||.+
T Consensus 237 ~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 237 SEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHHHHHHHHHhccCccccccHHHHhh
Confidence 23445666888999999999999998
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-17 Score=187.58 Aligned_cols=181 Identities=17% Similarity=0.260 Sum_probs=124.9
Q ss_pred HhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC-----
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA----- 712 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~----- 712 (905)
..++|...+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|++++++++|+|||++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 46678888999999999999998 4578999999985422 223456889999999999999999999987543
Q ss_pred -eeEEEEc------------------------------------------------------------------------
Q 002581 713 -RRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 713 -~~~lv~e------------------------------------------------------------------------ 719 (905)
..++|+|
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 172 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM 172 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc
Confidence 3477776
Q ss_pred -------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchh-hHH--------HHHHHHhhcC-----
Q 002581 720 -------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI-YLL--------EWAWNLHENN----- 777 (905)
Q Consensus 720 -------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~-~l~--------~~~~~~~~~~----- 777 (905)
.|+|||++.+ ..++.++|||||||+++||++|+.|+......... .+. +|........
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (343)
T cd07880 173 TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYV 252 (343)
T ss_pred cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHH
Confidence 4899999876 46899999999999999999999998754321100 000 0110000000
Q ss_pred -ccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 778 -QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 -~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.........+..........+.+++.+|++.||.+|||+.+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 253 KKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000010001112234677888999999999999999985
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=182.24 Aligned_cols=170 Identities=21% Similarity=0.267 Sum_probs=118.1
Q ss_pred CccccccceeEEEEEeCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
+.+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++|+||+++++++...+..++++|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3445556666666665 6899999998643 23345679999999999999999999999999888899887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence
Q ss_pred ------CCCChhhhcc--CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh-----------cCccc
Q 002581 720 ------GYLAPEYAMR--GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE-----------NNQSL 780 (905)
Q Consensus 720 ------gY~APE~~~~--~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~~ 780 (905)
.|+|||++.. ..++.++|||||||++|||++|+.||....... .+.+-...... .....
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCcC
Confidence 3899999876 358899999999999999999999987543211 11111110000 00000
Q ss_pred c----ccCCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 G----LVDPTLT-----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~----~~d~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. ..++... .........+.+++..||+.+|++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 0111110 011112235677889999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=4e-17 Score=175.61 Aligned_cols=164 Identities=20% Similarity=0.314 Sum_probs=121.3
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc-----CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--Cee
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA-----SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARR 714 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~ 714 (905)
.+|...+.||+|+||.||+|.. .+++.||+|++... .....+.|.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999995 46899999987432 122345799999999999999999999998764 456
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 77776
Q ss_pred ------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||+..+..++.++|||||||+++||+||+.|+......+ .+ ...... -.++.+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~----~~~~~~-----~~~~~~ 230 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AI----FKIATQ-----PTKPML 230 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HH----HHHHcC-----CCCCCC
Confidence 4899999998889999999999999999999999986432111 11 111100 011122
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+. .....+.+++..|++ +|.+||+..+++.
T Consensus 231 p~---~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 231 PD---GVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred Cc---ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 21 222335667778998 5799999997764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-17 Score=177.83 Aligned_cols=164 Identities=18% Similarity=0.174 Sum_probs=119.1
Q ss_pred CccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHH-hhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 649 NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATI-SAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l-~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
+.||+|+||.||+|.. .+|+.||||++..... .....+..|..++ ...+|+|++++++++..++..++|+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999985 4689999999864321 2223455665554 45589999999999999999999998
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002581 720 ----------------------------------------------------------------------------GYLA 723 (905)
Q Consensus 720 ----------------------------------------------------------------------------gY~A 723 (905)
.|+|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~ 161 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLA 161 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccC
Confidence 5999
Q ss_pred hhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHH
Q 002581 724 PEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVAL 803 (905)
Q Consensus 724 PE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~ 803 (905)
||+..+..++.++|||||||+++||+||+.|+......+ . ... ...+... ..+... ......+.+++.
T Consensus 162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~---~~~-~~~~~~~--~~~~~~---~~~~~~~~~~i~ 229 (260)
T cd05611 162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA---V---FDN-ILSRRIN--WPEEVK---EFCSPEAVDLIN 229 (260)
T ss_pred hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---H---HHH-HHhcccC--CCCccc---ccCCHHHHHHHH
Confidence 999998889999999999999999999999987543211 1 111 1111100 011111 112234778888
Q ss_pred HhccCCCCCCCCHHHHHHHHh
Q 002581 804 LCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 804 ~C~~~~P~~RPsm~ev~~~L~ 824 (905)
.|++.+|++||++.++.+.|.
T Consensus 230 ~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 230 RLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHccCCHHHccCCCcHHHHHc
Confidence 999999999998877766654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-18 Score=176.30 Aligned_cols=182 Identities=20% Similarity=0.294 Sum_probs=133.9
Q ss_pred CHHHHHHHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeC
Q 002581 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEG 711 (905)
Q Consensus 634 ~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~ 711 (905)
+++|+.+-|+ ++||+|+|+.|-.++ +.+|..+|||++.......+.+..+|++++...+ |+||++|+.|+.+.
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4688888775 569999999999998 7889999999998776677888999999999995 99999999999999
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
+..|||+|
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 99999999
Q ss_pred ----------------------CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH
Q 002581 720 ----------------------GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 ----------------------gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~ 772 (905)
.|||||+.. ...|+.++|.||+|||||-|++|..||.+.-+.+...-...+..
T Consensus 229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr 308 (463)
T KOG0607|consen 229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR 308 (463)
T ss_pred cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence 599999864 34689999999999999999999999987654432110000111
Q ss_pred HhhcCccccccCCCCCCCCHH----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 773 LHENNQSLGLVDPTLTEFNDK----EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~----~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..++.-...+-+... +++++ ...+.-+++..-+..+|.+|-++.+|+.
T Consensus 309 ~CQ~~LFesIQEGkY-eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 309 VCQNKLFESIQEGKY-EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHHHHHHhccCC-cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111111111222222 22221 1222334555566789999999999887
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-17 Score=179.22 Aligned_cols=168 Identities=21% Similarity=0.268 Sum_probs=125.2
Q ss_pred CCCCCccccccceeEEEEEe----CCCcEEEEEEccccC----cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeE
Q 002581 645 FDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLSIAS----HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~ 715 (905)
|...+.||+|+||.||+++. .+++.||||++.... ....+.|.+|++++.++ +|+||+++++++..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56678899999999999984 357889999986432 22345689999999999 5999999999998888889
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE 161 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccccc
Confidence 9988
Q ss_pred ---------CCCChhhhccCC--CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCC
Q 002581 720 ---------GYLAPEYAMRGH--LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ---------gY~APE~~~~~~--~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|+|||+..+.. .+.++||||||++++||+||+.|+...... ....+........ ++...
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~-------~~~~~ 232 (288)
T cd05583 162 RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS-------KPPFP 232 (288)
T ss_pred ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc-------CCCCC
Confidence 489999987765 789999999999999999999998532111 1111111111111 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 789 ~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
. .....+.+++.+|++.+|++|||+++|.+.|+
T Consensus 233 ~---~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 233 K---TMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred c---ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1 11223567788999999999999999998876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-17 Score=179.21 Aligned_cols=163 Identities=21% Similarity=0.348 Sum_probs=130.7
Q ss_pred cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.-|+.++.||+|.|..|-.|+ .=+|+.||||+++... .......++|++.|+-++|||||+|+.+.......|||.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 346667889999999999998 4479999999997543 2334568899999999999999999999988888999988
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence
Q ss_pred -----CCCChhhhccCCCCc-cCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -----GYLAPEYAMRGHLTE-KADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~-k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|-|||.+.+..|+. ++||||+||+||-|++|+.||....+.+... -++|-.. ..+..
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT---------------mImDCKY-tvPsh 241 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT---------------MIMDCKY-TVPSH 241 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh---------------hhhcccc-cCchh
Confidence 599999999998874 7899999999999999999998765544221 1233222 12333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
...++..++..++..||.+|.+..||+.
T Consensus 242 vS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 242 VSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 4455677888999999999999999986
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.2e-19 Score=168.74 Aligned_cols=159 Identities=30% Similarity=0.540 Sum_probs=80.1
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecc
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls 132 (905)
++++|.+++|.++ .+|+.+..|.+|++|++++|+|+ .+|..++.+++|+.|+++-|++. .+|..||.++.|++|||.
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 4455555555544 33444555555555555555554 34555555555555555555554 445555555555555555
Q ss_pred cccCCC-CCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCC
Q 002581 133 NNNFSG-ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP 211 (905)
Q Consensus 133 ~N~l~~-~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~ 211 (905)
+|++.. .+|..|..++.|+.|+|+.|.+. .+|..+++|++||.|.+.+|.+. .+|..++.++.|++|++.+|+++ .
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-v 187 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-V 187 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-e
Confidence 555432 34444555555555555555443 34455555555555555555444 34555555555555555555554 3
Q ss_pred CCcccc
Q 002581 212 IPSSLS 217 (905)
Q Consensus 212 ~p~~l~ 217 (905)
+|..++
T Consensus 188 lppel~ 193 (264)
T KOG0617|consen 188 LPPELA 193 (264)
T ss_pred cChhhh
Confidence 344333
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-18 Score=189.67 Aligned_cols=178 Identities=21% Similarity=0.302 Sum_probs=125.1
Q ss_pred HhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe----
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR---- 713 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~---- 713 (905)
..++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567888899999999999999964 5889999998642 22234568899999999999999999998765554
Q ss_pred --eEEEEc------------------------------------------------------------------------
Q 002581 714 --RLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 714 --~~lv~e------------------------------------------------------------------------ 719 (905)
.++|+|
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEM 172 (343)
T ss_pred ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccc
Confidence 677777
Q ss_pred -------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh-----------cCccc
Q 002581 720 -------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE-----------NNQSL 780 (905)
Q Consensus 720 -------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~~ 780 (905)
.|+|||...+ ..++.++|||||||+++||+||+.|+......+. ......... .....
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 173 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ---LKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHhcCCCCHHHHhhccchhHH
Confidence 3999999865 3688999999999999999999999865432111 111101000 00000
Q ss_pred ccc-------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 781 GLV-------DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 781 ~~~-------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+ .+............+.+++.+|++.+|.+|||+.||++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 00000000011345778899999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-18 Score=189.49 Aligned_cols=164 Identities=22% Similarity=0.352 Sum_probs=122.5
Q ss_pred CCCCCccccccceeEEEEEeCC-CcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
|.+...||.|+||+||||+-.+ +-..|.|++...+....++|+-|+++|+.+.||+||+|++.|...+..++..|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 3445668999999999999554 55668899987777788899999999999999999999998777766666665
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGT 193 (1187)
T KOG0579|consen 114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGT 193 (1187)
T ss_pred chHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCC
Confidence
Q ss_pred -CCCChhhhc-----cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 -GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 -gY~APE~~~-----~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||+++ ...|+.|+|||||||.|.||.-+.+|...-.+. ..+...+ .--.|.+.. +..
T Consensus 194 PYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM--RVllKia----------KSePPTLlq-PS~ 260 (1187)
T KOG0579|consen 194 PYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIA----------KSEPPTLLQ-PSH 260 (1187)
T ss_pred cccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH--HHHHHHh----------hcCCCcccC-cch
Confidence 699999886 357999999999999999999999997643221 1111111 111122311 112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
-...+-++...|+.++|..||+++++++
T Consensus 261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 261 WSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2234666777999999999999998876
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-17 Score=182.07 Aligned_cols=165 Identities=18% Similarity=0.319 Sum_probs=129.2
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe-eEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR-RLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~-~~lv~ 718 (905)
++|...+++|+|+||.++..+. .++..+++|++.... ...++...+|+.++++++|||||...+.+.+.+. .++|+
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 4566678999999999998874 357899999997543 3445678999999999999999999999998887 88888
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
+
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a 163 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA 163 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence 7
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.||.||.+.+..|..|+|+||+||+++||.+-|++|....-. .++ .+..+ ..++|.-.
T Consensus 164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li---~ki~~-----~~~~Plp~---- 228 (426)
T KOG0589|consen 164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELI---LKINR-----GLYSPLPS---- 228 (426)
T ss_pred heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHH---HHHhh-----ccCCCCCc----
Confidence 599999999999999999999999999999999999854321 122 11111 11222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
....++..++..|++.+|..||++.+++.+
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 222335567779999999999999999975
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.2e-17 Score=174.15 Aligned_cols=170 Identities=17% Similarity=0.217 Sum_probs=120.6
Q ss_pred HHHHHHHhcCCCCCCcc--ccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 635 YAELRSATKDFDPSNKL--GEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 635 ~~~l~~~t~~f~~~~~i--G~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
..++....++|...+.+ |+|+||.||+++. .++..+|+|.+....... .|+.....+ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34455555677666666 9999999999995 468899999986432111 122222222 69999999999999
Q ss_pred CCeeEEEEc-----------------------------------------------------------------------
Q 002581 711 GARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 711 ~~~~~lv~e----------------------------------------------------------------------- 719 (905)
.+..++|+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 999999998
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCC
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|+|||++.+..++.++|||||||+++||+||+.|+..... +......|.... . ... .
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~-~---------~~~-~ 228 (267)
T PHA03390 161 GTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQ-Q---------KKL-P 228 (267)
T ss_pred CCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhh-c---------ccC-C
Confidence 59999999999999999999999999999999999874432 222233332221 1 000 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPP-MSRVVA 821 (905)
Q Consensus 790 ~~~~~~~~~~~l~~~C~~~~P~~RPs-m~ev~~ 821 (905)
........+.+++..|++.+|.+||+ +.|+++
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 229 FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 01112234667778999999999996 688774
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-18 Score=169.82 Aligned_cols=162 Identities=20% Similarity=0.340 Sum_probs=122.6
Q ss_pred CCccccccceeEEEEEe-CCCcEEEEEEccccCc-ccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc-----
Q 002581 648 SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH-QGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
...||.|+||+|+|-.. +.|+..|||+++.... .++++|+.|.++..+- ..||||+++|.+...+..++-||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~S 148 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDIS 148 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhh
Confidence 45699999999999884 5799999999976543 5677899999876555 78999999999999888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~da 228 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDA 228 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhcc
Confidence
Q ss_pred ---CCCChhhhccC--CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH--
Q 002581 720 ---GYLAPEYAMRG--HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND-- 792 (905)
Q Consensus 720 ---gY~APE~~~~~--~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-- 792 (905)
.|||||.+... -|+.+|||||+||+|+|+.||+.|+..- .++.+-+..... =||.+-..+.
T Consensus 229 GCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-----~svfeql~~Vv~-------gdpp~l~~~~~~ 296 (361)
T KOG1006|consen 229 GCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-----DSVFEQLCQVVI-------GDPPILLFDKEC 296 (361)
T ss_pred CCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-----HHHHHHHHHHHc-------CCCCeecCcccc
Confidence 59999998643 4899999999999999999999998631 112222222211 1232211122
Q ss_pred -HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 793 -KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 -~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+....+...+-.|+-+|-.+||...++.+
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 23345777788999999999999998775
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-17 Score=176.26 Aligned_cols=170 Identities=15% Similarity=0.220 Sum_probs=115.3
Q ss_pred cCCCCCCccccccceeEEEEEeCC----CcEEEEEEccccCccc-----------HHHHHHHHHHHhhCCCCCcceEEeE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIASHQG-----------KNQFVNEIATISAVQHRNLVRLYGC 707 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~----g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~~~H~niv~l~g~ 707 (905)
+.|...++||+|+||+||+|...+ +..+|+|+........ ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 568888999999999999999654 3566777643222111 1122344455667899999999997
Q ss_pred EEeCC----eeEEEEc----------------------------------------------------------------
Q 002581 708 CIEGA----RRLLVYD---------------------------------------------------------------- 719 (905)
Q Consensus 708 ~~~~~----~~~lv~e---------------------------------------------------------------- 719 (905)
+.... ..+++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 66433 2233433
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccch-hhH--HHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK-IYL--LEWA 770 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~-~~l--~~~~ 770 (905)
.|+|||+..+..++.++|||||||+++||+||+.||........ ... .++.
T Consensus 172 la~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~ 251 (294)
T PHA02882 172 IASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI 251 (294)
T ss_pred CceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH
Confidence 59999999999999999999999999999999999975522221 111 1111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 771 WNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 771 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
.... .+.. .+.. +...+.+++..|++.+|++||++.++.+.+
T Consensus 252 ~~~~-~~~~------~~~~----~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 252 KRLH-EGKI------KIKN----ANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhh-hhhh------ccCC----CCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111 1100 0111 234477788899999999999999999876
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-17 Score=174.71 Aligned_cols=159 Identities=22% Similarity=0.260 Sum_probs=113.8
Q ss_pred ccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHHHHh---hCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 650 KLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATIS---AVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~---~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
+||+|+||.||++.. .+++.||||.+..... .....+.+|..++. ..+|+||+++.+++...+..++|+|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 4689999999864321 22334556654444 3479999999999999899999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 160 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 160 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence 6
Q ss_pred CCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 721 YLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 721 Y~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
|+|||...+ ..++.++|||||||+++||+||+.||.......... ...... ..+..+. ......+.
T Consensus 161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~------~~~~~~~---~~~~~~~~ 227 (279)
T cd05633 161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TVNVELP---DSFSPELK 227 (279)
T ss_pred ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----HHHHhh------cCCcCCc---cccCHHHH
Confidence 999999875 458999999999999999999999987543222111 111110 0111221 11223466
Q ss_pred HHHHHhccCCCCCCC-----CHHHHHH
Q 002581 800 GVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
+++..|++.||++|| +++|+++
T Consensus 228 ~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 228 SLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 677899999999999 5887766
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.9e-19 Score=186.54 Aligned_cols=291 Identities=20% Similarity=0.159 Sum_probs=227.8
Q ss_pred CceeeCCCC----CCCceeeEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEeccc-ccC
Q 002581 38 PAIVCDCTF----DNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAH-NVF 112 (905)
Q Consensus 38 ~~~~c~~~~----~~~~~~~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~-N~l 112 (905)
..|.|.... +....+..+.|+|..|+++...+.+|+.++.|+.|||++|.|+.+-|++|..|.+|..|-+.+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 356665432 223446789999999999988888999999999999999999999999999999999988877 999
Q ss_pred CCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCcccc-------
Q 002581 113 SGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT------- 185 (905)
Q Consensus 113 ~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~------- 185 (905)
+...-..|++|..|+.|.+.-|++.-...+.|..|++|..|.+..|.+...--.+|..+..++.+.+..|.+-
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 9655578999999999999999999777788999999999999999887555558999999999999988732
Q ss_pred -----CCCCCCCCCcccCCeeecccccCCCCCCccccCC-CCCC-EEEecCcccCCCChhhhhCCCcccccccccccccC
Q 002581 186 -----GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKL-ASLE-SLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258 (905)
Q Consensus 186 -----~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l-~~L~-~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 258 (905)
-..|..++...-..-..+.++++...-+..|... ..+. .+...++.....+...|..+++|++|+|++|.+++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 2234445555555555566665543333333221 1111 11112222233344568999999999999999999
Q ss_pred CCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCC--CCCCCEEEeecCCCCC
Q 002581 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSG 328 (905)
Q Consensus 259 ~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N~lsg 328 (905)
.-+.+|..+..++.|.|..|++...--..|.++..|+.|+|.+|+++-..|..+ ...|.+|+|-.|.+.-
T Consensus 289 i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 289 IEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 999999999999999999999986666678889999999999999996666544 4689999999998863
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.6e-18 Score=173.40 Aligned_cols=162 Identities=25% Similarity=0.432 Sum_probs=128.4
Q ss_pred CCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 645 FDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
|+...++|+|+||.||||.. .+|++||||++... ...++...|+.+|.+.+.|+||+.+|.|......++|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 55567899999999999985 57999999999754 346789999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGT 192 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGT 192 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccC
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
-|||||++..-.|+.++|+||+|+...||..||+|+.+..+...+.++ .. --.|... -+++-...+
T Consensus 193 PFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI-------PT-----~PPPTF~-KPE~WS~~F 259 (502)
T KOG0574|consen 193 PFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI-------PT-----KPPPTFK-KPEEWSSEF 259 (502)
T ss_pred cccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec-------cC-----CCCCCCC-ChHhhhhHH
Confidence 599999999999999999999999999999999998765432211100 00 0011111 122223446
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
-+....|+-++|++|-|+.++++
T Consensus 260 ~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 260 NDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHHHHHhcCCHHHHHHHHHHhh
Confidence 67788999999999999887765
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5e-17 Score=190.93 Aligned_cols=180 Identities=16% Similarity=0.202 Sum_probs=117.3
Q ss_pred hcCCCCCCccccccceeEEEEEeCC--CcEEEEEEcc--------------c---cCcccHHHHHHHHHHHhhCCCCCcc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSD--GRVIAVKQLS--------------I---ASHQGKNQFVNEIATISAVQHRNLV 702 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~~--g~~vAvK~l~--------------~---~~~~~~~~f~~E~~~l~~~~H~niv 702 (905)
.++|...+.||+|+||+||+|.... +..+++|.+. . ......+.|.+|+++|++++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4678889999999999999987532 2223332110 0 1112345689999999999999999
Q ss_pred eEEeEEEeCCeeEEEEc---------------------------------------------------------------
Q 002581 703 RLYGCCIEGARRLLVYD--------------------------------------------------------------- 719 (905)
Q Consensus 703 ~l~g~~~~~~~~~lv~e--------------------------------------------------------------- 719 (905)
++++++...+..++|++
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v 306 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI 306 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence 99999998888888754
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCC-CCccchhhHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDN-SLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~-~~~~~~~~l~~~~~~ 772 (905)
.|+|||++.+..++.++|||||||++|||++|+.++.. ........+.+.+..
T Consensus 307 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~ 386 (501)
T PHA03210 307 VLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDS 386 (501)
T ss_pred EEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHh
Confidence 59999999999999999999999999999999865432 221111122211110
Q ss_pred Hh--hcC------ccccccCC-CCC---CCCHH------HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 773 LH--ENN------QSLGLVDP-TLT---EFNDK------EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 773 ~~--~~~------~~~~~~d~-~l~---~~~~~------~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.. .+. ...+.++. .+. ..... ....+.++..+|++.||.+|||+.|+++
T Consensus 387 ~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 387 LSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred cccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 000 00000000 000 00000 0112455677999999999999999986
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-17 Score=179.07 Aligned_cols=163 Identities=15% Similarity=0.227 Sum_probs=125.6
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEcccc---CcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv 717 (905)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++.+++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36777889999999999999964 6899999998642 2233467899999999998 99999999999998899999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 98
Q ss_pred --------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHH
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773 (905)
Q Consensus 720 --------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~ 773 (905)
.|+|||......++.++||||||++++|++||+.|+...... .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~--- 234 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY---LTFQKI--- 234 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH---HHHHHH---
Confidence 279999999889999999999999999999999998744211 111111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCH----HHHHH
Q 002581 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPM----SRVVA 821 (905)
Q Consensus 774 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm----~ev~~ 821 (905)
.. . +..+ +......+.+++.+|++.+|.+||++ .|+++
T Consensus 235 ~~-~------~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 LK-L------EYSF---PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred Hh-c------CCCC---CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 10 0 0011 11113347778889999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-17 Score=182.30 Aligned_cols=175 Identities=16% Similarity=0.223 Sum_probs=117.8
Q ss_pred CCCCCCccccccceeEEEEEeC-C--CcEEEEEEcccc--CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeC----Ce
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLS-D--GRVIAVKQLSIA--SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG----AR 713 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~-~--g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~----~~ 713 (905)
+|...+.||+|+||.||++... + +..||||++... .....+.+.+|++++.++ .|+|||++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3666788999999999999954 4 789999998643 222356789999999999 599999999976533 23
Q ss_pred eEEEEc--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~lv~e-------------------------------------------------------------------------- 719 (905)
.++++|
T Consensus 81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~ 160 (332)
T cd07857 81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG 160 (332)
T ss_pred EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence 455544
Q ss_pred -------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh----------
Q 002581 720 -------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE---------- 775 (905)
Q Consensus 720 -------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~---------- 775 (905)
.|+|||+..+ ..++.++|||||||+++||++|+.|+......+ ....+.....
T Consensus 161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHHHhCCCCHHHHHhh
Confidence 3899998876 468999999999999999999999987533211 1111100000
Q ss_pred -cCcc-------ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 776 -NNQS-------LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 776 -~~~~-------~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.... ...-...+..........+.+++.+|++.+|.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 000000000000111234677889999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.3e-17 Score=176.18 Aligned_cols=159 Identities=21% Similarity=0.288 Sum_probs=118.1
Q ss_pred CCCCCCccccccceeEEEEEe----CCCcEEEEEEccccC----cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCee
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLSIAS----HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~ 714 (905)
+|...+.||+|+||.||++.. .+|+.||+|++.... ....+++.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778999999999999985 468999999996432 12346788999999999 599999999999988888
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 99998
Q ss_pred ----------CCCChhhhccC--CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC
Q 002581 720 ----------GYLAPEYAMRG--HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ----------gY~APE~~~~~--~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||+.... .++.++|||||||+++||+||+.|+...... ....++....... ++..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~-------~~~~ 231 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS-------EPPY 231 (290)
T ss_pred cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc-------CCCC
Confidence 49999998763 4788999999999999999999998643211 1122222221111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRP 814 (905)
Q Consensus 788 ~~~~~~~~~~~~~l~~~C~~~~P~~RP 814 (905)
+......+..++..|++.+|++||
T Consensus 232 ---~~~~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 232 ---PQEMSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred ---CccCCHHHHHHHHHHhcCCHHHhc
Confidence 111223466788899999999997
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.2e-17 Score=170.02 Aligned_cols=155 Identities=20% Similarity=0.313 Sum_probs=120.3
Q ss_pred cceeEEEEEeC-CCcEEEEEEccccCccc-HHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------------
Q 002581 655 GYGPVYKGTLS-DGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------------- 719 (905)
Q Consensus 655 ~~g~Vy~g~~~-~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------------- 719 (905)
+||.||+|+.. +|+.||+|++....... .+.|.+|++.+++++|+||++++|++......++++|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999997554444 6789999999999999999999999999889999987
Q ss_pred ----------------------------------------------------------------------CCCChhhhcc
Q 002581 720 ----------------------------------------------------------------------GYLAPEYAMR 729 (905)
Q Consensus 720 ----------------------------------------------------------------------gY~APE~~~~ 729 (905)
.|++||+...
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~ 160 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG 160 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHcc
Confidence 5999999998
Q ss_pred CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCC
Q 002581 730 GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQAS 809 (905)
Q Consensus 730 ~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~ 809 (905)
..++.++||||||++++||+||+.|++.... ...+.++.. .+.. .. ..........+.+++.+|+..+
T Consensus 161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~----~~~~----~~--~~~~~~~~~~~~~~i~~~l~~~ 228 (244)
T smart00220 161 KGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIG----KPKP----PF--PPPEWKISPEAKDLIRKLLVKD 228 (244)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHh----ccCC----CC--ccccccCCHHHHHHHHHHccCC
Confidence 9999999999999999999999999865321 112222211 1100 00 0000002245778899999999
Q ss_pred CCCCCCHHHHHH
Q 002581 810 PMMRPPMSRVVA 821 (905)
Q Consensus 810 P~~RPsm~ev~~ 821 (905)
|++||++.++++
T Consensus 229 p~~Rp~~~~~~~ 240 (244)
T smart00220 229 PEKRLTAEEALQ 240 (244)
T ss_pred chhccCHHHHhh
Confidence 999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-18 Score=164.05 Aligned_cols=157 Identities=25% Similarity=0.456 Sum_probs=136.4
Q ss_pred cccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCc
Q 002581 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150 (905)
Q Consensus 71 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L 150 (905)
.+.++++.+.|-|++|+++ .+|+.+..|.+|++|++++|+|. .+|.+++.|++|+.|+++-|++. .+|..||.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3567788899999999998 68888999999999999999998 78999999999999999999998 899999999999
Q ss_pred cEEEecccCCCC-CCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecC
Q 002581 151 EELYIDSCGASG-EIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD 229 (905)
Q Consensus 151 ~~L~L~~n~l~~-~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~ 229 (905)
+.|+|.+|++.. .+|+.|..++.|+.|+|++|.|. .+|..++++++|+.|.+..|.+- .+|..++.++.|+.|++.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 999999999875 68999999999999999999987 67888999999999999998876 5777777776666655555
Q ss_pred ccc
Q 002581 230 IYF 232 (905)
Q Consensus 230 n~~ 232 (905)
|.+
T Consensus 183 nrl 185 (264)
T KOG0617|consen 183 NRL 185 (264)
T ss_pred cee
Confidence 443
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-18 Score=192.92 Aligned_cols=249 Identities=22% Similarity=0.238 Sum_probs=124.9
Q ss_pred EEeccCccc-CCCCccccCCCCCCEEECCCCCCCCC----CchhhcCCccccEEecccccCCC------CCcccccCCCC
Q 002581 57 LRVYALNKK-GVIPEELVTLQYLTFLKIDRNFFTGP----LPSFIGNLSRLTLLSLAHNVFSG------PVPRELGNLKE 125 (905)
Q Consensus 57 L~l~~~~l~-g~ip~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~L~~L~~L~Ls~N~l~g------~ip~~l~~L~~ 125 (905)
|++..+.++ ......+..+..|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+.++++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 444455554 22344455566677777777776432 44455566667777777766652 23344566667
Q ss_pred CCeEecccccCCCCCCccccCCCC---ccEEEecccCCCC----CCchhhhcc-CccceecccCccccCC----CCCCCC
Q 002581 126 LNLLSLANNNFSGALPPEIGNLAK---LEELYIDSCGASG----EIPSTFAKL-HNMQILRASDAHFTGK----IPDFIG 193 (905)
Q Consensus 126 L~~L~Ls~N~l~~~lP~~i~~L~~---L~~L~L~~n~l~~----~~p~~l~~L-~~L~~L~L~~N~l~~~----ip~~~~ 193 (905)
|+.|+|++|.+.+..+..+..+.+ |++|++++|+++. .+...+..+ ++|+.|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 777777777666555555554444 7777777666652 222334444 5666666666666532 222334
Q ss_pred CcccCCeeecccccCCCC----CCccccCCCCCCEEEecCcccCCCCh----hhhhCCCcccccccccccccCCCCcccC
Q 002581 194 NWTKLTALRLQGNSFQGP----IPSSLSKLASLESLRISDIYFVSSSL----DFVMSLKNLKDLSLRNALITGTIPSGIG 265 (905)
Q Consensus 194 ~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~l~~n~~~~~~~----~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 265 (905)
.+++|+.|++++|.+++. ++..+..+++|++|++++|.+..... ..+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 445566666666665531 22233344455555555554432211 1223344455555555444431111111
Q ss_pred -----CCCCCCEEeccCCcCC----ccCCccccCCCCCCEEECcCCcCc
Q 002581 266 -----ELQNLQTLDLSFNNLT----GQIPRTLFNIDSLNYLFLGNNSLS 305 (905)
Q Consensus 266 -----~l~~L~~L~Ls~N~l~----g~ip~~l~~l~~L~~L~Ls~N~l~ 305 (905)
..+.|+.|++++|.++ ..+...+..+++|+++++++|.++
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 1244555555555443 112223333444555555555544
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-16 Score=172.64 Aligned_cols=159 Identities=21% Similarity=0.257 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEe-CCCcEEEEEEccccCc---ccHHHHHHHHH---HHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 650 KLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIA---TISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~---~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
+||+|+||.||+|.. .+++.||||.+..... .....+..|.. .++...|+||+++++++...+..++|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 4589999999864321 22233555544 3445579999999999999999999998
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 160 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 160 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence 5
Q ss_pred CCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 721 YLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 721 Y~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
|+|||++.++ .++.++|||||||+++||+||+.|++......... ...... ..++.+.. .....+.
T Consensus 161 y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~------~~~~~~~~---~~s~~~~ 227 (278)
T cd05606 161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TMAVELPD---SFSPELR 227 (278)
T ss_pred CcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhh------ccCCCCCC---cCCHHHH
Confidence 9999999865 68999999999999999999999987543221111 111100 11122211 1123466
Q ss_pred HHHHHhccCCCCCCC-----CHHHHHH
Q 002581 800 GVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RP-----sm~ev~~ 821 (905)
+++.+|+..+|.+|| ++.++++
T Consensus 228 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 228 SLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 777899999999999 8888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.5e-17 Score=171.18 Aligned_cols=152 Identities=22% Similarity=0.262 Sum_probs=118.4
Q ss_pred cccccceeEEEEEeC-CCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------
Q 002581 651 LGEGGYGPVYKGTLS-DGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------- 719 (905)
||+|+||.||++... +++.||||++..... ...+++.+|++++++++|+||+++++++..+...++|+|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 589999999865422 235579999999999999999999999999999999997
Q ss_pred -----------------------------------------------------------------------------CCC
Q 002581 720 -----------------------------------------------------------------------------GYL 722 (905)
Q Consensus 720 -----------------------------------------------------------------------------gY~ 722 (905)
+|+
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence 599
Q ss_pred ChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 002581 723 APEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVA 802 (905)
Q Consensus 723 APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~ 802 (905)
|||...+...+.++||||||++++|+++|+.|+..... ..+...+ .. . ...++.. ....+.+++
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~---~~-~------~~~~~~~---~~~~l~~~i 224 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKI---LK-D------PLRFPEF---LSPEARDLI 224 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHH---hc-C------CCCCCCC---CCHHHHHHH
Confidence 99999988899999999999999999999999864322 1111111 11 0 1111111 123466788
Q ss_pred HHhccCCCCCCCCHHH
Q 002581 803 LLCTQASPMMRPPMSR 818 (905)
Q Consensus 803 ~~C~~~~P~~RPsm~e 818 (905)
..|+..+|++||++.+
T Consensus 225 ~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 225 SGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHhcCCHhhCCCccc
Confidence 8999999999999955
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-16 Score=169.28 Aligned_cols=175 Identities=23% Similarity=0.351 Sum_probs=128.0
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcc--cHHHHHHHHHHHhhCCCCC-cceEEeEEEeCC------ee
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQ--GKNQFVNEIATISAVQHRN-LVRLYGCCIEGA------RR 714 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~~~H~n-iv~l~g~~~~~~------~~ 714 (905)
|...++||+|.||+||||+ ..+|+.||+|+++..... -.....+|+.++++++|+| ||+|++++.... ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 4445679999999999999 567899999999765332 2345789999999999999 999999999877 77
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
+||+|
T Consensus 93 ~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~i 172 (323)
T KOG0594|consen 93 YLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSI 172 (323)
T ss_pred EEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcC
Confidence 89988
Q ss_pred ------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc---Cccc---
Q 002581 720 ------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQSL--- 780 (905)
Q Consensus 720 ------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~--- 780 (905)
.|.|||.+.+. .|++..|+||+||++.||++++.-|.+....++ ..-+...+.. ....
T Consensus 173 p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q---l~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 173 PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ---LFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH---HHHHHHHcCCCCccCCCCcc
Confidence 69999999887 799999999999999999999888876554222 2222222211 1111
Q ss_pred cccCCC--CCCCC------H---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 781 GLVDPT--LTEFN------D---KEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 781 ~~~d~~--l~~~~------~---~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...|-. ..... . .......+++.+|++.+|.+|.|++.++.+
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111 11110 0 011256788899999999999999998874
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.3e-17 Score=192.94 Aligned_cols=71 Identities=30% Similarity=0.554 Sum_probs=58.1
Q ss_pred HHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC-cccHHHHHHHHHHHhhCCCCCcceEEeEEEe
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIE 710 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~ 710 (905)
+-..+|.+..+||+||||.|||++ .-||+.+|||++.... ........+|+++|++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE 548 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE 548 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence 345677788899999999999999 3489999999997543 2234557899999999999999999987655
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-17 Score=195.86 Aligned_cols=167 Identities=26% Similarity=0.456 Sum_probs=122.8
Q ss_pred HHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEE
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~l 716 (905)
..+-++.....||.|.||.||-|. ..+|+..|||-+.... ........+|+.++..+.|||+|+.+|+-.+++..++
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345567778999999999999999 6789999999986432 2334568899999999999999999998766655555
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
.||
T Consensus 1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 554
Q ss_pred -----------CCCChhhhccCC---CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHH-HhhcCccccccC
Q 002581 720 -----------GYLAPEYAMRGH---LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN-LHENNQSLGLVD 784 (905)
Q Consensus 720 -----------gY~APE~~~~~~---~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~d 784 (905)
.|||||.+.+.+ ..-+.||||+|||++||+|||+|+..... +|+-. ++..|+.
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~V~~gh~----- 1459 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYHVAAGHK----- 1459 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhHHhccCC-----
Confidence 599999997643 34578999999999999999999864322 23321 1122221
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
|.++ ..-..+-.+..-.|++.||++|.++.|+++
T Consensus 1460 Pq~P---~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 PQIP---ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCCc---hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 2232 222333455667999999999988877665
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-16 Score=168.70 Aligned_cols=167 Identities=20% Similarity=0.291 Sum_probs=125.7
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCc---------c-----cHHHHHHHHHHHhhCCCCCcceEEe
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASH---------Q-----GKNQFVNEIATISAVQHRNLVRLYG 706 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~---------~-----~~~~f~~E~~~l~~~~H~niv~l~g 706 (905)
.+.|.....||+|.||.|-+|. ..+++.||||++..... . ..+...+||.+|++++|+|||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4668888999999999999999 55799999999964210 0 1347889999999999999999999
Q ss_pred EEEeC--CeeEEEEc-----------------------------------------------------------------
Q 002581 707 CCIEG--ARRLLVYD----------------------------------------------------------------- 719 (905)
Q Consensus 707 ~~~~~--~~~~lv~e----------------------------------------------------------------- 719 (905)
+-.+. +..|||+|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG 255 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG 255 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence 87653 56788887
Q ss_pred ------------------------CCCChhhhccCC----CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH
Q 002581 720 ------------------------GYLAPEYAMRGH----LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW 771 (905)
Q Consensus 720 ------------------------gY~APE~~~~~~----~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~ 771 (905)
.+||||...++. ...+.||||+||+||-|+-|+.||...+.- .+.
T Consensus 256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~---~l~---- 328 (576)
T KOG0585|consen 256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL---ELF---- 328 (576)
T ss_pred eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH---HHH----
Confidence 599999998743 456789999999999999999999754321 111
Q ss_pred HHhhcCccccccCCCC--CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 772 NLHENNQSLGLVDPTL--TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 772 ~~~~~~~~~~~~d~~l--~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
. .++...+ ++. ++....+-.++.+.+.+||++|.+..+|.....
T Consensus 329 ~--------KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 329 D--------KIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred H--------HHhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1 1222222 222 123344566788999999999999999987554
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.2e-18 Score=185.91 Aligned_cols=252 Identities=21% Similarity=0.234 Sum_probs=193.4
Q ss_pred eEEEEEeccCcccCC----CCccccCCCCCCEEECCCCCCCC------CCchhhcCCccccEEecccccCCCCCcccccC
Q 002581 53 HITKLRVYALNKKGV----IPEELVTLQYLTFLKIDRNFFTG------PLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~----ip~~l~~l~~L~~L~Ls~N~l~~------~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~ 122 (905)
.++.|++.++.++.. ++..+...+.|++|+++++.+.+ .++..+.++++|++|+|++|.+.+..+..+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 488999998887542 56667788899999999998863 24567788999999999999998777777766
Q ss_pred CCC---CCeEecccccCCC----CCCccccCC-CCccEEEecccCCCCC----CchhhhccCccceecccCccccCC---
Q 002581 123 LKE---LNLLSLANNNFSG----ALPPEIGNL-AKLEELYIDSCGASGE----IPSTFAKLHNMQILRASDAHFTGK--- 187 (905)
Q Consensus 123 L~~---L~~L~Ls~N~l~~----~lP~~i~~L-~~L~~L~L~~n~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~--- 187 (905)
+.+ |++|++++|.++. .+...+..+ ++|+.|++++|.+++. ++..+..+.+|+.|++++|.+++.
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 666 9999999999873 333456667 8999999999999853 345567788999999999999853
Q ss_pred -CCCCCCCcccCCeeecccccCCCC----CCccccCCCCCCEEEecCcccCCCChhhh-h----CCCccccccccccccc
Q 002581 188 -IPDFIGNWTKLTALRLQGNSFQGP----IPSSLSKLASLESLRISDIYFVSSSLDFV-M----SLKNLKDLSLRNALIT 257 (905)
Q Consensus 188 -ip~~~~~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~l~~n~~~~~~~~~~-~----~l~~L~~L~L~~N~l~ 257 (905)
++..+..+++|+.|++++|.+++. +...+..+++|++|++++|.+.......+ . ....|++|++++|.++
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 334455567999999999998743 34456778999999999998764322222 2 2479999999999987
Q ss_pred C----CCCcccCCCCCCCEEeccCCcCCcc----CCccccCC-CCCCEEECcCCcC
Q 002581 258 G----TIPSGIGELQNLQTLDLSFNNLTGQ----IPRTLFNI-DSLNYLFLGNNSL 304 (905)
Q Consensus 258 ~----~ip~~~~~l~~L~~L~Ls~N~l~g~----ip~~l~~l-~~L~~L~Ls~N~l 304 (905)
. .+...+..+++|+.|++++|.++.. +...+... +.|++|++.+|.+
T Consensus 264 ~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 264 DDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 2 2344566778999999999999854 44445445 6788888888764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-16 Score=178.76 Aligned_cols=159 Identities=20% Similarity=0.373 Sum_probs=117.5
Q ss_pred CCccccccceeEEEEEeC-CCcEEEEEEccc----cCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCe--eEEEEc-
Q 002581 648 SNKLGEGGYGPVYKGTLS-DGRVIAVKQLSI----ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGAR--RLLVYD- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~----~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~--~~lv~e- 719 (905)
..+||+|+|=+||||... +|..||--.++. .+....++|..|+.+|+.++|+|||+++.++.+... .-+|.|
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 568999999999999954 577777444322 233445789999999999999999999999988766 445555
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence
Q ss_pred ----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.+||||.+. ..|++.+||||||+.++||+|+..||.......+ +++.+..|...+. +......+
T Consensus 205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ------IYKKV~SGiKP~s----l~kV~dPe- 272 (632)
T KOG0584|consen 205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ------IYKKVTSGIKPAA----LSKVKDPE- 272 (632)
T ss_pred ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH------HHHHHHcCCCHHH----hhccCCHH-
Confidence 599999887 8999999999999999999999999875543222 2333322221111 11112222
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 796 ~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.+++.+|+.. .++|||+.|+++
T Consensus 273 --vr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 273 --VREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred --HHHHHHHHhcC-chhccCHHHHhh
Confidence 55567799999 999999999996
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.6e-16 Score=171.53 Aligned_cols=163 Identities=18% Similarity=0.290 Sum_probs=126.0
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc---CcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA---SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~l 716 (905)
-++|...+.||+|+|.+||+|+ ...++++|||++... .+...+-..+|-++|.++ .||.||+|+-.+.+....|.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 4567778999999999999999 557899999999643 122334466888999999 89999999999999999999
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~ 231 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQ 231 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccc
Confidence 988
Q ss_pred --------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc
Q 002581 720 --------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779 (905)
Q Consensus 720 --------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 779 (905)
.|++||.+..+..+..+|+|+|||+||.|+.|++||....+ . .+.+-+.
T Consensus 232 ~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--y-liFqkI~-------- 300 (604)
T KOG0592|consen 232 ENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--Y-LIFQKIQ-------- 300 (604)
T ss_pred cCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--H-HHHHHHH--------
Confidence 59999999999999999999999999999999999975432 1 1111110
Q ss_pred ccccCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 780 LGLVDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 ~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
-+|-.++ .++ + .+.++..+-+..||.+|+|..|+-+
T Consensus 301 --~l~y~fp~~fp-~---~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 301 --ALDYEFPEGFP-E---DARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred --HhcccCCCCCC-H---HHHHHHHHHHccCccccccHHHHhh
Confidence 0122222 222 2 2445556778999999999988876
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-16 Score=159.33 Aligned_cols=118 Identities=27% Similarity=0.395 Sum_probs=104.2
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcc---cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQ---GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||.|+||+|...+.+ +|..+|+|+++..... ..+.-.+|-.+|+.+.||.+|+|.+.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35667889999999999999954 5889999999754322 3455788999999999999999999999999999999
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCG 203 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCG 203 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecC
Confidence 8
Q ss_pred --CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCc
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLD 760 (905)
Q Consensus 720 --gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~ 760 (905)
.|+|||.+.+..+...+|.|||||+++||+.|.+||....+
T Consensus 204 TPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 204 TPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred CccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 59999999999999999999999999999999999986544
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-16 Score=157.19 Aligned_cols=162 Identities=20% Similarity=0.324 Sum_probs=117.9
Q ss_pred CCccccccceeEEEEEeC-CCcEEEEEEcccc-CcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc-----
Q 002581 648 SNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD----- 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e----- 719 (905)
...||.|.-|.|+|+... +|..+|||.+... ...+.++.+..++++.+-+ .|.||+.+||+.......+-||
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C 176 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC 176 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence 456999999999999954 5899999999754 3445677888888877765 8999999999987654444443
Q ss_pred -------------------------------------------------------------------------------C
Q 002581 720 -------------------------------------------------------------------------------G 720 (905)
Q Consensus 720 -------------------------------------------------------------------------------g 720 (905)
.
T Consensus 177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~ 256 (391)
T KOG0983|consen 177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAA 256 (391)
T ss_pred HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCcc
Confidence 5
Q ss_pred CCChhhhcc---CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 002581 721 YLAPEYAMR---GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 721 Y~APE~~~~---~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
|||||.+.- .+|+.++|||||||.|+||.||+.||.....+- ....-+ ..+ ..|.++... .-...
T Consensus 257 YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF--e~ltkv---ln~------ePP~L~~~~-gFSp~ 324 (391)
T KOG0983|consen 257 YMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF--EVLTKV---LNE------EPPLLPGHM-GFSPD 324 (391)
T ss_pred ccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH--HHHHHH---Hhc------CCCCCCccc-CcCHH
Confidence 999999864 479999999999999999999999997643211 111111 111 113332111 01233
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.++...|+++|+.+||.-.++++
T Consensus 325 F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 325 FQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHHHhhcCcccCcchHHHhc
Confidence 667778999999999999988775
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-16 Score=175.75 Aligned_cols=117 Identities=29% Similarity=0.506 Sum_probs=99.5
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEcccc-CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC------CeeEE
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------ARRLL 716 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------~~~~l 716 (905)
+...+.||+||||.||+|+ -.+|+.||||.++.. ....++.+.+|+++|++++|+|||+++|.=... ...++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3456789999999999999 668999999999754 344577899999999999999999999875433 35677
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|||
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 777
Q ss_pred -------------CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCcc
Q 002581 720 -------------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDT 761 (905)
Q Consensus 720 -------------gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~ 761 (905)
.|.|||.+.. +.|+..+|-|||||++||.+||..||.+....
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 5999999995 89999999999999999999999999865443
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-16 Score=163.53 Aligned_cols=162 Identities=19% Similarity=0.326 Sum_probs=125.3
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e- 719 (905)
|...+.||+|.||+|-+|. ...|+.||||.++... .++.-...+|+++|+.+.||||+.++.++...+...+|||
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY 134 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY 134 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence 4445679999999999998 4679999999997543 3344457899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 135 aS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCG 214 (668)
T KOG0611|consen 135 ASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCG 214 (668)
T ss_pred cCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcC
Confidence
Q ss_pred --CCCChhhhccCCCC-ccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 --GYLAPEYAMRGHLT-EKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --gY~APE~~~~~~~t-~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
-|..||.+.+..|. ..+|-||+||+||-|+.|..|||+... ..++.-+ ..|... .|. .+.
T Consensus 215 SPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvrQI----s~GaYr---EP~-------~PS 277 (668)
T KOG0611|consen 215 SPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVRQI----SRGAYR---EPE-------TPS 277 (668)
T ss_pred CcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHHHh----hccccc---CCC-------CCc
Confidence 49999999888775 689999999999999999999986432 1222111 112111 111 112
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
....++.+++..+|++|.|+.+|...-
T Consensus 278 dA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 278 DASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 244567788999999999999998643
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-16 Score=174.08 Aligned_cols=159 Identities=25% Similarity=0.314 Sum_probs=123.1
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++.|.....+|.|+|+.|-++. .++++..|||++.... .+-.+|+.++.+. .|+|||++.+.|.++.+.++|+|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 4455556679999999999998 5568899999997542 2344678777776 69999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t 476 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT 476 (612)
T ss_pred hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence
Q ss_pred -CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 -GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 -gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|.|||+.....||+++|+||+||+||||+||+.|+...... .. ++..+.. +...+...++ .
T Consensus 477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~e----i~~~i~~--------~~~s~~vS~~---A 539 (612)
T KOG0603|consen 477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IE----IHTRIQM--------PKFSECVSDE---A 539 (612)
T ss_pred hcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HH----HHHhhcC--------CccccccCHH---H
Confidence 699999999999999999999999999999999999865443 11 1222221 2122222233 4
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.++...|++.||.+||+|.++..
T Consensus 540 KdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 540 KDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHHHhccCChhhCcChhhhcc
Confidence 44666999999999999999886
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-16 Score=163.77 Aligned_cols=179 Identities=17% Similarity=0.253 Sum_probs=132.8
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCC------CcceEEeEEEeCCee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHR------NLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~------niv~l~g~~~~~~~~ 714 (905)
++.|.....+|+|.||.|-++.. ..+..||||+++... .-++..+-|++++.++.+. -+|.+.+|+.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 66777888999999999999984 347899999997432 2345678899999999432 278888888888889
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 167 CivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 167 CIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 99988
Q ss_pred ---------------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH-
Q 002581 720 ---------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW- 771 (905)
Q Consensus 720 ---------------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~- 771 (905)
.|.|||++.+-..+.++||||+||||.|+.||..-|......|...+.+-+.
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 6999999999999999999999999999999999888665444332222211
Q ss_pred -------------HHhhcCcc-----------ccccCCCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 772 -------------NLHENNQS-----------LGLVDPTL-----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 772 -------------~~~~~~~~-----------~~~~d~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+.+..+.+ ..+.++.- ......+..++++++...+..||.+|+|++|+++
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 11111100 11111111 1123456677999999999999999999999886
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-15 Score=167.82 Aligned_cols=164 Identities=18% Similarity=0.260 Sum_probs=126.5
Q ss_pred HhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.+..|.....||+|.|++|..|+. .+|..||||.++.... ...+.+.+|+++|..+.|||||+++.+.......++|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 356788889999999999999994 4689999999975432 2345689999999999999999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt 213 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQT 213 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccc
Confidence 98
Q ss_pred -----CCCChhhhccCCC-CccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCC--CCCC
Q 002581 720 -----GYLAPEYAMRGHL-TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL--TEFN 791 (905)
Q Consensus 720 -----gY~APE~~~~~~~-t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l--~~~~ 791 (905)
.|.|||.+++.+| ..++|+||.|||||-|+.|.-|||+..-.+- ++ .++...+ +.+.
T Consensus 214 ~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----------r~----rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 214 FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----------RP----RVLRGKYRIPFYM 278 (596)
T ss_pred cCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----------cc----hheeeeeccccee
Confidence 5999999998765 5799999999999999999999996432220 00 1111111 1111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
. ..+-.++.+.+..+|.+|++++++.+.
T Consensus 279 s---~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 279 S---CDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred e---chhHHHHHHhhccCccccCCHHHhhhh
Confidence 1 113345567778899999999999873
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-15 Score=160.50 Aligned_cols=154 Identities=23% Similarity=0.253 Sum_probs=123.0
Q ss_pred CCCCccccccceeEEEEEeCC-CcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 646 DPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
...+.||+|.-|+||.+.+.+ +..+|+|++.... .....+...|-++|+.+.||-++.|++.+......+||||
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC 159 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC 159 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence 345789999999999999764 5889999997543 2334567889999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~ 239 (459)
T KOG0610|consen 160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSS 239 (459)
T ss_pred CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccC
Confidence
Q ss_pred ------------------------------------------------------------CCCChhhhccCCCCccCceE
Q 002581 720 ------------------------------------------------------------GYLAPEYAMRGHLTEKADVF 739 (905)
Q Consensus 720 ------------------------------------------------------------gY~APE~~~~~~~t~k~DVy 739 (905)
.|+|||++.+.-.+.++|.|
T Consensus 240 ~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWW 319 (459)
T KOG0610|consen 240 SPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWW 319 (459)
T ss_pred CCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHH
Confidence 59999999999999999999
Q ss_pred eechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcccccc--CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 002581 740 SFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLV--DPTLTEFNDKEALRVIGVALLCTQASPMMRPP 815 (905)
Q Consensus 740 SfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPs 815 (905)
+|||++|||+.|+.||-+....+. +. .++ ++..++.+ +....+-+++..-+.+||.+|--
T Consensus 320 tfGIflYEmLyG~TPFKG~~~~~T--l~-------------NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 320 TFGIFLYEMLYGTTPFKGSNNKET--LR-------------NIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred HHHHHHHHHHhCCCCcCCCCchhh--HH-------------HHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhc
Confidence 999999999999999987654331 21 122 12223322 33345666778889999999987
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=5e-15 Score=156.76 Aligned_cols=141 Identities=20% Similarity=0.146 Sum_probs=106.6
Q ss_pred ccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc-------------
Q 002581 654 GGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------------- 719 (905)
Q Consensus 654 G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------------- 719 (905)
|.||.||++.. .+++.||+|++.... .+.+|...+....||||+++++++.+.+..++|+|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999994 568999999996432 34456666666789999999999999999999998
Q ss_pred --------------------------------------------------------------------CCCChhhhccCC
Q 002581 720 --------------------------------------------------------------------GYLAPEYAMRGH 731 (905)
Q Consensus 720 --------------------------------------------------------------------gY~APE~~~~~~ 731 (905)
.|+|||+..+..
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 158 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISE 158 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCC
Confidence 399999998888
Q ss_pred CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCC
Q 002581 732 LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPM 811 (905)
Q Consensus 732 ~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~ 811 (905)
++.++||||+||+++||+||+.|++...... .......++. .....+.+++.+|++.||+
T Consensus 159 ~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~li~~~l~~dp~ 218 (237)
T cd05576 159 ETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------NTHTTLNIPE---WVSEEARSLLQQLLQFNPT 218 (237)
T ss_pred CCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------ccccccCCcc---cCCHHHHHHHHHHccCCHH
Confidence 9999999999999999999998865321100 0000011111 1123466678899999999
Q ss_pred CCCCHHHH
Q 002581 812 MRPPMSRV 819 (905)
Q Consensus 812 ~RPsm~ev 819 (905)
+||++.++
T Consensus 219 ~R~~~~~~ 226 (237)
T cd05576 219 ERLGAGVA 226 (237)
T ss_pred HhcCCCcc
Confidence 99997443
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-15 Score=162.72 Aligned_cols=116 Identities=27% Similarity=0.394 Sum_probs=101.1
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.+.|..-++||+||||.||-++. .+|+.+|.|++... ...+..-.++|-.+|.++..+-||.|--.+...+..+||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 35578889999999999999985 46999999999643 233455688999999999999999998888888888888
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+.
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 75
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
||||||++..++|+...|.||+||++|||+.|+.||-.
T Consensus 344 ~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 344 RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 89999999999999999999999999999999999864
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-14 Score=175.97 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=62.8
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++..++|+|||++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56778899999999999999965 68999999996432 223467899999999999999999998877666666666
Q ss_pred c
Q 002581 719 D 719 (905)
Q Consensus 719 e 719 (905)
|
T Consensus 84 E 84 (669)
T cd05610 84 E 84 (669)
T ss_pred e
Confidence 5
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.9e-14 Score=163.33 Aligned_cols=175 Identities=22% Similarity=0.354 Sum_probs=134.1
Q ss_pred cCHHHHHHHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE 710 (905)
Q Consensus 633 ~~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~ 710 (905)
..++.+...++-|....+||.|.+|.|||++ .++|+.+|||++.... ...++...|.+++... .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 4455566678888889999999999999999 6779999999997543 3346677888898887 69999999999974
Q ss_pred -----CCeeEEEEc------------------------------------------------------------------
Q 002581 711 -----GARRLLVYD------------------------------------------------------------------ 719 (905)
Q Consensus 711 -----~~~~~lv~e------------------------------------------------------------------ 719 (905)
+++.+||||
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeee
Confidence 678999999
Q ss_pred --------------------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHh
Q 002581 720 --------------------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLH 774 (905)
Q Consensus 720 --------------------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~ 774 (905)
.|||||++.. ..|+..+||||+||+-.||--|.+|+-+..+... ++
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra---------LF 238 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA---------LF 238 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---------hc
Confidence 5999999864 4688999999999999999999999865543221 11
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 775 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. +..--.|.+. .+..=..++.+.+..|+.+|-.+||+|.+.++
T Consensus 239 ~---IpRNPPPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 239 L---IPRNPPPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred c---CCCCCCcccc-chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 0011112221 12333456788889999999999999988765
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-14 Score=162.59 Aligned_cols=79 Identities=18% Similarity=0.383 Sum_probs=57.1
Q ss_pred HhcCCCCCCccccccceeEEEEEe-----------------CCCcEEEEEEccccCcccHHH--------------HHHH
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-----------------SDGRVIAVKQLSIASHQGKNQ--------------FVNE 689 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------f~~E 689 (905)
.+++|...++||+|+||+||+|.. .+++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999996543332333 4457
Q ss_pred HHHHhhCCCCCc-----ceEEeEEEe--------CCeeEEEEc
Q 002581 690 IATISAVQHRNL-----VRLYGCCIE--------GARRLLVYD 719 (905)
Q Consensus 690 ~~~l~~~~H~ni-----v~l~g~~~~--------~~~~~lv~e 719 (905)
+.++.+++|.++ ++++|||.. .+..+||||
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~E 265 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWK 265 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEE
Confidence 778888877665 778888764 245677765
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.5e-14 Score=155.36 Aligned_cols=161 Identities=24% Similarity=0.316 Sum_probs=120.9
Q ss_pred CCCccccccceeEEEEEe-CCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 647 PSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 647 ~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
.++++|+|.||+||-|+. ++|+.||||+++... ........+|+.+|.+++||.||.|...|...++.++|||
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 368999999999999994 579999999997542 2334678999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||++...-|...-|+||.||++|--++|-.||....+ +.+-+. +. .-+..|.. ..+...
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQIQ----NA--aFMyPp~P---W~eis~ 793 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQIQ----NA--AFMYPPNP---WSEISP 793 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhHHhh----cc--ccccCCCc---hhhcCH
Confidence 69999999999999999999999999999999999974321 111111 10 01111221 112222
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..++++-.-++..-++|-|..+-+.
T Consensus 794 ~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 794 EAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred HHHHHHHHHHHHHHHHhcchHhhcc
Confidence 3455555666777778887766543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4e-15 Score=149.60 Aligned_cols=164 Identities=19% Similarity=0.305 Sum_probs=122.9
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc------
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD------ 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e------ 719 (905)
..+|.+...|+.|+|+++ |..+++|++... +....++|..|.-.|+-+.||||..++|.|.......++..
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346788889999999997 456677887543 33445789999999999999999999999988765554432
Q ss_pred -----------------------------------------------------------------------------CCC
Q 002581 720 -----------------------------------------------------------------------------GYL 722 (905)
Q Consensus 720 -----------------------------------------------------------------------------gY~ 722 (905)
.||
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawm 353 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWM 353 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccC
Confidence 699
Q ss_pred ChhhhccCCC---CccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 723 APEYAMRGHL---TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 723 APE~~~~~~~---t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
+||.++...- -..+|+|||.|++|||.|+..||.+-.+.+..- +...+-+.+.++.. ....|.
T Consensus 354 spealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-----------kialeglrv~ippg---is~hm~ 419 (448)
T KOG0195|consen 354 SPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-----------KIALEGLRVHIPPG---ISRHMN 419 (448)
T ss_pred CHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-----------hhhhccccccCCCC---ccHHHH
Confidence 9999987643 357899999999999999999997655433210 01123334444322 233477
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 800 GVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
+++.-|+.+||.+||.+..|+-.|++.
T Consensus 420 klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 420 KLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 778889999999999999999999854
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-14 Score=143.65 Aligned_cols=168 Identities=20% Similarity=0.286 Sum_probs=125.6
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcc--------cHHHHHHHHHHHhhC-CCCCcceEEeEEEeC
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQ--------GKNQFVNEIATISAV-QHRNLVRLYGCCIEG 711 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~ 711 (905)
-+.|...+++|+|..++|-++.. ++|...|||++...... -.++-.+|+.+|+++ -||+|+++.+++...
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 34577889999999999999884 56889999999643211 134467899999998 599999999999999
Q ss_pred CeeEEEEc------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~lv~e------------------------------------------------------------------------ 719 (905)
...++|+|
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence 99999987
Q ss_pred -----------CCCChhhhcc------CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccc
Q 002581 720 -----------GYLAPEYAMR------GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -----------gY~APE~~~~------~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 782 (905)
||+|||.+.. ..|+..+|.|+.||+++-|+.|.+||... .++. +..+..+|+.. .
T Consensus 176 GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---kQml----MLR~ImeGkyq-F 247 (411)
T KOG0599|consen 176 GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---KQML----MLRMIMEGKYQ-F 247 (411)
T ss_pred chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---HHHH----HHHHHHhcccc-c
Confidence 8999998863 35888999999999999999999999732 1111 11223333221 1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
-.|. ..+....+-+++.+|++.||.+|-|.+|+++
T Consensus 248 ~spe----Wadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 248 RSPE----WADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCcc----hhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1111 1222334667888999999999999999986
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.6e-14 Score=132.09 Aligned_cols=113 Identities=23% Similarity=0.423 Sum_probs=95.0
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEccccC--cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc--
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
|+.-++||+|.||+||||+ ..+++.||.|+++... +.-....++|+-+++.++|+|||+++++...+...-||+|
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4445689999999999999 6678999999986542 2234678999999999999999999999988888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevv 163 (292)
T KOG0662|consen 84 DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV 163 (292)
T ss_pred hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceee
Confidence
Q ss_pred --CCCChhhhccCC-CCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 --GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 --gY~APE~~~~~~-~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
.|.+|.++.+.+ |++..|+||-||++.|+....+|..+
T Consensus 164 tlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred eeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 588999887754 78899999999999999986666443
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.7e-14 Score=144.79 Aligned_cols=115 Identities=25% Similarity=0.422 Sum_probs=95.0
Q ss_pred cCCCCCCccccccceeEEEEEeC---CC--cEEEEEEccccCc--ccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CCee
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS---DG--RVIAVKQLSIASH--QGKNQFVNEIATISAVQHRNLVRLYGCCIE-GARR 714 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~---~g--~~vAvK~l~~~~~--~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~~~ 714 (905)
..|.....||+|.||.||||+-. +. ..+|||+++...+ .-.....||+.+++.++|+|||.|.-++.+ +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 34667788999999999999743 22 3689999975432 224568899999999999999999999887 6677
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
+|++|
T Consensus 104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 88887
Q ss_pred --------------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 --------------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 --------------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
.|.|||.+.+. .||.+.|||+.||+..||+|-++-|..
T Consensus 184 R~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 184 RLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred HHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 69999999875 699999999999999999998776653
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-14 Score=161.37 Aligned_cols=159 Identities=26% Similarity=0.394 Sum_probs=117.7
Q ss_pred CCCCCCcccccccee-EEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc--
Q 002581 644 DFDPSNKLGEGGYGP-VYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~-Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e-- 719 (905)
-|...+++|.|+-|+ ||+|.+. |+.||||++-. .......+||..|..- .|||||+.+|.-.+....|+..|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 356678899998884 8999996 78999999852 2233467899999887 69999999987777777777776
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence
Q ss_pred -------------CCCChhhhccCCCCccCceEeechhhHHhHhC-CCCCCCCCccchhhHHHHHHHHhhcCccccccCC
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISG-RANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 -------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
||+|||.+...+-+..+|++|+|||++..+|| +.||......+ .+++ .+. ..+ +
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl--------~~~-~~L-~- 733 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANIL--------TGN-YTL-V- 733 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhh--------cCc-cce-e-
Confidence 89999999999999999999999999999997 78887543221 1111 000 000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.+... .++ ...+++..++..+|..||++.+|+.
T Consensus 734 ~L~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 HLEPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 01111 112 4566777999999999999999985
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-13 Score=137.42 Aligned_cols=125 Identities=29% Similarity=0.527 Sum_probs=108.0
Q ss_pred cccccceeEEEEEeCC-CcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---------
Q 002581 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--------- 719 (905)
Q Consensus 651 iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--------- 719 (905)
||+|++|.||++...+ ++.++||++...... ..+.|.+|++.+++++|++++++++++......++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999999754332 34679999999999999999999999998888888887
Q ss_pred -----------------------------------------------------------------------------CCC
Q 002581 720 -----------------------------------------------------------------------------GYL 722 (905)
Q Consensus 720 -----------------------------------------------------------------------------gY~ 722 (905)
.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYM 160 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCcc
Confidence 578
Q ss_pred ChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHH
Q 002581 723 APEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGV 801 (905)
Q Consensus 723 APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l 801 (905)
+||..... ..+.+.|+|++|++++|| ..+.++
T Consensus 161 ~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------~~~~~~ 193 (215)
T cd00180 161 APEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------PELKDL 193 (215)
T ss_pred ChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------HHHHHH
Confidence 89988877 888999999999999999 236678
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 002581 802 ALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 802 ~~~C~~~~P~~RPsm~ev~~~ 822 (905)
+..|++.+|++||++.++++.
T Consensus 194 l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 194 IRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHhhCCcccCcCHHHHhhC
Confidence 889999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-14 Score=146.26 Aligned_cols=118 Identities=26% Similarity=0.325 Sum_probs=102.1
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCc---ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv 717 (905)
.++|+..+++|+|.||+|-.++ ..+|+.+|+|+++..-- .+...-+.|-++|.+.+||-+..|.-.+...++.|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 3567778999999999999998 45789999999975422 2344567899999999999999988888888888999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
||
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 88
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCC
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSL 759 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~ 759 (905)
.|+|||++....|...+|.|..|||+|||++||.||+...
T Consensus 327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 5999999999999999999999999999999999998654
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.1e-14 Score=148.13 Aligned_cols=164 Identities=23% Similarity=0.331 Sum_probs=111.4
Q ss_pred CCCCCccccccceeEEEEE-eCCCcEEEEEEcccc---Cc----ccHHHHHHHHHHHhhCCCCCcceEEeEEEe-CCeeE
Q 002581 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA---SH----QGKNQFVNEIATISAVQHRNLVRLYGCCIE-GARRL 715 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~---~~----~~~~~f~~E~~~l~~~~H~niv~l~g~~~~-~~~~~ 715 (905)
|-..++||+|||..||||. +...+.||||+-... .+ .-.+...+|-++.+.+.||-||++++|+.- .+..|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 3345789999999999998 566789999986321 11 123457899999999999999999999863 34445
Q ss_pred EEEc----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 lv~e---------------------------------------------------------------------------- 719 (905)
-|.|
T Consensus 545 TVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMd 624 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMD 624 (775)
T ss_pred eeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence 5554
Q ss_pred --------------------CCCChhhhccC----CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhh
Q 002581 720 --------------------GYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE 775 (905)
Q Consensus 720 --------------------gY~APE~~~~~----~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~ 775 (905)
.|++||.+.-+ +++.|+||||.||++|..+-||+||..... ...+.+
T Consensus 625 ddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdILq------- 695 (775)
T KOG1151|consen 625 DDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDILQ------- 695 (775)
T ss_pred CCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHHHh-------
Confidence 59999998755 689999999999999999999999975322 112221
Q ss_pred cCccccccCCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 002581 776 NNQSLGLVDPTLT--EFNDKEALRVIGVALLCTQASPMMRPPMSRVV 820 (905)
Q Consensus 776 ~~~~~~~~d~~l~--~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~ 820 (905)
+..+...-+-.++ .....+ .-.++.+|++..-++|-...++.
T Consensus 696 eNTIlkAtEVqFP~KPvVsse---AkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 696 ENTILKATEVQFPPKPVVSSE---AKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhchhcceeccCCCCCccCHH---HHHHHHHHHHhhhhhhhhHHHHc
Confidence 1111111111111 111122 33456699999888886554443
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.1e-13 Score=160.07 Aligned_cols=37 Identities=35% Similarity=0.561 Sum_probs=31.9
Q ss_pred HhcCCCCCCccccccceeEEEEEeC-C----CcEEEEEEccc
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLS-D----GRVIAVKQLSI 677 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~-~----g~~vAvK~l~~ 677 (905)
..++|...+.||+|+||.||+|+.. + +..||||++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 5678999999999999999999964 4 68999998753
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.1e-14 Score=148.42 Aligned_cols=156 Identities=21% Similarity=0.296 Sum_probs=114.9
Q ss_pred cCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEE
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv 717 (905)
.+|+...+||+|+||+|..|..+ +.+.+|||+++..- ....+--+.|-++|+-- +-|-+|+|..|+...++.+.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 36888999999999999999855 46789999997431 12233345677777765 678999999999999999999
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
||
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTk 508 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTK 508 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCccee
Confidence 98
Q ss_pred ------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
-|||||.+....|...+|.|||||+|+||+.|++||++...++ + .+.+. |... .++..
T Consensus 509 TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---l----F~aI~--------ehnv-syPKs 572 (683)
T KOG0696|consen 509 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---L----FQAIM--------EHNV-SYPKS 572 (683)
T ss_pred eecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---H----HHHHH--------HccC-cCccc
Confidence 4999999999999999999999999999999999999654322 1 11111 1111 12222
Q ss_pred HHHHHHHHHHHhccCCCCCCC
Q 002581 794 EALRVIGVALLCTQASPMMRP 814 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RP 814 (905)
-..+.+.|...-+.+.|.+|-
T Consensus 573 lSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 573 LSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ccHHHHHHHHHHhhcCCcccc
Confidence 223344555566778898885
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.1e-13 Score=143.06 Aligned_cols=76 Identities=21% Similarity=0.356 Sum_probs=62.4
Q ss_pred cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCC-----C---CCcceEEeEEEe---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-----H---RNLVRLYGCCIE--- 710 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-----H---~niv~l~g~~~~--- 710 (905)
..|...++||-|.|.+||.|. ..+.+.||+|+.+.+ ..-.+..+.||++|.+++ | .+||+|++++..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 567778999999999999998 566789999999743 334566889999999885 3 479999999874
Q ss_pred -CCeeEEEEc
Q 002581 711 -GARRLLVYD 719 (905)
Q Consensus 711 -~~~~~lv~e 719 (905)
+...+||+|
T Consensus 157 NG~HVCMVfE 166 (590)
T KOG1290|consen 157 NGQHVCMVFE 166 (590)
T ss_pred CCcEEEEEeh
Confidence 568899998
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.4e-13 Score=137.98 Aligned_cols=113 Identities=32% Similarity=0.548 Sum_probs=99.1
Q ss_pred CCCCCccccccceeEEEEEeCC-CcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc---
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
|...+.||+|++|.||+|...+ ++.+|||.+...... ..+.+.+|++.+.+++|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4556889999999999999765 889999999765443 56789999999999999999999999998888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 160 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVK 160 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccccee
Confidence
Q ss_pred ---CCCChhhh-ccCCCCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 ---GYLAPEYA-MRGHLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 ---gY~APE~~-~~~~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
.|++||.. ....++.++|||+||++++||+||+.||+.
T Consensus 161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 38999998 667788899999999999999999999964
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-13 Score=138.92 Aligned_cols=166 Identities=17% Similarity=0.153 Sum_probs=119.7
Q ss_pred hcCCCC-CCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEe----CCee
Q 002581 642 TKDFDP-SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE----GARR 714 (905)
Q Consensus 642 t~~f~~-~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~----~~~~ 714 (905)
|++|+. .++||-|-.|+|-.+.. .+|+.+|.|++.. .....+|++..-+. .|||||.+++++.+ ....
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 455543 37899999999999984 5689999999963 23467899987666 69999999999864 3456
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|||
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence 77887
Q ss_pred -------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCC
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|.|||++...+|+..+|+||+||++|-|++|-+||+.... ..+..-++..++.+.. .
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg---~aispgMk~rI~~gqy------~ 285 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGMKRRIRTGQY------E 285 (400)
T ss_pred CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---ccCChhHHhHhhccCc------c
Confidence 69999999999999999999999999999999999986432 1111111222221111 0
Q ss_pred CCCCCHHHHHHH-HHHHHHhccCCCCCCCCHHHHHH
Q 002581 787 LTEFNDKEALRV-IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~~~~~~~~~-~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
+++....|+.+. -+++...+..+|.+|-|+.|++.
T Consensus 286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111122344433 34666778899999999999996
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-13 Score=132.02 Aligned_cols=112 Identities=25% Similarity=0.409 Sum_probs=94.5
Q ss_pred CCCccccccceeEEEEE-eCCCcEEEEEEcccc-CcccHHHHHHHHHHHhh-CCCCCcceEEeEEEeCCeeEEEEc----
Q 002581 647 PSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA-SHQGKNQFVNEIATISA-VQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 647 ~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~-~~H~niv~l~g~~~~~~~~~lv~e---- 719 (905)
....||+|++|.|-|-+ ..+|+..|||++... ..+.+++.++|+.+..+ ...|.+|.++|...+....++.||
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 35679999999998887 467999999999754 34556778999987655 579999999999888888888887
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~da 209 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDA 209 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhc
Confidence
Q ss_pred ---CCCChhhhcc----CCCCccCceEeechhhHHhHhCCCCCCCC
Q 002581 720 ---GYLAPEYAMR----GHLTEKADVFSFGVVALEVISGRANSDNS 758 (905)
Q Consensus 720 ---gY~APE~~~~----~~~t~k~DVySfGvvLlElltg~~p~~~~ 758 (905)
.|||||.+.. ..|+.|+||||+|+.+.||.++|.|++.-
T Consensus 210 GCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 210 GCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred CCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 5999998864 36999999999999999999999998753
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.4e-12 Score=154.29 Aligned_cols=122 Identities=25% Similarity=0.479 Sum_probs=85.7
Q ss_pred CCceeeCCCCCCCceeeEEEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCC
Q 002581 37 NPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPV 116 (905)
Q Consensus 37 ~~~~~c~~~~~~~~~~~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~i 116 (905)
|.|+.|...... ....++.|+|.++.+.|.+|..+..|++|+.|+|++|.++|.+|..++++++|++|+|++|.++|.+
T Consensus 404 w~Gv~C~~~~~~-~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~i 482 (623)
T PLN03150 404 WSGADCQFDSTK-GKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482 (623)
T ss_pred cccceeeccCCC-CceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCC
Confidence 568888532111 1125777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cccccCCCCCCeEecccccCCCCCCccccCC-CCccEEEecccC
Q 002581 117 PRELGNLKELNLLSLANNNFSGALPPEIGNL-AKLEELYIDSCG 159 (905)
Q Consensus 117 p~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L-~~L~~L~L~~n~ 159 (905)
|..+++|++|++|+|++|+++|.+|..++.+ .++..+++.+|.
T Consensus 483 P~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred chHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCc
Confidence 7777777777777777777777777766543 344555555554
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.2e-13 Score=145.42 Aligned_cols=179 Identities=16% Similarity=0.193 Sum_probs=130.6
Q ss_pred hcCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhCC------CCCcceEEeEEEeCCee
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ------HRNLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~------H~niv~l~g~~~~~~~~ 714 (905)
-..|......|+|-|++|.+|.. ..|..||||++... ..-.+.=++|+++|.++. -.|+++|+-.+...+..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 34566667789999999999994 45889999999632 222344578999999985 35899999999999999
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
|||+|
T Consensus 510 ClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 510 CLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred EEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence 99999
Q ss_pred ----------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHH-----HHhhcCccc-ccc
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW-----NLHENNQSL-GLV 783 (905)
Q Consensus 720 ----------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~-----~~~~~~~~~-~~~ 783 (905)
.|.|||.+.+..|+..-|+||.||.||||.||+.-|.+....+..-+..-+. .+++.+... +-+
T Consensus 590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHF 669 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHF 669 (752)
T ss_pred ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhc
Confidence 5999999999999999999999999999999999988766655444433222 122222111 111
Q ss_pred CCC--------------------------------C---CCCCH---HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 784 DPT--------------------------------L---TEFND---KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 d~~--------------------------------l---~~~~~---~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
|.. + ..++. ..+..+..+.-.|+..||++|-|..|+++
T Consensus 670 D~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 670 DQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred ccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111 0 01222 23445667888999999999999988775
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.9e-13 Score=133.84 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHH--HH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA--LR 797 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~--~~ 797 (905)
.|||||++.+..++.|+|||||||++|||+||+.|+....... ..+..+...... .++.-........ ..
T Consensus 69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 140 (176)
T smart00750 69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGMPA-------DDPRDRSNLESVSAARS 140 (176)
T ss_pred cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHhcc-------CCccccccHHHHHhhhh
Confidence 5999999999999999999999999999999999986432211 111111111111 0011001111111 24
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 798 ~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+.+++.+|++.+|.+||++.|+++.+.
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHH
Confidence 788999999999999999999999876
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.5e-14 Score=138.95 Aligned_cols=176 Identities=18% Similarity=0.289 Sum_probs=120.9
Q ss_pred CCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC--------Cee
Q 002581 646 DPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--------ARR 714 (905)
Q Consensus 646 ~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--------~~~ 714 (905)
....+||+|.||.||+|+. ..|+.||+|++-.. ........++|+++|..++|+|+|.++..|... ...
T Consensus 20 ek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ 99 (376)
T KOG0669|consen 20 EKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATF 99 (376)
T ss_pred HHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccccee
Confidence 3456799999999999995 45788999987432 222345678999999999999999999988642 346
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
+||++
T Consensus 100 ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n 179 (376)
T KOG0669|consen 100 YLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKN 179 (376)
T ss_pred eeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccc
Confidence 78876
Q ss_pred -------------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCcc------
Q 002581 720 -------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS------ 779 (905)
Q Consensus 720 -------------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~------ 779 (905)
.|.+||.+.+. .|+++.|||.-|||+.||.||.+-+..........++.-....+..+..
T Consensus 180 ~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~l 259 (376)
T KOG0669|consen 180 VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNL 259 (376)
T ss_pred cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccc
Confidence 59999999875 6999999999999999999999887765544444444322111111110
Q ss_pred --cccc--CCCCCC----CCHHHHH------HHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 780 --LGLV--DPTLTE----FNDKEAL------RVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 780 --~~~~--d~~l~~----~~~~~~~------~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
.+-+ .| +.+ ..++.+. ..++++-..+..||.+|+...+++..
T Consensus 260 pL~~sie~eP-l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 260 PLYQSIELEP-LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred hHHHhccCCC-CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 0111 11 100 0011111 34556667788999999999999863
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.9e-13 Score=149.83 Aligned_cols=169 Identities=21% Similarity=0.352 Sum_probs=124.4
Q ss_pred HHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEE
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~ 718 (905)
...++|....++|.|.||.|||++ ...++..|||+++.......+-..+|+-+++..+|+|||.++|-+...+..++.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 345677778899999999999999 5678999999998765555566778999999999999999999998888888888
Q ss_pred c-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 7
Q ss_pred -----CCCChhhhc---cCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCC-CCCCC
Q 002581 720 -----GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP-TLTEF 790 (905)
Q Consensus 720 -----gY~APE~~~---~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-~l~~~ 790 (905)
.|||||++. .+-|.+++|||+.|+.-.|+---.+|.....+.... .++. ...++| .+.+-
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l-------~LmT----kS~~qpp~lkDk 240 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL-------FLMT----KSGFQPPTLKDK 240 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH-------HHhh----ccCCCCCcccCC
Confidence 699999874 577999999999999999998777775433221111 1111 112222 23211
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVV 820 (905)
Q Consensus 791 ~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~ 820 (905)
. .-...+-+++..|+-++|++||++...+
T Consensus 241 ~-kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 241 T-KWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred c-cchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1 1112245566789999999999986554
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-13 Score=151.71 Aligned_cols=129 Identities=27% Similarity=0.450 Sum_probs=78.4
Q ss_pred CCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEE
Q 002581 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154 (905)
Q Consensus 75 l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~ 154 (905)
|..-...||+.|++. .+|..+..+..|+.|.|.+|.|. .+|..+++|..|.+|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444456677777775 66777777777777777777776 66777777777777777777776 5666666554 56666
Q ss_pred ecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCC
Q 002581 155 IDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 155 L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~ 209 (905)
+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 6655554 34555555555555555555443 33444444444444444444443
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.2e-12 Score=133.31 Aligned_cols=164 Identities=20% Similarity=0.290 Sum_probs=117.9
Q ss_pred hcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccC---cccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIAS---HQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~l 716 (905)
..+|+..++||+|+|.+|..+.+. +.+.+|+|+++..- .+...-...|-.+.... .||-+|.|..|+....+.+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467888999999999999999964 57889999997542 22233345676777666 69999999999988888777
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|.|
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~t 408 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT 408 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCccc
Confidence 776
Q ss_pred -------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCC-CccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS-LDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 -------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|+|||.+.+..|...+|.|++||+++||+.||.||+.- ......+.-++..+..-+..+. + +
T Consensus 409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir------i---p 479 (593)
T KOG0695|consen 409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR------I---P 479 (593)
T ss_pred ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc------c---c
Confidence 599999999999999999999999999999999999842 1222233444544444332221 1 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC
Q 002581 792 DKEALRVIGVALLCTQASPMMRP 814 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RP 814 (905)
..-..+...+...-+.+||.+|-
T Consensus 480 rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 480 RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ceeehhhHHHHHHhhcCCcHHhc
Confidence 11112233445566788998885
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-12 Score=130.46 Aligned_cols=180 Identities=18% Similarity=0.270 Sum_probs=118.6
Q ss_pred CCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC---------
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--------- 711 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--------- 711 (905)
+...++-||-|+||.||..+. ++|+.||.|++... .-...+++.+|+++|.-++|.|+...++.-.-.
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 345678999999999999885 47999999998532 223457799999999999999999988754321
Q ss_pred ---------CeeEEEEc---------------------------------------------------------------
Q 002581 712 ---------ARRLLVYD--------------------------------------------------------------- 719 (905)
Q Consensus 712 ---------~~~~lv~e--------------------------------------------------------------- 719 (905)
-.+.+|..
T Consensus 134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 11122211
Q ss_pred --------CCCChhhhccC-CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHH--------HHHhhcCccccc
Q 002581 720 --------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWA--------WNLHENNQSLGL 782 (905)
Q Consensus 720 --------gY~APE~~~~~-~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~ 782 (905)
.|.|||.+++. +|+.+.||||.||++.||+.+|.-|....+-++..++.-. .+..-+|....+
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~ 293 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV 293 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence 69999999985 6999999999999999999988888766655544433211 111112222222
Q ss_pred cC-----CCCC---C--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 002581 783 VD-----PTLT---E--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823 (905)
Q Consensus 783 ~d-----~~l~---~--~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L 823 (905)
++ |.+. . .+...-.+.+.+.+..+..||++|-+..+.+..+
T Consensus 294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 22 1110 0 0111111233344566788999999888877644
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.2e-12 Score=150.09 Aligned_cols=124 Identities=25% Similarity=0.310 Sum_probs=107.2
Q ss_pred CHHHHHHHhcCCCCCCccccccceeEEEEEe-CCCcEEEEEEcccc---CcccHHHHHHHHHHHhhCCCCCcceEEeEEE
Q 002581 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709 (905)
Q Consensus 634 ~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~ 709 (905)
...+++-..++|...++||+|+||.|...+. .+++++|.|+++.. ......-|..|-.+|..-..+-||.|.-.+.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 3456666778999999999999999999996 45889999999753 2233456889999999999999999999999
Q ss_pred eCCeeEEEEc----------------------------------------------------------------------
Q 002581 710 EGARRLLVYD---------------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~~~~~lv~e---------------------------------------------------------------------- 719 (905)
+....|||||
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999998
Q ss_pred ---------------CCCChhhhcc-----CCCCccCceEeechhhHHhHhCCCCCCC
Q 002581 720 ---------------GYLAPEYAMR-----GHLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 ---------------gY~APE~~~~-----~~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
-|++||++.. +.|...+|.||+||++|||+.|..||+.
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 4999999862 6899999999999999999999999984
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-12 Score=124.98 Aligned_cols=176 Identities=18% Similarity=0.261 Sum_probs=120.5
Q ss_pred hcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCC--eeEEE
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGA--RRLLV 717 (905)
Q Consensus 642 t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~--~~~lv 717 (905)
.++|...+.+|+|.|++||.|. ..+.+.++||+++. ...+...+|+++|..++ |||||+|++...+.. ...||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4566677899999999999998 66788999999974 34566889999999998 999999999887643 23455
Q ss_pred Ec------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRV 193 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193 (338)
T ss_pred hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeee
Confidence 54
Q ss_pred ---CCCChhhhcc-CCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc------CccccccCCCCCC
Q 002581 720 ---GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN------NQSLGLVDPTLTE 789 (905)
Q Consensus 720 ---gY~APE~~~~-~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~d~~l~~ 789 (905)
.|--||.+.. ..|+..-|+|||||+|.+|+..|.||....... ..++..+.-.-.+ .+..-.+||...+
T Consensus 194 ASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~ 272 (338)
T KOG0668|consen 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIAKVLGTDELYAYLNKYQIDLDPQFED 272 (338)
T ss_pred ehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHHHHhChHHHHHHHHHHccCCChhHhh
Confidence 3566887765 457888899999999999999999986544332 2233332211000 0001113333211
Q ss_pred ----C------------CHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 790 ----F------------NDK-EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 790 ----~------------~~~-~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
. ... ...+++++.-.-+..|-.+|||++|.+.
T Consensus 273 i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 273 ILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0 000 1134566666788899999999999875
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-13 Score=147.22 Aligned_cols=191 Identities=25% Similarity=0.361 Sum_probs=159.9
Q ss_pred EEEEeccCcccCCCCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccc
Q 002581 55 TKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134 (905)
Q Consensus 55 ~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N 134 (905)
...+++.|.+. .+|..+..+-.|+.|.|+.|.|. .+|..+++|..|.+|||+.|+++ .+|..+..|+ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 44566666654 67888888889999999999997 79999999999999999999999 7899999887 999999999
Q ss_pred cCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCc
Q 002581 135 NFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS 214 (905)
Q Consensus 135 ~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~ 214 (905)
+++ .+|+.++.+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|..++. -.|..||++.|+++ .+|-
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iPv 228 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLPV 228 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecch
Confidence 998 89999999999999999999987 58899999999999999999998 57777774 46999999999998 7999
Q ss_pred cccCCCCCCEEEecCcccCCCChhh--hhCCCcccccccccc
Q 002581 215 SLSKLASLESLRISDIYFVSSSLDF--VMSLKNLKDLSLRNA 254 (905)
Q Consensus 215 ~l~~l~~L~~L~l~~n~~~~~~~~~--~~~l~~L~~L~L~~N 254 (905)
.|.+|+.|++|.|.+|.+.+.+... -+...-.++|+..-+
T Consensus 229 ~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 9999999999999998876543322 122223345555444
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-11 Score=135.99 Aligned_cols=136 Identities=24% Similarity=0.358 Sum_probs=111.3
Q ss_pred CHHHHHHHh---cCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcc---cHHHHHHHHHHHhhCCCCCcceEEe
Q 002581 634 SYAELRSAT---KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQ---GKNQFVNEIATISAVQHRNLVRLYG 706 (905)
Q Consensus 634 ~~~~l~~~t---~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~~~H~niv~l~g 706 (905)
.|-.|++|. .-|...+.||-|+||+|..+. .++...+|.|.|+.++.. ......+|-++|.....+-||+|+-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 344555553 347777899999999999998 455678899999765433 2345778999999999999999999
Q ss_pred EEEeCCeeEEEEc-------------------------------------------------------------------
Q 002581 707 CCIEGARRLLVYD------------------------------------------------------------------- 719 (905)
Q Consensus 707 ~~~~~~~~~lv~e------------------------------------------------------------------- 719 (905)
.+.+.+..|.|||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccc
Confidence 9999999999998
Q ss_pred -----------------------------------------------------------CCCChhhhccCCCCccCceEe
Q 002581 720 -----------------------------------------------------------GYLAPEYAMRGHLTEKADVFS 740 (905)
Q Consensus 720 -----------------------------------------------------------gY~APE~~~~~~~t~k~DVyS 740 (905)
-|||||++....|+.-+|.||
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws 856 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS 856 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence 599999999999999999999
Q ss_pred echhhHHhHhCCCCCCCCCccch-hhHHHH
Q 002581 741 FGVVALEVISGRANSDNSLDTEK-IYLLEW 769 (905)
Q Consensus 741 fGvvLlElltg~~p~~~~~~~~~-~~l~~~ 769 (905)
.||||+||+.|+.||....+.+. ..+..|
T Consensus 857 ~gvil~em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCCcceeeeeeh
Confidence 99999999999999987665543 234444
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-11 Score=144.10 Aligned_cols=113 Identities=24% Similarity=0.506 Sum_probs=99.5
Q ss_pred cccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceeccc
Q 002581 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180 (905)
Q Consensus 101 ~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~ 180 (905)
.++.|+|++|.+.|.+|..+++|++|+.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|..+++|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCc-ccCCeeecccccCCCCCC
Q 002581 181 DAHFTGKIPDFIGNW-TKLTALRLQGNSFQGPIP 213 (905)
Q Consensus 181 ~N~l~~~ip~~~~~l-~~L~~L~L~~N~l~g~~p 213 (905)
+|+++|.+|..++.+ .++..+++.+|......|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999888763 567788898887654443
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.1e-11 Score=127.61 Aligned_cols=79 Identities=25% Similarity=0.463 Sum_probs=66.4
Q ss_pred HHHhcCCCCCCccccccceeEEEEEeC----CCcEEEEEEccccCcccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCe
Q 002581 639 RSATKDFDPSNKLGEGGYGPVYKGTLS----DGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGAR 713 (905)
Q Consensus 639 ~~~t~~f~~~~~iG~G~~g~Vy~g~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~ 713 (905)
....+.|...++||+|.|++||++.+. ..+.||+|.+.... ...+..+|++.|..+. |.||+++.++...++.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 334566788899999999999999853 36789999997543 3456889999999995 8999999999999999
Q ss_pred eEEEEc
Q 002581 714 RLLVYD 719 (905)
Q Consensus 714 ~~lv~e 719 (905)
.++|+|
T Consensus 110 v~ivlp 115 (418)
T KOG1167|consen 110 VAIVLP 115 (418)
T ss_pred eEEEec
Confidence 999988
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.2e-11 Score=136.90 Aligned_cols=194 Identities=35% Similarity=0.510 Sum_probs=86.1
Q ss_pred EEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCC-CccEEEecccCCCCCCchhhhccCccceecccCc
Q 002581 104 LLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLA-KLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182 (905)
Q Consensus 104 ~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~-~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N 182 (905)
.|++..|.+.. ....+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 34455454432 2223344455555555555555 4444444443 5555555555544 23344555555555555555
Q ss_pred cccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCc
Q 002581 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPS 262 (905)
Q Consensus 183 ~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~ 262 (905)
+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|+.|.+++|... ..+..+..+.++..|.+.+|.+.. ++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 554 34443435555556666666554 34444333333444444433210 011122233333333333333321 133
Q ss_pred ccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCcc
Q 002581 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306 (905)
Q Consensus 263 ~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 306 (905)
.++.+++|+.|++++|+++ .++. ++.+.+|+.|++++|.++.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred hhccccccceecccccccc-cccc-ccccCccCEEeccCccccc
Confidence 3444444444444444444 2222 4444444444444444443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3e-11 Score=138.15 Aligned_cols=201 Identities=31% Similarity=0.426 Sum_probs=162.0
Q ss_pred EEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCC-CCCeEecccccCCCCCCccccCCCCccEEEeccc
Q 002581 80 FLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK-ELNLLSLANNNFSGALPPEIGNLAKLEELYIDSC 158 (905)
Q Consensus 80 ~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~-~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n 158 (905)
.|++..|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|+++.|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 58888887743 3344566788999999999988 6777788785 9999999999988 67778899999999999999
Q ss_pred CCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCCChh
Q 002581 159 GASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLD 238 (905)
Q Consensus 159 ~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 238 (905)
+++ .+|...+.+.+|+.|++++|++. .+|..++.+..|++|.+++|... .++..+.++.++..|.+.+|.+... +.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cc
Confidence 987 46666668889999999999987 67776666777999999999543 4677788888888888887765432 45
Q ss_pred hhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCcccc
Q 002581 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289 (905)
Q Consensus 239 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~ 289 (905)
.+..++++++|++++|.++.. +. ++.+.+|+.|++++|.++..+|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhhhc
Confidence 677888899999999999854 43 89999999999999999977776544
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-11 Score=135.49 Aligned_cols=115 Identities=19% Similarity=0.332 Sum_probs=95.3
Q ss_pred cCCCCCCccccccceeEEEEEeCC-CcEEEEEEccccCc--------ccHHHHHHHHHHHhhCC---CCCcceEEeEEEe
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASH--------QGKNQFVNEIATISAVQ---HRNLVRLYGCCIE 710 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~~~-g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~~~---H~niv~l~g~~~~ 710 (905)
.+|...+.+|+|+||.|+.|..+. ...|+||.+....- ...-..-.|+++|+.++ |+||+|++.++.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 357778899999999999999654 56899999864321 01112456999999997 9999999999999
Q ss_pred CCeeEEEEc-----------------------------------------------------------------------
Q 002581 711 GARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 711 ~~~~~lv~e----------------------------------------------------------------------- 719 (905)
.+..+|++|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence 999999998
Q ss_pred ------------CCCChhhhccCCCC-ccCceEeechhhHHhHhCCCCCCC
Q 002581 720 ------------GYLAPEYAMRGHLT-EKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 720 ------------gY~APE~~~~~~~t-~k~DVySfGvvLlElltg~~p~~~ 757 (905)
+|.|||++.+.+|- ..-|+|++||+||-++-..-||+.
T Consensus 721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 79999999988764 557999999999999999888863
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.4e-12 Score=137.96 Aligned_cols=158 Identities=18% Similarity=0.291 Sum_probs=114.2
Q ss_pred CCCCCCccccccceeEEEEEeCCCc-EEEEEEccccC---cccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~-~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
++.....||-||||.|-..+..... .+|.|+++... ....+....|-.+|-..+.+.||+|+-.+.+....|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3444567999999999998876433 48888886542 2334568899999999999999999998888887777777
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc 580 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC 580 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec
Confidence
Q ss_pred ---CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||.+...-.+..+|.||+||+++||+||++||....+....+ .+-.| +|. -+++.....
T Consensus 581 GTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn-------~ILkG-----id~--i~~Pr~I~k 646 (732)
T KOG0614|consen 581 GTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN-------LILKG-----IDK--IEFPRRITK 646 (732)
T ss_pred CCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH-------HHHhh-----hhh--hhcccccch
Confidence 5999999999999999999999999999999999998654322111 11111 110 112222223
Q ss_pred HHHHHHHHhccCCCCCCCC
Q 002581 797 RVIGVALLCTQASPMMRPP 815 (905)
Q Consensus 797 ~~~~l~~~C~~~~P~~RPs 815 (905)
....++.+-+..+|.+|--
T Consensus 647 ~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 647 TATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hHHHHHHHHHhcCcHhhhc
Confidence 3445555666789999964
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.2e-10 Score=116.31 Aligned_cols=172 Identities=19% Similarity=0.227 Sum_probs=115.6
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEcccc--CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeC------Cee
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------ARR 714 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------~~~ 714 (905)
.|....-+|.|.- .|..+. .-.++.||+|++... .....++..+|...+..+.|+|+++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 3444556777776 555554 234789999998532 233456788999999999999999999988643 244
Q ss_pred EEEEc---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 97 y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtp 176 (369)
T KOG0665|consen 97 YLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTP 176 (369)
T ss_pred HHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCc
Confidence 66665
Q ss_pred -----CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCc----------------
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ---------------- 778 (905)
Q Consensus 720 -----gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------- 778 (905)
.|.|||.+.+..+.+++||||.||++.||++|+.-|.+. ..+.+|....-.-|.
T Consensus 177 yVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~-----d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 177 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK-----DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred hhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc-----hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 599999999988999999999999999999999877632 233344221110000
Q ss_pred -----------ccccc-CCCC---CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 779 -----------SLGLV-DPTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 779 -----------~~~~~-d~~l---~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+.+ |... .+.++-....+-.++.+++-.+|++|-+.+++++
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00111 1111 1111112223455778999999999999999886
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-09 Score=120.03 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=71.6
Q ss_pred CCCChhhhccC-------CCCccCceEeechhhHHhHhCCCCCCCCCccch-hhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 GYLAPEYAMRG-------HLTEKADVFSFGVVALEVISGRANSDNSLDTEK-IYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 gY~APE~~~~~-------~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
-|.|||.+... ..+.++|||||||+++|+++++.|++.....+. ..++.++.. .....+.|.+....
T Consensus 116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~ 190 (484)
T KOG1023|consen 116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN 190 (484)
T ss_pred hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh
Confidence 38999998763 257889999999999999999999986433221 223333322 12334555553222
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcC
Q 002581 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~ 826 (905)
+....++.++..||..+|.+||++++|-..++..
T Consensus 191 -e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 191 -ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred -hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 3333578888999999999999999999888743
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.1e-10 Score=121.49 Aligned_cols=209 Identities=21% Similarity=0.242 Sum_probs=122.8
Q ss_pred cCCCCCCEEECCCCCCCCCCc--hhhcCCccccEEecccccCCCCCc--ccccCCCCCCeEecccccCCCCCCcc-ccCC
Q 002581 73 VTLQYLTFLKIDRNFFTGPLP--SFIGNLSRLTLLSLAHNVFSGPVP--RELGNLKELNLLSLANNNFSGALPPE-IGNL 147 (905)
Q Consensus 73 ~~l~~L~~L~Ls~N~l~~~~p--~~~~~L~~L~~L~Ls~N~l~g~ip--~~l~~L~~L~~L~Ls~N~l~~~lP~~-i~~L 147 (905)
++++.|+...|.+..+. ..+ .....|++++.|||++|-|....| .-...|++|+.|+|+.|++.--.-.. -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45778888888877764 222 356678888888888888774322 34567888888888888875222111 1246
Q ss_pred CCccEEEecccCCCCC-CchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEE
Q 002581 148 AKLEELYIDSCGASGE-IPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226 (905)
Q Consensus 148 ~~L~~L~L~~n~l~~~-~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 226 (905)
+.|+.|.|+.|+++.. +-..+..+++|..|+|..|...+.--.....+..|+.|+|++|++-. .+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~------------- 262 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FD------------- 262 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cc-------------
Confidence 6777888888877632 22223456677777777764222222233345566666666666531 22
Q ss_pred ecCcccCCCChhhhhCCCcccccccccccccCC-CCcc-----cCCCCCCCEEeccCCcCCccCC--ccccCCCCCCEEE
Q 002581 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGT-IPSG-----IGELQNLQTLDLSFNNLTGQIP--RTLFNIDSLNYLF 298 (905)
Q Consensus 227 l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~-ip~~-----~~~l~~L~~L~Ls~N~l~g~ip--~~l~~l~~L~~L~ 298 (905)
.......++.|..|+++.+.+... +|+. ...+++|++|+++.|++. ..+ ..+..+.+|+.|.
T Consensus 263 ---------~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 263 ---------QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLR 332 (505)
T ss_pred ---------cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhh
Confidence 112233344444444444444321 2222 245678888888888885 222 2344566777777
Q ss_pred CcCCcCcc
Q 002581 299 LGNNSLSG 306 (905)
Q Consensus 299 Ls~N~l~g 306 (905)
+..|.|+.
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 77887763
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.7e-09 Score=108.38 Aligned_cols=173 Identities=16% Similarity=0.288 Sum_probs=114.0
Q ss_pred cCCCCCCccccccceeEEEEEe-CCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEE-eCCeeEEEEc
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCI-EGARRLLVYD 719 (905)
Q Consensus 643 ~~f~~~~~iG~G~~g~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~-~~~~~~lv~e 719 (905)
+.|++.+.+|+|.||.+-.+.. ++.+.+++|.+... ....++|.+|..-=-.+ .|+|||.-+.+.. ..+..+.++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 4577889999999999999995 45788999998632 33567899998754444 5899997665432 2334444444
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~ 182 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEY 182 (378)
T ss_pred cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhh
Confidence
Q ss_pred --CCCChhhhccC-----CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCH
Q 002581 720 --GYLAPEYAMRG-----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 --gY~APE~~~~~-----~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
-|-|||..... +....+|||.|||+++-++||+.|+......+ -.-|-+..+..+.... +......+.+
T Consensus 183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d---~~Y~~~~~w~~rk~~~-~P~~F~~fs~ 258 (378)
T KOG1345|consen 183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD---KPYWEWEQWLKRKNPA-LPKKFNPFSE 258 (378)
T ss_pred hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC---chHHHHHHHhcccCcc-CchhhcccCH
Confidence 48899977543 45678999999999999999999987432221 1223333333332221 1111123333
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 793 ~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
. ++++-.+-+..+|.+|--..++.++..
T Consensus 259 ~----a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 259 K----ALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred H----HHHHHHHhcCCcccccchhHHHHHHHH
Confidence 2 444455778999999977777776554
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.2e-10 Score=116.27 Aligned_cols=130 Identities=27% Similarity=0.299 Sum_probs=68.2
Q ss_pred CCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEE
Q 002581 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154 (905)
Q Consensus 75 l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~ 154 (905)
.+.|+.|||++|.|+ .+..+..-++.++.|++++|.|.. + ..+..|++|+.||||+|.++ .+-..-.+|-|.+.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 345666666666665 344455555666666666666652 2 22555666666666666655 3333334455555666
Q ss_pred ecccCCCCCCchhhhccCccceecccCccccCC-CCCCCCCcccCCeeecccccCCC
Q 002581 155 IDSCGASGEIPSTFAKLHNMQILRASDAHFTGK-IPDFIGNWTKLTALRLQGNSFQG 210 (905)
Q Consensus 155 L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~-ip~~~~~l~~L~~L~L~~N~l~g 210 (905)
|+.|.+... +.+++|.+|..||+.+|++... --..+|+++-|+.|.|.+|.+.+
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 665554321 3345555555555555555421 12345555555555555555543
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.9e-09 Score=129.48 Aligned_cols=128 Identities=25% Similarity=0.383 Sum_probs=87.5
Q ss_pred eEEEEEeccCcccCCCCccccCCCCCCEEECCCCC--CCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEe
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNF--FTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130 (905)
Q Consensus 53 ~l~~L~l~~~~l~g~ip~~l~~l~~L~~L~Ls~N~--l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~ 130 (905)
.++++.+.+|.+.- ++.. ...+.|++|-+..|. +.......|..++.|++|||++|.--+.+|.++++|-+||+|+
T Consensus 524 ~~rr~s~~~~~~~~-~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEH-IAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhh-ccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 45666666555432 1211 223367777777775 4433344567788888888887776667888888888888888
Q ss_pred cccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCcc
Q 002581 131 LANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAH 183 (905)
Q Consensus 131 Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~ 183 (905)
|++..++ .+|..+++|.+|.+|++..+.....+|..+..|.+|++|.+..-.
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 8888777 778888888888888887776666667777778888887776543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7e-10 Score=127.37 Aligned_cols=218 Identities=26% Similarity=0.331 Sum_probs=121.0
Q ss_pred CCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEE
Q 002581 74 TLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEEL 153 (905)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L 153 (905)
.+..++.++++.|.+.. +-..+..+++|..|++..|.|.. +...+..+++|++|+|++|.|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 45666666777777753 33446677778888888887774 3333667778888888888776432 35566667777
Q ss_pred EecccCCCCCCchhhhccCccceecccCccccCCCC-CCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCccc
Q 002581 154 YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP-DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYF 232 (905)
Q Consensus 154 ~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip-~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~ 232 (905)
++++|.++.. ..+..+.+|+.+++++|.+...-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++.+|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccc
Confidence 7777777642 344456777777777777664333 1 3556667777777776642 22233333333334444443
Q ss_pred CCCChhhhhCCC--cccccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccCCCCCCEEECcCCcCc
Q 002581 233 VSSSLDFVMSLK--NLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305 (905)
Q Consensus 233 ~~~~~~~~~~l~--~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 305 (905)
..... +..+. .|+.+++.+|.+.. ++..+..+..+..|++.+|++...- .+.....+..+.+..|.+.
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 22110 11111 25556666665542 2234445555666666665554321 1223344444445555443
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.5e-09 Score=135.13 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=59.7
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 799 (905)
.|||||++.+..++.++|||||||+||||++|..|+.... ..+..+... .+++.. ........
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~~~~---------~~~~~~----~~~~~~~~ 242 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSLRHR---------VLPPQI----LLNWPKEA 242 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHHHHh---------hcChhh----hhcCHHHH
Confidence 5999999999999999999999999999999988764211 111111100 111111 11122345
Q ss_pred HHHHHhccCCCCCCCCHHHHHH
Q 002581 800 GVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 800 ~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
.++.+|++.+|.+||+|.||++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 6778999999999999999986
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.76 E-value=3e-09 Score=105.48 Aligned_cols=84 Identities=29% Similarity=0.430 Sum_probs=17.8
Q ss_pred cCCCCCCEEECCCCCCCCCCchhhc-CCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccc-cCCCCc
Q 002581 73 VTLQYLTFLKIDRNFFTGPLPSFIG-NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKL 150 (905)
Q Consensus 73 ~~l~~L~~L~Ls~N~l~~~~p~~~~-~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i-~~L~~L 150 (905)
.+...+++|+|++|.|+. + ..++ .+.+|+.|+|++|.|+. + +.+..|++|++|+|++|.++ .+...+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 334445666666666652 2 1233 35566666666666653 2 23555566666666666655 233333 235555
Q ss_pred cEEEecccCCC
Q 002581 151 EELYIDSCGAS 161 (905)
Q Consensus 151 ~~L~L~~n~l~ 161 (905)
++|+|++|++.
T Consensus 91 ~~L~L~~N~I~ 101 (175)
T PF14580_consen 91 QELYLSNNKIS 101 (175)
T ss_dssp -EEE-TTS---
T ss_pred CEEECcCCcCC
Confidence 55555555543
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.6e-10 Score=119.44 Aligned_cols=207 Identities=23% Similarity=0.250 Sum_probs=127.4
Q ss_pred cCCccccEEecccccCCCCCc--ccccCCCCCCeEecccccCCCC--CCccccCCCCccEEEecccCCCCCCchhh-hcc
Q 002581 97 GNLSRLTLLSLAHNVFSGPVP--RELGNLKELNLLSLANNNFSGA--LPPEIGNLAKLEELYIDSCGASGEIPSTF-AKL 171 (905)
Q Consensus 97 ~~L~~L~~L~Ls~N~l~g~ip--~~l~~L~~L~~L~Ls~N~l~~~--lP~~i~~L~~L~~L~L~~n~l~~~~p~~l-~~L 171 (905)
.++.+|+...|.+.... ..+ .-...|++++.||||.|-+..- +-.-...|++|+.|+|+.|.+.-...... ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46788888888877765 333 3566788888888888877631 11224567777777777777653222111 123
Q ss_pred CccceecccCccccCCCCCCCCCcccCCeeecccccCCC-CCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccc
Q 002581 172 HNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLS 250 (905)
Q Consensus 172 ~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 250 (905)
+.|+.|.|+.|.++. .+-..+..+++|+.|++..|............+..|+.|+
T Consensus 197 ------------------------~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~Ld 252 (505)
T KOG3207|consen 197 ------------------------SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELD 252 (505)
T ss_pred ------------------------hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcc
Confidence 444455555554441 1112233445555555555532222222334566788888
Q ss_pred cccccccCCC-CcccCCCCCCCEEeccCCcCCcc-CCcc-----ccCCCCCCEEECcCCcCccCCCC----CCCCCCCEE
Q 002581 251 LRNALITGTI-PSGIGELQNLQTLDLSFNNLTGQ-IPRT-----LFNIDSLNYLFLGNNSLSGTLPT----QKSENLQNI 319 (905)
Q Consensus 251 L~~N~l~~~i-p~~~~~l~~L~~L~Ls~N~l~g~-ip~~-----l~~l~~L~~L~Ls~N~l~g~~p~----~~~~~L~~L 319 (905)
|++|++-..- -.-.+.++.|..|+++.+.+... +|+. ...+++|++|+++.|++.. .+. ..+.+|..|
T Consensus 253 Ls~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~-w~sl~~l~~l~nlk~l 331 (505)
T KOG3207|consen 253 LSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD-WRSLNHLRTLENLKHL 331 (505)
T ss_pred ccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccc-ccccchhhccchhhhh
Confidence 8888775321 13467889999999999988752 3433 3457899999999999963 222 234678888
Q ss_pred EeecCCCCCC
Q 002581 320 DLSYNHLSGP 329 (905)
Q Consensus 320 ~Ls~N~lsg~ 329 (905)
....|.|+-+
T Consensus 332 ~~~~n~ln~e 341 (505)
T KOG3207|consen 332 RITLNYLNKE 341 (505)
T ss_pred hccccccccc
Confidence 8888888743
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-08 Score=124.14 Aligned_cols=254 Identities=20% Similarity=0.221 Sum_probs=165.4
Q ss_pred cCCCCCCEEECCCCCCCCCCchhhcCCccccEEeccccc--CCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCc
Q 002581 73 VTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNV--FSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150 (905)
Q Consensus 73 ~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~--l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L 150 (905)
.+....+...+-+|.+. .++... ..+.|++|-+..|. +.......|..++.|++|||++|.--+.+|..|++|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34466788888888875 344443 34589999999996 554444558889999999999998778999999999999
Q ss_pred cEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCC--CCCCccccCCCCCCEEEec
Q 002581 151 EELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ--GPIPSSLSKLASLESLRIS 228 (905)
Q Consensus 151 ~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~--g~~p~~l~~l~~L~~L~l~ 228 (905)
++|+|+...+. .+|..+++|+.|.+|++..+.....+|.....+.+|++|.+...... ...-..+.++.+|+.|...
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 99999999988 79999999999999999998877777777778999999999775422 2222334445555544443
Q ss_pred CcccCCCChhhhhCCCccc----ccccccccccCCCCcccCCCCCCCEEeccCCcCCccCCccccC------CCCCCEEE
Q 002581 229 DIYFVSSSLDFVMSLKNLK----DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFN------IDSLNYLF 298 (905)
Q Consensus 229 ~n~~~~~~~~~~~~l~~L~----~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~------l~~L~~L~ 298 (905)
.... .....+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++............ ++++..+.
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~ 753 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVS 753 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHH
Confidence 2111 0011122222222 3333332222 34556788899999999988886432222111 11222222
Q ss_pred CcCCc-CccCCCCCCCCCCCEEEeecCCCCCCCCc
Q 002581 299 LGNNS-LSGTLPTQKSENLQNIDLSYNHLSGPFPS 332 (905)
Q Consensus 299 Ls~N~-l~g~~p~~~~~~L~~L~Ls~N~lsg~ip~ 332 (905)
..++. +....+..+.++|+.|.+..+..-..+.+
T Consensus 754 ~~~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~ 788 (889)
T KOG4658|consen 754 ILNCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIP 788 (889)
T ss_pred hhccccccccchhhccCcccEEEEecccccccCCC
Confidence 22221 11112223568999999998776654443
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-09 Score=125.16 Aligned_cols=237 Identities=24% Similarity=0.215 Sum_probs=144.7
Q ss_pred CCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEec
Q 002581 77 YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156 (905)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~ 156 (905)
.++.++...+.+.+.--. ...+..++.+++..|.+.. +-..+..+++|..|++..|++.+ +...+..+++|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecc
Confidence 445566666554322111 1456778888899998874 34558889999999999999984 43337788999999999
Q ss_pred ccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCcc-ccCCCCCCEEEecCcccCCC
Q 002581 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS-LSKLASLESLRISDIYFVSS 235 (905)
Q Consensus 157 ~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~L~~L~l~~n~~~~~ 235 (905)
+|.++... .+..+..|+.|++++|.++.. ..+..+++|+.+++++|.+...-+ . +..+.+|+.+++.+|.+...
T Consensus 127 ~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 127 FNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIREI 201 (414)
T ss_pred cccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhcc
Confidence 99888653 466677788888888888632 345557888888888888864322 1 46666777777776655322
Q ss_pred ChhhhhCCCcccccccccccccCCCCcccCCCCC--CCEEeccCCcCCccCCccccCCCCCCEEECcCCcCccCCCCCCC
Q 002581 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQN--LQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKS 313 (905)
Q Consensus 236 ~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~--L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 313 (905)
..+..+..+..+++..|.++..-+ +..+.. |+.+++++|.+. .++..+..+..+..|++.+|++...-.....
T Consensus 202 --~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~~~ 276 (414)
T KOG0531|consen 202 --EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLERL 276 (414)
T ss_pred --cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccccccc
Confidence 122223334444666666553211 222222 666666666665 3334455556666666666666533222222
Q ss_pred CCCCEEEeecCCC
Q 002581 314 ENLQNIDLSYNHL 326 (905)
Q Consensus 314 ~~L~~L~Ls~N~l 326 (905)
..+..+.+..|.+
T Consensus 277 ~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 277 PKLSELWLNDNKL 289 (414)
T ss_pred chHHHhccCcchh
Confidence 3344444444443
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.7e-10 Score=115.77 Aligned_cols=244 Identities=21% Similarity=0.304 Sum_probs=134.1
Q ss_pred ccCCCCCCEEECCCCCCCC----CCchhhcCCccccEEecccccCCCC----Cccc-------ccCCCCCCeEecccccC
Q 002581 72 LVTLQYLTFLKIDRNFFTG----PLPSFIGNLSRLTLLSLAHNVFSGP----VPRE-------LGNLKELNLLSLANNNF 136 (905)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~----~~p~~~~~L~~L~~L~Ls~N~l~g~----ip~~-------l~~L~~L~~L~Ls~N~l 136 (905)
+-.+..++.|+|++|.|.- .+-..+.+.++|+.-+++. -++|. +|+. +-..++|++||||.|-|
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 4455566667777766642 1334455566666666653 33332 3332 34556778888888877
Q ss_pred CCCCCcc----ccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCC-
Q 002581 137 SGALPPE----IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP- 211 (905)
Q Consensus 137 ~~~lP~~----i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~- 211 (905)
.-.-+.. +..++.|++|+|.+|.+.-.--..++. .|..|. .|+ ..+.-++|+++....|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeecccccccc
Confidence 5443433 345677888888777664221111211 122221 111 122335566666666665421
Q ss_pred ---CCccccCCCCCCEEEecCcccCCCCh----hhhhCCCcccccccccccccCC----CCcccCCCCCCCEEeccCCcC
Q 002581 212 ---IPSSLSKLASLESLRISDIYFVSSSL----DFVMSLKNLKDLSLRNALITGT----IPSGIGELQNLQTLDLSFNNL 280 (905)
Q Consensus 212 ---~p~~l~~l~~L~~L~l~~n~~~~~~~----~~~~~l~~L~~L~L~~N~l~~~----ip~~~~~l~~L~~L~Ls~N~l 280 (905)
+-..|...+.|+.+.+..|.+..... ..+..+++|+.|+|++|.++.. +...+..+++|+.|++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 11224445566667776665543222 2355667777777777776532 233455667788888888777
Q ss_pred CccCCcccc-----CCCCCCEEECcCCcCccCC------CCCCCCCCCEEEeecCCCC
Q 002581 281 TGQIPRTLF-----NIDSLNYLFLGNNSLSGTL------PTQKSENLQNIDLSYNHLS 327 (905)
Q Consensus 281 ~g~ip~~l~-----~l~~L~~L~Ls~N~l~g~~------p~~~~~~L~~L~Ls~N~ls 327 (905)
...--..+. ..++|+.|.|.+|.++..- +-.-.+.|..|+|++|++.
T Consensus 254 ~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 254 ENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 643222221 2567888888888776211 1111367888888888884
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-08 Score=101.60 Aligned_cols=127 Identities=28% Similarity=0.350 Sum_probs=44.8
Q ss_pred hcCCccccEEecccccCCCCCccccc-CCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhh-hccCc
Q 002581 96 IGNLSRLTLLSLAHNVFSGPVPRELG-NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTF-AKLHN 173 (905)
Q Consensus 96 ~~~L~~L~~L~Ls~N~l~g~ip~~l~-~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l-~~L~~ 173 (905)
+.+..++++|+|.+|.|+. + +.++ .|.+|+.|+|++|.++. +. .+..+++|+.|++++|.++. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3466688999999999984 3 3566 58899999999999983 43 57888999999999999985 44444 46889
Q ss_pred cceecccCccccCCC-CCCCCCcccCCeeecccccCCCCCC---ccccCCCCCCEEEe
Q 002581 174 MQILRASDAHFTGKI-PDFIGNWTKLTALRLQGNSFQGPIP---SSLSKLASLESLRI 227 (905)
Q Consensus 174 L~~L~L~~N~l~~~i-p~~~~~l~~L~~L~L~~N~l~g~~p---~~l~~l~~L~~L~l 227 (905)
|+.|++++|++...- -..+..+++|+.|+|.+|.+...-- ..+..+++|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 999999999886421 1345567777777777777653210 12344555555543
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.4e-09 Score=108.03 Aligned_cols=129 Identities=27% Similarity=0.329 Sum_probs=60.2
Q ss_pred cCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccc
Q 002581 171 LHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLS 250 (905)
Q Consensus 171 L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 250 (905)
++.|+.|||++|.++ .+..++.-++.++.|+++.|.+.. + ..+..+.+|+.|||++|.+... ..+-..+.|.++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls~~-~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLAEC-VGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhHhh-hhhHhhhcCEeeee
Confidence 344444555555444 333444444555555555555441 1 2244445555555555443211 11222344555555
Q ss_pred cccccccCCCCcccCCCCCCCEEeccCCcCCcc-CCccccCCCCCCEEECcCCcCc
Q 002581 251 LRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ-IPRTLFNIDSLNYLFLGNNSLS 305 (905)
Q Consensus 251 L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~-ip~~l~~l~~L~~L~Ls~N~l~ 305 (905)
|+.|.+.. -++++++-+|..||+++|++... --..+++++.|+.|.|.+|.+.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 55555432 12345555566666666665421 1234555555555555555554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.4e-09 Score=122.00 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=106.6
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccccC-cccHHHHHHHHHH--HhhCCCCCcceEEeEEEeC---------
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS-HQGKNQFVNEIAT--ISAVQHRNLVRLYGCCIEG--------- 711 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~--l~~~~H~niv~l~g~~~~~--------- 711 (905)
++...+.+|+++|=+|.||+.+.|. |.||++-... ....+.|.++++- ...++|||++++.-+-...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5667889999999999999998887 8899985443 3445666665544 4456899998865432111
Q ss_pred ---------------------------------------------CeeEEEEc---------------------------
Q 002581 712 ---------------------------------------------ARRLLVYD--------------------------- 719 (905)
Q Consensus 712 ---------------------------------------------~~~~lv~e--------------------------- 719 (905)
.+..||.-
T Consensus 103 vkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~f 182 (1431)
T KOG1240|consen 103 VKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTF 182 (1431)
T ss_pred HhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceE
Confidence 12233321
Q ss_pred ---------CCCChhhhccC-----------CCCccCceEeechhhHHhHh-CCCCCCCCCccchhhHHHHHHH-Hh-hc
Q 002581 720 ---------GYLAPEYAMRG-----------HLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWN-LH-EN 776 (905)
Q Consensus 720 ---------gY~APE~~~~~-----------~~t~k~DVySfGvvLlEllt-g~~p~~~~~~~~~~~l~~~~~~-~~-~~ 776 (905)
.|+|||.+... .++.+.|+||.|||+.||++ |+++|+-. .+..+-.. .. .+
T Consensus 183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aYr~~~~~~~e 256 (1431)
T KOG1240|consen 183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAYRSGNADDPE 256 (1431)
T ss_pred EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhHhccCccCHH
Confidence 69999987642 27889999999999999998 56666521 12211100 00 00
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhc
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~ 825 (905)
..++++-|+ .+..+.+.+++.||++|-++.+.++.=.+
T Consensus 257 ~~Le~Ied~-----------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 257 QLLEKIEDV-----------SLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHHHhCcCc-----------cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 011112121 24456678899999999999999987443
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.7e-08 Score=81.11 Aligned_cols=59 Identities=34% Similarity=0.452 Sum_probs=34.6
Q ss_pred CCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEeccccc
Q 002581 77 YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNN 135 (905)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~ 135 (905)
+|++|++++|+|+...+..|.++++|++|+|++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45566666666654444555566666666666666655445555666666666666554
|
... |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-08 Score=111.85 Aligned_cols=72 Identities=24% Similarity=0.574 Sum_probs=57.4
Q ss_pred HHHhcCCCCCCccccccceeEEEEEeC-CCcEEEEEEccccCcc-cHHHHHHHHHHHhhCCCCCcceEEeEEEe
Q 002581 639 RSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCIE 710 (905)
Q Consensus 639 ~~~t~~f~~~~~iG~G~~g~Vy~g~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~~~H~niv~l~g~~~~ 710 (905)
.+-.++|.....+|.|+||+|+.+... ++-.+|||+|...... ...+-++|+..++++.|++++++.-.+..
T Consensus 45 sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~ 118 (516)
T KOG1033|consen 45 SREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE 118 (516)
T ss_pred hhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence 344567888999999999999999854 4558999999765433 45568899999999999999987766543
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.1e-08 Score=79.01 Aligned_cols=61 Identities=30% Similarity=0.432 Sum_probs=41.7
Q ss_pred ccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCC
Q 002581 100 SRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGA 160 (905)
Q Consensus 100 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l 160 (905)
++|++|+|++|+|+...+..|.++++|++|++++|.++...|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4567777777777755556677777777777777777655556667777777777776653
|
... |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.8e-09 Score=109.06 Aligned_cols=242 Identities=21% Similarity=0.273 Sum_probs=145.9
Q ss_pred eeEEEEEeccCcccC----CCCccccCCCCCCEEECCCCCCCC----CCchh-------hcCCccccEEecccccCCCCC
Q 002581 52 CHITKLRVYALNKKG----VIPEELVTLQYLTFLKIDRNFFTG----PLPSF-------IGNLSRLTLLSLAHNVFSGPV 116 (905)
Q Consensus 52 ~~l~~L~l~~~~l~g----~ip~~l~~l~~L~~L~Ls~N~l~~----~~p~~-------~~~L~~L~~L~Ls~N~l~g~i 116 (905)
..++.|++++|.+.- .+...+.+.++|+..++++- ++| .+|.. +-.+++|++||||.|.|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 368999999998743 24556778889999999863 444 24443 456679999999999997554
Q ss_pred ccc----ccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCC----C
Q 002581 117 PRE----LGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK----I 188 (905)
Q Consensus 117 p~~----l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~----i 188 (905)
+.. +..+..|++|.|.+|.+...--..++. .|..|. .++.. +.-.+|+.+...+|++... +
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk~-------~~~~~Lrv~i~~rNrlen~ga~~~ 177 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKKA-------ASKPKLRVFICGRNRLENGGATAL 177 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhcc-------CCCcceEEEEeeccccccccHHHH
Confidence 443 567899999999999875211111111 111111 11111 1122344444444443211 1
Q ss_pred CCCCCCcccCCeeecccccCCCC----CCccccCCCCCCEEEecCcccCCCC----hhhhhCCCcccccccccccccCCC
Q 002581 189 PDFIGNWTKLTALRLQGNSFQGP----IPSSLSKLASLESLRISDIYFVSSS----LDFVMSLKNLKDLSLRNALITGTI 260 (905)
Q Consensus 189 p~~~~~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~l~~n~~~~~~----~~~~~~l~~L~~L~L~~N~l~~~i 260 (905)
-..|...+.|+.+.++.|.+.-. +-..+..+++|+.|+|.+|.++... -..+..+++|+.|++++|.++..-
T Consensus 178 A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~G 257 (382)
T KOG1909|consen 178 AEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEG 257 (382)
T ss_pred HHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccccccc
Confidence 11233345566666666655311 1234566677777777777664321 123556677888888888776432
Q ss_pred Cccc-----CCCCCCCEEeccCCcCCcc----CCccccCCCCCCEEECcCCcCc
Q 002581 261 PSGI-----GELQNLQTLDLSFNNLTGQ----IPRTLFNIDSLNYLFLGNNSLS 305 (905)
Q Consensus 261 p~~~-----~~l~~L~~L~Ls~N~l~g~----ip~~l~~l~~L~~L~Ls~N~l~ 305 (905)
...| ...++|+.|.|.+|.++.. +-..+...+.|..|+|+.|.+.
T Consensus 258 a~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 258 AIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 2111 2368899999999998742 2234456788999999999994
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.1e-06 Score=92.40 Aligned_cols=171 Identities=22% Similarity=0.352 Sum_probs=119.8
Q ss_pred CCCCCccccccceeEEEEEeCCCcEEEEEEccccCcc---cHHHHHHHHHHHhhCCCC-CcceEEeEEEeCCeeEEEEc-
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ---GKNQFVNEIATISAVQHR-NLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~~~H~-niv~l~g~~~~~~~~~lv~e- 719 (905)
|.....||.|+||.||++... ..+|+|.+...... ....|.+|+.+++++.|+ +++++..++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 445678999999999999977 78999999654332 367899999999999988 79999999866655566655
Q ss_pred --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence
Q ss_pred -------------CCCChhhhcc---CCCCccCceEeechhhHHhHhCCCCCCCCCcc-chhhHHHHHHHHhhcCccccc
Q 002581 720 -------------GYLAPEYAMR---GHLTEKADVFSFGVVALEVISGRANSDNSLDT-EKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -------------gY~APE~~~~---~~~t~k~DVySfGvvLlElltg~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~~ 782 (905)
.|+|||...+ ..++...|+||+|++++++++|+.|+...... ......+.+..... . .
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~-~ 234 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT----P-S 234 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC----c-c
Confidence 4999999988 68999999999999999999999996543321 00111111111110 0 0
Q ss_pred cCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 002581 783 VDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 783 ~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~ 822 (905)
...... .........+.++...|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000110 0001122346667788999999999999887764
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1e-06 Score=91.32 Aligned_cols=78 Identities=10% Similarity=0.061 Sum_probs=61.4
Q ss_pred HhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccH---HH------HHHHHHHHhhCCCCCcceEEeEEEeC
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK---NQ------FVNEIATISAVQHRNLVRLYGCCIEG 711 (905)
Q Consensus 641 ~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~---~~------f~~E~~~l~~~~H~niv~l~g~~~~~ 711 (905)
..++|...+++|.|+||.||.... ++..+|||.+........ .. |.+|++.+.+++|++|..+..+....
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357888999999999999999766 567899999975432222 22 68999999999999999999886533
Q ss_pred --------CeeEEEEc
Q 002581 712 --------ARRLLVYD 719 (905)
Q Consensus 712 --------~~~~lv~e 719 (905)
...+||||
T Consensus 108 ~~~~~~~~~~~~lvmE 123 (232)
T PRK10359 108 ERKTLRYAHTYIMLIE 123 (232)
T ss_pred ccccccccCCeEEEEE
Confidence 35788988
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=2e-06 Score=95.88 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=59.5
Q ss_pred HHhcCCCCCCccccccceeEEEEEeC--CCcEEEEEEcccc-----CcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCC
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS--DGRVIAVKQLSIA-----SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA 712 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~--~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~ 712 (905)
...++|...++||+|+||+||+|... +++.||||++... .....+.|.+|+++|.+++|+|+|+.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 44567999999999999999999854 5788899987532 12235569999999999999999953322 24
Q ss_pred eeEEEEc
Q 002581 713 RRLLVYD 719 (905)
Q Consensus 713 ~~~lv~e 719 (905)
..++|||
T Consensus 92 ~~~LVmE 98 (365)
T PRK09188 92 KDGLVRG 98 (365)
T ss_pred CcEEEEE
Confidence 5789996
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.9e-07 Score=107.37 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=61.8
Q ss_pred CCCChhhhccCCCCc-cCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 002581 720 GYLAPEYAMRGHLTE-KADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 798 (905)
Q Consensus 720 gY~APE~~~~~~~t~-k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 798 (905)
.|+|||......|.. ..||||-|||+..|++|+.|+-.....+... ......+.. .+. ............+.
T Consensus 489 pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~~~-~~~-~~~~~~~~~lp~~~ 561 (601)
T KOG0590|consen 489 PYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSDQR-NIF-EGPNRLLSLLPRET 561 (601)
T ss_pred cCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcccccc-ccc-cChHHHHHhchhhH
Confidence 699999999998876 4699999999999999999986544332211 000000000 000 00001111233345
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 002581 799 IGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 799 ~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..++.+.++.+|.+|-||.+|++
T Consensus 562 ~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 562 RIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHHHHHccCChhheecHHHHhh
Confidence 56778899999999999999987
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.1e-06 Score=88.85 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=46.2
Q ss_pred CCCChhhhccC--------CCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCC
Q 002581 720 GYLAPEYAMRG--------HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 gY~APE~~~~~--------~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
+|.+||..... .+|.+.|.|++|+++|.|.+|+.|++........ +| .+....
T Consensus 207 ~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~---~~----------------~f~~C~ 267 (288)
T PF14531_consen 207 AFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADP---EW----------------DFSRCR 267 (288)
T ss_dssp TTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS---GG----------------GGTTSS
T ss_pred ccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccc---cc----------------cchhcC
Confidence 58999977542 5899999999999999999999999854322110 00 122222
Q ss_pred HHHHHHHHHHHHHhccCCCCCC
Q 002581 792 DKEALRVIGVALLCTQASPMMR 813 (905)
Q Consensus 792 ~~~~~~~~~l~~~C~~~~P~~R 813 (905)
+.+..+-.++...++.+|.+|
T Consensus 268 -~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 268 -DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ----HHHHHHHHHHT-SSGGGS
T ss_pred -CcCHHHHHHHHHHccCCcccC
Confidence 333445556678889999887
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.6e-06 Score=90.25 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=57.7
Q ss_pred CCCChhhhccC--C----CCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccccCCCCCCCCHH
Q 002581 720 GYLAPEYAMRG--H----LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 gY~APE~~~~~--~----~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.-||||.+... + --.|+|.|+.|.+-||+++.+-||+... ++.+.. ..++ +..++..++.
T Consensus 416 ~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG---em~L~~---r~Yq--------e~qLPalp~~ 481 (598)
T KOG4158|consen 416 KLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG---EMLLDT---RTYQ--------ESQLPALPSR 481 (598)
T ss_pred eecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc---hheech---hhhh--------hhhCCCCccc
Confidence 36999988643 2 2369999999999999999999998521 111110 0011 1122222333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHh
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 794 ~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~ 824 (905)
+..-+-++...-++.||.+||+..-....|+
T Consensus 482 vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 482 VPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred CChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 3334556677889999999999766555544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.1e-05 Score=85.02 Aligned_cols=174 Identities=14% Similarity=0.152 Sum_probs=113.8
Q ss_pred CCCCCCccccccceeEEEEEeCC--CcEEEEEEccccCcccHHHHHHHHHHHhhCCC----CCcceEEeEE-EeCCeeEE
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQH----RNLVRLYGCC-IEGARRLL 716 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~--g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H----~niv~l~g~~-~~~~~~~l 716 (905)
.|...+.||+|+||.||++.-.+ ...+|+|.-..........+..|+.++..+.+ +++.++++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 78889999999999999999544 35788888765433322368889999988873 5888898888 47778899
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
||+
T Consensus 99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~ 178 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFK 178 (322)
T ss_pred EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccc
Confidence 987
Q ss_pred -----------------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhc
Q 002581 720 -----------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN 776 (905)
Q Consensus 720 -----------------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~ 776 (905)
.|+++....+...+.+.|+||++-++.|++.|..|+......... .-+......
T Consensus 179 ~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~---~~~~~~~~~ 255 (322)
T KOG1164|consen 179 YVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK---SKFEKDPRK 255 (322)
T ss_pred ccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH---HHHHHHhhh
Confidence 233333333445567889999999999999999997543322111 111111110
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhcCcc
Q 002581 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 777 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~~L~~~~~ 828 (905)
..... .....+. .+.++...+-..+..++|.-..+...|+....
T Consensus 256 ----~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 256 ----LLTDR-FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred ----hcccc-ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 01111 1122222 34444445555789999999999888775443
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.9e-07 Score=105.05 Aligned_cols=126 Identities=21% Similarity=0.246 Sum_probs=77.8
Q ss_pred CCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCccceecccCccccCCCCC-CCCCcccCCeeec
Q 002581 125 ELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPD-FIGNWTKLTALRL 203 (905)
Q Consensus 125 ~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~-~~~~l~~L~~L~L 203 (905)
.|.+.+.++|.+. .+-.++.-++.|+.|+|++|++... ..+..|..|++|||++|.+. .+|. ....+. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4566666777765 4555666667777777777776643 25667777777777777766 3333 222333 777777
Q ss_pred ccccCCCCCCccccCCCCCCEEEecCcccCC-CChhhhhCCCccccccccccccc
Q 002581 204 QGNSFQGPIPSSLSKLASLESLRISDIYFVS-SSLDFVMSLKNLKDLSLRNALIT 257 (905)
Q Consensus 204 ~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~N~l~ 257 (905)
++|.++.. ..+.+|.+|+.||+++|-+.. .....++.+..|+.|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77766521 345666777777777765542 23345566667777777777553
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.1e-07 Score=106.06 Aligned_cols=126 Identities=21% Similarity=0.229 Sum_probs=94.2
Q ss_pred CCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCcc-ccCCCCccEEEe
Q 002581 77 YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPE-IGNLAKLEELYI 155 (905)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~-i~~L~~L~~L~L 155 (905)
.|.+.+.++|.+. ....++.-++.|+.|+|++|+++.. ..+..|++|++|||++|.+. .+|.- ...+ +|+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 4667778888876 4566777788999999999998843 37888999999999999987 55542 2233 4889999
Q ss_pred cccCCCCCCchhhhccCccceecccCccccCCCC-CCCCCcccCCeeecccccCC
Q 002581 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP-DFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 156 ~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip-~~~~~l~~L~~L~L~~N~l~ 209 (905)
++|.++.. ..+.+|++|+.||+++|-+.+.-. ..+..|..|..|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 98887643 457888899999999988775321 22456678888888888764
|
|
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.4e-07 Score=94.62 Aligned_cols=220 Identities=23% Similarity=0.243 Sum_probs=128.0
Q ss_pred CCCEEECCCCCCCCCCchhhcCCc--cccEEecccccCCCC-Cccccc-CCCCCCeEecccccCCC-CCCccccCCCCcc
Q 002581 77 YLTFLKIDRNFFTGPLPSFIGNLS--RLTLLSLAHNVFSGP-VPRELG-NLKELNLLSLANNNFSG-ALPPEIGNLAKLE 151 (905)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~L~--~L~~L~Ls~N~l~g~-ip~~l~-~L~~L~~L~Ls~N~l~~-~lP~~i~~L~~L~ 151 (905)
.-+.||+.+-.|. |..++.+. ...++.+........ +.+-+. .=+.||+||||...++. .+-.-+..+++|+
T Consensus 137 lW~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk 213 (419)
T KOG2120|consen 137 LWQTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLK 213 (419)
T ss_pred ceeeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhh
Confidence 3467888776554 55555543 344444443322211 111111 11348888888776652 1122345677888
Q ss_pred EEEecccCCCCCCchhhhccCccceecccCcc-ccCC-CCCCCCCcccCCeeecccccCCCCCCccc-cC-CCCCCEEEe
Q 002581 152 ELYIDSCGASGEIPSTFAKLHNMQILRASDAH-FTGK-IPDFIGNWTKLTALRLQGNSFQGPIPSSL-SK-LASLESLRI 227 (905)
Q Consensus 152 ~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~-ip~~~~~l~~L~~L~L~~N~l~g~~p~~l-~~-l~~L~~L~l 227 (905)
.|.|.++++...+-..+.+-.+|+.|+++.+. ++.. .--.+.+++.|+.|+|+.+.++.+.-..+ .. -++|+.|++
T Consensus 214 ~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNl 293 (419)
T KOG2120|consen 214 NLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNL 293 (419)
T ss_pred hccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhh
Confidence 88888888887777778888888888887653 1110 11124567888888888876654332111 11 135677777
Q ss_pred cCccc--CCCChh-hhhCCCccccccccccc-ccCCCCcccCCCCCCCEEeccCCcCCccCCcc---ccCCCCCCEEECc
Q 002581 228 SDIYF--VSSSLD-FVMSLKNLKDLSLRNAL-ITGTIPSGIGELQNLQTLDLSFNNLTGQIPRT---LFNIDSLNYLFLG 300 (905)
Q Consensus 228 ~~n~~--~~~~~~-~~~~l~~L~~L~L~~N~-l~~~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~---l~~l~~L~~L~Ls 300 (905)
++..- ...... ....+++|..|+|++|. ++...-..|.+++.|++|.|+.|.. .+|.. +...++|.+|++.
T Consensus 294 sG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~ 371 (419)
T KOG2120|consen 294 SGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVF 371 (419)
T ss_pred hhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEec
Confidence 76431 111112 23567788888888764 3333334567788888888887764 45553 4566788888875
Q ss_pred C
Q 002581 301 N 301 (905)
Q Consensus 301 ~ 301 (905)
+
T Consensus 372 g 372 (419)
T KOG2120|consen 372 G 372 (419)
T ss_pred c
Confidence 4
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.2e-06 Score=96.33 Aligned_cols=106 Identities=29% Similarity=0.408 Sum_probs=81.9
Q ss_pred ccccccceeEEEEE----eCCCcEEEEEEccccCcc--cHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc---
Q 002581 650 KLGEGGYGPVYKGT----LSDGRVIAVKQLSIASHQ--GKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~----~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e--- 719 (905)
++|+|.||.|+... .+.|+.+|.|.+..+... .+.....|..++..++ |+.+|++.-.+......+++.+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999998754 234677899988654322 1225667888899997 9999999877766555555443
Q ss_pred -----------------------------------------------------------------------------CCC
Q 002581 720 -----------------------------------------------------------------------------GYL 722 (905)
Q Consensus 720 -----------------------------------------------------------------------------gY~ 722 (905)
-||
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym 160 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR 160 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence 499
Q ss_pred ChhhhccCCCCccCceEeechhhHHhHhCCCCCCC
Q 002581 723 APEYAMRGHLTEKADVFSFGVVALEVISGRANSDN 757 (905)
Q Consensus 723 APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~ 757 (905)
|||... -....+|.|||||+.+||+||-.||..
T Consensus 161 ApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 161 APEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 999998 566789999999999999999999875
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=5.2e-05 Score=78.23 Aligned_cols=66 Identities=17% Similarity=0.297 Sum_probs=52.3
Q ss_pred CCCCCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhC-----CCCCcceEEeEEEeCC
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-----QHRNLVRLYGCCIEGA 712 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-----~H~niv~l~g~~~~~~ 712 (905)
.+....||+|+||.||+ .-.++.. +||++........+++.+|+++++++ .||||++++|++....
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~ 74 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC 74 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC
Confidence 45678999999999996 3334444 79998755444567899999999999 5799999999998764
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.4e-06 Score=84.50 Aligned_cols=86 Identities=24% Similarity=0.281 Sum_probs=45.1
Q ss_pred CCccccEEecccccCCC--CCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCC-CchhhhccCcc
Q 002581 98 NLSRLTLLSLAHNVFSG--PVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGE-IPSTFAKLHNM 174 (905)
Q Consensus 98 ~L~~L~~L~Ls~N~l~g--~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~-~p~~l~~L~~L 174 (905)
.++.++.|||.+|.|+. .+-.-+.+|+.|++|+|+.|.+...|-..-..+.+|+.|.|.+..+.-. ....+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 34566666666666652 2223345666666666666666532221112345666666665555432 22334455556
Q ss_pred ceecccCcc
Q 002581 175 QILRASDAH 183 (905)
Q Consensus 175 ~~L~L~~N~ 183 (905)
+.|.++.|+
T Consensus 149 telHmS~N~ 157 (418)
T KOG2982|consen 149 TELHMSDNS 157 (418)
T ss_pred hhhhhccch
Confidence 666666553
|
|
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.3e-06 Score=85.52 Aligned_cols=210 Identities=19% Similarity=0.280 Sum_probs=110.7
Q ss_pred ccCCCCCCEEECCCCCCCCC----CchhhcCCccccEEecccccCCCC----Cc-------ccccCCCCCCeEecccccC
Q 002581 72 LVTLQYLTFLKIDRNFFTGP----LPSFIGNLSRLTLLSLAHNVFSGP----VP-------RELGNLKELNLLSLANNNF 136 (905)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~----~p~~~~~L~~L~~L~Ls~N~l~g~----ip-------~~l~~L~~L~~L~Ls~N~l 136 (905)
+..+..++.++||+|.|... +...+.+-.+|++.+++.- ++|. ++ +.+-++++|+..+||.|-+
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAf 104 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeecccccc
Confidence 34466677777777777532 2233445566776666542 2332 22 2345677888888888877
Q ss_pred CCCCCcc----ccCCCCccEEEecccCCCCCCchhhh-------------ccCccceecccCccccCCCCC----CCCCc
Q 002581 137 SGALPPE----IGNLAKLEELYIDSCGASGEIPSTFA-------------KLHNMQILRASDAHFTGKIPD----FIGNW 195 (905)
Q Consensus 137 ~~~lP~~----i~~L~~L~~L~L~~n~l~~~~p~~l~-------------~L~~L~~L~L~~N~l~~~ip~----~~~~l 195 (905)
....|+. |.+-+.|.+|.|++|.+--.--.-++ +-+.|+......|++...--. .+..-
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh 184 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESH 184 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhh
Confidence 7666654 34557788888877765321111122 124566666666665421110 11112
Q ss_pred ccCCeeecccccCCCC-----CCccccCCCCCCEEEecCcccCCCCh----hhhhCCCcccccccccccccCCCCcc---
Q 002581 196 TKLTALRLQGNSFQGP-----IPSSLSKLASLESLRISDIYFVSSSL----DFVMSLKNLKDLSLRNALITGTIPSG--- 263 (905)
Q Consensus 196 ~~L~~L~L~~N~l~g~-----~p~~l~~l~~L~~L~l~~n~~~~~~~----~~~~~l~~L~~L~L~~N~l~~~ip~~--- 263 (905)
.+|+.+.+..|.+.-. +-..+..+.+|+.|+|.+|.++.... ..+..++.|+.|.+.+|.++..-...
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~ 264 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLR 264 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHH
Confidence 4666777777755421 01123455667777777766543221 22344555666666666665322111
Q ss_pred -c--CCCCCCCEEeccCCcCCc
Q 002581 264 -I--GELQNLQTLDLSFNNLTG 282 (905)
Q Consensus 264 -~--~~l~~L~~L~Ls~N~l~g 282 (905)
| ...++|+.|-+.+|...+
T Consensus 265 ~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 265 RFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred HhhhhcCCCccccccchhhhcC
Confidence 1 123555555566655554
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=2.4e-06 Score=78.91 Aligned_cols=86 Identities=31% Similarity=0.330 Sum_probs=47.5
Q ss_pred ccCCCCCCEEECCCCCCCCCCchhhc-CCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCc
Q 002581 72 LVTLQYLTFLKIDRNFFTGPLPSFIG-NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150 (905)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~-~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L 150 (905)
+....+|+..+|++|.|.. +|..|. ..+.++.|+|++|.|+ .+|.++..++.|+.|+++.|.+. ..|..|..|.+|
T Consensus 49 l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l 125 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKL 125 (177)
T ss_pred HhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhH
Confidence 3444555556666666653 333332 3345666666666665 45656666666666666666665 455555555555
Q ss_pred cEEEecccCC
Q 002581 151 EELYIDSCGA 160 (905)
Q Consensus 151 ~~L~L~~n~l 160 (905)
..|+...|..
T Consensus 126 ~~Lds~~na~ 135 (177)
T KOG4579|consen 126 DMLDSPENAR 135 (177)
T ss_pred HHhcCCCCcc
Confidence 5555554443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=6e-06 Score=76.28 Aligned_cols=133 Identities=20% Similarity=0.256 Sum_probs=91.6
Q ss_pred CCCEEECCCCCCCCCCchhh---cCCccccEEecccccCCCCCcccccC-CCCCCeEecccccCCCCCCccccCCCCccE
Q 002581 77 YLTFLKIDRNFFTGPLPSFI---GNLSRLTLLSLAHNVFSGPVPRELGN-LKELNLLSLANNNFSGALPPEIGNLAKLEE 152 (905)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~---~~L~~L~~L~Ls~N~l~g~ip~~l~~-L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~ 152 (905)
.+..+||+.+.+. .+++.. .....|...+|++|.+. ..|+.|.. .+.+++|+|++|.++ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3556778877764 455544 44556677799999988 56666554 457889999999988 78888999999999
Q ss_pred EEecccCCCCCCchhhhccCccceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCc
Q 002581 153 LYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS 214 (905)
Q Consensus 153 L~L~~n~l~~~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~ 214 (905)
|+++.|.+.. .|..+..|.+|-.|+..+|... .||-.+---+..-..++.++.+.+.-+.
T Consensus 105 lNl~~N~l~~-~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 105 LNLRFNPLNA-EPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred cccccCcccc-chHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 9999998874 5677777888999998888765 4443322222223334455566554443
|
|
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.6e-06 Score=83.05 Aligned_cols=217 Identities=23% Similarity=0.295 Sum_probs=128.2
Q ss_pred hcCCccccEEecccccCCCC----CcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhcc
Q 002581 96 IGNLSRLTLLSLAHNVFSGP----VPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKL 171 (905)
Q Consensus 96 ~~~L~~L~~L~Ls~N~l~g~----ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L 171 (905)
+.-+..++.++||+|.|... +...|.+-.+|+..+++.- ++|..-+.+. .+|+ .+-..+.+|
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~--~~L~-----------~Ll~aLlkc 91 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELY--SNLV-----------MLLKALLKC 91 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHH--HHHH-----------HHHHHHhcC
Confidence 33466777777777777643 2233444556666665542 2222111110 0000 011234456
Q ss_pred CccceecccCccccCCCCCCC----CCcccCCeeecccccCCCCCC-c-------------cccCCCCCCEEEecCcccC
Q 002581 172 HNMQILRASDAHFTGKIPDFI----GNWTKLTALRLQGNSFQGPIP-S-------------SLSKLASLESLRISDIYFV 233 (905)
Q Consensus 172 ~~L~~L~L~~N~l~~~ip~~~----~~l~~L~~L~L~~N~l~g~~p-~-------------~l~~l~~L~~L~l~~n~~~ 233 (905)
++|+..+|++|.|....|..+ +.-+.|.+|.|++|.+. .+- . -..+-+.|+......|++.
T Consensus 92 p~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 92 PRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 666666666666665555433 34466777777777653 211 1 1234567888888888877
Q ss_pred CCChhh----hhCCCcccccccccccccCCCCcc--------cCCCCCCCEEeccCCcCCccCC----ccccCCCCCCEE
Q 002581 234 SSSLDF----VMSLKNLKDLSLRNALITGTIPSG--------IGELQNLQTLDLSFNNLTGQIP----RTLFNIDSLNYL 297 (905)
Q Consensus 234 ~~~~~~----~~~l~~L~~L~L~~N~l~~~ip~~--------~~~l~~L~~L~Ls~N~l~g~ip----~~l~~l~~L~~L 297 (905)
.++... +..-.+|+.+.+..|.|. |.+ +.-+.+|+.|||..|-++-.-. ..+..++.|+.|
T Consensus 171 ngs~~~~a~~l~sh~~lk~vki~qNgIr---pegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 171 NGSKELSAALLESHENLKEVKIQQNGIR---PEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred cCcHHHHHHHHHhhcCceeEEeeecCcC---cchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 665432 333467888888888765 442 3456899999999999874322 345567889999
Q ss_pred ECcCCcCccCCCC--------CCCCCCCEEEeecCCCCCCC
Q 002581 298 FLGNNSLSGTLPT--------QKSENLQNIDLSYNHLSGPF 330 (905)
Q Consensus 298 ~Ls~N~l~g~~p~--------~~~~~L~~L~Ls~N~lsg~i 330 (905)
.+..|-++..-.. ...++|..|-..+|...|.+
T Consensus 248 ~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~ 288 (388)
T COG5238 248 RLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGI 288 (388)
T ss_pred cccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCce
Confidence 9999988732211 22468888888888876543
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00011 Score=81.71 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=17.7
Q ss_pred CCCCEEeccCCcCCccCCccccCCCCCCEEECcCC
Q 002581 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302 (905)
Q Consensus 268 ~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 302 (905)
++|++|++++|... .+|..+. .+|+.|.+++|
T Consensus 156 sSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 156 PSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred CcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 35666666666544 2333332 46667776665
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=7.2e-05 Score=76.18 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=48.9
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEccccCc--cc-------HHHH-----------------HHHHHHHhhCCCCCc
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH--QG-------KNQF-----------------VNEIATISAVQHRNL 701 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~--~~-------~~~f-----------------~~E~~~l~~~~H~ni 701 (905)
...||+|+||.||+|..++|+.||||+++.... .. ...| .+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999988899999999964321 11 1122 349999999988876
Q ss_pred ceEEeEEEeCCeeEEEEc
Q 002581 702 VRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 702 v~l~g~~~~~~~~~lv~e 719 (905)
.....+. ....++|||
T Consensus 82 ~~p~~~~--~~~~~iVmE 97 (190)
T cd05147 82 PCPEPIL--LKSHVLVME 97 (190)
T ss_pred CCCcEEE--ecCCEEEEE
Confidence 4433322 223478885
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.52 E-value=8e-05 Score=55.95 Aligned_cols=35 Identities=43% Similarity=0.611 Sum_probs=14.0
Q ss_pred ccEEecccccCCCCCcccccCCCCCCeEecccccCC
Q 002581 102 LTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFS 137 (905)
Q Consensus 102 L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~ 137 (905)
|++|+|++|.|+ .+|..|++|++|++|++++|+++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 444444444444 23333444444444444444443
|
... |
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00027 Score=78.86 Aligned_cols=135 Identities=20% Similarity=0.242 Sum_probs=79.7
Q ss_pred ccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccc-cCCCCCCccccCCCCc
Q 002581 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN-NFSGALPPEIGNLAKL 150 (905)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N-~l~~~lP~~i~~L~~L 150 (905)
+..+.+++.|++++|.++ .+|. --.+|+.|.++++.-...+|..+. ++|++|++++| .+. .+|.. |
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP~s------L 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLPES------V 114 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-ccccc------c
Confidence 445678888888888776 4552 123688888877443346666552 57888888887 444 56653 5
Q ss_pred cEEEecccCC--CCCCchhhhccCccceecccCcccc--CCCCCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEE
Q 002581 151 EELYIDSCGA--SGEIPSTFAKLHNMQILRASDAHFT--GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226 (905)
Q Consensus 151 ~~L~L~~n~l--~~~~p~~l~~L~~L~~L~L~~N~l~--~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 226 (905)
+.|++..+.. .+.+|.. |+.|.+.+++.. ..+|.. --++|++|++++|... .+|..+. .+|+.|.
T Consensus 115 e~L~L~~n~~~~L~~LPss------Lk~L~I~~~n~~~~~~lp~~--LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ 183 (426)
T PRK15386 115 RSLEIKGSATDSIKNVPNG------LTSLSINSYNPENQARIDNL--ISPSLKTLSLTGCSNI-ILPEKLP--ESLQSIT 183 (426)
T ss_pred ceEEeCCCCCcccccCcch------Hhheeccccccccccccccc--cCCcccEEEecCCCcc-cCccccc--ccCcEEE
Confidence 6666665543 2345543 445555332211 111111 1157888998887755 3444333 4788888
Q ss_pred ecCc
Q 002581 227 ISDI 230 (905)
Q Consensus 227 l~~n 230 (905)
++.+
T Consensus 184 ls~n 187 (426)
T PRK15386 184 LHIE 187 (426)
T ss_pred eccc
Confidence 8765
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.47 E-value=8.5e-05 Score=75.08 Aligned_cols=83 Identities=24% Similarity=0.364 Sum_probs=63.6
Q ss_pred CHHHHHHHhcCCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCC-CCcceEEeEEEeC
Q 002581 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQH-RNLVRLYGCCIEG 711 (905)
Q Consensus 634 ~~~~l~~~t~~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H-~niv~l~g~~~~~ 711 (905)
+.+++..+ ..|...+.||.|+||.+|.|. +.+|+.||||.=+... ..-....|.++.+.++| ..|..+.-|..+.
T Consensus 7 s~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~ 83 (341)
T KOG1163|consen 7 SLEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEK 83 (341)
T ss_pred chhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccc
Confidence 34444433 467788999999999999998 7889999999864322 22346788888888875 5677777788888
Q ss_pred CeeEEEEc
Q 002581 712 ARRLLVYD 719 (905)
Q Consensus 712 ~~~~lv~e 719 (905)
....||||
T Consensus 84 ~ynvlVMd 91 (341)
T KOG1163|consen 84 DYNVLVMD 91 (341)
T ss_pred ccceeeee
Confidence 89999998
|
|
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.44 E-value=1.9e-06 Score=89.20 Aligned_cols=176 Identities=19% Similarity=0.238 Sum_probs=103.4
Q ss_pred cccEEecccccCCC-CCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccC-CCCC-CchhhhccCcccee
Q 002581 101 RLTLLSLAHNVFSG-PVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCG-ASGE-IPSTFAKLHNMQIL 177 (905)
Q Consensus 101 ~L~~L~Ls~N~l~g-~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~-l~~~-~p~~l~~L~~L~~L 177 (905)
.|++|||+...|+- .+-.-+..+.+|+-|.|.++++...+-..+.+-.+|+.|+|+.+. ++.. ..--+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 46666666555542 122234555666666666666665555556666666666666543 1110 11124566666666
Q ss_pred cccCccccCCCCCC-CCC-cccCCeeecccccC---CCCCCccccCCCCCCEEEecCccc-CCCChhhhhCCCccccccc
Q 002581 178 RASDAHFTGKIPDF-IGN-WTKLTALRLQGNSF---QGPIPSSLSKLASLESLRISDIYF-VSSSLDFVMSLKNLKDLSL 251 (905)
Q Consensus 178 ~L~~N~l~~~ip~~-~~~-l~~L~~L~L~~N~l---~g~~p~~l~~l~~L~~L~l~~n~~-~~~~~~~~~~l~~L~~L~L 251 (905)
+++-+.+...+-.. +.. -.+|..|+|++..- ...+..--..+++|.+|||+++.. .......|..++.|++|.|
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 66666554332111 111 14677777776421 111112234678999999998753 3444567888999999999
Q ss_pred ccccccCCCCcc---cCCCCCCCEEeccCC
Q 002581 252 RNALITGTIPSG---IGELQNLQTLDLSFN 278 (905)
Q Consensus 252 ~~N~l~~~ip~~---~~~l~~L~~L~Ls~N 278 (905)
+.|+. .+|.. +...++|.+||..++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 99874 56653 567789999998754
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00034 Score=71.30 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=50.9
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEccccCcc--c------------------------HHHHHHHHHHHhhCCCCCc
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ--G------------------------KNQFVNEIATISAVQHRNL 701 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~--~------------------------~~~f~~E~~~l~~~~H~ni 701 (905)
...||+|+||.||+|+..+|+.||||+++..... . ...+.+|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999998743210 0 1124679999999999987
Q ss_pred ceEEeEEEeCCeeEEEEc
Q 002581 702 VRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 702 v~l~g~~~~~~~~~lv~e 719 (905)
.....+... ..+||||
T Consensus 82 ~~p~~~~~~--~~~lVmE 97 (190)
T cd05145 82 PVPEPILLK--KNVLVME 97 (190)
T ss_pred CCceEEEec--CCEEEEE
Confidence 554444332 2478884
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00014 Score=54.58 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=31.7
Q ss_pred CCCCEEECCCCCCCCCCchhhcCCccccEEecccccCC
Q 002581 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFS 113 (905)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 113 (905)
++|++|+|++|+|+ .+|..+++|++|++|+|++|.|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 47899999999998 57878999999999999999988
|
... |
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.38 E-value=5.9e-05 Score=78.40 Aligned_cols=211 Identities=21% Similarity=0.258 Sum_probs=111.9
Q ss_pred CccccEEecccccCCCCC-ccccc-CCCCCCeEecccccCCC--CCCccccCCCCccEEEecccCCCCCCchhhhccCcc
Q 002581 99 LSRLTLLSLAHNVFSGPV-PRELG-NLKELNLLSLANNNFSG--ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNM 174 (905)
Q Consensus 99 L~~L~~L~Ls~N~l~g~i-p~~l~-~L~~L~~L~Ls~N~l~~--~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L 174 (905)
+.-++.|-+.++.|...- -..|+ ..+.++.|||.+|.++. ++-.-+.+|+.|+.|+|+.|.+...|-..-.-+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 334555555555544211 11232 35678888888888762 222234577788888888887765443222345566
Q ss_pred ceecccCccccCCC-CCCCCCcccCCeeecccccCCCCCCccccCCCCCCEEEecCcccCCCC--hhhhhCCCccccccc
Q 002581 175 QILRASDAHFTGKI-PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSS--LDFVMSLKNLKDLSL 251 (905)
Q Consensus 175 ~~L~L~~N~l~~~i-p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~l~~n~~~~~~--~~~~~~l~~L~~L~L 251 (905)
+.|-|.+..+.-.- -..+..++.++.|+++.|++. .+.+.++...... .-.+...+.+..+++
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~ 189 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWL 189 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHH
Confidence 66666665554322 223345566666666666432 1112222111111 011223445556666
Q ss_pred ccccccCCCCcccCCCCCCCEEeccCCcCCccC-CccccCCCCCCEEECcCCcCccCCCC---CCCCCCCEEEeecCCCC
Q 002581 252 RNALITGTIPSGIGELQNLQTLDLSFNNLTGQI-PRTLFNIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLS 327 (905)
Q Consensus 252 ~~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~g~i-p~~l~~l~~L~~L~Ls~N~l~g~~p~---~~~~~L~~L~Ls~N~ls 327 (905)
.-|++...+ +++..+-+..|.+...- -.....++.+..|+|+.|++...-.. ..++.|..|.+++|.|.
T Consensus 190 ~~~~l~r~F-------pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 190 NKNKLSRIF-------PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred HHHhHHhhc-------ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 666665433 45666667777654221 12334456666788888887632211 22467888888888776
Q ss_pred CCC
Q 002581 328 GPF 330 (905)
Q Consensus 328 g~i 330 (905)
..+
T Consensus 263 d~l 265 (418)
T KOG2982|consen 263 DPL 265 (418)
T ss_pred ccc
Confidence 543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=6e-05 Score=90.56 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=39.6
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccc
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTE 762 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~ 762 (905)
.|+|||++...-|...+|.|+.|++++|.+-|+.||+...+++
T Consensus 223 eyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee 265 (1205)
T KOG0606|consen 223 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 265 (1205)
T ss_pred cccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH
Confidence 5999999999999999999999999999999999999776544
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00039 Score=71.92 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=56.4
Q ss_pred CccccccceeEEEEEeCCCcEEEEEEccccCcc--------cHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ--------GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 649 ~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
+.||+|++|.||+|.. +|..|+||+....... ...++.+|++++..++|++++....++...+..++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5799999999999987 5678999986532211 13468899999999999999888888877788889995
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00063 Score=81.04 Aligned_cols=79 Identities=11% Similarity=0.152 Sum_probs=58.9
Q ss_pred HHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEc-ccc-C------cccHHHHHHHHHHHhhCCCCCcceEEeEEEeC
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQL-SIA-S------HQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711 (905)
Q Consensus 640 ~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l-~~~-~------~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~ 711 (905)
.....|...+.||+|+||+||+|.+.+.. +++|+. ... . ....+++.+|++++.+++|++++....++...
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 33455567899999999999999976543 444432 211 1 11235689999999999999999988888888
Q ss_pred CeeEEEEc
Q 002581 712 ARRLLVYD 719 (905)
Q Consensus 712 ~~~~lv~e 719 (905)
...++|||
T Consensus 409 ~~~~lv~E 416 (535)
T PRK09605 409 EEKTIVME 416 (535)
T ss_pred CCCEEEEE
Confidence 88899996
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00076 Score=69.07 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=52.8
Q ss_pred ccccccceeEEEEEeCCCcEEEEEEccccCc--------ccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASH--------QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 650 ~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.||+|+||.||+|.+ +|..|+||+...... ...+++.+|++++.+++|+++.....++......++|+|
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence 489999999999996 568899998643211 113568899999999999887666666666777788985
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0012 Score=67.66 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=55.4
Q ss_pred HHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccccCc----------------------ccHHHHHHHHHHHh
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH----------------------QGKNQFVNEIATIS 694 (905)
Q Consensus 637 ~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~----------------------~~~~~f~~E~~~l~ 694 (905)
++...-..|...+.||+|+||.||+|..++|+.||||++..... .....+.+|...+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 44443334667899999999999999988899999998753210 01123678899999
Q ss_pred hCCCC--CcceEEeEEEeCCeeEEEEc
Q 002581 695 AVQHR--NLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 695 ~~~H~--niv~l~g~~~~~~~~~lv~e 719 (905)
++.|+ .+.+.++. ...++|||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e 111 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVME 111 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEE
Confidence 99887 45555543 34578885
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00046 Score=69.07 Aligned_cols=114 Identities=43% Similarity=0.725 Sum_probs=70.2
Q ss_pred ccCCCChhhhhccccCCCccccccccccCCCceEEEeeeeecccCCCccccccccceEEEEEecceeecccccchhhhCC
Q 002581 439 MTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGG 518 (905)
Q Consensus 439 ~~g~ip~~l~~~~~l~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~l~~~~~~~~~g~ 518 (905)
..+..+..|+++.|..+.++++.--++.+|.|++.|+|+++.+- .+......|.|+||++++|...+++||+....|+
T Consensus 50 i~~t~d~~Lyqt~R~g~~~f~Y~ip~~~~G~Y~V~L~FaE~~~~--~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~ 127 (174)
T PF11721_consen 50 IPGTTDDPLYQTERYGPSSFSYDIPVVPNGTYTVRLHFAELYFG--ASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGG 127 (174)
T ss_dssp TS-HHHHHTTT-----SSSEEEEEE--S-EEEEEEEEEE-SSS----------SSSS-EEEEETTEEEEEEE-HHHHHSS
T ss_pred ccCCCchhhhHhhcCCCCceEEEEecCCCcEEEEEEEecccccc--ccccccCCCceEEEEEecceEEEeccCHHHHcCC
Confidence 34455568888888776667655445789999999999998652 2344556789999999999999999999999887
Q ss_pred CCceeeece-eeeeecCceEEEeecCCCCccccCCCC
Q 002581 519 PNRAIIKNF-NAAVSENHLEIHLLWAGKGTCCVPTQG 554 (905)
Q Consensus 519 ~~~~~~~~~-~~~~s~n~l~~~~~~~~~~~~~~~~~~ 554 (905)
.-......+ .+.++++.|...+.+.+++.|+++..+
T Consensus 128 ~~~~~~~~~~~v~v~dg~L~i~f~~~~~~~~~i~~~~ 164 (174)
T PF11721_consen 128 FNKAAVRRFFNVTVTDGTLNIQFVWAGKGTLCIPFIG 164 (174)
T ss_dssp SS---EEEEEEEEEETTEEETTEEEE--SEEEEEEES
T ss_pred CceEEEEEEEEEEEeCCcEEEEEEecCCCcEEeeccc
Confidence 553444444 778888888888887888888877543
|
It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A. |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=64.19 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=50.8
Q ss_pred CCCCCccccccceeEEEEEeCCCcEEEEEEccccCc----ccHHHHHHHHHHHhhCC-CCCcceEEeEEEeCCeeEEEEc
Q 002581 645 FDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH----QGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~~lv~e 719 (905)
+.....|++|+||+||.+.- ++..++.+.+..... .....|.+|+++|.++. |+++++++++ ...++++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34567899999999997665 577888888764322 11235889999999995 5889999886 23456655
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0023 Score=61.43 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=58.0
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCC--CCcceEEeEEEeCCeeEEEEc
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQH--RNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H--~niv~l~g~~~~~~~~~lv~e 719 (905)
.+.||+|.++.||++...+ ..++||....... ..+|.+|+.++.+++| .++++++++....+..++++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e 73 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME 73 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence 4679999999999999865 7899999864433 5679999999999987 599999998887788888985
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.00087 Score=76.79 Aligned_cols=161 Identities=24% Similarity=0.271 Sum_probs=106.6
Q ss_pred CCCCCcccc--ccceeEEEEEe---CCCcEEEEEEccc--cCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEE
Q 002581 645 FDPSNKLGE--GGYGPVYKGTL---SDGRVIAVKQLSI--ASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 645 f~~~~~iG~--G~~g~Vy~g~~---~~g~~vAvK~l~~--~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~l 716 (905)
|.....+|. |.+|.||++.. .++..+|+|+-+. .......+=++|+....++ .|+|.|+....+..++..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 455678899 99999999986 4678899998532 2223333446788888888 49999997777777776666
Q ss_pred EEc-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
-.|
T Consensus 196 qtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~ 275 (524)
T KOG0601|consen 196 QTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISD 275 (524)
T ss_pred eeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccC
Confidence 665
Q ss_pred -----------------CCCChhhhccCCCCccCceEeechhhHHhHhCCCCCCCCCccchhhHHHHHHHHhhcCccccc
Q 002581 720 -----------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -----------------gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 782 (905)
.|+|||... +.++.++|+||+|.|.+|..++-...-..... .|.. ....
T Consensus 276 ~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~------~W~~-------~r~~ 341 (524)
T KOG0601|consen 276 GNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS------SWSQ-------LRQG 341 (524)
T ss_pred CccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC------Cccc-------cccc
Confidence 499999774 57888999999999999999987664432111 1211 0001
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 002581 783 VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPsm~ev~~ 821 (905)
..+ .++...-..++.......++.+|..|++.+.+..
T Consensus 342 ~ip--~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 342 YIP--LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cCc--hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 100 0111111112223556778999999998877664
|
|
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.00055 Score=82.61 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=68.4
Q ss_pred ccccEEecccccCCC-CCccccc-CCCCCCeEecccccCCC-CCCccccCCCCccEEEecccCCCCCCchhhhccCccce
Q 002581 100 SRLTLLSLAHNVFSG-PVPRELG-NLKELNLLSLANNNFSG-ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQI 176 (905)
Q Consensus 100 ~~L~~L~Ls~N~l~g-~ip~~l~-~L~~L~~L~Ls~N~l~~-~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~ 176 (905)
.+|++|++++...-. .-|..++ -||+|+.|.+++=.+.. ..-.-..++++|..||+++.+++-. ..+++|++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 456666666543221 1122233 35666666666544321 1112234556666666666665533 45666666666
Q ss_pred ecccCccccC-CCCCCCCCcccCCeeecccccCCCCC--C----ccccCCCCCCEEEecCcccC
Q 002581 177 LRASDAHFTG-KIPDFIGNWTKLTALRLQGNSFQGPI--P----SSLSKLASLESLRISDIYFV 233 (905)
Q Consensus 177 L~L~~N~l~~-~ip~~~~~l~~L~~L~L~~N~l~g~~--p----~~l~~l~~L~~L~l~~n~~~ 233 (905)
|.+.+-.+.. ..-..+.+|++|+.||+|........ . +.-..|++|+.||.++..+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 6665544432 11123455677777777765443211 1 12234778899988865543
|
|
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.00049 Score=83.04 Aligned_cols=144 Identities=22% Similarity=0.249 Sum_probs=90.5
Q ss_pred CCCCeEecccccC-CCCCCccccC-CCCccEEEecccCCCC-CCchhhhccCccceecccCccccCCCCCCCCCcccCCe
Q 002581 124 KELNLLSLANNNF-SGALPPEIGN-LAKLEELYIDSCGASG-EIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTA 200 (905)
Q Consensus 124 ~~L~~L~Ls~N~l-~~~lP~~i~~-L~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~L~~N~l~~~ip~~~~~l~~L~~ 200 (905)
.+|++||+++... +...|..++. ||+|+.|.+.+=.+.. .+-.-..++++|..||+++.+++.. ..+++|++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 5799999988653 3344555554 7899999887655432 2223345678888888888877643 56778888888
Q ss_pred eecccccCCC-CCCccccCCCCCCEEEecCcccCCCChhhhhCCCcccccccccccccCCCCcccCCCCCCCEEeccCCc
Q 002581 201 LRLQGNSFQG-PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNN 279 (905)
Q Consensus 201 L~L~~N~l~g-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 279 (905)
|.+.+=.+.. ..-..+.+|++|+.||+|........ ++...++ +.-..|++|+.||.|+..
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~--------~ii~qYl----------ec~~~LpeLrfLDcSgTd 261 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDT--------KIIEQYL----------ECGMVLPELRFLDCSGTD 261 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccch--------HHHHHHH----------HhcccCccccEEecCCcc
Confidence 8887655542 22235677888888888765433221 0111111 112347789999999888
Q ss_pred CCccCCcc
Q 002581 280 LTGQIPRT 287 (905)
Q Consensus 280 l~g~ip~~ 287 (905)
+.+.+-+.
T Consensus 262 i~~~~le~ 269 (699)
T KOG3665|consen 262 INEEILEE 269 (699)
T ss_pred hhHHHHHH
Confidence 77654443
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0019 Score=64.09 Aligned_cols=36 Identities=33% Similarity=0.348 Sum_probs=17.9
Q ss_pred CcccCCeeecccccCCCCC---CccccCCCCCCEEEecC
Q 002581 194 NWTKLTALRLQGNSFQGPI---PSSLSKLASLESLRISD 229 (905)
Q Consensus 194 ~l~~L~~L~L~~N~l~g~~---p~~l~~l~~L~~L~l~~ 229 (905)
.|++|++|.+-+|..+..- --.+..+++|+.||+..
T Consensus 111 ~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 111 SCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 3445555555555443211 11345566677776654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0029 Score=66.76 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=51.0
Q ss_pred CCCCCccccccceeEEEEE--eCCCcEEEEEEccccCcc------------------------cHHHHHHHHHHHhhCCC
Q 002581 645 FDPSNKLGEGGYGPVYKGT--LSDGRVIAVKQLSIASHQ------------------------GKNQFVNEIATISAVQH 698 (905)
Q Consensus 645 f~~~~~iG~G~~g~Vy~g~--~~~g~~vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~~~H 698 (905)
|...+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|++.+.++.|
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5667889999999999998 668999999998643210 01236789999999976
Q ss_pred C--CcceEEeEEEeCCeeEEEEc
Q 002581 699 R--NLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 699 ~--niv~l~g~~~~~~~~~lv~e 719 (905)
. .+.+.+++ ...++|||
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E 128 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVME 128 (237)
T ss_pred cCCCCCeeeEe----cCceEEEE
Confidence 3 34455543 23579995
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0008 Score=69.49 Aligned_cols=41 Identities=24% Similarity=0.290 Sum_probs=19.6
Q ss_pred cCCCCCCeEecccc--cCCCCCCccccCCCCccEEEecccCCC
Q 002581 121 GNLKELNLLSLANN--NFSGALPPEIGNLAKLEELYIDSCGAS 161 (905)
Q Consensus 121 ~~L~~L~~L~Ls~N--~l~~~lP~~i~~L~~L~~L~L~~n~l~ 161 (905)
-.|++|+.|++|.| ++.+.++.-..++++|++|+|++|++.
T Consensus 62 P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 62 PKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred CCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 34445555555555 344444444444455555555555443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0018 Score=68.77 Aligned_cols=74 Identities=26% Similarity=0.420 Sum_probs=54.1
Q ss_pred CCCCCCccccccceeEEEEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhC-CCCCcceEEeEEEeCCeeEEEEc
Q 002581 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~lv~e 719 (905)
+|...++||+|.||+.+.|+ +-+++.||||.=...+.. -+...|-++.+-+ ..+.|...+-|-.++...+||+|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 46678999999999999999 667899999986443322 2344555555555 45778777777777777888877
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0014 Score=67.77 Aligned_cols=90 Identities=20% Similarity=0.219 Sum_probs=57.9
Q ss_pred CCccccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccc--cCCCCCcccccCCCCCCeEecccccCCCCCCcc--
Q 002581 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--VFSGPVPRELGNLKELNLLSLANNNFSGALPPE-- 143 (905)
Q Consensus 68 ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N--~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~-- 143 (905)
+..-.-.+..|+.|.+.+..++.. ..|-.|++|++|.++.| ++++.++....++++|++|+|+.|++. ++.+
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~--~lstl~ 110 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK--DLSTLR 110 (260)
T ss_pred cccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc--cccccc
Confidence 433334445555666655555421 23456788999999999 777767666777799999999999886 2333
Q ss_pred -ccCCCCccEEEecccCCC
Q 002581 144 -IGNLAKLEELYIDSCGAS 161 (905)
Q Consensus 144 -i~~L~~L~~L~L~~n~l~ 161 (905)
+..+.+|..|++.+|.-+
T Consensus 111 pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 111 PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcchhhhhcccCCcc
Confidence 344556666666666544
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0027 Score=63.12 Aligned_cols=103 Identities=22% Similarity=0.199 Sum_probs=58.9
Q ss_pred CCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCC--ccccCCCCccEE
Q 002581 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALP--PEIGNLAKLEEL 153 (905)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP--~~i~~L~~L~~L 153 (905)
.....+||++|.+.. + ..|..++.|.+|.|.+|+|+.+-|.--.-+++|+.|.|.+|++.. +- .-+..+++|++|
T Consensus 42 d~~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~-l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQE-LGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhh-hhhcchhccCCcccee
Confidence 345667777777642 2 335567777777777777776555544556677777777777641 11 124455666666
Q ss_pred EecccCCCCCC---chhhhccCccceecccC
Q 002581 154 YIDSCGASGEI---PSTFAKLHNMQILRASD 181 (905)
Q Consensus 154 ~L~~n~l~~~~---p~~l~~L~~L~~L~L~~ 181 (905)
.+-+|..+..- --.+..+++|+.||.+.
T Consensus 119 tll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 119 TLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred eecCCchhcccCceeEEEEecCcceEeehhh
Confidence 66666544211 11234455555555443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.008 Score=60.72 Aligned_cols=30 Identities=30% Similarity=0.402 Sum_probs=26.9
Q ss_pred CCccccccceeEEEEEeCCCcEEEEEEccc
Q 002581 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSI 677 (905)
Q Consensus 648 ~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~ 677 (905)
.+.||+|+||+||+|...+|+.||||++..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~ 31 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRT 31 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEec
Confidence 467999999999999988899999999864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0064 Score=70.69 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=47.9
Q ss_pred EEE-eCCCcEEEEEEccccCcccHHHHHHHHHHHhhCCCCCcceEEeEEEeCCeeEEEEc
Q 002581 661 KGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 661 ~g~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~lv~e 719 (905)
.|. ..++.+|.|...+...........+-++.|+.+|||||++++......+..|||.|
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 344 45788999999876655333446677899999999999999999999999999998
|
|
| >PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.011 Score=55.77 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=18.6
Q ss_pred ccCCCCCCEEECCCCCCCCCCchhhcCCccccEEecccccCCCCCcccccCCCCCCeEec
Q 002581 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131 (905)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~L 131 (905)
|.++++|+.+.+.. .+...-...|.++++|+.+.+.++ +...-...|.++++|+.+.+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~ 65 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITF 65 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEE
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccc
Confidence 33444444444442 233223333444444444444432 33222233444444444444
|
|
| >PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.01 Score=55.83 Aligned_cols=122 Identities=13% Similarity=0.153 Sum_probs=44.4
Q ss_pred hhcCCccccEEecccccCCCCCcccccCCCCCCeEecccccCCCCCCccccCCCCccEEEecccCCCCCCchhhhccCcc
Q 002581 95 FIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNM 174 (905)
Q Consensus 95 ~~~~L~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L~Ls~N~l~~~lP~~i~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L 174 (905)
.|.++++|+.+.+.. .+...-...|.++++|+.+.+..+ +...-...|.++++|+.+.+.. .+...-...|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 345555666666543 344333344555556666665543 4322233455555566666643 2222223345555666
Q ss_pred ceecccCccccCCCCCCCCCcccCCeeecccccCCCCCCccccCCCCC
Q 002581 175 QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASL 222 (905)
Q Consensus 175 ~~L~L~~N~l~~~ip~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L 222 (905)
+.+++..+ +...-...|.++ +|+.+.+.. .+...-...|.++++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66665443 332223344454 555555544 2222333444444443
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.0047 Score=65.59 Aligned_cols=35 Identities=31% Similarity=0.527 Sum_probs=31.9
Q ss_pred CCCChhhhccCCCCccCceEeechhhHHhHhCCCC
Q 002581 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRAN 754 (905)
Q Consensus 720 gY~APE~~~~~~~t~k~DVySfGvvLlElltg~~p 754 (905)
||-||||......+..+|||+||...+||.-+..-
T Consensus 247 g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 247 GFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred ccccCCcCcccccccchhhhhhhHHHHHHHHheec
Confidence 89999999999999999999999999999887654
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.012 Score=67.85 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=28.7
Q ss_pred CCCCCCccccccceeEEEEEeCCCcEEEEEEccc
Q 002581 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSI 677 (905)
Q Consensus 644 ~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~ 677 (905)
.|+ .+.||+|++|.||+|++.+|+.||||+.+.
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp 151 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRP 151 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCC
Confidence 344 468999999999999999999999999854
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.0034 Score=77.18 Aligned_cols=41 Identities=37% Similarity=0.619 Sum_probs=34.1
Q ss_pred HHHHHhcCCCCCCccccccceeEEEEEeCCCcEEEEEEccc
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSI 677 (905)
Q Consensus 637 ~l~~~t~~f~~~~~iG~G~~g~Vy~g~~~~g~~vAvK~l~~ 677 (905)
+.+.--+.|.+.+.||+|+||+||+|.-.+|+.||+|+=+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P 732 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKP 732 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecC
Confidence 33444566888999999999999999988899999998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 905 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 4e-19 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 3e-17 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-10 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 4e-19 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-10 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-17 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 5e-09 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-05 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-15 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 5e-15 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-11 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-05 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-11 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-05 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-11 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-05 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-06 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-06 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-06 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 9e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 4e-05 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 6e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 7e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 9e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 9e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 9e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 9e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-04 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-04 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-04 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-04 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-04 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-04 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-04 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-04 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-04 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-04 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-04 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-04 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-04 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-04 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-04 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-04 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 3e-04 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 3e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 3e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 3e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 3e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 4e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 4e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 4e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 4e-04 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 4e-04 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 5e-04 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 6e-04 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 6e-04 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 6e-04 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 6e-04 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 6e-04 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-04 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-04 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 6e-04 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 6e-04 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 6e-04 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-04 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 6e-04 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-04 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 7e-04 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 7e-04 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 7e-04 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-04 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 254 bits (651), Expect = 7e-73
Identities = 96/315 (30%), Positives = 139/315 (44%), Gaps = 23/315 (7%)
Query: 66 GVIPEELVT---LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGN 122
G V L L I N +G + + L L ++ N FS +P LG+
Sbjct: 165 GANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGD 221
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L L ++ N SG I +L+ L I S G IP L ++Q L ++
Sbjct: 222 CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAEN 279
Query: 183 HFTGKIPDFI-GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS-SLDFV 240
FTG+IPDF+ G LT L L GN F G +P + LESL +S F +D +
Sbjct: 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGEL-QNLQTLDLSFNNLTGQIPRTLFNID--SLNYL 297
+ ++ LK L L +G +P + L +L TLDLS NN +G I L +L L
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399
Query: 298 FLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFTFDG- 351
+L NN +G +P L ++ LS+N+LSG PS + S L+ L +N G
Sbjct: 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE--GE 457
Query: 352 --SNISVFPGLQCLQ 364
+ L+ L
Sbjct: 458 IPQELMYVKTLETLI 472
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 247 bits (633), Expect = 3e-70
Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 20/310 (6%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSF--IGNLSRLTLLSLAHN 110
+ L + + G + LT L + RN +GP+ + +G+ S L L+++ N
Sbjct: 78 GLESLFLSNSHINGSVSG-FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSN 136
Query: 111 VFSGPVPRELG-NLKELNLLSLANNNFSGALPPEI---GNLAKLEELYIDSCGASGEIPS 166
P G L L +L L+ N+ SGA +L+ L I SG++
Sbjct: 137 TLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD- 195
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226
++ N++ L S +F+ IP F+G+ + L L + GN G ++S L+ L
Sbjct: 196 -VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIP 285
IS FV LK+L+ LSL TG IP + G L LDLS N+ G +P
Sbjct: 254 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQ---KSENLQNIDLSYNHLSGPFPSWV---TSSLQ 339
+ L L L +N+ SG LP K L+ +DLS+N SG P + ++SL
Sbjct: 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371
Query: 340 M-NLAVNNFT 348
+L+ NNF+
Sbjct: 372 TLDLSSNNFS 381
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 244 bits (625), Expect = 3e-69
Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 13/292 (4%)
Query: 66 GVIPEEL--VTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNL 123
G I L L L + N FTG +P + N S L L L+ N SG +P LG+L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 124 KELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAH 183
+L L L N G +P E+ + LE L +D +GEIPS + N+ + S+
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 184 FTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSL 243
TG+IP +IG L L+L NSF G IP+ L SL L ++ F + ++ ++
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF-NGTIP--AAM 558
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFN--NLTGQIPRTLFNIDSLNYLFLGN 301
N + G I + + N G L + + N + +
Sbjct: 559 FKQSGKIAANFI-AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 617
Query: 302 NSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPSWVT--SSLQ-MNLAVNNFT 348
G ++ +D+SYN LSG P + L +NL N+ +
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 239 bits (611), Expect = 2e-67
Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 8/271 (2%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
G IP+EL+ ++ L L +D N TG +PS + N + L +SL++N +G +P+ +G L+
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 126 LNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT 185
L +L L+NN+FSG +P E+G+ L L +++ +G IP+ K +
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI----AANFIA 571
Query: 186 GKIPDFIGNWTKLTALRLQGN--SFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSL 243
GK +I N GN FQG L++L++ I+ + + +
Sbjct: 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
++ L + +++G IP IG + L L+L N+++G IP + ++ LN L L +N
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 304 LSGTLPTQKSE--NLQNIDLSYNHLSGPFPS 332
L G +P S L IDLS N+LSGP P
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 6e-61
Identities = 76/323 (23%), Positives = 121/323 (37%), Gaps = 49/323 (15%)
Query: 44 CTFDNGATC---HITKLRVYALN---KKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIG 97
CTFD G TC +T + + + + L++L L L + + G + F
Sbjct: 40 CTFD-GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGF-K 97
Query: 98 NLSRLTLLSLAHNVFSGPVP--RELGNLKELNLLSLANNNFSGALP-PEIGNLAKLEELY 154
+ LT L L+ N SGPV LG+ L L++++N L LE L
Sbjct: 98 CSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157
Query: 155 IDSCGASGEIPSTFA---KLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP 211
+ + SG + ++ L S +G + + L L + N+F
Sbjct: 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTG 215
Query: 212 IPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQ 271
IP + L+ L + ++G I L+
Sbjct: 216 IPF-------------------------LGDCSALQHLDISGNKLSGDFSRAISTCTELK 250
Query: 272 TLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ---KSENLQNIDLSYNHLSG 328
L++S N G IP + SL YL L N +G +P + L +DLS NH G
Sbjct: 251 LLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 329 PFPSWVT--SSLQ-MNLAVNNFT 348
P + S L+ + L+ NNF+
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFS 331
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 3e-29
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 46 FDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLL 105
N L +G+ E+L L I + G N + L
Sbjct: 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637
Query: 106 SLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIP 165
+++N+ SG +P+E+G++ L +L+L +N+ SG++P E+G+L L L + S G IP
Sbjct: 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNS 207
+ L + + S+ + +G IP+ +G + + N
Sbjct: 698 QAMSALTMLTEIDLSNNNLSGPIPE-MGQFETFPPAKFLNNP 738
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 1e-68
Identities = 81/305 (26%), Positives = 121/305 (39%), Gaps = 41/305 (13%)
Query: 42 CDCTFDNGATC-------HITKLRVYALNKKGV--IPEELVTLQYLTFLKI-DRNFFTGP 91
C+ T+ G C + L + LN IP L L YL FL I N GP
Sbjct: 34 CNRTW-LGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGP 92
Query: 92 LPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLE 151
+P I L++L L + H SG +P L +K L L + N SG LPP I +L L
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 152 ELYIDSCGASGEIPSTFAKLHNM-QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
+ D SG IP ++ + + S TGKIP N L + L N +G
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG 211
Query: 211 PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNL 270
+ + + L+ +N+L + +G +NL
Sbjct: 212 DASVLFGSDKNTQKI----------------------HLA-KNSL-AFDLGK-VGLSKNL 246
Query: 271 QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKS-ENLQNIDLSYN-HLSG 328
LDL N + G +P+ L + L+ L + N+L G +P + + + N L G
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 329 -PFPS 332
P P+
Sbjct: 307 SPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 6e-67
Identities = 72/271 (26%), Positives = 103/271 (38%), Gaps = 31/271 (11%)
Query: 85 RNFFTGPLPSFIGNLSRLTLLSLAHNVFSG--PVPRELGNLKELNLLSLAN-NNFSGALP 141
+ G L R+ L L+ P+P L NL LN L + NN G +P
Sbjct: 35 NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 94
Query: 142 PEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTAL 201
P I L +L LYI SG IP +++ + L S +G +P I + L +
Sbjct: 95 PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 202 RLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP 261
GN G IP S + L +++ +TG IP
Sbjct: 155 TFDGNRISGAIPDSYGSFSKL-----------------------FTSMTISRNRLTGKIP 191
Query: 262 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT-QKSENLQNID 320
L NL +DLS N L G + + + L NSL+ L S+NL +D
Sbjct: 192 PTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLD 250
Query: 321 LSYNHLSGPFPSWVT--SSLQM-NLAVNNFT 348
L N + G P +T L N++ NN
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 219 bits (560), Expect = 9e-65
Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 53/321 (16%)
Query: 5 DAPAVRLWNISGNPCSGS----------------ALNATDSAFESPDNNPAIVCDCTFDN 48
+ + W + + C+ + L+ + P P+ + + +
Sbjct: 20 NPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY-- 77
Query: 49 GATCHITKLRVYALNK-KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSL 107
+ L + +N G IP + L L +L I +G +P F+ + L L
Sbjct: 78 -----LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 108 AHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL-EELYIDSCGASGEIPS 166
++N SG +P + +L L ++ N SGA+P G+ +KL + I +G+IP
Sbjct: 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP 192
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226
TFA L N+ + S G G+ + L NS + + +L L
Sbjct: 193 TFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGL- 249
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPR 286
DL N + GT+P G+ +L+ L +L++SFNNL G+IP
Sbjct: 250 ---------------------DLR-NNRI-YGTLPQGLTQLKFLHSLNVSFNNLCGEIP- 285
Query: 287 TLFNIDSLNYL-FLGNNSLSG 306
N+ + + N L G
Sbjct: 286 QGGNLQRFDVSAYANNKCLCG 306
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 8e-51
Identities = 68/283 (24%), Positives = 101/283 (35%), Gaps = 58/283 (20%)
Query: 92 LPSFIGNLSRL----TLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSG--ALPPEIG 145
+ +GN + L + + G + +N L L+ N +P +
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 146 NLAKLEELYI-DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQ 204
NL L LYI G IP AKL + L + + +G IPDF+ L L
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 205 GNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI 264
N+ G +P S+S L +L + N + +G IP
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFD-----------------------GNRI-SGAIPDSY 169
Query: 265 GELQNLQT-LDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSY 323
G L T + +S N LTG+IP T N+ NL +DLS
Sbjct: 170 GSFSKLFTSMTISRNRLTGKIPPTFANL-----------------------NLAFVDLSR 206
Query: 324 NHLSGPFPSWVT--SSLQ-MNLAVNNFTFDGSNISVFPGLQCL 363
N L G + Q ++LA N+ FD + + L L
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGL 249
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 1e-51
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS--LDTEKIYLLEWAWNLHENN 777
G++APEY G +EK DVF +GV+ LE+I+G+ D + + + + LL+W L +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 778 QSLGLVDPTL-TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826
+ LVD L + D+E ++I VALLCTQ+SPM RP MS VV ML GD
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 8e-50
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 616 DNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQL 675
+D EV +G + FS EL+ A+ +F N LG GG+G VYKG L+DG ++AVK+L
Sbjct: 6 AEEDPEVHLG---QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 62
Query: 676 SIASHQG-KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
QG + QF E+ IS HRNL+RL G C+ RLLVY Y+A
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP-YMA 110
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 2e-50
Identities = 52/336 (15%), Positives = 114/336 (33%), Gaps = 52/336 (15%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGP-------------------LPSFIGNLSRLT 103
N + + ++ L L + + F NL LT
Sbjct: 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLT 252
Query: 104 LLSLAHNVFSGPVPRELGNLKELNLLSLANNNF--------SGALPPEIGNLAKLEELYI 155
+ + + +P L L E+ L+++A N + K++ +YI
Sbjct: 253 DVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312
Query: 156 DSCG-ASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS 214
+ + ++ K+ + +L GK+P F G+ KL +L L N +
Sbjct: 313 GYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAF-GSEIKLASLNLAYNQITEIPAN 371
Query: 215 SLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITG-------TIPSGIG 265
+E+L + + ++ + S+ + + I +
Sbjct: 372 FCGFTEQVENLSFAHNKLKYIPNIF-DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430
Query: 266 ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG-------TLPTQ--KSENL 316
+ N+ +++LS N ++ L+ + L N L+ + L
Sbjct: 431 KGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLL 490
Query: 317 QNIDLSYNHLSGPFPSWVTSSLQ----MNLAVNNFT 348
+IDL +N L+ + ++L ++L+ N+F+
Sbjct: 491 TSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFS 526
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 8e-47
Identities = 50/290 (17%), Positives = 101/290 (34%), Gaps = 25/290 (8%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGP----VPRELGNLKELNLLSLAN 133
+T L ++ +G +P IG L+ L +L+L + P+ +
Sbjct: 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR 142
Query: 134 NNFSGALPPEIGNLA--KLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDF 191
++ L + I+S I + + + T +
Sbjct: 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKA 201
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL 251
+ TKL + + F + + E + D +LK+L D+ +
Sbjct: 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT--EDLKWD---NLKDLTDVEV 256
Query: 252 RNALITGTIPSGIGELQNLQTLDLSFNNLT--------GQIPRTLFNIDSLNYLFLGNNS 303
N +P+ + L +Q ++++ N Q + + +++G N+
Sbjct: 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316
Query: 304 L-SGTLPT--QKSENLQNIDLSYNHLSGPFPSWVT-SSLQM-NLAVNNFT 348
L + + T QK + L ++ YN L G P++ + L NLA N T
Sbjct: 317 LKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT 366
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 3e-46
Identities = 42/318 (13%), Positives = 98/318 (30%), Gaps = 39/318 (12%)
Query: 62 LNKKGVIPEELVTLQY--LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRE 119
++ + + + L I+ + + + T + N + V +
Sbjct: 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKA 201
Query: 120 LGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRA 179
+ L +L + N+ F E E + L ++ +
Sbjct: 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ-----YKTEDLKWDNLKDLTDVEV 256
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQG--PIPSSLSKLASLESLRISDIYFVSSSL 237
+ K+P F+ ++ + + N + LA
Sbjct: 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP-------------- 302
Query: 238 DFVMSLKNLKDLSLR-NALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNY 296
+ ++ + + N L T + + + +++ L L+ +N L G++P + L
Sbjct: 303 ----VGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLAS 357
Query: 297 LFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGPFPSWVT----SSLQM-NLAVNNFT- 348
L L N ++ +E ++N+ ++N L P+ S + + + N
Sbjct: 358 LNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIGS 416
Query: 349 FDGSNISVFPGLQCLQRN 366
DG N N
Sbjct: 417 VDGKNFDPLDPTPFKGIN 434
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 6e-46
Identities = 42/286 (14%), Positives = 85/286 (29%), Gaps = 32/286 (11%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSG-PVPRELGNLKEL 126
+ L L + N T +F G ++ LS AHN P + ++ +
Sbjct: 345 KLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVM 404
Query: 127 NLLSLANNNFSG-------ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRA 179
+ + + N L P + + + + S F+ + +
Sbjct: 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINL 464
Query: 180 SDAHFTG-------KIPDFIGNWTKLTALRLQGNSFQGPIPSSL--SKLASLESLRISDI 230
T + N LT++ L+ N + + L L + +S
Sbjct: 465 MGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYN 523
Query: 231 YFVSSSL-DFVMSLKNLKDLSLRNAL------ITGTIPSGIGELQNLQTLDLSFNNLTGQ 283
F S ++ LK +RN P GI +L L + N++
Sbjct: 524 SF--SKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK- 580
Query: 284 IPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLS 327
+ + +++ L + +N + L Y+
Sbjct: 581 VNEKITP--NISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 4e-45
Identities = 51/309 (16%), Positives = 96/309 (31%), Gaps = 42/309 (13%)
Query: 62 LNKKGVIPEELVTLQYLTFLKIDRN-FFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
L + + + + I N T P+ + + + +L +L +N G +P
Sbjct: 291 LKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349
Query: 121 GNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTFA--KLHNMQIL 177
G+ +L L+LA N + +P G ++E L IP+ F + M +
Sbjct: 350 GSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAI 407
Query: 178 RASDAHFTG-------KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD- 229
S + ++++ L N S + L S+ +
Sbjct: 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467
Query: 230 ------IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPS-GIGELQNLQTLDLSFNNLTG 282
+ + + L + LR +T L L +DLS+N+ +
Sbjct: 468 MLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK 527
Query: 283 QIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQM 340
P N +L + N D N +P +T SL
Sbjct: 528 -FPTQPLNSSTLKGFGIRNQ----------------RDAQGNRTLREWPEGITLCPSLTQ 570
Query: 341 -NLAVNNFT 348
+ N+
Sbjct: 571 LQIGSNDIR 579
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 2e-43
Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 26/285 (9%)
Query: 84 DRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSG----A 139
+ + + + + R+T LSL SG VP +G L EL +L+L ++
Sbjct: 65 ELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLF 124
Query: 140 LPPEIGNLAKLEELYIDSCGASGEIPSTFAKLH--NMQILRASDAHFTGKIPDFIGNWTK 197
P I E+ + ++ + I K
Sbjct: 125 GPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184
Query: 198 LTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALIT 257
T + N+ + ++ +L L + + FV+ ++ + ++ + A
Sbjct: 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENI-----CEAWENENSEYAQQY 238
Query: 258 GTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL--------SGTLP 309
T L++L +++ ++P L + + + + N
Sbjct: 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298
Query: 310 TQ--KSENLQNIDLSYNHL-SGPFPSWVT--SSLQM-NLAVNNFT 348
E +Q I + YN+L + P + + L M N
Sbjct: 299 ADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 5e-30
Identities = 29/252 (11%), Positives = 75/252 (29%), Gaps = 23/252 (9%)
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG--- 186
+ + + + + ++ L ++ GASG +P +L +++L
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 187 -KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLA--SLESLRISDIYFVSSSLDFVMSL 243
P I + +Q + L I+ S
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
+ + IT + + L L+ + + + + ++ Y
Sbjct: 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY-----AQ 236
Query: 304 LSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFT------FDGS 352
T + ++L ++++ P+++ +Q+ N+A N D
Sbjct: 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ 296
Query: 353 NISVFPGLQCLQ 364
++ P + +Q
Sbjct: 297 ALADAPVGEKIQ 308
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 8/86 (9%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
PE + LT L+I N + I +++L + N + E
Sbjct: 556 REWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIE 612
Query: 126 LNLLSLANNNFSGALPPEIGNLAKLE 151
+ L + +I L+
Sbjct: 613 AGMYMLFYDK-----TQDIRGCDALD 633
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 175 bits (447), Expect = 3e-46
Identities = 54/316 (17%), Positives = 98/316 (31%), Gaps = 21/316 (6%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
+ PE L L L + N + + LT L L N K
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 126 LNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNM--QILRASDAH 183
L L L++N S L L+EL + + N + L S
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182
Query: 184 FTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLS---KLASLESLRISD--IYFVSSSLD 238
P +L L L + L S+ +L +S+ + S++
Sbjct: 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242
Query: 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLF 298
+ NL L L + L L+ L +NN+ +L + ++ YL
Sbjct: 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN 302
Query: 299 LGNNSLSGTLPTQKSE-----------NLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAV 344
L + ++ L+++++ N + G + T +L+ +L+
Sbjct: 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN 362
Query: 345 NNFTFDGSNISVFPGL 360
+ + F L
Sbjct: 363 SFTSLRTLTNETFVSL 378
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-45
Identities = 65/317 (20%), Positives = 109/317 (34%), Gaps = 21/317 (6%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P++L +T L + N + S+LT L + N S P L L
Sbjct: 19 VPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 76
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
+L+L +N S L EL++ S + F K N+ L S +
Sbjct: 77 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 136
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLS--KLASLESLRISDIYFVSSSLDFVMSLKN 245
L L L N Q L +SL+ L +S S ++
Sbjct: 137 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196
Query: 246 LKDLSLRNALITGTIPSGIGE---LQNLQTLDLSFNNLTGQIPRTLFNID--SLNYLFLG 300
L L L N + ++ + +++ L LS + L+ T + +L L L
Sbjct: 197 LFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256
Query: 301 NNSLSGTLPT--QKSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFTFDGSNIS 355
N+L+ L+ L YN++ F + +++ NL + S S
Sbjct: 257 YNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 316
Query: 356 -------VFPGLQCLQR 365
F L+CL+
Sbjct: 317 LPKIDDFSFQWLKCLEH 333
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 9e-45
Identities = 62/325 (19%), Positives = 105/325 (32%), Gaps = 26/325 (8%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK 124
+ + LT L + N + L L L+HN S L+
Sbjct: 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 145
Query: 125 ELNLLSLANNNFSGALPPEIGNLA--KLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L L L+NN E+ A L++L + S P F + + L ++
Sbjct: 146 NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 205
Query: 183 HFTGKIPDFIG---NWTKLTALRLQGNSFQGPIPSSLS--KLASLESLRISDIYFVSSSL 237
+ + + T + L L + ++ K +L L +S
Sbjct: 206 QLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265
Query: 238 DFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL---------SFNNLTGQIPRTL 288
D L L+ L I + L N++ L+L S +L +
Sbjct: 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325
Query: 289 FNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLS------GPFPSWVTSSLQM 340
+ L +L + +N + G NL+ + LS + S F S S L +
Sbjct: 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHI 385
Query: 341 -NLAVNNFTFDGSN-ISVFPGLQCL 363
NL N + S+ S L+ L
Sbjct: 386 LNLTKNKISKIESDAFSWLGHLEVL 410
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 1e-43
Identities = 61/318 (19%), Positives = 92/318 (28%), Gaps = 48/318 (15%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLS------------------ 106
+ L+ L L ++ N G + L L LS
Sbjct: 318 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVS 377
Query: 107 ----------LAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPP-EIGNLAKLEELYI 155
L N S L L +L L N L E L + E+Y+
Sbjct: 378 LAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYL 437
Query: 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTG--KIPDFIGNWTKLTALRLQGNSFQGPIP 213
++FA + ++Q L P LT L L N+
Sbjct: 438 SYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497
Query: 214 SSLSKLASLESLRISD--------IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIG 265
L L LE L + + F+ L +L L+L +
Sbjct: 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557
Query: 266 ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE---NLQNIDLS 322
+L L+ +DL NNL N SL L L N ++ NL +D+
Sbjct: 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMR 617
Query: 323 YNHLSG------PFPSWV 334
+N F +W+
Sbjct: 618 FNPFDCTCESIAWFVNWI 635
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 269 NLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHL 326
+ + D S LT Q+P L ++ L L +N L + L ++D+ +N +
Sbjct: 5 SHEVADCSHLKLT-QVPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 327 SGPFPSWVT--SSLQM-NLAVNNFTFDGSNISVFPGLQCLQR 365
S P L++ NL N + + F L
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELS--QLSDKTFAFCTNLTE 101
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 4e-44
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
Y+APE +RG +T K+D++SFGVV LE+I+G D + + LL+ + + ++
Sbjct: 200 AYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIKEEIEDEEKT 256
Query: 780 L-GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ +D + + + + VA C RP + +V +L
Sbjct: 257 IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-43
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDP------SNKLGEGGYGPVYKGTLSDGRVIAV 672
+ + L +++ ++FS+ EL++ T +FD NK+GEGG+G VYKG + + +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 673 KQLS----IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
K+L+ I + + K QF EI ++ QH NLV L G +G LVY
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 7e-44
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 18/283 (6%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN--N 135
L++ F + +L RLT S +L L L L+ N +
Sbjct: 306 WQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN-----AFSEVDLPSLEFLDLSRNGLS 360
Query: 136 FSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP-DFIGN 194
F G L+ L + G + S F L ++ L ++ +
Sbjct: 361 FKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 419
Query: 195 WTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSL-DFVMSLKNLKDLSLRN 253
L L + + + L+SLE L+++ F + L D L+NL L L
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 254 ALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ-- 311
+ P+ L +LQ L++S NN ++SL L N + + +
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 539
Query: 312 -KSENLQNIDLSYNHLSG-----PFPSWVTSSLQMNLAVNNFT 348
+L ++L+ N + F W+ Q+ + V
Sbjct: 540 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 582
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 4e-42
Identities = 64/315 (20%), Positives = 105/315 (33%), Gaps = 20/315 (6%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE 125
+ +L +L+ L + N LS L L + +G+LK
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 126 LNLLSLANNNF-SGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRA----S 180
L L++A+N S LP NL LE L + S + LH M +L S
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS-SLSKLASLESLRISDIYFVSS---S 236
I +L L L+ N + + LA LE R+ F +
Sbjct: 186 LNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244
Query: 237 LDFVMSLKNLKDLSL------RNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFN 290
+L+ L +L++ I L N+ + L + +
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF 304
Query: 291 IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ-MNLAVNNFTF 349
+L L N PT K ++L+ + + N F SL+ ++L+ N +F
Sbjct: 305 --GWQHLELVNCKFGQ-FPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF 361
Query: 350 DGSNISVFPGLQCLQ 364
G G L+
Sbjct: 362 KGCCSQSDFGTTSLK 376
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 1e-41
Identities = 53/335 (15%), Positives = 96/335 (28%), Gaps = 44/335 (13%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
IP+ L L + N + L +L L+ +L L+
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG- 186
L L N L+ L++L + L ++ L +
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRIS---DIYFVSSSLDFVMSL 243
K+P++ N T L L L N Q + L L + L +S + ++
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE 199
Query: 244 KNLKDLSLRNALITGTIPSGI----------------------------GELQNLQTLDL 275
L L+LRN + + L+ L L +
Sbjct: 200 IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259
Query: 276 SFNNLT------GQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP 329
L I + +++ L + ++ + Q+++L
Sbjct: 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQ- 318
Query: 330 FPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQ 364
FP+ SL+ L + G N L L+
Sbjct: 319 FPTLKLKSLK-RLTFTSNK--GGNAFSEVDLPSLE 350
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 9e-38
Identities = 62/318 (19%), Positives = 109/318 (34%), Gaps = 26/318 (8%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVF-SGPVPRELGNLK 124
+ L L L IG+L L L++AHN+ S +P NL
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 149
Query: 125 ELNLLSLANNNFSGALPPEIGNLAKLE----ELYIDSCGASGEIPSTFAKLHNMQILRAS 180
L L L++N ++ L ++ L + + P F ++ + L
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLR 208
Query: 181 DAHFTGKIP-DFIGNWTKLTALRLQGNSFQG------PIPSSLSKLASL--ESLRISDIY 231
+ + + I L RL F+ S+L L +L E R++ +
Sbjct: 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268
Query: 232 FVSSSLDFVMS-LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFN 290
+ + + + L N+ SL + I Q L+L L +
Sbjct: 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKS 326
Query: 291 IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS----GPFPSWVTSSLQ-MNLAVN 345
+ L + +N +L+ +DLS N LS + T+SL+ ++L+ N
Sbjct: 327 LKRLTFT---SNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383
Query: 346 NFTFDGSNISVFPGLQCL 363
SN L+ L
Sbjct: 384 GVITMSSNFLGLEQLEHL 401
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 6e-32
Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 6/234 (2%)
Query: 62 LNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRE-L 120
L+ KG + L +L + N + S L +L L H+
Sbjct: 359 LSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 417
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEI-PSTFAKLHNMQILRA 179
+L+ L L +++ + A L+ LE L + P F +L N+ L
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDF 239
S P + + L L + N+F L SL+ L S + ++S
Sbjct: 478 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 537
Query: 240 VMSL-KNLKDLSLRNALITGTIPSG--IGELQNLQTLDLSFNNLTGQIPRTLFN 290
+ +L L+L T + +++ + L + + P
Sbjct: 538 LQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 591
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-27
Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 37/241 (15%)
Query: 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFI 192
NF +P + + L + +F +Q+L S
Sbjct: 16 ELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY 72
Query: 193 GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLR 252
+ + L+ L L GN Q + S L +L+ L
Sbjct: 73 QSLSHLSTLILTGNPIQSLALGAFS------------------------GLSSLQKLVAV 108
Query: 253 NALITGTIPSGIGELQNLQTLDLSFNNLTG-QIPRTLFNIDSLNYLFLGNNSLSGTLP-- 309
+ IG L+ L+ L+++ N + ++P N+ +L +L L +N +
Sbjct: 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168
Query: 310 ----TQKSENLQNIDLSYNHLSGPFPSWVTS-SLQM-NLAVNNFTFDGSNISVFPGLQCL 363
Q ++DLS N ++ P L L N + + GL L
Sbjct: 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTC-IQGLAGL 227
Query: 364 Q 364
+
Sbjct: 228 E 228
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 5e-23
Identities = 39/215 (18%), Positives = 70/215 (32%), Gaps = 28/215 (13%)
Query: 65 KGVIPEE-LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPV-PRELGN 122
K + ++L+ L +L I LS L +L +A N F P
Sbjct: 409 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L+ L L L+ P +L+ L+ L + + L+++Q+L S
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 528
Query: 183 HFTGKIPDFIGNW-TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVM 241
H + ++ + L L L N F F+
Sbjct: 529 HIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ----------------------SFLQ 566
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
+K+ + L + + PS + Q + L L+
Sbjct: 567 WIKDQRQLLVEVERMECATPS---DKQGMPVLSLN 598
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-43
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 632 TFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIA 691
+L AT +FD +G G +G VYKG L DG +A+K+ + S QG +F EI
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 692 TISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
T+S +H +LV L G C E +L+Y +Y G+L
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIY------KYMENGNL 122
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-42
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
GY+ PEY ++G LTEK+DV+SFGVV EV+ R+ SL E + L EWA H N Q
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 780 LGLVDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829
+VDP L + + + A+ C S RP M V+ L + +
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 6e-40
Identities = 66/328 (20%), Positives = 112/328 (34%), Gaps = 14/328 (4%)
Query: 35 DNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPS 94
D + + F+ + + + + L L + + LPS
Sbjct: 237 DMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPS 295
Query: 95 FIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPE-IGNLAKLEEL 153
+ LS L L L+ N F N L LS+ N L + NL L EL
Sbjct: 296 GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLREL 355
Query: 154 YIDSC--GASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG- 210
+ S L ++Q L S + +L L L +
Sbjct: 356 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVK 415
Query: 211 PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTI---PSGIGEL 267
S L L+ L +S SS L L+ L+L+ + + L
Sbjct: 416 DAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475
Query: 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQN--IDLSYNH 325
L+ L LSF +L+ ++ +N++ L +N L+ + + +L+ ++L+ NH
Sbjct: 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT-SSSIEALSHLKGIYLNLASNH 534
Query: 326 LSGPFPSWVT--SSLQM-NLAVNNFTFD 350
+S PS + S + NL N
Sbjct: 535 ISIILPSLLPILSQQRTINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 6e-39
Identities = 67/338 (19%), Positives = 117/338 (34%), Gaps = 21/338 (6%)
Query: 45 TFDNGATCHITKLRVYAL--NKKGVIPEEL---VTLQYLTFLKIDRNFFTGPLPSFIGNL 99
F I L + I + + + + + +++F +
Sbjct: 218 IFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCF 277
Query: 100 SRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCG 159
S L L L S +P L L L L L+ N F N L L I
Sbjct: 278 SGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNT 336
Query: 160 ASGEIPS-TFAKLHNMQILRASD--AHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
E+ + L N++ L S + + N + L +L L N +
Sbjct: 337 KRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAF 396
Query: 217 SKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLD 274
+ LE L ++ + + F +L LK L+L ++L+ + L LQ L+
Sbjct: 397 KECPQLELLDLAFTRLKVKDAQSPFQ-NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455
Query: 275 LSFNNLTG---QIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGP 329
L N+ Q +L + L L L LS + + ++DLS+N L+
Sbjct: 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515
Query: 330 FPSWVT--SSLQMNLAVNNFTFDGSNISVFPGLQCLQR 365
++ + +NLA N+ + S+ P L +
Sbjct: 516 SIEALSHLKGIYLNLASNHIS--IILPSLLPILSQQRT 551
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 7e-38
Identities = 53/336 (15%), Positives = 95/336 (28%), Gaps = 36/336 (10%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK 124
+ L LTFL + R + RL L L N L K
Sbjct: 46 PTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK 105
Query: 125 ELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHF 184
L L S + N LE LY+ S S +++L +
Sbjct: 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165
Query: 185 TG-------------------------KIPDFIGNWTKLTALRLQGNSFQGPIPSSLS-- 217
I + +L G I L
Sbjct: 166 HYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNS 225
Query: 218 KLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL 275
+ SL D +S ++ + +++ ++L+ + LQ LDL
Sbjct: 226 TIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL 285
Query: 276 SFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGPFPS- 332
+ +L+ ++P L + +L L L N +L ++ + N +
Sbjct: 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344
Query: 333 --WVTSSLQ-MNLAVNNFTFDGSNISVFPGLQCLQR 365
+L+ ++L+ ++ L LQ
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQS 380
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-37
Identities = 61/341 (17%), Positives = 115/341 (33%), Gaps = 23/341 (6%)
Query: 45 TFDNGATCHITKLRVYAL----NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGN-- 98
+ + +L N I L + + N
Sbjct: 167 YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNST 226
Query: 99 LSRLTLLSLAHNVFSGPVPRELGNLKELNL--LSLANNNFSGALPPEIGNLAKLEELYID 156
+ L L + P L E+++ ++L + F + L+EL +
Sbjct: 227 IQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLT 286
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS-S 215
+ S E+PS L ++ L S F N+ LT L ++GN+ + + +
Sbjct: 287 ATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345
Query: 216 LSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTL 273
L L +L L +S I + +L +L+ L+L E L+ L
Sbjct: 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405
Query: 274 DLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGPF 330
DL+F L + ++ F N+ L L L ++ L + LQ+++L NH
Sbjct: 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGN 465
Query: 331 PSWVT-----SSLQM-NLAVNNFTFDGSNISVFPGLQCLQR 365
L++ L+ + + + F L+ +
Sbjct: 466 IQKTNSLQTLGRLEILVLSFCDLSSIDQHA--FTSLKMMNH 504
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-32
Identities = 56/308 (18%), Positives = 90/308 (29%), Gaps = 16/308 (5%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
IP L L+ N + L LT L L + L+
Sbjct: 27 IPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLD 84
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L L N + L+ L+ G S ++ L H +
Sbjct: 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIY-FVSSSLDFVMSLKNL 246
KL L Q N+ +S L +L ++ ++
Sbjct: 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVF 204
Query: 247 KDLSLRNALITGTIPSGIG--ELQNLQTLDLSFNNLTGQIPRTLFNID---SLNYLFLGN 301
+ L+ I G+ +Q+L + I +F S+ + L
Sbjct: 205 QSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDE-DISPAVFEGLCEMSVESINLQK 263
Query: 302 NSLSGTLPT--QKSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFT-FDGSNIS 355
+ LQ +DL+ HLS PS + S+L+ L+ N F + S
Sbjct: 264 HYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISAS 322
Query: 356 VFPGLQCL 363
FP L L
Sbjct: 323 NFPSLTHL 330
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 7e-25
Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 9/242 (3%)
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
+ N + +P + E L +TF++L N+ L +
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
D + +L L L N ++LS +L+ L S + + K L+
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN--YLFLGNNSLSG 306
L L + I+ + L+ LD N + + ++ L L N ++G
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193
Query: 307 TLPTQ-KSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFT---FDGSNISVFPGLQC 362
P S Q+++ + +S +L + F + + +VF GL
Sbjct: 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE 253
Query: 363 LQ 364
+
Sbjct: 254 MS 255
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 4e-05
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 271 QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSG 328
+T + L +IP TL N S L N L T + NL +DL+ +
Sbjct: 15 KTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 6e-40
Identities = 43/305 (14%), Positives = 93/305 (30%), Gaps = 33/305 (10%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELG-NLKEL 126
L + L L N L +F G +LT L L +N +P + ++
Sbjct: 565 ASASLQKMVKLGLLDCVHNKVRH-LEAF-GTNVKLTDLKLDYNQIEE-IPEDFCAFTDQV 621
Query: 127 NLLSLANNNFSGALPP--EIGNLAKLEELYIDSCGASGEIPSTFA-----KLHNMQILRA 179
L ++N +P ++ + + E + K N +
Sbjct: 622 EGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQ-------GPIPSSLSKLASLESLRISD--I 230
S + + ++ + L N P + L ++ + +
Sbjct: 681 SYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL 740
Query: 231 YFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSF------NNLTGQI 284
+S +L L ++ + + + P+ L+ + N + Q
Sbjct: 741 TSLSDDFRAT-TLPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQW 798
Query: 285 PRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHL-SGPFPSWVT--SSLQMN 341
P + SL L +G+N + + + + L +D++ N S S +
Sbjct: 799 PTGITTCPSLIQLQIGSNDIR-KVDEKLTPQLYILDIADNPNISIDVTSVCPYIEAGMYV 857
Query: 342 LAVNN 346
L +
Sbjct: 858 LLYDK 862
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 4e-38
Identities = 59/338 (17%), Positives = 116/338 (34%), Gaps = 58/338 (17%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGP-------------------LPSFIGNLSRLT 103
N+ I + + L L + + FT NL LT
Sbjct: 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494
Query: 104 LLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSG---------ALPPEIGNLAKLEELY 154
+ L + +P L +L EL L++A N L + K++ Y
Sbjct: 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554
Query: 155 IDSCGASGEIPS--TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212
+ E P+ + K+ + +L + F G KLT L+L N + I
Sbjct: 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAF-GTNVKLTDLKLDYNQIEE-I 610
Query: 213 PSSL-SKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQN 269
P + +E L S + ++ + + S+ + + I + + +
Sbjct: 611 PEDFCAFTDQVEGLGFSHNKLKYIPNIFNA-KSVYVMGSVDFSYNKIGSEGRNISCSMDD 669
Query: 270 LQ-----TLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE---------- 314
+ T+ LS+N + ++ + L NN ++ ++P +
Sbjct: 670 YKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728
Query: 315 NLQNIDLSYNHLSGPFPSWVTSSLQ----MNLAVNNFT 348
L IDL +N L+ + ++L M+++ N F+
Sbjct: 729 LLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFS 766
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 9e-35
Identities = 42/302 (13%), Positives = 89/302 (29%), Gaps = 29/302 (9%)
Query: 84 DRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPE 143
+ + + + N R+T LSLA G VP +G L EL +LS ++ + +
Sbjct: 307 ELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLF 366
Query: 144 IGNLAKLEELYIDSCGASGEIPSTF-AKLHNMQILRASDAHFTGK---IPDFIGNWTKLT 199
+ F + + P + L
Sbjct: 367 GDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLK 426
Query: 200 ALRLQGNSFQ-GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258
++ + + I ++ +L L+ + ++ S + + +D + A
Sbjct: 427 DTQIGNLTNRITFISKAIQRLTKLQIIYFAN-----SPFTYDNIAVDWEDANSDYAKQYE 481
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKS----- 313
L++L ++L Q+P L+++ L L + N +
Sbjct: 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541
Query: 314 ------ENLQNIDLSYNHLSGPFPSWVTSSLQ----MNLAVNNFTFDGSNISVFPGLQCL 363
+Q + YN+L S + ++ N + F L
Sbjct: 542 DDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRH----LEAFGTNVKL 597
Query: 364 QR 365
Sbjct: 598 TD 599
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-34
Identities = 56/369 (15%), Positives = 112/369 (30%), Gaps = 49/369 (13%)
Query: 22 SALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFL 81
AL+ + + S N I N +L +T L
Sbjct: 279 EALDGKNWRYYSGTINNTIHSLNWNFNKELDMW----------GDQPGVDLDNNGRVTGL 328
Query: 82 KIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK--------ELNLLSLAN 133
+ G +P IG L+ L +LS + + R G+ + + + +
Sbjct: 329 SLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVS-GRLFGDEELTPDMSEERKHRIRMHY 387
Query: 134 NNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG 193
+ L++ + + L + QI ++ I I
Sbjct: 388 KKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTN--RITFISKAIQ 445
Query: 194 NWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRN 253
TKL + + F + + A+ + + + +S +LK+L D+ L N
Sbjct: 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELS-----WSNLKDLTDVELYN 500
Query: 254 ALITGTIPSGIGELQNLQTLDLSFNNLTG---------QIPRTLFNIDSLNYLFLGNNSL 304
+P + +L LQ+L+++ N ++ + ++G N+L
Sbjct: 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560
Query: 305 SGTLPTQKS----ENLQNIDLSYNHLSGPFPSWVT-SSLQM-NLAVNNFTFDGSNI--SV 356
P S L +D +N + ++ T L L N I
Sbjct: 561 EE-FPASASLQKMVKLGLLDCVHNKVRHL-EAFGTNVKLTDLKLDYNQIE----EIPEDF 614
Query: 357 FPGLQCLQR 365
++
Sbjct: 615 CAFTDQVEG 623
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 3e-08
Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 3/132 (2%)
Query: 210 GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQN 269
I + A E+L + + S +++ + N + + + +
Sbjct: 266 EYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNW-NFNKELDMWGDQPGVDLDNNGR 324
Query: 270 LQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT--LPTQKSENLQNIDLSYNHLS 327
+ L L+ G++P + + L L G +S + + L + + + +
Sbjct: 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIR 384
Query: 328 GPFPSWVTSSLQ 339
+ Q
Sbjct: 385 MHYKKMFLDYDQ 396
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-37
Identities = 50/287 (17%), Positives = 107/287 (37%), Gaps = 21/287 (7%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
I E K+ + L S + + L L+ N S +L +L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
LL+L++N ++ +L+ L L +++ + +++ L A++ + + +
Sbjct: 62 LLNLSSNVLYE--TLDLESLSTLRTLDLNNN----YV-QELLVGPSIETLHAANNNIS-R 113
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKN 245
+ + L N + ++ L + I V+ + + S
Sbjct: 114 VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA-ELAASSDT 170
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
L+ L+L+ I + + L+TLDLS N L + + + ++ L NN L
Sbjct: 171 LEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 306 GTLPT--QKSENLQNIDLSYNHLS-GPFPSWVTSSLQM-NLAVNNFT 348
+ + S+NL++ DL N G + + + ++ +A
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 4e-22
Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 16/230 (6%)
Query: 139 ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKL 198
A+ N + + + + S N++ L S + + +TKL
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258
L L N L L++L +L +++ Y L +++ L N I+
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV--QELL---VGPSIETLHAANNNIS- 112
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ----KSE 314
+ Q + + L+ N +T + YL L N + T+ S+
Sbjct: 113 RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSD 169
Query: 315 NLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCL 363
L++++L YN + V + L+ +L+ N F G G+ +
Sbjct: 170 TLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWI 219
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 2e-37
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 19/262 (7%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
L L L L ++ + + S + NL+++ L+L N L N+ LN
Sbjct: 102 DISALQNLTNLRELYLNEDNISDI--SPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLN 158
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L++ + I NL L L ++ P A L ++ A T
Sbjct: 159 YLTVTESKVKD--VTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKN 245
P + N T+L +L++ N P L+ L+ L L I I S ++ V L
Sbjct: 215 TP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI----SDINAVKDLTK 266
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
LK L++ + I+ S + L L +L L+ N L + + + +L LFL N ++
Sbjct: 267 LKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324
Query: 306 GTLPTQKSENLQNIDLSYNHLS 327
P + + D + +
Sbjct: 325 DIRPLASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 6e-35
Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 25/299 (8%)
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
+ + L L +L ++ N T P + NL +LT L + N + L NL L L
Sbjct: 60 QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDISA--LQNLTNLREL 115
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
L +N S + NL K+ L + + S + + + L +++ P
Sbjct: 116 YLNEDNISD--ISPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP 172
Query: 190 DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLK 247
I N T L +L L N + P L+ L SL I + + V ++ L
Sbjct: 173 --IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQI----TDITPVANMTRLN 224
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
L + N IT P + L L L++ N ++ + ++ L L +G+N +S
Sbjct: 225 SLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDI 280
Query: 308 LPTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFTFDGSNISVFPGLQCL 363
L ++ L+ N L + ++L L+ N+ T D ++ +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT-DIRPLASLSKMDSA 338
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-34
Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 22/296 (7%)
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
L + + T + L +T L +A + + + L L L
Sbjct: 16 FPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVASI--QGIEYLTNLEYL 71
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
+L N + + NL KL LYI + + S L N++ L ++ + + P
Sbjct: 72 NLNGNQITD--ISPLSNLVKLTNLYIGTNKIT--DISALQNLTNLRELYLNEDNISDISP 127
Query: 190 DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDL 249
+ N TK+ +L L N S LS + L L +++ + + +L +L L
Sbjct: 128 --LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKV--KDVTPIANLTDLYSL 182
Query: 250 SLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP 309
SL I P + L +L N +T P + N+ LN L +GNN ++ P
Sbjct: 183 SLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP 238
Query: 310 TQKSENLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCLQ 364
L +++ N +S + L+M N+ N + +ISV L L
Sbjct: 239 LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQIS----DISVLNNLSQLN 290
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 8e-27
Identities = 53/243 (21%), Positives = 88/243 (36%), Gaps = 21/243 (8%)
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182
L L N +LA+ + + T +L ++ L +
Sbjct: 2 AATLATLPAPINQIF-----PDADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGE 54
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242
I I T L L L GN P LS L L +L I + + + +
Sbjct: 55 KVA-SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQN 108
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
L NL++L L I+ P + L + +L+L N+ + L N+ LNYL + +
Sbjct: 109 LTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTES 165
Query: 303 SLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQ 361
+ P +L ++ L+YN + P +SL VN T +I+ +
Sbjct: 166 KVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQIT----DITPVANMT 221
Query: 362 CLQ 364
L
Sbjct: 222 RLN 224
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-36
Identities = 54/315 (17%), Positives = 112/315 (35%), Gaps = 22/315 (6%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
I E K+ + L S + + L L+ N S +L +L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
LL+L++N ++ +L+ L L +++ + +++ L A++ + + +
Sbjct: 62 LLNLSSNVLYE--TLDLESLSTLRTLDLNNN----YV-QELLVGPSIETLHAANNNIS-R 113
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKN 245
+ + L N + ++ L + I V+ + + S
Sbjct: 114 VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA-ELAASSDT 170
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
L+ L+L+ I + + L+TLDLS N L + + + ++ L NN L
Sbjct: 171 LEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 306 GTLPT--QKSENLQNIDLSYNHLS-GPFPSWVTSSLQM-NLAVNNFTF-DGSNISVFPGL 360
+ + S+NL++ DL N G + + + ++ +A G N
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 361 QCLQRNFPCNRNAPR 375
C + P
Sbjct: 287 TLGHYGAYCCEDLPA 301
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 7e-25
Identities = 29/281 (10%), Positives = 72/281 (25%), Gaps = 21/281 (7%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTG-PLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNL 123
+ + + +L + N + L L+L +N V ++
Sbjct: 133 TMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV-VF 190
Query: 124 KELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAH 183
+L L L++N + + PE + A + + + + I N++
Sbjct: 191 AKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNG 248
Query: 184 F-TGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDF--- 239
F G + DF ++ + + + + + F
Sbjct: 249 FHCGTLRDFFSKNQRVQTVAK--QTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADR 306
Query: 240 --VMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNY 296
+ K LS + + + + +D + + +
Sbjct: 307 LIALKRKEHALLSGQGSETER-LECERENQARQREIDALKEQYR-TVIDQVTLRKQAKIT 364
Query: 297 LFLGNNSLSG--TLPTQKSENLQNI---DLSYNHLSGPFPS 332
L +L + + L + L
Sbjct: 365 LEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEE 405
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 3e-21
Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 16/230 (6%)
Query: 139 ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKL 198
A+ N + + + + S N++ L S + + +TKL
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258
L L N L L++L +L ++ ++ + ++ +++ L N I+
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLN-----NNYVQELLVGPSIETLHAANNNIS- 112
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT----QKSE 314
+ Q + + L+ N +T + YL L N + T+ S+
Sbjct: 113 RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSD 169
Query: 315 NLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCL 363
L++++L YN + V + L+ +L+ N F G G+ +
Sbjct: 170 TLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWI 219
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-36
Identities = 68/298 (22%), Positives = 110/298 (36%), Gaps = 21/298 (7%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
L L L L T P + NL+ L L ++ N S L L L
Sbjct: 149 ISALSGLTSLQQLSFGNQV-TDLKP--LANLTTLERLDISSNKVSDISV--LAKLTNLES 203
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L NN S +G L L+EL ++ T A L N+ L ++ +
Sbjct: 204 LIATNNQISD--ITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 259
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
P + TKLT L+L N P L+ L +L +L +++ + + +LKNL
Sbjct: 260 P--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL--EDISPISNLKNLTY 313
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L+L I+ P + L LQ L N ++ +L N+ ++N+L G+N +S
Sbjct: 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLT 369
Query: 309 PTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQMNLAVNNFTFDGSNISVFPGLQCLQ 364
P + + L+ + ++ S V + IS
Sbjct: 370 PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPD 427
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-33
Identities = 66/284 (23%), Positives = 100/284 (35%), Gaps = 16/284 (5%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
L L L L N + + +G L+ L LSL N L +L L
Sbjct: 192 ISVLAKLTNLESLIATNNQISDI--TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTD 247
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L LANN S + L KL EL + + S P A L + L ++
Sbjct: 248 LDLANNQISN--LAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 303
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
P I N LT L L N+ P +S L L+ L + S + + +L N+
Sbjct: 304 P--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINW 357
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
LS + I+ P + L + L L+ T N+ N + +L
Sbjct: 358 LSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPA 415
Query: 309 PTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGS 352
+ D+++N S T S + + TF G+
Sbjct: 416 TISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGT 459
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 6e-31
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 24/291 (8%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
L + + T + +L ++T L + L L ++ +NN
Sbjct: 23 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNN 78
Query: 135 NFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGN 194
+ + NL KL ++ +++ + P A L N+ L + T P + N
Sbjct: 79 QLTD--ITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKN 132
Query: 195 WTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNA 254
T L L L N+ S+LS L SL+ L + L +L L+ L + +
Sbjct: 133 LTNLNRLELSSNTISDI--SALSGLTSLQQLSFGNQVTDLKPLA---NLTTLERLDISSN 187
Query: 255 LITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE 314
++ S + +L NL++L + N ++ P L + +L+ L L N L
Sbjct: 188 KVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLT 243
Query: 315 NLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCLQ 364
NL ++DL+ N +S P + L L N + NIS GL L
Sbjct: 244 NLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS----NISPLAGLTALT 290
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 8e-30
Identities = 55/270 (20%), Positives = 93/270 (34%), Gaps = 22/270 (8%)
Query: 96 IGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYI 155
L+ L + V +L ++ L + L L ++
Sbjct: 20 DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINF 75
Query: 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS 215
+ + P L + + ++ P + N T LT L L N P
Sbjct: 76 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 129
Query: 216 LSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL 275
L L +L L +S S + + L +L+ LS N + + L L+ LD+
Sbjct: 130 LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFGNQVTD---LKPLANLTTLERLDI 184
Query: 276 SFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT 335
S N ++ L + +L L NN +S P NL + L+ N L
Sbjct: 185 SSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 242
Query: 336 SSLQM-NLAVNNFTFDGSNISVFPGLQCLQ 364
++L +LA N + N++ GL L
Sbjct: 243 TNLTDLDLANNQIS----NLAPLSGLTKLT 268
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-26
Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 15/241 (6%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
L +L LT L + N + P + L++LT L L N S P L L L
Sbjct: 236 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L L N I NL L L + S P + L +Q L + +
Sbjct: 292 LELNENQLED--ISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-- 345
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
+ N T + L N P L+ L + L ++D + ++ +++ ++
Sbjct: 346 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 403
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
+ + P+ I + + D+++N + + + G + SGT+
Sbjct: 404 VKNVTGALI--APATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFSGTV 460
Query: 309 P 309
Sbjct: 461 T 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 5e-11
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 16/151 (10%)
Query: 215 SLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLD 274
L + I+ I+ ++ L L +T T+ +L + TL
Sbjct: 2 PLGSATITQDTPINQIFTDTA-------LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQ 52
Query: 275 LSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWV 334
+ + +++L + NN L+ P + L +I ++ N ++ P
Sbjct: 53 ADRLGIK--SIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLAN 110
Query: 335 TSSLQM-NLAVNNFTFDGSNISVFPGLQCLQ 364
++L L N T +I L L
Sbjct: 111 LTNLTGLTLFNNQIT----DIDPLKNLTNLN 137
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-35
Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 34/194 (17%)
Query: 379 FSIKCGGPQMR-ADNIVYEADNSSLSASSYVVTSTEKWAVSNVGLFNEKENPAYVLNTLA 437
+++ GG I Y D Y +
Sbjct: 8 WAVNAGGESHVDVHGIHYRKDPLEGRVGR---------------------ASDYGMKLPI 46
Query: 438 QMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVF 497
+ LYQT R S Y E G Y + L FAE + +VF
Sbjct: 47 LRSNPEDQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVY--------FAQSQQKVF 98
Query: 498 DIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLL---WAGKGTCCVPTQG 554
D+ + G KD DI G + A + ++ + L + + GK +
Sbjct: 99 DVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGY 157
Query: 555 DYGPAISALSAVSA 568
P + AL +
Sbjct: 158 YDNPKVCALFIMKG 171
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-35
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 22/234 (9%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
P++ L +L + ID LP + + L L+LA N +P + +L L
Sbjct: 96 FPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLR 153
Query: 128 LLSLANNNFSGALPPEIGN---------LAKLEELYIDSCGASGEIPSTFAKLHNMQILR 178
LS+ LP + + L L+ L ++ G +P++ A L N++ L+
Sbjct: 154 ELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLK 212
Query: 179 ASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSL- 237
++ + + I + KL L L+G + P A L+ L + D S+L
Sbjct: 213 IRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKD----CSNLL 267
Query: 238 ---DFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTL 288
+ L L+ L LR + +PS I +L + + +L Q+ +
Sbjct: 268 TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP-PHLQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 1e-34
Identities = 59/304 (19%), Positives = 98/304 (32%), Gaps = 52/304 (17%)
Query: 52 CHITKLRVYALNKKG--VIPEEL--VTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSL 107
+ ++ + + L T L++ P LS L +++
Sbjct: 53 ANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTI 111
Query: 108 AHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPST 167
+P + L L+LA N ALP I +L +L EL I +C E+P
Sbjct: 112 DAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEP 169
Query: 168 FAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRI 227
A L +LRL+ + +P+S++ L
Sbjct: 170 LAST---------------DASGEHQGLVNLQSLRLEWTGIRS-LPASIANL-------- 205
Query: 228 SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRT 287
+NLK L +RN+ ++ + I L L+ LDL P
Sbjct: 206 ----------------QNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPI 248
Query: 288 LFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVT--SSLQMNLA 343
L L L + S TLP + L+ +DL PS + + + L
Sbjct: 249 FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILV 308
Query: 344 VNNF 347
+
Sbjct: 309 PPHL 312
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 5e-33
Identities = 44/264 (16%), Positives = 86/264 (32%), Gaps = 24/264 (9%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFS 137
L + P + R N + +
Sbjct: 14 RENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETRTGRALK 69
Query: 138 GALPPEIGNLA--KLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNW 195
A + + L + S + P +L ++Q + A ++PD + +
Sbjct: 70 -ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQF 126
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS---------SLDFVMSLKNL 246
L L L N + +P+S++ L L L I ++ + L NL
Sbjct: 127 AGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185
Query: 247 KDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306
+ L L I ++P+ I LQNL++L + + L+ + + ++ L L L +
Sbjct: 186 QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALR 243
Query: 307 TLPTQ--KSENLQNIDLS-YNHLS 327
P L+ + L ++L
Sbjct: 244 NYPPIFGGRAPLKRLILKDCSNLL 267
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 3e-25
Identities = 44/270 (16%), Positives = 86/270 (31%), Gaps = 30/270 (11%)
Query: 95 FIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154
+ S L + P L + + N +
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWH----SAWRQANSNNPQIET 62
Query: 155 IDSCGASGEIPSTF--AKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPI 212
+ A A L + PD + L + + +
Sbjct: 63 R-TGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-L 119
Query: 213 PSSLSKLASLESLRISDIYFVS--SSLDFVMSLKNLKDLSLRNALITGTIPSGIG----- 265
P ++ + A LE+L ++ + +S+ SL L++LS+R +P +
Sbjct: 120 PDTMQQFAGLETLTLARNPLRALPASIA---SLNRLRELSIRACPELTELPEPLASTDAS 176
Query: 266 ----ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNI 319
L NLQ+L L + + +P ++ N+ +L L + N+ LS L L+ +
Sbjct: 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234
Query: 320 DLSYNHLSGPFPSWVT--SSLQ-MNLAVNN 346
DL +P + L+ + L +
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCS 264
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 9e-23
Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 26/226 (11%)
Query: 117 PRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQI 176
+ L + + + + A +N QI
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRW----HSAWRQANSNNPQI 60
Query: 177 LRASDAHFTGKIPDFIGNWT--KLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYF 232
+ D + + T AL L+ P +L+ L+ + I +
Sbjct: 61 ETRTGRALK-ATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLME 118
Query: 233 VSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID 292
+ ++ L+ L+L + +P+ I L L+ L + ++P L + D
Sbjct: 119 LPDTMQ---QFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174
Query: 293 ---------SLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLS 327
+L L L + +LP + NL+++ + + LS
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 8e-19
Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 23/204 (11%)
Query: 138 GALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTK 197
G+ + + E LY A ++ + H + N
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNN 57
Query: 198 LTALRLQGNSFQGPIPSSLSKLAS--LESLRISDIYFVSSSL-DFVMSLKNLKDLSLRNA 254
G + + L +L + + D L +L+ +++ A
Sbjct: 58 PQIETRTGRALKA-TADLLEDATQPGRVALELRSVPL--PQFPDQAFRLSHLQHMTIDAA 114
Query: 255 LITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP----- 309
+ +P + + L+TL L+ N L +P ++ +++ L L + LP
Sbjct: 115 GLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172
Query: 310 ------TQKSENLQNIDLSYNHLS 327
Q NLQ++ L + +
Sbjct: 173 TDASGEHQGLVNLQSLRLEWTGIR 196
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 10/98 (10%), Positives = 25/98 (25%), Gaps = 7/98 (7%)
Query: 233 VSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID 292
+ SS ++L + + + + Q D + + + N +
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSN 56
Query: 293 SLNYLFLGNNSLS---GTLPTQKSENLQNIDLSYNHLS 327
+ +L L ++L L
Sbjct: 57 NPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP 94
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-33
Identities = 61/291 (20%), Positives = 98/291 (33%), Gaps = 17/291 (5%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
E++ L I R P+ +L L L+L N S L L+
Sbjct: 300 LEDVPKHFKWQSLSIIRCQLKQ-FPTL--DLPFLKSLTLTMNKGSISFK--KVALPSLSY 354
Query: 129 LSLANNNFS--GALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG 186
L L+ N S G L L + GA + + F L +Q L +
Sbjct: 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKR 413
Query: 187 KIP-DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS-LK 244
+ KL L + + + L SL +L+++ F ++L V +
Sbjct: 414 VTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT 473
Query: 245 NLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
NL L L + L LQ L++S NNL + SL+ L N +
Sbjct: 474 NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533
Query: 305 SGTLPT--QKSENLQNIDLSYNHLS-----GPFPSWVTSSLQMNLAVNNFT 348
+ ++L +L+ N ++ F WV Q + V T
Sbjct: 534 ETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMT 584
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-33
Identities = 50/315 (15%), Positives = 95/315 (30%), Gaps = 21/315 (6%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK 124
K + L +L + R L L+ L L N P L
Sbjct: 45 KILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLT 104
Query: 125 ELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCG-ASGEIPSTFAKLHNMQILRASDAH 183
L L + IG L L++L + S ++P+ F+ L N+ + S +
Sbjct: 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164
Query: 184 FTGKIPDFIGNWTKLTA----LRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSL-D 238
+ + + L + N I + L L + + S+ +
Sbjct: 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKT 223
Query: 239 FVMSLKNLKDLSLRNALITGTI------PSGIGELQNLQT--LDLSFNNLTGQIPRTLFN 290
+ +L L L PS + L ++ L++ N
Sbjct: 224 CLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHC 283
Query: 291 IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ-MNLAVNNFTF 349
+ +++ + L S+ K Q++ + L FP+ L+ + L +N +
Sbjct: 284 LANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQ-FPTLDLPFLKSLTLTMNKGSI 342
Query: 350 DGSNISVFPGLQCLQ 364
L L
Sbjct: 343 ----SFKKVALPSLS 353
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 5e-33
Identities = 49/314 (15%), Positives = 87/314 (27%), Gaps = 24/314 (7%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P+++ + + N N S L L L+ + L L+
Sbjct: 26 VPDDI--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG- 186
L L N P L LE L + +L ++ L +
Sbjct: 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC 143
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKL----ASLESLRISD--IYFVSSSLDFV 240
K+P + N T L + L N Q + L L SL +S I F+
Sbjct: 144 KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID-------- 292
+ L L L N + + + + L L L + +F
Sbjct: 204 IKLHEL-TLR-GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261
Query: 293 SLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFTF 349
+++ L + N+ + L+ + Q ++
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK- 320
Query: 350 DGSNISVFPGLQCL 363
P L+ L
Sbjct: 321 -QFPTLDLPFLKSL 333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-08
Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 10/120 (8%)
Query: 45 TFDNGATCHITKLRVYALN------KKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGN 98
+G +T L L K + LTFL + +
Sbjct: 438 IDFDGIFLGLTSLNT--LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDT 495
Query: 99 LSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDS 157
L RL LL+++HN L L+ L + N + L + +
Sbjct: 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTN 554
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-06
Identities = 15/73 (20%), Positives = 23/73 (31%)
Query: 65 KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLK 124
+ + TL L L + N S L L+ L + N K
Sbjct: 486 EQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPK 545
Query: 125 ELNLLSLANNNFS 137
L +L NN+ +
Sbjct: 546 SLAFFNLTNNSVA 558
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 8e-30
Identities = 62/351 (17%), Positives = 108/351 (30%), Gaps = 33/351 (9%)
Query: 77 YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNF 136
+ L + F L L +L+LA+N + L L +L+L+ N
Sbjct: 267 SVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326
Query: 137 SGALPPEI-GNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG--------- 186
L L K+ + + + TF L +Q L D T
Sbjct: 327 G-ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPD 385
Query: 187 ------KIPDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISD--IYFVSSSL 237
K+ + L N + I L ++ L+ L ++ S
Sbjct: 386 IFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQ 445
Query: 238 DFVMSLKNLKDLSLRNALITGTIPSGIGE-----LQNLQTLDLSFNNLTGQIPRTLFNID 292
+L+ L L ++ + + L +LQ L L+ N L P ++
Sbjct: 446 TPSE-NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504
Query: 293 SLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGS 352
+L L L +N L+ NL+ +D+S N L P P S +++ N F +
Sbjct: 505 ALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564
Query: 353 NISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLS 403
+ L I C P + ++
Sbjct: 565 LSTFINWLNHTNVTIAGPPA-------DIYCVYPDSFSGVSLFSLSTEGCD 608
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 8e-27
Identities = 60/327 (18%), Positives = 113/327 (34%), Gaps = 30/327 (9%)
Query: 62 LNKKGVIPEELVTLQYLTFLKIDRNFFTG-PLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
L+ + L+ LT L + +N L G L+ L + + N EL
Sbjct: 109 LSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168
Query: 121 GNLKELNL--LSLANNNFSGALPPEIGNLAK------LEELYIDSCGASGEIPSTFAK-- 170
L+ L SLA N+ + + G LE L + G + +I F+
Sbjct: 169 EPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAI 228
Query: 171 ----------LHNMQILRASDAHFTGKIPDFIGNWTK--LTALRLQGNSFQGPIPSSLSK 218
H++ + + + + L L
Sbjct: 229 SKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFET 288
Query: 219 LASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSF 277
L L+ L ++ + + L NL+ L+L L+ + S L + +DL
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG-ELYSSNFYGLPKVAYIDLQK 347
Query: 278 NNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS 337
N++ +T ++ L L L +N+L+ T+ ++ +I LS N L P ++
Sbjct: 348 NHIAIIQDQTFKFLEKLQTLDLRDNALT-TIHF--IPSIPDIFLSGNKLVT-LPKINLTA 403
Query: 338 LQMNLAVNNFTFDGSNISVFPGLQCLQ 364
++L+ N + + + LQ
Sbjct: 404 NLIHLSENRLE-NLDILYFLLRVPHLQ 429
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 1e-26
Identities = 70/358 (19%), Positives = 123/358 (34%), Gaps = 53/358 (14%)
Query: 44 CTFDNG-ATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRL 102
C+FD A L +P+ L T + L + N+ S L +L
Sbjct: 2 CSFDGRIAFYRFCNLTQ--------VPQVLNTTERL---LLSFNYIRTVTASSFPFLEQL 50
Query: 103 TLLSLAHNVFSGPVPRE-LGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGA 160
LL L + +E NL L +L L ++ L P+ L L EL + CG
Sbjct: 51 QLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGL 109
Query: 161 SGEI--PSTFAKLHNMQILRASDAHFTG-KIPDFIGNWTKLTALRLQGNSFQGPIPSSLS 217
S + F L + L S + G L ++ N L
Sbjct: 110 SDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169
Query: 218 KLA--SLESLRISDIYFVS-SSLDFVMSLKNLKDLSLR---------NALITGTIPSGIG 265
L +L ++ S S+D+ + +++ L ITG + I
Sbjct: 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAIS 229
Query: 266 ELQ--------NLQTLDLSFNNLTGQIPRTLF---NIDSLNYLFLGNNSLSGTLPT--QK 312
+ Q ++ F+N+ + F S+ +L L + + +
Sbjct: 230 KSQAFSLILAHHIMGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFET 288
Query: 313 SENLQNIDLSYNHLS----GPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCLQR 365
++L+ ++L+YN ++ F +LQ+ NL+ N S+ F GL +
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYG--LDNLQVLNLSYNLLGELYSS--NFYGLPKVAY 342
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-28
Identities = 52/311 (16%), Positives = 98/311 (31%), Gaps = 56/311 (18%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSG------------P 115
+P E ++ T + + P G + + L +
Sbjct: 26 MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS 85
Query: 116 VPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQ 175
+P +L+ L + N+ + LP +L L + + L +
Sbjct: 86 LPELPPHLESLVA---SCNSLT-ELPELPQSLKSLLVDNNNLK----ALSDLPPLL---E 134
Query: 176 ILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235
L S+ K+P+ + N + L + + NS + +P SLE + +
Sbjct: 135 YLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKK-LPDLPP---SLEFIAAGNNQL--E 186
Query: 236 SLDFVMSLKNLKDLSLRNALITG------------------TIPSGIGELQNLQTLDLSF 277
L + +L L + N + + L L T+
Sbjct: 187 ELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADN 246
Query: 278 NNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS 337
N L +P SL L + +N L+ LP ++L +D+S N SG +
Sbjct: 247 NLLK-TLPDL---PPSLEALNVRDNYLT-DLPEL-PQSLTFLDVSENIFSG-LSELPPNL 299
Query: 338 LQMNLAVNNFT 348
+N + N
Sbjct: 300 YYLNASSNEIR 310
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-28
Identities = 57/310 (18%), Positives = 110/310 (35%), Gaps = 51/310 (16%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
I V+ +L + T +P N+ T A + + P G +E+
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 128 L-------------LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNM 174
+ L L N S +LP + LE L + E+P L ++
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPELPQSLKSL 116
Query: 175 QILRASDAHFTG----------------KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSK 218
+ + + K+P+ + N + L + + NS + +P
Sbjct: 117 LVDNNNLKALSDLPPLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNSLKK-LPDLPP- 173
Query: 219 LASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFN 278
SLE + + L + +L L + N + +P +L+++ N
Sbjct: 174 --SLEFIAAGNNQL--EELPELQNLPFLTAIYADNNSLK-KLPD---LPLSLESIVAGNN 225
Query: 279 NLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSL 338
L L N+ L ++ NN L TLP +L+ +++ N+L+ P S
Sbjct: 226 ILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPP-SLEALNVRDNYLTD-LPELPQSLT 280
Query: 339 QMNLAVNNFT 348
++++ N F+
Sbjct: 281 FLDVSENIFS 290
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-28
Identities = 52/314 (16%), Positives = 111/314 (35%), Gaps = 66/314 (21%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P+ +L+++ N LP NL LT + +N +P +L+ +
Sbjct: 168 LPDLPPSLEFIA---AGNNQLEE-LPEL-QNLPFLTAIYADNNSLKK-LPDLPLSLESIV 221
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
NN PE+ NL L +Y D+ + + +++ L D + T
Sbjct: 222 A---GNNILE--ELPELQNLPFLTTIYADNN----LLKTLPDLPPSLEALNVRDNYLT-D 271
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
+P+ + T L + +P +L L + S I + +L+
Sbjct: 272 LPELPQSLTFLDVSENIFSGLS-ELPPNLYYL-NASSNEIRSL---------CDLPPSLE 320
Query: 248 DLSLRNALITGTIPSGIGELQ-----------------NLQTLDLSFNNLTGQIPRTLFN 290
+L++ N + +P+ L+ NL+ L + +N L + P +
Sbjct: 321 ELNVSNNKLI-ELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLR-EFPDIPES 378
Query: 291 ----------------IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSW- 333
+L L + N L P E+++++ ++ + P+
Sbjct: 379 VEDLRMNSHLAEVPELPQNLKQLHVETNPLR-EFP-DIPESVEDLRMNSERVVDPYEFAH 436
Query: 334 -VTSSLQMNLAVNN 346
T L+ ++ ++
Sbjct: 437 ETTDKLEDDVFEHH 450
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-27
Identities = 59/311 (18%), Positives = 110/311 (35%), Gaps = 47/311 (15%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPS---------------FIG 97
H+ L N +PE +L+ L + + P +
Sbjct: 92 HLESLVASC-NSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQ 150
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
N S L ++ + +N +P +L+ + NN PE+ NL L +Y D+
Sbjct: 151 NSSFLKIIDVDNNSLKK-LPDLPPSLEFIAA---GNNQLEE--LPELQNLPFLTAIYADN 204
Query: 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLS 217
+ +++ + A + ++P+ + N LT + N + +P
Sbjct: 205 N----SLKKLPDLPLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPP 257
Query: 218 KLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSF 277
SLE+L + D Y ++L L + + + + NL L+ S
Sbjct: 258 ---SLEALNVRDNYLTD----LPELPQSLTFLDVSENIFS-GLSELPP---NLYYLNASS 306
Query: 278 NNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS 337
N + + SL L + NN L LP L+ + S+NHL+ P +
Sbjct: 307 NEIR-SLCDLP---PSLEELNVSNNKLI-ELPAL-PPRLERLIASFNHLAE-VPELPQNL 359
Query: 338 LQMNLAVNNFT 348
Q+++ N
Sbjct: 360 KQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-24
Identities = 46/278 (16%), Positives = 92/278 (33%), Gaps = 52/278 (18%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P+ ++L+ + N LP + NL LT + +N+ +P +L+ LN
Sbjct: 210 LPDLPLSLESIV---AGNNILEE-LPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALN 263
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
+ + LP +L L+ + L L AS +
Sbjct: 264 VRDNYLTD----LPELPQSLTFLDVSENIFS----GLSELPPNL---YYLNASSN----E 308
Query: 188 IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
I L L + N +P+ +L E L S + + + +NLK
Sbjct: 309 IRSLCDLPPSLEELNVSNNKLIE-LPALPPRL---ERLIASFNHL--AEVP--ELPQNLK 360
Query: 248 DLSLRNALITGTIPSGIGELQ----------------NLQTLDLSFNNLTGQIPRTLFNI 291
L + + P ++ NL+ L + N L + P
Sbjct: 361 QLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR-EFPD---IP 415
Query: 292 DSLNYLFLGNNSLSG--TLPTQKSENLQNIDLSYNHLS 327
+S+ L + + + + ++ L++ ++H
Sbjct: 416 ESVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 1e-27
Identities = 67/368 (18%), Positives = 116/368 (31%), Gaps = 51/368 (13%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVF 112
HIT L + N +P L+ L + N T LP L L++ S
Sbjct: 62 HITTLVIPD-NNLTSLPALPPELRTLE---VSGNQLTS-LPVLPPGLLELSIFSNPLT-- 114
Query: 113 SGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLH 172
+P L +L + N + +LP L +EL + + +P+ ++L
Sbjct: 115 --HLPALPSGLCKLWIF---GNQLT-SLPVLPPGL---QELSVSDNQLA-SLPALPSELC 164
Query: 173 NMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESL--RISDI 230
L A + T +P L L + N +P+ S+L L + R++ +
Sbjct: 165 K---LWAYNNQLT-SLPMLPSG---LQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSL 216
Query: 231 YFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFN 290
LK+L + +T ++P L+ L +S N LT +P
Sbjct: 217 ---------PALPSGLKELIVSGNRLT-SLPVLPS---ELKELMVSGNRLT-SLPM---L 259
Query: 291 IDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFT 348
L L + N L+ LP + ++L N LS +
Sbjct: 260 PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPII 318
Query: 349 FDGSNISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADNSSLSASSYV 408
+ P + P R E + + S
Sbjct: 319 RFDMAGASAPRETRALHLAAADWLVPAREGEPAPAD----RWHMFGQEDNADAFSLFLDR 374
Query: 409 VTSTEKWA 416
++ TE +
Sbjct: 375 LSETENFI 382
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 2e-12
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 18/153 (11%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L + + +P L A + +L I D +SL L+ L +
Sbjct: 40 NGNAVLNVGESGLTT-LPDCL--PAHITTLVIPDNNL--TSLPA--LPPELRTLEVSGNQ 92
Query: 256 ITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSEN 315
+T ++P L L +L L L++ N L+ +LP
Sbjct: 93 LT-SLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGNQLT-SLPVL-PPG 142
Query: 316 LQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFT 348
LQ + +S N L+ P+ + ++ N T
Sbjct: 143 LQELSVSDNQLAS-LPALPSELCKLWAYNNQLT 174
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 4e-27
Identities = 59/301 (19%), Positives = 103/301 (34%), Gaps = 25/301 (8%)
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130
E +TL + + + + + ++ LL+L + L
Sbjct: 40 EDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLY 99
Query: 131 LANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDAHFTGKI 188
+ N LPP + N+ L L ++ S +P F + L S+ + +I
Sbjct: 100 MGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RI 156
Query: 189 PDFI-GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
D T L L+L N + SL + SL +S L + ++
Sbjct: 157 EDDTFQATTSLQNLQLSSNRLTH-VDLSL--IPSLFHANVSYN-----LLSTLAIPIAVE 208
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
+L + I + + L L L NNLT L N L + L N L
Sbjct: 209 ELDASHNSIN-VVRGPV--NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-K 262
Query: 308 LPT---QKSENLQNIDLSYNHLSG-PFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQC 362
+ K + L+ + +S N L +L++ +L+ N+ N F L+
Sbjct: 263 IMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLEN 322
Query: 363 L 363
L
Sbjct: 323 L 323
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-21
Identities = 54/299 (18%), Positives = 96/299 (32%), Gaps = 37/299 (12%)
Query: 63 NKKGVIPEE-LVTLQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVFSGPVPREL 120
N +P + LT L ++RN + LP I N +LT LS+++N
Sbjct: 103 NAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTF 161
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
L L L++N + + + L + S + ST A ++ L AS
Sbjct: 162 QATTSLQNLQLSSNRLT-HVDL--SLIPSLFHANV-----SYNLLSTLAIPIAVEELDAS 213
Query: 181 DAHFTG--------------------KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLA 220
N+ L + L N + + K+
Sbjct: 214 HNSINVVRGPVNVELTILKLQHNNLTDTAWL-LNYPGLVEVDLSYNELEKIMYHPFVKMQ 272
Query: 221 SLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNL 280
LE L IS+ V+ +L + LK L L + + + + L+ L L N++
Sbjct: 273 RLERLYISNNRLVALNLYG-QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330
Query: 281 TGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ 339
+ + + +L L L +N N+ + + L
Sbjct: 331 V-TLKLSTHH--TLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLC 386
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Query: 212 IPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNL 270
I S+L + I ++L N K ++ +N+ + +P+ + + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 271 QTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHL 326
+ L+L+ + +I F ++ L++G N++ LP Q L + L N L
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDL 129
Query: 327 S 327
S
Sbjct: 130 S 130
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 9e-27
Identities = 70/346 (20%), Positives = 123/346 (35%), Gaps = 54/346 (15%)
Query: 42 CDCTFDNG-ATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLS 100
C+C+ + CH + +PE + L + +N +
Sbjct: 7 CECSAQDRAVLCHRKRFVA--------VPEGI--PTETRLLDLGKNRIKTLNQDEFASFP 56
Query: 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCG 159
L L L N+ S P NL L L L +N +P + L+ L +L I
Sbjct: 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENK 115
Query: 160 ASGEIPSTFAKLHNMQILRASD--------AHFTG---------------KIPD--FIGN 194
+ F L+N++ L D F+G IP
Sbjct: 116 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 175
Query: 195 WTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNA 254
L LRL+ + S +L L+ L IS ++ + + NL LS+ +
Sbjct: 176 -HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 255 LITGTIPSG-IGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT-- 310
+T +P + L L+ L+LS+N ++ I ++ + L + L L+ +
Sbjct: 235 NLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLA-VVEPYA 291
Query: 311 -QKSENLQNIDLSYNHLS----GPFPSWVTSSLQ-MNLAVNNFTFD 350
+ L+ +++S N L+ F S +L+ + L N D
Sbjct: 292 FRGLNYLRVLNVSGNQLTTLEESVFHSV--GNLETLILDSNPLACD 335
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-26
Identities = 50/324 (15%), Positives = 87/324 (26%), Gaps = 35/324 (10%)
Query: 51 TCHITKLRVYALNKK-GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAH 109
+ + + IP+ L L + N + L +L L+
Sbjct: 4 VEVVPNITYQCMELNFYKIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 61
Query: 110 NVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTF 168
+L L+ L L N L L+ L++L +
Sbjct: 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLASLENFPI 120
Query: 169 AKLHNMQILRASDAHFT-GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRI 227
L ++ L + K+P++ N T L L L N Q + L L + L +
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180
Query: 228 SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRT 287
S L L + I G + L L L N + + +T
Sbjct: 181 S--------------------LDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKT 219
Query: 288 LFN------IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSG--PFPSWVTSSLQ 339
+ L N E L N+ + L+ + +
Sbjct: 220 CIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFN 279
Query: 340 MNLAVNNFTFDGSNISVFPGLQCL 363
V++F+ I
Sbjct: 280 CLTNVSSFSLVSVTIERVKDFSYN 303
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-25
Identities = 64/340 (18%), Positives = 109/340 (32%), Gaps = 41/340 (12%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFTGPLPS-FIGNLSRLTLLSLAHNVFSG------P 115
N I L L + NF + + I L+ L + L F
Sbjct: 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 246
Query: 116 VPRELGNLKELNLLSL---ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTF-AKL 171
L L L + + + + L + + S ++
Sbjct: 247 DKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGW 306
Query: 172 HNMQILRASDAHFT-----------------GKIPDFIGNWTKLTALRLQGN--SFQGPI 212
+++++ F G + L L L N SF+G
Sbjct: 307 QHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL-PSLEFLDLSRNGLSFKGCC 365
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQ 271
S SL+ L +S ++ S +F + L+ L+ L +++ + + L+NL
Sbjct: 366 SQSDFGTTSLKYLDLSFNGVITMSSNF-LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424
Query: 272 TLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLSG 328
LD+S + + SL L + NS + NL +DLS L
Sbjct: 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484
Query: 329 PFPSWVT--SSLQ-MNLAVNNFTFDGSNISVFPGLQCLQR 365
P+ SSLQ +N+A N +F L LQ+
Sbjct: 485 LSPTAFNSLSSLQVLNMASNQLKS--VPDGIFDRLTSLQK 522
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 61/303 (20%), Positives = 104/303 (34%), Gaps = 21/303 (6%)
Query: 35 DNNPAIVCDCTFDNGATCHITKLRVYALNKKG-VIPEELVTLQYLTFLKIDRNFFTGPLP 93
+ N + I + R+ L+ I + L ++ +
Sbjct: 240 EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD 299
Query: 94 -SFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEE 152
S+ L L++ F +L +LK L +N G E+ +L LE
Sbjct: 300 FSYNFGWQHLELVNCKFGQFP---TLKLKSLKRLTF----TSNKGGNAFSEV-DLPSLEF 351
Query: 153 LYIDSCG--ASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
L + G G + +++ L S + +L L Q ++ +
Sbjct: 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ 410
Query: 211 -PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQ 268
S L +L L IS + + L +L+ L + I EL+
Sbjct: 411 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 470
Query: 269 NLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYN 324
NL LDLS L Q+ T F ++ SL L + +N L ++P + +LQ I L N
Sbjct: 471 NLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTN 528
Query: 325 HLS 327
Sbjct: 529 PWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 56/240 (23%), Positives = 86/240 (35%), Gaps = 12/240 (5%)
Query: 55 TKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--VF 112
L + +L +L+ LTF G S + +L L L L+ N F
Sbjct: 307 QHLELVNCKFGQFPTLKLKSLKRLTFTSNK----GGNAFSEV-DLPSLEFLDLSRNGLSF 361
Query: 113 SGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIP-STFAKL 171
G + L L L+ N + L +LE L S F L
Sbjct: 362 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 420
Query: 172 HNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS-SLSKLASLESLRISDI 230
N+ L S H + L L++ GNSFQ ++L +L L +S
Sbjct: 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480
Query: 231 YFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF 289
S SL +L+ L++ + + ++P GI L +LQ + L N PR +
Sbjct: 481 QLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 8e-26
Identities = 65/357 (18%), Positives = 115/357 (32%), Gaps = 38/357 (10%)
Query: 16 GNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTL 75
G + N DC F + + + + E +TL
Sbjct: 2 GGQQRYNVKPRQPEYKCIDSNLQY---DCVFYD--------VHIDMQTQDVYFGFEDITL 50
Query: 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNN 135
+ + + + + ++ LL+L + L + N
Sbjct: 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNA 110
Query: 136 FSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDAHFTGKIPD--F 191
LPP + N+ L L ++ S +P F + L S+ + +I D F
Sbjct: 111 IR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTF 167
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL 251
T L L+L N + SL + SL +S + L + +++L
Sbjct: 168 QAT-TSLQNLQLSSNRLTH-VDLSL--IPSLFHANVSY-----NLLSTLAIPIAVEELDA 218
Query: 252 RNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT- 310
+ I + + L L L NNLT L N L + L N L +
Sbjct: 219 SHNSIN-VVRGPV--NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-KIMYH 272
Query: 311 --QKSENLQNIDLSYNHLSG-PFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCL 363
K + L+ + +S N L +L++ +L+ N+ N F L+ L
Sbjct: 273 PFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENL 329
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 93.5 bits (232), Expect = 8e-20
Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 29/295 (9%)
Query: 63 NKKGVIPEEL-VTLQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVFSGPVPREL 120
N +P + + LT L ++RN + LP I N +LT LS+++N
Sbjct: 109 NAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167
Query: 121 GNLKELNLLSLANNNFS----GALP------------PEIGNLAKLEELYIDSCGASGEI 164
L L L++N + +P + +EEL +
Sbjct: 168 QATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVR 227
Query: 165 PSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLES 224
+L IL+ + T N+ L + L N + + K+ LE
Sbjct: 228 GPVNVEL---TILKLQHNNLT-DTAWL-LNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 282
Query: 225 LRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQI 284
L IS+ V+ +L + LK L L + + + + L+ L L N++ +
Sbjct: 283 LYISNNRLVALNLYGQ-PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TL 339
Query: 285 PRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ 339
+ + +L L L +N N+ + + L
Sbjct: 340 KLSTHH--TLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLC 392
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 9e-26
Identities = 55/326 (16%), Positives = 110/326 (33%), Gaps = 34/326 (10%)
Query: 68 IPEELVTLQYLTFLKIDR-NFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKEL 126
+ L L L+I F+ L+ L L + + L +++++
Sbjct: 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDI 174
Query: 127 NLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFA--------KLHNMQILR 178
+ L+L + + L L+ + L + + S K +
Sbjct: 175 HHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234
Query: 179 ASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG---------PIPSSLSKL--ASLESLRI 227
+D F ++ + +L+ + + G + S L K+ ++ L I
Sbjct: 235 LTDESFN-ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHI 293
Query: 228 SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGE-LQNLQTLDLSFNNLTGQIPR 286
Y L+ +K +++ N+ + +P + L++L+ LDLS N + + +
Sbjct: 294 PQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLK 352
Query: 287 TLFNID---SLNYLFLGNNSLS----GTLPTQKSENLQNIDLSYNHLSGPFPS--WVTSS 337
SL L L N L +NL ++D+S N S W
Sbjct: 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKM 412
Query: 338 LQMNLAVNNFTFDGSNISVFPGLQCL 363
+NL+ + I L+ L
Sbjct: 413 RFLNLSSTGIRVVKTCI--PQTLEVL 436
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-25
Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 21/336 (6%)
Query: 35 DNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPS 94
+ A + + D + L + N L + + +K +
Sbjct: 181 LSESAFLLEIFADI--LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238
Query: 95 FIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154
L +L L + + L + + L+
Sbjct: 239 SFNELLKLLRYILELSEVE------FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLH 292
Query: 155 IDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ---GP 211
I ++ + ++ L ++ + ++ F + L L L N
Sbjct: 293 IPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLK 352
Query: 212 IPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQN 269
+ SL++L +S + + + + +++LKNL L + +P +
Sbjct: 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEK 411
Query: 270 LQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP 329
++ L+LS + + + +L L + NN+L + LQ + +S N L
Sbjct: 412 MRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLD-SFSLF-LPRLQELYISRNKLKTL 466
Query: 330 FPSWVTSSLQ-MNLAVNNFT-FDGSNISVFPGLQCL 363
+ + L M ++ N LQ +
Sbjct: 467 PDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKI 502
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-25
Identities = 52/322 (16%), Positives = 118/322 (36%), Gaps = 32/322 (9%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN-- 110
+ +L + AL+ + + L +++ + L + + L F LS + L L
Sbjct: 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208
Query: 111 -VFSGPVPRELGNLKELNLLSLANNNFS----GALPPEIGNLAKLEELYIDSCGASG--- 162
F + L+ + + L + + +L E+ D C +G
Sbjct: 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGD 268
Query: 163 ------EIPSTFAKLH--NMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS 214
++ S K+ ++ L + + K+ + ++ + S
Sbjct: 269 FNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCS 328
Query: 215 SLSKLASLESL-----RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIG---E 266
L SLE L + + Y +S+ + +L+ L L + ++
Sbjct: 329 FSQHLKSLEFLDLSENLMVEEYLKNSA--CKGAWPSLQTLVLSQNHLR-SMQKTGEILLT 385
Query: 267 LQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHL 326
L+NL +LD+S N +P + + + +L L + + + T + L+ +D+S N+L
Sbjct: 386 LKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNL 443
Query: 327 SGPFPSWVTSSLQMNLAVNNFT 348
F ++ ++ ++ N
Sbjct: 444 DS-FSLFLPRLQELYISRNKLK 464
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 51/339 (15%), Positives = 111/339 (32%), Gaps = 33/339 (9%)
Query: 53 HITKLRVYALNKKGVIPEE-LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNV 111
++ LR+ + I L L L+I + ++ + L+L +
Sbjct: 124 NLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183
Query: 112 FSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSC-------GASGEI 164
+ + L + L L + N + + + + + E+
Sbjct: 184 SAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243
Query: 165 PSTFAKLHNMQILRASDAHFTG------KIPDFIGNWTKLTALRLQ-----GNSFQGPIP 213
+ + + D G D + K+ + ++ +
Sbjct: 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLS 303
Query: 214 SSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL-RNALITGTIPSG--IGELQNL 270
+ S L ++ + + + F LK+L+ L L N ++ + + G +L
Sbjct: 304 TVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSL 363
Query: 271 QTLDLSFNNLT--GQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHL 326
QTL LS N+L + L + +L L + N+ +P Q E ++ ++LS +
Sbjct: 364 QTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGI 422
Query: 327 SGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQR 365
+ ++++ NN S L LQ
Sbjct: 423 RVVKTCIPQTLEVLDVSNNNLD------SFSLFLPRLQE 455
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 62/354 (17%), Positives = 113/354 (31%), Gaps = 66/354 (18%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRE 119
IP L + L + N T + + L +L L + F
Sbjct: 20 IPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS----- 72
Query: 120 LGNLKELNL---------------------LSLANNNFSG-ALPPEIGNLAKLEELYIDS 157
LG+L+ L+L L+L N + + NL L+ L I +
Sbjct: 73 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 132
Query: 158 CGASGEIP-STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
EI FA L ++ L + + + L L + +
Sbjct: 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFA 192
Query: 217 SKLASLESLRISDIY---FVSSSLDFVMSLKNLKDLSLRNALITG-------TIPSGIGE 266
L+S+ L + D F S L +K L+ R +++T + I E
Sbjct: 193 DILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILE 252
Query: 267 LQNLQTLDLSFNNLTGQIPRTLFNI---------DSLNYLFLGNNSLSGTLPT--QKSEN 315
L ++ D + N L G + ++ ++ L + L L T E
Sbjct: 253 LSEVEFDDCTLNGL-GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
Query: 316 LQNIDLSYNHLSGPFPSWVTSSLQ----MNLAVNNFTFDG-SNISVFPGLQCLQ 364
++ I + + + P + L+ ++L+ N + N + LQ
Sbjct: 312 VKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 4e-21
Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 16/259 (6%)
Query: 52 CHITKLRVYALNKKGVIPEEL-VTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN 110
C + L + ++ V+ E V + L I + + L + L ++ +++ ++
Sbjct: 261 CTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320
Query: 111 VFSGPVPRELGNLKELNLLSLANNNFSGALPPE---IGNLAKLEELYIDSCGAS--GEIP 165
+LK L L L+ N G L+ L + +
Sbjct: 321 KVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTG 380
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESL 225
L N+ L S F +PD K+ L L + + + + +LE L
Sbjct: 381 EILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVL 436
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
+S+ S F + L L++L + + T+P L + +S N L
Sbjct: 437 DVSNNNLDS----FSLFLPRLQELYISRNKLK-TLPDASL-FPVLLVMKISRNQLKSVPD 490
Query: 286 RTLFNIDSLNYLFLGNNSL 304
+ SL ++L N
Sbjct: 491 GIFDRLTSLQKIWLHTNPW 509
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 7e-25
Identities = 53/285 (18%), Positives = 88/285 (30%), Gaps = 48/285 (16%)
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL-- 128
+ ++L+ LT + +S L L+L + +G P L +L
Sbjct: 66 KSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNI 125
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L+L N +++ + L + +++L + AH
Sbjct: 126 LNLRNVSWAT-RDAWLAELQQW-------------------LKPGLKVLSIAQAHSLNFS 165
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
+ + + L+ L L N G + L+
Sbjct: 166 CEQVRVFPALSTLDLSDNPELGERGLISALCPL--------------------KFPTLQV 205
Query: 249 LSLRN---ALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNI-DSLNYLFLGNNSL 304
L+LRN +G + LQ LDLS N+L + LN L L L
Sbjct: 206 LALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265
Query: 305 SGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFT 348
+P L +DLSYN L + +L N F
Sbjct: 266 K-QVPKGLPAKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFL 309
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 1e-19
Identities = 51/292 (17%), Positives = 79/292 (27%), Gaps = 55/292 (18%)
Query: 88 FTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNL 147
F+ P P + + L V G LL + +I
Sbjct: 17 FSDPKPDWSSAFNCLGAA---------DVELYGGGRSLEYLLKRVDTEADLGQFTDIIKS 67
Query: 148 AKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNS 207
L+ L + + I ++ + + L L L+
Sbjct: 68 LSLKRLTVRAARIPSRILFGALRVLGI---------------------SGLQELTLENLE 106
Query: 208 FQGPIPSSLSKLA--SLESLRISDI----YFVSSSLDFVMSLKNLKDLSLRNALITGTIP 261
G P L + L L + ++ + LK LS+ A
Sbjct: 107 VTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSC 166
Query: 262 SGIGELQNLQTLDLSFNNLTGQI-------PRTLFNIDSLNYLFLGNNSLSGTLP--TQK 312
+ L TLDLS N G+ P + L G + SG
Sbjct: 167 EQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAA 226
Query: 313 SENLQNIDLSYNHLSGPFP----SWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
LQ +DLS+N L W + +NL+ V GL
Sbjct: 227 RVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK------QVPKGL 272
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 2e-17
Identities = 48/226 (21%), Positives = 73/226 (32%), Gaps = 19/226 (8%)
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTL--LSLAHNVFSGPVPR--ELGNLKEL 126
++ + L L ++ TG P + + L L+L + ++ EL +
Sbjct: 90 RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKP 149
Query: 127 NL--LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFA----KLHNMQILRAS 180
L LS+A + ++ L L + GE A K +Q+L
Sbjct: 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALR 209
Query: 181 DAHFT---GKIPDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISDIYFVSSS 236
+A G +L L L NS + S + L SL +S
Sbjct: 210 NAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVP 269
Query: 237 LDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTG 282
L L DLS N L PS EL + L L N
Sbjct: 270 KGLPAKLSVL-DLS-YNRL--DRNPS-PDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 5e-09
Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 13/167 (7%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLP----SFIGNLSRLTLLSLA 108
+ L + + E++ L+ L + N G L +L+L
Sbjct: 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALR 209
Query: 109 HNVF---SGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEI 164
+ SG +L L L++N+ A ++L L + G
Sbjct: 210 NAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVP 269
Query: 165 PSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGP 211
AKL +L S P ++ L L+GN F
Sbjct: 270 KGLPAKL---SVLDLSYNRLDR-NP-SPDELPQVGNLSLKGNPFLDS 311
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 66/324 (20%), Positives = 111/324 (34%), Gaps = 56/324 (17%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLS 100
C C+ C+ L +P + T L+++ N L+
Sbjct: 4 RCSCS-GTEIRCNSKGLTS--------VPTGI--PSSATRLELESNKLQSLPHGVFDKLT 52
Query: 101 RLTLLSLAHN--VFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSC 158
+LT LSL+ N F G + L L L+ N + L +LE L
Sbjct: 53 QLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS 111
Query: 159 GASGEIP--STFAKLHNMQILRASDAHFTGKIPDFI-GNWTKLTALRLQGNSFQGPIPS- 214
++ S F L N+ L S H + I + L L++ GNSFQ
Sbjct: 112 NLK-QMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPD 169
Query: 215 SLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLD 274
++L +L L +S L+ L + + L +LQ L+
Sbjct: 170 IFTELRNLTFLDLSQ-----------CQLEQLSPTAFNS-------------LSSLQVLN 205
Query: 275 LSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPTQK----SENLQNIDLSYNHLS-- 327
+S NN + + ++SL L N + T Q+ +L ++L+ N +
Sbjct: 206 MSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFACT 263
Query: 328 ---GPFPSWVTSSLQMNLAVNNFT 348
F W+ Q+ + V
Sbjct: 264 CEHQSFLQWIKDQRQLLVEVERME 287
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 26/207 (12%)
Query: 171 LHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGN--SFQGPIPSSLSKLASLESLRIS 228
L + ++ F T+LT L L N SF+G S SL+ L +S
Sbjct: 35 LESNKLQSLPHGVFD--------KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86
Query: 229 DIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRT 287
++ S +F + L+ L+ L +++ + + L+NL LD+S +
Sbjct: 87 FNGVITMSSNF-LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNG 144
Query: 288 LF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLS----GPFPSWVTSSLQ 339
+F + SL L + NS + NL +DLS L F S SSLQ
Sbjct: 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL--SSLQ 202
Query: 340 M-NLAVNNFTFDGSNISVFPGLQCLQR 365
+ N++ NNF + + L LQ
Sbjct: 203 VLNMSHNNFFSLDTF--PYKCLNSLQV 227
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 6e-23
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 46/283 (16%)
Query: 52 CHITKLRVYALNKKG--VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAH 109
C I + LN+ +P+ L +T L+I +N LP +L L
Sbjct: 56 CLINQFSELQLNRLNLSSLPDNL--PPQITVLEITQNALI-SLPELPASLEYLDAC---D 109
Query: 110 NVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFA 169
N S +P +LK L++ NN + LP L E + D+ ++
Sbjct: 110 NRLST-LPELPASLKHLDV---DNNQLT-MLPELPALL---EYINADNN----QLTMLPE 157
Query: 170 KLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD 229
++++L + T +P+ + L AL + N + +P+ + E I
Sbjct: 158 LPTSLEVLSVRNNQLT-FLPELPES---LEALDVSTNLLES-LPAVPVRNHHSEETEIF- 211
Query: 230 IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289
R IT IP I L T+ L N L+ +I +L
Sbjct: 212 -------------------FRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251
Query: 290 NIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPS 332
+ S + Q + + D S
Sbjct: 252 QQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQS 294
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 97.3 bits (242), Expect = 5e-21
Identities = 51/298 (17%), Positives = 92/298 (30%), Gaps = 44/298 (14%)
Query: 92 LPSFIGNLSRLTLLSLAHN-VFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150
S + L N S + EL L N +LP + ++
Sbjct: 29 YFSAWDKWEKQALPGENRNEAVSLLKECLINQFSELQL----NRLNLSSLPDNLPP--QI 82
Query: 151 EELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
L I +P A L + L A D + +P+ + L L + N
Sbjct: 83 TVLEITQNALI-SLPELPASL---EYLDACDNRLS-TLPELPAS---LKHLDVDNNQLTM 134
Query: 211 PIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQ 268
+P + LE + + + + +L+ LS+RN +T +P +
Sbjct: 135 -LPELPA---LLEYINADNNQLTMLPELP------TSLEVLSVRNNQLT-FLPE---LPE 180
Query: 269 NLQTLDLSFNNLTGQIPRTLFNIDSL----NYLFLGNNSLSGTLPTQ--KSENLQNIDLS 322
+L+ LD+S N L +P + N ++ +P + I L
Sbjct: 181 SLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238
Query: 323 YNHLSGPFPSWVT-----SSLQMNLAVNNFTFDGSNISVFPGLQCLQRNFPCNRNAPR 375
N LS ++ + + N P + FP N+ +
Sbjct: 239 DNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDV 296
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-22
Identities = 72/317 (22%), Positives = 112/317 (35%), Gaps = 53/317 (16%)
Query: 21 GSALNATDSAFESPDNNPA-----IVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTL 75
S + + E P+ P C C C L +P++L
Sbjct: 3 ASGIGPEEHFPEVPEIEPMGPVCPFRCQC-HLRVVQCSDLGLEK--------VPKDL--P 51
Query: 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNN 135
L + N T NL L L L +N S P L +L L L+ N
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 136 FSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNW 195
LP ++ L+EL + + S F L+ M ++ N
Sbjct: 112 LK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT------------N- 155
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRN 253
L + ++ +FQG + L +RI+D I + L +L +L L
Sbjct: 156 -PLKSSGIENGAFQG--------MKKLSYIRIADTNITTIPQGL-----PPSLTELHLDG 201
Query: 254 ALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT-- 310
IT + + L NL L LSFN+++ +L N L L L NN L +P
Sbjct: 202 NKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259
Query: 311 QKSENLQNIDLSYNHLS 327
+ +Q + L N++S
Sbjct: 260 ADHKYIQVVYLHNNNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 8e-18
Identities = 52/269 (19%), Positives = 95/269 (35%), Gaps = 43/269 (15%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
+ L+ L L + N + P L +L L L+ N +P ++ K L
Sbjct: 69 DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQE 125
Query: 129 LSLANNNFSGALPPEI-GNLAKLEELYIDS-CGASGEIPS-TFAKLHNMQILRASDAHFT 185
L + N + + + L ++ + + + S I + F + + +R +D + T
Sbjct: 126 LRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD---------------- 229
IP G LT L L GN +SL L +L L +S
Sbjct: 185 -TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 241
Query: 230 ---IYFVSSSLDFV----MSLKNLKDLSLRNALITGTIPSG-------IGELQNLQTLDL 275
++ ++ L V K ++ + L N I+ I S + + + L
Sbjct: 242 LRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSL 300
Query: 276 SFNNLT-GQIPRTLF-NIDSLNYLFLGNN 302
N + +I + F + + LGN
Sbjct: 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
+ L L+N IT L+NL TL L N ++ P + L L+L N
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 304 LSGTLPTQKSENLQNIDLSYNHLS----GPFPSWVTSSLQM-NLAVNNFTFDGSNISVFP 358
L LP + + LQ + + N ++ F + + + L N G F
Sbjct: 112 LK-ELPEKMPKTLQELRVHENEITKVRKSVFNG--LNQMIVVELGTNPLKSSGIENGAFQ 168
Query: 359 GLQCLQ 364
G++ L
Sbjct: 169 GMKKLS 174
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 3e-22
Identities = 61/309 (19%), Positives = 110/309 (35%), Gaps = 47/309 (15%)
Query: 51 TCHITKLRVYALNKKG--VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
+C +V ++G +P+ + +L + N +L L +L L
Sbjct: 51 SCSNQFSKVV-CTRRGLSEVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLG 107
Query: 109 HNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS- 166
N L LN L L +N + +P L+KL EL++ + IPS
Sbjct: 108 RNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSY 165
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226
F ++ ++ L +G KL + +F+G L +L+ L
Sbjct: 166 AFNRVPSLMRLD-------------LGELKKLE--YISEGAFEG--------LFNLKYLN 202
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSG-IGELQNLQTLDLSFNNLTGQIP 285
+ + + L L++L + I G L +L+ L + + ++ I
Sbjct: 203 LGMCNI--KDMPNLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVS-LIE 258
Query: 286 RTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLS-----GPFPSWVTS 336
R F + SL L L +N+LS +LP L + L +N + W+
Sbjct: 259 RNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLRE 317
Query: 337 SLQMNLAVN 345
+ N
Sbjct: 318 YIPTNSTCC 326
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 5e-22
Identities = 59/273 (21%), Positives = 91/273 (33%), Gaps = 49/273 (17%)
Query: 41 VCDCTFDNGAT--CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGN 98
C C + T C L+ +P + + + N + +
Sbjct: 5 ACVCYNEPKVTTSCPQQGLQA--------VPVGI--PAASQRIFLHGNRISHVPAASFRA 54
Query: 99 LSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDS 157
LT+L L NV + L L L L++N ++ P L +L L++D
Sbjct: 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114
Query: 158 CGASGEIPS-TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPS-S 215
CG E+ F L L L LQ N+ Q +P +
Sbjct: 115 CGLQ-ELGPGLFRGL------------------------AALQYLYLQDNALQA-LPDDT 148
Query: 216 LSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQT 272
L +L L + I V F L +L L L + + +L L T
Sbjct: 149 FRDLGNLTHLFLHGNRISSVPERA-FR-GLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMT 205
Query: 273 LDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSL 304
L L NNL+ +P + +L YL L +N
Sbjct: 206 LYLFANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 245 NLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
+ + L I+ +P+ +NL L L N L + L L L +N+
Sbjct: 33 ASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 304 LSGTLPT---QKSENLQNIDLSYNHLS 327
++ L + L L
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQ 118
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 30/136 (22%), Positives = 44/136 (32%), Gaps = 2/136 (1%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
L L L +DR P L+ L L L N +L L L L N
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163
Query: 135 NFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG 193
S ++P L L+ L + + P F L + L + + + +
Sbjct: 164 RIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA 222
Query: 194 NWTKLTALRLQGNSFQ 209
L LRL N +
Sbjct: 223 PLRALQYLRLNDNPWV 238
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 8e-22
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 42/283 (14%)
Query: 51 TCHITKLRVYALNKKG--VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
+C +V +K +P+ + T L + N + +L L +L L+
Sbjct: 40 SCSNQFSKVI-CVRKNLREVPDGIST--NTRLLNLHENQIQIIKVNSFKHLRHLEILQLS 96
Query: 109 HNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS- 166
N L LN L L +N + +P L+KL+EL++ + IPS
Sbjct: 97 RNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSY 154
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLR 226
F ++ +++ L +G +L+ + +F+G L++L L
Sbjct: 155 AFNRIPSLRRLD-------------LGELKRLS--YISEGAFEG--------LSNLRYLN 191
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIP 285
++ + + L L +L L ++ I G L +LQ L + + + I
Sbjct: 192 LAMCNL--REIPNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQ-VIE 247
Query: 286 RTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYN 324
R F N+ SL + L +N+L+ LP +L+ I L +N
Sbjct: 248 RNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 2e-17
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 17/212 (8%)
Query: 125 ELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHF 184
LL+L N +L LE L + F L N+ L D
Sbjct: 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124
Query: 185 TGKIPD--FIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD---IYFVSSSLDF 239
T IP+ F+ +KL L L+ N + + +++ SL L + + + ++S F
Sbjct: 125 T-TIPNGAFVYL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGA-F 181
Query: 240 VMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLF 298
L NL+ L+L + IP+ L L LDLS N+L+ I F + L L+
Sbjct: 182 E-GLSNLRYLNLAMCNLR-EIPNLTP-LIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLW 237
Query: 299 LGNNSLSGTLPT---QKSENLQNIDLSYNHLS 327
+ + + + ++L I+L++N+L+
Sbjct: 238 MIQSQIQ-VIERNAFDNLQSLVEINLAHNNLT 268
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 1e-13
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 173 NMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--I 230
N ++L + + + L L+L N + + + LA+L +L + D +
Sbjct: 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124
Query: 231 YFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF 289
+ + FV L LK+L LRN I +IPS + +L+ LDL I F
Sbjct: 125 TTIPNGA-FV-YLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAF 181
Query: 290 -NIDSLNYLFLGNNSLSGTLPT-QKSENLQNIDLSYNHLS----GPFPSWVTSSLQ-MNL 342
+ +L YL L +L +P L +DLS NHLS G F LQ + +
Sbjct: 182 EGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGL--MHLQKLWM 238
Query: 343 AVNNFTFDGSNISVFPGLQCLQR 365
+ N F LQ L
Sbjct: 239 IQSQIQVIERN--AFDNLQSLVE 259
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYID 156
LS L L+LA +P L L +L+ L L+ N+ S A+ P L L++L++
Sbjct: 183 GLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMI 239
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209
+ F L ++ + + + T D L + L N +
Sbjct: 240 QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 1e-21
Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 12/240 (5%)
Query: 72 LVTLQYLTF--LKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
T+ Y + +K+ +L L++ + +VF P +N+
Sbjct: 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIK 305
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
+ + ++ L + + + L ++ L ++
Sbjct: 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELS 364
Query: 190 DFIG---NWTKLTALRLQGNSFQ-GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKN 245
L L + NS S SL SL +S + F
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL--TDTIFRCLPPR 422
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSL 304
+K L L + I +IP + +L+ LQ L+++ N L +P +F + SL ++L N
Sbjct: 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 7e-17
Identities = 58/325 (17%), Positives = 100/325 (30%), Gaps = 52/325 (16%)
Query: 75 LQYLTFLKIDRNFFTG-PLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKE-------- 125
L L + N F P+ GN+S+L L L+ + +L
Sbjct: 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLG 148
Query: 126 -------------------LNLLSLANNNFSGALPPEIGNLAKLE------ELYIDSCGA 160
L+++ N F L + +A LE L + C
Sbjct: 149 ETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208
Query: 161 SGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGN---WTKLTALRLQGNSFQGPIPSSLS 217
I + + L ++ T I T + + QG +
Sbjct: 209 FLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDF 268
Query: 218 KLA--SLESLRISDIYF--VSSSLDFVM-SLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
+ SL++L I + ++ N+ + + ++
Sbjct: 269 DYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLH 328
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKS-----ENLQNIDLSYNHLS 327
LD S N LT + ++ L L L N L L ++LQ +D+S N +S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVS 387
Query: 328 GPFP----SWVTSSLQMNLAVNNFT 348
SW S L +N++ N T
Sbjct: 388 YDEKKGDCSWTKSLLSLNMSSNILT 412
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 3e-16
Identities = 51/299 (17%), Positives = 97/299 (32%), Gaps = 23/299 (7%)
Query: 62 LNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELG 121
L + E+ LQ + F T FI ++S T+ +L + +
Sbjct: 147 LGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKC 206
Query: 122 NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASD 181
+ L L N L + I + S+
Sbjct: 207 SYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRI----------LQLVWHTTVWYFSISN 256
Query: 182 AHFTGKIP--DFIGNWTKLTAL---RLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSS 236
G++ DF + T L AL ++ + F P +++ +
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 237 LDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID---S 293
+ + L N L+T T+ G L L+TL L N L ++ + S
Sbjct: 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKS 375
Query: 294 LNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLSGPFPSWVTSSLQM-NLAVNNFT 348
L L + NS+S +++L ++++S N L+ + +++ +L N
Sbjct: 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 61/320 (19%), Positives = 118/320 (36%), Gaps = 28/320 (8%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
++++L L L I N S L L L+HN NLK L+
Sbjct: 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLKHLD- 96
Query: 129 LSLANNNF-SGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L+ N F + + E GN+++L+ L + + A L+ ++L + K
Sbjct: 97 --LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEK 154
Query: 188 I-PDFIGNW--TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDI------YFVSSSLD 238
P+ + ++ L + F + S+ +A+LE I + + S L
Sbjct: 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA 214
Query: 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQ---NLQTLDLSFNNLTGQIPRTLF-----N 290
+ + L +L+L N T I +L + +S L GQ+ F +
Sbjct: 215 KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTS 274
Query: 291 IDSLNYLFLGNNSL----SGTLPTQKSENLQNIDLSYNH-LSGPFPSWVTSSLQMNLAVN 345
+ +L+ + ++ S + N++N +S + PS ++ L ++ + N
Sbjct: 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 346 NFTFDGSNISVFPGLQCLQR 365
T + L L+
Sbjct: 335 LLT--DTVFENCGHLTELET 352
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 8e-12
Identities = 49/250 (19%), Positives = 85/250 (34%), Gaps = 23/250 (9%)
Query: 116 VPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQ 175
VP++L ++ +L+++ N S +I +L+KL L I S F ++
Sbjct: 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 176 ILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISDIYFVS 234
L S KI L L L N+F PI ++ L+ L +S +
Sbjct: 73 YLDLSHNKLV-KIS--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129
Query: 235 SSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSL 294
SS+ + L K L + LQ+ T L T + + ++
Sbjct: 130 SSVLPIAHLNISKVLLVLGETYGEKED--PEGLQDFNTESLHIVFPTNKEFHFILDVSVK 187
Query: 295 NYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNI 354
L L NI + + + LQ N ++N T +
Sbjct: 188 TVANL---------------ELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232
Query: 355 SVFPGLQCLQ 364
+ ++ LQ
Sbjct: 233 TWNSFIRILQ 242
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 18/181 (9%)
Query: 212 IPSSLSKLASLESLRISDIYFVS-SSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQN 269
+P LS L IS Y + D + SL L+ L + + I + + Q
Sbjct: 15 VPKDLS--QKTTILNISQNYISELWTSDIL-SLSKLRILIISHNRIQ-YLDISVFKFNQE 70
Query: 270 LQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT----QKSENLQNIDLSYNH 325
L+ LDLS N L N L +L L N+ LP L+ + LS H
Sbjct: 71 LEYLDLSHNKLVKISCHPTVN---LKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTH 126
Query: 326 L-SGPFPSWV-TSSLQMNLAVNNFTFDGSNISVFPGL--QCLQRNFPCNRNAPRYANFSI 381
L + ++ L + + + + L FP N+ + S+
Sbjct: 127 LEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 382 K 382
K
Sbjct: 187 K 187
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 28/136 (20%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN 133
++ L L I +N + L L+++ N+ + + R L + +L L +
Sbjct: 373 MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHS 430
Query: 134 NNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG 193
N ++P ++ L L+EL + + Q+ D F
Sbjct: 431 NKIK-SIPKQVVKLEALQELN----------------VASNQLKSVPDGIF--------D 465
Query: 194 NWTKLTALRLQGNSFQ 209
T L + L N +
Sbjct: 466 RLTSLQKIWLHTNPWD 481
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 4e-21
Identities = 57/313 (18%), Positives = 102/313 (32%), Gaps = 53/313 (16%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+P+E+ T L + N + L L L L +N S + L++L
Sbjct: 48 VPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 128 LLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L ++ N+ +PP + + L EL +H+ +I + F+G
Sbjct: 106 KLYISKNHLV-EIPPNL--PSSLVELR----------------IHDNRIRKVPKGVFSGL 146
Query: 188 IPDFIGNWTKLTALRLQGNSFQ-GPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLK 244
+ + + GN + L LRIS+ + + L +
Sbjct: 147 --------RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDL-----PE 193
Query: 245 NLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
L +L L + I I L L L N + I + +L L L NN
Sbjct: 194 TLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLDNN 251
Query: 303 SLSGTLPT--QKSENLQNIDLSYNHLS--------GPFPSWVTSSLQ-MNLAVNNFTFDG 351
LS +P + LQ + L N+++ + ++L N +
Sbjct: 252 KLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWE 310
Query: 352 SNISVFPGLQCLQ 364
+ F +
Sbjct: 311 VQPATFRCVTDRL 323
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 4e-16
Identities = 52/271 (19%), Positives = 90/271 (33%), Gaps = 48/271 (17%)
Query: 69 PEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
++ LQ+L L + N + L +L L ++ N +P L L
Sbjct: 71 KDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNL--PSSLVE 127
Query: 129 LSLANNNFSGALPPEI-GNLAKLEELYIDS--CGASGEIPSTFAKLHNMQILRASDAHFT 185
L + +N +P + L + + + SG P F L + LR S+A T
Sbjct: 128 LRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSL 243
IP L L L N Q L + + L L + I + + L
Sbjct: 186 -GIPK--DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS-L-SFL 240
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLD----------------------------- 274
L++L L N ++ +P+G+ +L+ LQ +
Sbjct: 241 PTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGI 299
Query: 275 -LSFNNLT-GQIPRTLF-NIDSLNYLFLGNN 302
L N + ++ F + + GN
Sbjct: 300 SLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 8e-21
Identities = 45/260 (17%), Positives = 94/260 (36%), Gaps = 23/260 (8%)
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
L+ ++ + + V +L + LS + + L L L +
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLS 217
+ ++ L + L S + + L L P L+
Sbjct: 73 NQIT-DLAP-LKNLTKITELELSGNPLK-NVSAI-AGLQSIKTLDLTSTQITDVTP--LA 126
Query: 218 KLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL 275
L++L+ L + I +++ + L NL+ LS+ NA ++ + + L L TL
Sbjct: 127 GLSNLQVLYLDLNQI----TNISPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKA 180
Query: 276 SFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT 335
N ++ I L ++ +L + L NN +S P + NL + L+ ++ +
Sbjct: 181 DDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYNN 238
Query: 336 SSLQMNLAVNNFTFDGSNIS 355
+ + N+ G+ I+
Sbjct: 239 NLVVPNVVKGP---SGAPIA 255
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 14/208 (6%)
Query: 120 LGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRA 179
L ++ +N + +L + L G + I L+N+ L
Sbjct: 15 DPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLEL 70
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDF 239
D T + N TK+T L L GN + S+++ L S+++L ++ + +
Sbjct: 71 KDNQIT-DLAPL-KNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQI--TDVTP 124
Query: 240 VMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFL 299
+ L NL+ L L IT S + L NLQ L + ++ P L N+ L L
Sbjct: 125 LAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180
Query: 300 GNNSLSGTLPTQKSENLQNIDLSYNHLS 327
+N +S P NL + L N +S
Sbjct: 181 DDNKISDISPLASLPNLIEVHLKNNQIS 208
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 5e-18
Identities = 56/286 (19%), Positives = 104/286 (36%), Gaps = 46/286 (16%)
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
E + L L L++ N T + + NL+++T L L+ N + L+ + L
Sbjct: 57 EGVQYLNNLIGLELKDNQITDL--APLKNLTKITELELSGNPLKNVSA--IAGLQSIKTL 112
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
L + + + L+ L+ LY+D ++ N+
Sbjct: 113 DLTSTQITD--VTPLAGLSNLQVLYLDLN-----------QITNI--------------- 144
Query: 190 DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLK 247
+ T L L + + L+ L+ L +L+ D I S + + SL NL
Sbjct: 145 SPLAGLTNLQYLSIGNAQVSD--LTPLANLSKLTTLKADDNKI----SDISPLASLPNLI 198
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
++ L+N I+ S + NL + L+ +T Q N+ N + S +
Sbjct: 199 EVHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNV--VKGPSGAPI 254
Query: 308 LPTQKSEN--LQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDG 351
P S+N + +L++N S T + + F G
Sbjct: 255 APATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSG 300
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 7/105 (6%)
Query: 262 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDL 321
L N + +N+T T ++D + L ++ Q NL ++L
Sbjct: 13 FPDPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLEL 70
Query: 322 SYNHLSGPFPSWVTSSLQM-NLAVNNFTFDGSNISVFPGLQCLQR 365
N ++ P + + L+ N N+S GLQ ++
Sbjct: 71 KDNQITDLAPLKNLTKITELELSGNPLK----NVSAIAGLQSIKT 111
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 95.2 bits (236), Expect = 2e-20
Identities = 45/286 (15%), Positives = 95/286 (33%), Gaps = 26/286 (9%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN---VFSGPVPRELGNLKELNLLSL 131
+ + T L+ + + ++ G + L + L L
Sbjct: 20 FAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSVQG-----IQYLPNVTKLFL 72
Query: 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDF 191
N + P + NL L L++D ++ S+ L ++ L + I +
Sbjct: 73 NGNKLTDIKP--LTNLKNLGWLFLDENKIK-DL-SSLKDLKKLKSLSLEHNGIS-DI-NG 126
Query: 192 IGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDL 249
+ + +L +L L N + + LS+L L++L + D I S + + L L++L
Sbjct: 127 LVHLPQLESLYLGNN--KITDITVLSRLTKLDTLSLEDNQI----SDIVPLAGLTKLQNL 180
Query: 250 SLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP 309
L I+ + L+NL L+L + N+ N + + SL
Sbjct: 181 YLSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEI 238
Query: 310 TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNIS 355
+ + ++ ++ + + F G
Sbjct: 239 ISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQ 284
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 3e-08
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 23/145 (15%)
Query: 222 LESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLT 281
S I I+ + +L+ +T + EL ++ + + +++
Sbjct: 6 TVSTPIKQIFPDDA-------FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 282 GQIPRTLFNID---SLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSL 338
++ I ++ LFL N L+ P +NL + L N + SSL
Sbjct: 57 -----SVQGIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIK------DLSSL 105
Query: 339 QMNLAVNNFTFDGSNISVFPGLQCL 363
+ + + + + + IS GL L
Sbjct: 106 KDLKKLKSLSLEHNGISDINGLVHL 130
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 5e-20
Identities = 61/301 (20%), Positives = 102/301 (33%), Gaps = 29/301 (9%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLS 100
C D C + + + IP L + L + N T S +
Sbjct: 27 SLSC--DRNGICKGSSGSLNS------IPSGLTE--AVKSLDLSNNRITYISNSDLQRCV 76
Query: 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCG 159
L L L N + +L L L L+ N S L L+ L L +
Sbjct: 77 NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNP 135
Query: 160 ASGEIP--STFAKLHNMQILRASDAHFTGKIPDFI-GNWTKLTALRLQGNSFQGPIPSSL 216
+ S F+ L +QILR + KI T L L + + Q P SL
Sbjct: 136 YK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL 194
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGT----IPSGI----GELQ 268
+ ++ L + + FV +++ L LR+ + + +G +
Sbjct: 195 KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKF 254
Query: 269 NLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNH 325
+ + ++ +L Q+ + L I L L N L ++P + +LQ I L N
Sbjct: 255 TFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNP 312
Query: 326 L 326
Sbjct: 313 W 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 44/250 (17%)
Query: 125 ELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDA 182
+ L L+NN + + L+ L + S G + I +F+ L +
Sbjct: 53 AVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGS--------- 101
Query: 183 HFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL-SKLASLESLRISDIYFVS-SSLDFV 240
L L L N + SS L+SL L + + +
Sbjct: 102 ---------------LEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLF 145
Query: 241 MSLKNLKDLSL-RNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYL 297
L L+ L + T I L L+ L++ ++L +I ++++L
Sbjct: 146 SHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHL 203
Query: 298 FLGNNSLSGTLPT---QKSENLQNIDLSYNHLSGP----FPSWVTSSLQMNLAVNNFTFD 350
L L + +++ ++L L + T+SL N
Sbjct: 204 ILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKIT 262
Query: 351 GSNISVFPGL 360
++ L
Sbjct: 263 DESLFQVMKL 272
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 44/209 (21%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN 133
L L L++ + L+ L L + + P+ L +++ ++ L L
Sbjct: 148 LTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHM 207
Query: 134 NNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG 193
L +++ L D
Sbjct: 208 KQHI-LLLEIF-----------------------VDVTSSVECLELRDTDLDT------- 236
Query: 194 NWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRN 253
+ +SL K + +++I+D + L +L
Sbjct: 237 ---------FHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLL-NQISGLLELEFSR 286
Query: 254 ALITGTIPSGI-GELQNLQTLDLSFNNLT 281
+ ++P GI L +LQ + L N
Sbjct: 287 NQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 46/257 (17%), Positives = 82/257 (31%), Gaps = 26/257 (10%)
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130
+L LT+L D N T L + L++LT L+ N + ++ L L+
Sbjct: 80 DLSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLN 133
Query: 131 LANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPD 190
A N + ++ + +L EL ++ + L S T ++
Sbjct: 134 CARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT-ELD- 186
Query: 191 FIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLS 250
+ L L N+ L++ L L S + +D L L
Sbjct: 187 -VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL--TEIDVT-PLTQLTYFD 239
Query: 251 LRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
+T + + L L TL +L +I L + L Y L
Sbjct: 240 CSVNPLT-ELD--VSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQAEGCRKIKELDV 293
Query: 311 QKSENLQNIDLSYNHLS 327
+ L +D ++
Sbjct: 294 THNTQLYLLDCQAAGIT 310
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 4e-18
Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 25/267 (9%)
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
N + + +L L L+ N++ + I L L +L S
Sbjct: 19 NFASEVAAAFEMQATDTISEEQLATLTSLD---CHNSSITDM--TGIEKLTGLTKLICTS 73
Query: 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLS 217
+ + ++ N+ L T + + TKLT L N +S
Sbjct: 74 NNIT-TLD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVS 124
Query: 218 KLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSF 277
+ L L + + +D L +L + + L TLD SF
Sbjct: 125 QNPLLTYLNCARNTL--TEIDVS-HNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSF 179
Query: 278 NNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSS 337
N +T ++ + LN L N+++ L ++ L +D S N L+ + +T
Sbjct: 180 NKIT-ELD--VSQNKLLNRLNCDTNNIT-KLDLNQNIQLTFLDCSSNKLTEIDVTPLTQL 235
Query: 338 LQMNLAVNNFTFDGSNISVFPGLQCLQ 364
+ +VN T ++S L L
Sbjct: 236 TYFDCSVNPLT--ELDVSTLSKLTTLH 260
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 2e-16
Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 24/282 (8%)
Query: 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLS 130
++ + L L D N T L + +LT L + N + ++ L +L
Sbjct: 186 DVSQNKLLNRLNCDTNNITK-LD--LNQNIQLTFLDCSSNKLTEI---DVTPLTQLTYFD 239
Query: 131 LANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPD 190
+ N + L + L+KL L+ EI + +A ++
Sbjct: 240 CSVNPLT-ELD--VSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQAEGCRKIKELD- 292
Query: 191 FIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLS 250
+ + T+L L Q LS+ L L +++ + LD LK LS
Sbjct: 293 -VTHNTQLYLLDCQAAGIT---ELDLSQNPKLVYLYLNNTEL--TELDVS-HNTKLKSLS 345
Query: 251 LRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN-SLSGTLP 309
NA I S +G++ L + +P+ +SL + G
Sbjct: 346 CVNAHIQ-DFSS-VGKIPALNNNFEAEGQTI-TMPKETLTNNSLTIAVSPDLLDQFGNPM 402
Query: 310 TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDG 351
+ + D + N ++ S ++ N G
Sbjct: 403 NIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVG 444
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 14/180 (7%)
Query: 148 AKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNS 207
+ + +L + L ++ T + I T LT L N+
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLICTSNN 75
Query: 208 FQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGEL 267
+ LS+ +L L ++LD L L L+ +T + + +
Sbjct: 76 ITT-LD--LSQNTNLTYLACDSNKL--TNLDVT-PLTKLTYLNCDTNKLT-KLD--VSQN 126
Query: 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
L L+ + N LT +I + + L L N L L +D S+N ++
Sbjct: 127 PLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKIT 183
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-19
Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 8/183 (4%)
Query: 146 NLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQG 205
+ G S T A+++++ + ++ + T + I + L +
Sbjct: 21 TFKAYLNGLL---GQSSTANITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINN 75
Query: 206 NSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIG 265
+ +S L++LE LRI S + + L +L L + ++ +I + I
Sbjct: 76 IHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 266 ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNH 325
L + ++DLS+N I L + L L + + + + L +
Sbjct: 134 TLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQT 192
Query: 326 LSG 328
+ G
Sbjct: 193 IGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 4e-17
Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 31/187 (16%)
Query: 96 IGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYI 155
++ LT ++LA+ + + + L++ N + + P I L+ LE L I
Sbjct: 40 EAQMNSLTYITLANINVTDLTG--IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRI 95
Query: 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS 215
+ + + L ++ +L S + I I K+ ++ L N
Sbjct: 96 MGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG-------- 147
Query: 216 LSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL 275
I+DI L +L LK L+++ + GI + L L
Sbjct: 148 ----------AITDI----MPLK---TLPELKSLNIQFDGVHDY--RGIEDFPKLNQLYA 188
Query: 276 SFNNLTG 282
+ G
Sbjct: 189 FSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 3e-13
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 9/139 (6%)
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLL 129
+ + L I+ T + I LS L L + + L L L LL
Sbjct: 60 TGIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117
Query: 130 SLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
++++ ++ +I L K+ + + GA +I L ++ L +
Sbjct: 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFD----GVH 172
Query: 190 DF--IGNWTKLTALRLQGN 206
D+ I ++ KL L
Sbjct: 173 DYRGIEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 55 TKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSG 114
+LR+ + L L LT L I + + + I L ++ + L++N
Sbjct: 91 ERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT 150
Query: 115 PVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
L L EL L++ + I + KL +LY S
Sbjct: 151 -DIMPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFS 190
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 17/129 (13%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID---SLNYLF 298
+ K + L + + ++ +L + L+ N+T L I+ ++ L
Sbjct: 21 TFKAYLNGLLGQSSTANITEA---QMNSLTYITLANINVT-----DLTGIEYAHNIKDLT 72
Query: 299 LGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAVNNFTFDG-SNI 354
+ N + P NL+ + + ++ ++ +SL + +++ + + I
Sbjct: 73 INNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 355 SVFPGLQCL 363
+ P + +
Sbjct: 133 NTLPKVNSI 141
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 6e-19
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 12/104 (11%)
Query: 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIAT 692
L + G +G V+K L +AVK I Q Q E+ +
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSW-QNEYEVYS 71
Query: 693 ISAVQHRNLVRLYGCCIEG----ARRLLVYDGYLAPEYAMRGHL 732
+ ++H N+++ G G L+ + +G L
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLIT------AFHEKGSL 109
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 4e-17
Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 12/116 (10%)
Query: 720 GYLAPEYAMRGHL-----TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLH 774
Y+APE + D+++ G+V E+ S +D +D + E
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257
Query: 775 ENNQSLGLV-----DPTLTE-FNDKEALRVIG-VALLCTQASPMMRPPMSRVVAML 823
+V P L + + + ++ C R V +
Sbjct: 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 8e-19
Identities = 57/288 (19%), Positives = 107/288 (37%), Gaps = 40/288 (13%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVF-SGPVPREL-GNLKELNLLSL 131
L L LK+D N F L + L+ L +L+L + L L +L L
Sbjct: 78 LSSLIILKLDYNQFLQ-LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVL 136
Query: 132 ANNNFSGALPPEI--GNLAKLEELYID----SCGASGEIPS------TFAKLHNMQILRA 179
+NN + P N+ + L + ++ + T +L ++ +
Sbjct: 137 RDNNIK-KIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDM 195
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLAS---LESLRISDIYFVSSS 236
++ + T +T L L GN F+ + + ++SL +S+ Y + SS
Sbjct: 196 NEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS 255
Query: 237 LDF------------VMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQ 283
+ +K L + I + + +L+ L L+ N + +
Sbjct: 256 FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN-K 313
Query: 284 IPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLS 327
I F + L L L N L ++ + + + L+ +DLSYNH+
Sbjct: 314 IDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR 360
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 2e-16
Identities = 51/284 (17%), Positives = 88/284 (30%), Gaps = 40/284 (14%)
Query: 75 LQYLTFLKIDRNFFT--GPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRELG--N 122
L L L + N P F N+ R +L L N +
Sbjct: 128 LTSLEMLVLRDNNIKKIQPASFF-LNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR 186
Query: 123 LKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTF-AKLHNMQILRASD 181
L + L + + L + G + F + +I
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 182 AHFTGKIPDFIGN--------------WTKLTALRLQGNSFQGPIPSSLSKLASLESLRI 227
++ F + + L + + S S LE L +
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306
Query: 228 SD--IYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQI 284
+ I + + F L +L L+L + +I S + L L+ LDLS+N++ +
Sbjct: 307 AQNEINKIDDNA-FW-GLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-AL 362
Query: 285 PRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYN 324
F + +L L L N L ++P + +LQ I L N
Sbjct: 363 GDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 45/279 (16%), Positives = 82/279 (29%), Gaps = 44/279 (15%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL-GNLKELNLLSLANNNF 136
+ ++ + N + L L L + + L L +L L N F
Sbjct: 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91
Query: 137 SGALPPEI-GNLAKLEELYIDSCG-ASGEIPS-TFAKLHNMQILRASDAHFTGKIPDFIG 193
L LA LE L + C + F L
Sbjct: 92 L-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL---------------------- 128
Query: 194 NWTKLTALRLQGNSFQGPIPSSL-SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLR 252
T L L L+ N+ + P+S + L ++ S + +++ + LR
Sbjct: 129 --TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR 186
Query: 253 NALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK 312
L ++ D++ L + F S+ L L N ++ +
Sbjct: 187 --------------LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232
Query: 313 SENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDG 351
+ + + LS + + +NFTF G
Sbjct: 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKG 271
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 7e-12
Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 31/230 (13%)
Query: 98 NLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
LS +TL + + L L+ N F ++ + ++
Sbjct: 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245
Query: 158 CGASGEIPS-------------TFAKLH--NMQILRASDAHFTGKIPDFI-GNWTKLTAL 201
S + S TF L ++ S + + + ++T L L
Sbjct: 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQL 304
Query: 202 RLQGNSFQGPIPSSLSKLASLESL-----RISDIYFVSSSLDFVMSLKNLKDLSLRNALI 256
L N ++ L L L + I S + +L L+ L L I
Sbjct: 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSID--SRMFE---NLDKLEVLDLSYNHI 359
Query: 257 TGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSL 304
+ L NL+ L L N L +P +F + SL ++L N
Sbjct: 360 R-ALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 24/144 (16%)
Query: 78 LTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHN--------VFSGPVPRELGNLKELNL 128
+ + ++ L + + + L L+LA N F G L +L +LNL
Sbjct: 277 VKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG-----LTHLLKLNL 330
Query: 129 LSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDAHFTG 186
+ NF G++ + NL KLE L + + +F L N++ L
Sbjct: 331 ----SQNFLGSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK- 384
Query: 187 KIPDFI-GNWTKLTALRLQGNSFQ 209
+PD I T L + L N +
Sbjct: 385 SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 7e-18
Identities = 54/318 (16%), Positives = 96/318 (30%), Gaps = 45/318 (14%)
Query: 38 PAIVCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIG 97
+C C+ + C +K+ IP +L + L+
Sbjct: 3 HHRICHCS-NRVFLCQESKVTE--------IPSDL--PRNAIELRFVLTKLRVIQKGAFS 51
Query: 98 NLSRLTLLSLAHNVFSGPVPRE-LGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYI 155
L + ++ N + + NL +L+ + + N + PE NL L+ L I
Sbjct: 52 GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLI 111
Query: 156 DSCGASGEIPS-TFAKLHNMQILRASDAHFTGKIPD--FIGNWTKLTALRLQGNSFQGPI 212
+ G +P +L D I F+G + L L N Q I
Sbjct: 112 SNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-I 169
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
+S L+ L +SD +L+ L +
Sbjct: 170 HNSAFNGTQLDELNLSDN----------NNLEELPNDVFHG-------------ASGPVI 206
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYL-FLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFP 331
LD+S + +P ++L L +L +K L L+Y F
Sbjct: 207 LDISRTRIH-SLPSYGL--ENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFA 263
Query: 332 SWVTSSLQMNLAVNNFTF 349
+W +++ N
Sbjct: 264 NWRRQISELHPICNKSIL 281
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 8e-18
Identities = 47/239 (19%), Positives = 82/239 (34%), Gaps = 12/239 (5%)
Query: 71 ELVTLQYLTF--LKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNL 128
++YL L I L L + + + VF E+N+
Sbjct: 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNI 333
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT--G 186
L+ ++ + + L + + + L +Q L
Sbjct: 334 KMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393
Query: 187 KIPDFIGNWTKLTALRLQGNSFQ-GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSL-K 244
K+ N + L L + NS + + S+ L +S S L
Sbjct: 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR---CLPP 450
Query: 245 NLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
+K L L N I +IP + LQ LQ L+++ N L +P +F + SL Y++L +N
Sbjct: 451 KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 4e-13
Identities = 52/304 (17%), Positives = 100/304 (32%), Gaps = 21/304 (6%)
Query: 63 NKKGVIPEELVTLQYLTFLKID---RNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRE 119
+ + T+ +L F LS + L +
Sbjct: 186 GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSEL 245
Query: 120 LGNLKELNLLSLANNNFSGALPPEIGNLAK---LEELYIDSCGASGEIPSTFA-----KL 171
LN+ +L + + ++ +E L I + + I L
Sbjct: 246 TRGPTLLNV-TLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETAL 304
Query: 172 HNMQILRASDAHFTGKIPDFIGNW-TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDI 230
++ I + F + + + ++ L + +S L +
Sbjct: 305 KSLMIEHVKNQVFL-FSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363
Query: 231 YFVSSSLDFVMSLKNLKDLSLR-NALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTL 288
F S +LK L+ L L+ N L + + + +L+TLD+S N+L
Sbjct: 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRT 423
Query: 289 FNI-DSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT--SSLQM-NLAV 344
+S+ L L +N L+G++ ++ +DL N + P VT +LQ N+A
Sbjct: 424 CAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVAS 482
Query: 345 NNFT 348
N
Sbjct: 483 NQLK 486
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 5e-13
Identities = 44/240 (18%), Positives = 80/240 (33%), Gaps = 21/240 (8%)
Query: 53 HITKLRVYALNKKGVIPEELVT-----LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSL 107
+ L +Y L I E T L+ L + F + + + + L
Sbjct: 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKML 336
Query: 108 AHN---VFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEI 164
+ + P + LN N F+ ++ L +L+ L + G
Sbjct: 337 SISDTPFIHMVCPPSPSSFTFLNF---TQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NF 392
Query: 165 PSTFAKLHNMQILRASDAHFTG---KIPDFIGNW-TKLTALRLQGNSFQGPIPSSLSKLA 220
NM L D D W + L L N G + L
Sbjct: 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--P 450
Query: 221 SLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNN 279
++ L + + +S D V L+ L++L++ + + ++P G+ L +LQ + L N
Sbjct: 451 KVKVLDLHNNRIMSIPKD-VTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 5e-12
Identities = 60/337 (17%), Positives = 111/337 (32%), Gaps = 59/337 (17%)
Query: 75 LQYLTFLKIDRNFFTG-PLPSFIGNLSRLTLLSLAHNVF-SGPVPR-------------- 118
+ L L + N F P+ GNL++LT L L+ F +
Sbjct: 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLV 179
Query: 119 ------------ELGNLKELNLLSLANNNFSGALPPEIGNLAKLE----ELYIDSCGASG 162
++ N L+L+ N+ FS + + L L+ +L ++C
Sbjct: 180 SYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM 239
Query: 163 EIPSTFAKLHNMQILRASDAHFTGK--IPDFIGNW-TKLTALRLQGNSFQGPIPSSLSKL 219
S + + + T K + F W + L + + I
Sbjct: 240 TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTY 299
Query: 220 AS-------LESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
+ +E ++ F +L V + N+K LS+ + + +
Sbjct: 300 SETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPS--PSSFTF 357
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHL---- 326
L+ + N T + + + L L L N L ++N+ +++ L
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLN 416
Query: 327 SGPFP---SWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
S + +W S L +NL+ N T SVF L
Sbjct: 417 SHAYDRTCAWAESILVLNLSSNMLT-----GSVFRCL 448
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 52/308 (16%), Positives = 93/308 (30%), Gaps = 54/308 (17%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRELGNLKELNLL 129
L + +N + I LS L +L L+HN VF ++L L
Sbjct: 54 TKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFL--------FNQDLEYL 105
Query: 130 SLANNNFSGALPPEIGNLAKLEELY-----IDSCGASGEIPSTFAKLHNMQILRASDAHF 184
+++N + +A L L D E F L + L S A F
Sbjct: 106 DVSHNRLQ-NISC--CPMASLRHLDLSFNDFDVLPVCKE----FGNLTKLTFLGLSAAKF 158
Query: 185 TGKIP--DFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242
++ L L +G SL + L + S+ MS
Sbjct: 159 R-QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNSLFSVQVNMS 216
Query: 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRT----------LFNID 292
+ L L L N + + + T + N+T Q T F
Sbjct: 217 VNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPR 276
Query: 293 SLNYLFLGNNSLSGTLPTQKS-------ENLQNIDLSYNHLSGPFPSWVTSSL----QMN 341
+ YL + N +++ + ++ ++L + + S
Sbjct: 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFL-FSKEALYSVFAEMNIKM 335
Query: 342 LAVNNFTF 349
L++++ F
Sbjct: 336 LSISDTPF 343
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 23/237 (9%)
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
LSL+ N+ S P+I L++L L + F +++ L S I
Sbjct: 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NI 115
Query: 189 PDFIGNWTKLTALRLQGNSFQG-PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
L L L N F P+ L L L +S F L V L
Sbjct: 116 SC--CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSC 173
Query: 248 DLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGT 307
L + + ++ N L L F+ P +LF++ + + N+L
Sbjct: 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFH------PNSLFSVQ----VNMSVNAL--- 220
Query: 308 LPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQ 364
+LQ ++ N + S L + N T + ++ Q
Sbjct: 221 ------GHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQ 271
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-05
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 35/168 (20%)
Query: 49 GATCHITKLRVYALNKKG-----VIPEELVTLQYLTFLKIDRNFFT-GPLPSFIGNLSRL 102
+ +L+ L + G + + L L + N +
Sbjct: 371 QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430
Query: 103 TLLSLAHNVFSGPVPREL-GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGAS 161
+L+L+ N+ +G V R L +K L+L NN ++P ++ +L L+EL
Sbjct: 431 LVLNLSSNMLTGSVFRCLPPKVKVLDL---HNNRIM-SIPKDVTHLQALQELN------- 479
Query: 162 GEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209
+ + Q+ D F T L + L N +
Sbjct: 480 ---------VASNQLKSVPDGVF--------DRLTSLQYIWLHDNPWD 510
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 4e-17
Identities = 34/129 (26%), Positives = 47/129 (36%), Gaps = 18/129 (13%)
Query: 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIAT 692
+ +E + +G G YG VYKG+L D R +AVK S A+ Q I
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK-NIYR 60
Query: 693 ISAVQHRNLVRLYGCCIEG-----ARRLLVYDGYLAPEYAMRGHL-----TEKADVFSFG 742
+ ++H N+ R LLV EY G L +D S
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVM------EYYPNGSLXKYLSLHTSDWVSSC 114
Query: 743 VVALEVISG 751
+A V G
Sbjct: 115 RLAHSVTRG 123
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 5e-08
Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 19/123 (15%)
Query: 720 GYLAPEYAM-------RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN 772
Y+APE ++ D+++ G++ E+ + + Y + +
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE-YQMAFQTE 251
Query: 773 LHENNQSLGLVD--------PTLTE--FNDKEALRVIG-VALLCTQASPMMRPPMSRVVA 821
+ + + P E + A+R + C R
Sbjct: 252 VGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311
Query: 822 MLA 824
+A
Sbjct: 312 RMA 314
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 6e-17
Identities = 44/237 (18%), Positives = 74/237 (31%), Gaps = 44/237 (18%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRELGNLKELNLL 129
L + N + L +L L+ + L L+ L
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS--------LSHLSTL 81
Query: 130 SLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDAHFTG- 186
L N +L L+ L++L + + + L ++ L +
Sbjct: 82 ILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNL 246
K+P++ N T L L L N Q + L L + L +S
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS------------------ 181
Query: 247 KDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
L L + I G + L+ L L N L +P +F + SL ++L N
Sbjct: 182 --LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 42/209 (20%), Positives = 71/209 (33%), Gaps = 20/209 (9%)
Query: 129 LSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGK 187
L L+ N L + +L+ L + C + L ++ L +
Sbjct: 33 LDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90
Query: 188 IPDFI-GNWTKLTALRLQGNSFQGPIPSSL-SKLASLESLRISD--IYFVSSSLDFVMSL 243
+ + L L + + + L +L+ L ++ I F +L
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS-NL 148
Query: 244 KNLKDLSLRNALITGTIPSGI-GELQNLQ----TLDLSFNNLTGQIPRTLFNIDSLNYLF 298
NL+ L L + I +I L + +LDLS N + I F L L
Sbjct: 149 TNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELA 206
Query: 299 LGNNSLSGTLPT---QKSENLQNIDLSYN 324
L N L ++P + +LQ I L N
Sbjct: 207 LDTNQLK-SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 16/167 (9%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L L N + S L+ L +S + SL +L L L
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 256 ITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNI-DSLNYLFLGNNSLSGTLPT--- 310
I ++ G L +LQ L NL + +L L + +N + +
Sbjct: 88 IQ-SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQ-SFKLPEY 144
Query: 311 -QKSENLQNIDLSYNHLS----GPF---PSWVTSSLQMNLAVNNFTF 349
NL+++DLS N + +L ++L++N F
Sbjct: 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 260 IPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSEN 315
IP + + + LDLSFN L + F + L L L + T+ Q +
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSH 77
Query: 316 LQNIDLSYNHLS 327
L + L+ N +
Sbjct: 78 LSTLILTGNPIQ 89
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 10/142 (7%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHN-VFSGPVPRELGNLKELNLLSLA 132
L L L L +F G+L L L++AHN + S +P NL L L L+
Sbjct: 99 LSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLS 157
Query: 133 NNNFSGALPPEI-GNLAKLEELYID---SCGASGEIPS-TFAKLHNMQILRASDAHFTGK 187
+N ++ L ++ L + S I F ++ ++ L
Sbjct: 158 SNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSV 215
Query: 188 IPDFIGNWTKLTALRLQGNSFQ 209
T L + L N +
Sbjct: 216 PDGIFDRLTSLQKIWLHTNPWD 237
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 1e-16
Identities = 47/289 (16%), Positives = 99/289 (34%), Gaps = 30/289 (10%)
Query: 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN---VFSGPVPRELGNLKEL 126
+ + T L+ + + ++ G + L +
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSVQG-----IQYLPNV 70
Query: 127 NLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG 186
L L N + + P + NL L L++D ++ S+ L ++ L +
Sbjct: 71 TKLFLNGNKLT-DIKP-LANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNGIS- 125
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLK 244
I + + + +L +L L N + + LS+L L++L + D I S + + L
Sbjct: 126 DI-NGLVHLPQLESLYLGNN--KITDITVLSRLTKLDTLSLEDNQI----SDIVPLAGLT 178
Query: 245 NLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
L++L L I+ + L+NL L+L + N+ N + + SL
Sbjct: 179 KLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 236
Query: 305 SGTLPTQKSEN--LQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDG 351
P S++ + ++ ++ + + F G
Sbjct: 237 --VTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHG 283
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 2e-15
Identities = 39/220 (17%), Positives = 72/220 (32%), Gaps = 24/220 (10%)
Query: 117 PRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQI 176
R+ ++L L + S L E+ + +L+EL ++ I L +
Sbjct: 342 CRDSATDEQLFRCEL-SVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 177 LRASDAHF---TGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFV 233
+ + +F P L + L NS + + L L ++ + +
Sbjct: 401 EKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVL-HLAHKDLTVLCHL 459
Query: 234 SSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNID- 292
L + L L + + +P + L+ L+ L S N L + +
Sbjct: 460 EQ-------LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-----NVDGVAN 506
Query: 293 --SLNYLFLGNN---SLSGTLPTQKSENLQNIDLSYNHLS 327
L L L NN + P L ++L N L
Sbjct: 507 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 2e-05
Identities = 23/115 (20%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 70 EELVTLQYLTFLK---IDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKEL 126
L L+ L + + N LP + L L +L + N + NL L
Sbjct: 454 TVLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALE--NVDGVANLPRL 510
Query: 127 NLLSLANNNFSG-ALPPEIGNLAKLEELYIDS---CGASGEIPSTFAKLHNMQIL 177
L L NN A + + +L L + C G L ++ +
Sbjct: 511 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 3e-15
Identities = 43/259 (16%), Positives = 85/259 (32%), Gaps = 17/259 (6%)
Query: 94 SFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEEL 153
L+ +L + V L + + N+N +L + L+EL
Sbjct: 13 FPDPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKEL 68
Query: 154 YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG-NWTKLTALRLQGNSFQGPI 212
++ S ++ S L ++ L + ++ + G L+ L L N +
Sbjct: 69 HLSHNQIS-DL-SPLKDLTKLEELSVNR----NRLKNLNGIPSACLSRLFLDNNELRDT- 121
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
SL L +LE L I + S+ + L L+ L L IT G+ L+ +
Sbjct: 122 -DSLIHLKNLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGNEIT-NT-GGLTRLKKVNW 176
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPS 332
+DL+ + + + N + + + + + +
Sbjct: 177 IDLTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYYISNGGSYVDGCVLWELPVYTDEV 236
Query: 333 WVTSSLQMNLAVNNFTFDG 351
S +N+ FDG
Sbjct: 237 SYKFSEYINVGETEAIFDG 255
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
I+ ++ L N +L +T EL +Q + +N+ +
Sbjct: 8 PINQVFPDPG-------LANAVKQNLGKQSVTDL--VSQKELSGVQNFNGDNSNIQ-SLA 57
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVN 345
+ +L L L +N +S P + L+ + ++ N L ++ L N
Sbjct: 58 -GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNN 116
Query: 346 NFTFDGSNISVFPGLQCL 363
D ++ L+ L
Sbjct: 117 ELR-DTDSLIHLKNLEIL 133
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 5e-15
Identities = 34/231 (14%), Positives = 68/231 (29%), Gaps = 33/231 (14%)
Query: 102 LTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGA 160
L L NL ++ + ++ + L NL+K+ + I +
Sbjct: 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRN 92
Query: 161 SGEIPS-TFAKLHNMQILRASDAHFTGKIPD--FIGNWTKLTALRLQGNSFQGPIPS-SL 216
I +L ++ L + PD + + L + N + IP +
Sbjct: 93 LTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAF 151
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
L + L L N T ++ L + L+
Sbjct: 152 QGLCNE-----------------------TLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187
Query: 277 FNNLTGQIPRTLFN--IDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNH 325
N I + F + L + S++ LP++ E+L+ +
Sbjct: 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 42/234 (17%), Positives = 73/234 (31%), Gaps = 37/234 (15%)
Query: 125 ELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQILRASDA 182
L L + +P NL + +Y+ ++ S +F L + + +
Sbjct: 32 STQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90
Query: 183 HFTGKIPD--FIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
I L L + + P L+K+ S + I +I
Sbjct: 91 RNLTYIDPDALKEL-PLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEI---------- 137
Query: 241 MSLKNLKDLSLRNALITGTIPSGI-GELQN-LQTLDLSFNNLTGQIPRTLFNIDSLNYLF 298
N +T +IP L N TL L N T + FN L+ ++
Sbjct: 138 ----------TDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVY 185
Query: 299 LGNNSLSGTLP----TQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFT 348
L N + +D+S ++ PS L+ +A N +T
Sbjct: 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKGLEHLKELIARNTWT 238
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 9e-15
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 6/175 (3%)
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L L+ N + +L +L +D + ++ L + L S +
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SL 92
Query: 189 PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKD 248
P LT L + N +L L L+ L + + + L+
Sbjct: 93 PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152
Query: 249 LSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNN 302
LSL N +T +P+G+ L+NL TL L N+L IP+ F L + FL N
Sbjct: 153 LSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 8e-13
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
T L L N ++L L L + + L +L L L L +
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL--TKLQVDGTLPVLGTLDLSHNQ 88
Query: 256 ITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---Q 311
+ ++P L L LD+SFN LT +P + L L+L N L TLP
Sbjct: 89 LQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLT 145
Query: 312 KSENLQNIDLSYNHLS 327
+ L+ + L+ N+L+
Sbjct: 146 PTPKLEKLSLANNNLT 161
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 9e-06
Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPTQKSENLQ 317
+P + ++ L LS N L L L L L+ L
Sbjct: 24 ALPPDL--PKDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLG 80
Query: 318 NIDLSYNHLS 327
+DLS+N L
Sbjct: 81 TLDLSHNQLQ 90
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 626 IESKPNTFSYAELRSATKDFDPSN-----KLGEGGYGPVYKGTLSDGR------VIAVKQ 674
I P FS A + + +LGEG +G V+ + ++AVK
Sbjct: 23 IIENPQYFSDACV----HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA 78
Query: 675 LSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
L AS + F E ++ +QH+++VR +G C EG L+V+ EY G L
Sbjct: 79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF------EYMRHGDLNR 132
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 7e-13
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDG----RVIAVKQL--SIASHQGKNQFVNEIATISAVQHRNLV 702
LG+G +G V + L +AVK L I + +F+ E A + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+L G + + + + + G L
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDL 118
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
+LGEG +G V+ + ++AVK L + + F E ++ +QH ++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+ YG C +G ++V+ EY G L +
Sbjct: 81 KFYGVCGDGDPLIMVF------EYMKHGDLNK 106
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 7e-12
Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 27/183 (14%)
Query: 610 YMRRKKDNDDEEVLVGIESKPNTFSYAELRSATKD----FDPSN-----KLGEGGYGPVY 660
Y ++ + +++ S N + Y + R D F N LG G +G V
Sbjct: 3 YKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVM 62
Query: 661 KGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGA 712
T +AVK L A + ++E+ ++ + H N+V L G C
Sbjct: 63 NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122
Query: 713 RRLLVYDGYLAPEYAMRG----HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLE 768
L++ EY G +L K + FS + E ++ LL
Sbjct: 123 PIYLIF------EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 176
Query: 769 WAW 771
+A+
Sbjct: 177 FAY 179
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 7e-12
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
LGEG +G V K T + +AVK L AS ++E + V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
++LYG C + LL+ EYA G L
Sbjct: 89 IKLYGACSQDGPLLLIV------EYAKYGSL 113
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 9e-12
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 42/202 (20%)
Query: 106 SLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEI 164
SL F L +L LL L +N LP I L LE L++ +
Sbjct: 51 SLPSKAFHR--------LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ-AL 100
Query: 165 PS-TFAKLHNMQILRASDAHFTGKIPDFI-GNWTKLTALRLQGNSFQGPIPSSLSKLASL 222
P F +L N+ LR +P + + TKLT L L N +L SL
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYN-----------ELQSL 148
Query: 223 ESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLT 281
D L +LK+L L N + +P G +L L+TL L N L
Sbjct: 149 PK----------GVFD---KLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK 194
Query: 282 GQIPRTLF-NIDSLNYLFLGNN 302
++P F +++ L L L N
Sbjct: 195 -RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L LQ N + +L L L ++D + LKNL+ L + +
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 256 ITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT--- 310
+ +P G+ +L NL L L N L +P +F ++ L YL LG N L +LP
Sbjct: 97 LQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVF 153
Query: 311 QKSENLQNIDLSYNHLS 327
K +L+ + L N L
Sbjct: 154 DKLTSLKELRLYNNQLK 170
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSE 314
IPS I + + LDL N L+ +P F + L L+L +N L TLP ++ +
Sbjct: 30 AIPSNI--PADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELK 85
Query: 315 NLQNIDLSYNHLS 327
NL+ + ++ N L
Sbjct: 86 NLETLWVTDNKLQ 98
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 649 NKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V + G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
G C RR L L EY G L
Sbjct: 107 YKGVCYSAGRRNL----KLIMEYLPYGSL 131
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 649 NKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V + G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
G C RR L L EY G L
Sbjct: 76 YKGVCYSAGRRNL----KLIMEYLPYGSL 100
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 649 NKLGEGGYGPVYKGTL-----SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLV 702
LGEG +G V G ++AVK L + A Q ++ + EI + + H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ GCC + L L EY G L
Sbjct: 97 KYKGCCEDAGAASL----QLVMEYVPLGSL 122
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK-------NQFVNEIATIS 694
+ + ++G+GG+G V+KG + D V+A+K L + +G+ +F E+ +S
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 695 AVQHRNLVRLYGCCIE 710
+ H N+V+LYG
Sbjct: 79 NLNHPNIVKLYGLMHN 94
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 721 YLAPE--YAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ 778
++APE A TEKAD +SF ++ +++G D KI ++ + E
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-YSYGKI---KFINMIREEGL 247
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
PT+ E VI LC P RP S +V L
Sbjct: 248 R-----PTIPEDCPPRLRNVI---ELCWSGDPKKRPHFSYIVKEL 284
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G +A+K + AS + + +F+NE + + ++
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
VRL G +G L++ E RG L
Sbjct: 91 VRLLGVVSQGQPTLVIM------ELMTRGDL 115
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+GEG +G V++ ++AVK L AS + F E A ++ + N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
V+L G C G L++ EY G L
Sbjct: 113 VKLLGVCAVGKPMCLLF------EYMAYGDL 137
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 649 NKLGEGGYGPVYKGTLSDGR----VIAVKQL--SIASHQGKNQFVNEIATISAVQHRNLV 702
LGEG +G V +G L +AVK + +S + +F++E A + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
RL G CIE + + + + + G L
Sbjct: 100 RLLGVCIEMSSQGIPKP-MVILPFMKYGDL 128
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 649 NKLGEGGYGPVYKGTL-----SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLV 702
LGEG +G V + G +AVK L + EI + + H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ G C E + L E+ G L
Sbjct: 87 KYKGICTEDGGNGI----KLIMEFLPSGSL 112
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 5e-11
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSI--ASHQGKNQFVNEIATISAVQHRN 700
K + KL E G ++KG G I VK L + S + F E + H N
Sbjct: 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
++ + G C L + G L
Sbjct: 69 VLPVLGACQSPPAPHP----TLITHWMPYGSL 96
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 25/110 (22%)
Query: 721 YLAPEYAMRG----HLTEKADVFSFGVVALEVISGR---ANSDNSLDTEKIYLLEWAWNL 773
++APE A++ AD++SF V+ E+++ A+ N +E +
Sbjct: 174 WVAPE-ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN---------MEIGMKV 223
Query: 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
PT+ +++ +C P RP +V +L
Sbjct: 224 ALEGLR-----PTIPPGISPHVSKLM---KICMNEDPAKRPKFDMIVPIL 265
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-11
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
K + KLGEGG+ V L DG A+K++ Q + + E H N+
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+RL C+ ++ +L + RG L
Sbjct: 89 LRLVAYCLRERGA--KHEAWLLLPFFKRGTL 117
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-11
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 635 YAELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV 687
A LR DP K+GEG G V GR +AVK + + Q +
Sbjct: 31 KAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF 90
Query: 688 NEIATISAVQHRNLVRLYGCCIEG 711
NE+ + QH N+V +Y + G
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVG 114
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 635 YAELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV 687
+LRS DP K+G+G G VY ++ G+ +A++Q+++ K +
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 688 NEIATISAVQHRNLVRLYGCCIEG 711
NEI + ++ N+V + G
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVG 89
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
VR G ++ R ++ E G L
Sbjct: 96 VRCIGVSLQSLPRFILM------ELMAGGDL 120
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 649 NKLGEGGYGPVYKGTL-----SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
++LG+G +G V + G ++AVKQL + + F EI + A+ +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
G R+ L L EY G L
Sbjct: 89 YRGVSYGPGRQSL----RLVMEYLPSGCL 113
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 7e-11
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LGE +G VYKG L +A+K L A + +F +E + +QH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
V L G + +++ Y G L E
Sbjct: 75 VCLLGVVTKDQPLSMIF------SYCSHGDLHE 101
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 9e-11
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
VR G ++ R ++ E G L
Sbjct: 137 VRCIGVSLQSLPRFILL------ELMAGGDL 161
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 9e-11
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ----GKNQFVNEIATISAVQHRNLVRL 704
+G GG+G VY+ G +AVK + E + ++H N++ L
Sbjct: 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHL 732
G C++ LV E+A G L
Sbjct: 72 RGVCLKEPNLCLVM------EFARGGPL 93
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE ++ +DV+S+GV+ E+++G I L A+ + N +
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG------IDGLAVAYGVAMNKLA- 232
Query: 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ + +++ C P RP + ++ L
Sbjct: 233 ----LPIPSTCPEPFAKLM---EDCWNPDPHSRPSFTNILDQL 268
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 9e-11
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 19/110 (17%)
Query: 637 ELRSATKDFDP---------SNKLGEGGYGPVYKGTLSDGR----VIAVKQL-SIASHQG 682
EL A + + +G G +G VY GTL D AVK L I
Sbjct: 10 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 69
Query: 683 KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+QF+ E + H N++ L G C+ LV Y G L
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV-----VLPYMKHGDL 114
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ + +G G +G V K + +A+KQ+ S + F+ E+ +S V H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64
Query: 703 RLYGCCIE 710
+LYG C+
Sbjct: 65 KLYGACLN 72
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 33/159 (20%), Positives = 51/159 (32%), Gaps = 34/159 (21%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE + +EK DVFS+G++ EVI+ R D W +H +
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI----MWAVHNGTR-- 222
Query: 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYLT 840
P L + K ++ C P RP M +V ++
Sbjct: 223 ----PPLIKNLPKPIESLM---TRCWSKDPSQRPSMEEIVKIM----------------- 258
Query: 841 DWDFKDITASFLNEDTPTPSSSIKRRKSKEKSQRENPVD 879
+ F D P E + E VD
Sbjct: 259 ----THLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVD 293
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRNLVRLYG 706
K+G G +G V++ G +AVK L + N+F+ E+A + ++H N+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHL 732
+ +V EY RG L
Sbjct: 102 AVTQPPNLSIVT------EYLSRGSL 121
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE EK+DV+SFGV+ E+ + + N L+ ++ + +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN-LNPAQV-----VAAVGFKCKR- 257
Query: 781 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ + + +I C P RP + ++ +L
Sbjct: 258 ----LEIPRNLNPQVAAII---EGCWTNEPWKRPSFATIMDLL 293
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 24/145 (16%)
Query: 606 SIVFYMRRKKDNDD--EEVLVGIESKPNTFSYAELRSATK-DFDPSN-----KLGEGGYG 657
+ +Y + D + + S EL + + LGEG +G
Sbjct: 24 GMGYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFG 83
Query: 658 PVYKGTL--------SDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRNLVRLYGC 707
V + +AVK L S A+ + + ++E+ + + +H+N++ L G
Sbjct: 84 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 143
Query: 708 CIEGARRLLVYDGYLAPEYAMRGHL 732
C + ++ EYA +G+L
Sbjct: 144 CTQDGPLYVIV------EYASKGNL 162
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 24/123 (19%)
Query: 628 SKPNTFSYAELRSATKD---FDPSN-----KLGEGGYGPVYKGTLSDGR--------VIA 671
P +E F LGEG +G V +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 672 VKQL-SIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMR 729
VK L A+ + + V+E+ + + +H+N++ L G C + ++ EYA +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV------EYASK 125
Query: 730 GHL 732
G+L
Sbjct: 126 GNL 128
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 24/131 (18%)
Query: 620 EEVLVGIESKPNTFSYAELRSATKD---FDPSN-----KLGEGGYGPVYKGTLSDGR--- 668
L P +E F LGEG +G V
Sbjct: 50 TTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDK 109
Query: 669 -----VIAVKQL-SIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYDGY 721
+AVK L A+ + + V+E+ + + +H+N++ L G C + ++
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV--- 166
Query: 722 LAPEYAMRGHL 732
EYA +G+L
Sbjct: 167 ---EYASKGNL 174
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-10
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 649 NKLGEGGYGPVYKGTLSDGR----VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
+G+G +G VY G D A+K L I Q F+ E + + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G + ++ Y G L
Sbjct: 87 LIGIMLPPEGLP-----HVLLPYMCHGDL 110
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-10
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LG G +G V + T +AVK L S A K ++E+ +S + QH N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+V L G C G L++ EY G L
Sbjct: 112 IVNLLGACTHGGPVLVIT------EYCCYGDL 137
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 649 NKLGEGGYGPVYKGTL------SDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LG G +G V + + R +AVK L A+H ++E+ + + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+V L G C + L + E+ G+L
Sbjct: 93 VVNLLGACTKPGGPL-----MVIVEFCKFGNL 119
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 645 FDPS-----NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQH 698
F PS LG+G +G K T G V+ +K+L + + F+ E+ + ++H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 699 RNLVRLYGCCIEGARRLLV 717
N+++ G + R +
Sbjct: 67 PNVLKFIGVLYKDKRLNFI 85
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 9e-06
Identities = 22/101 (21%), Positives = 30/101 (29%), Gaps = 13/101 (12%)
Query: 723 APEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782
APE EK DVFSFG+V E+I + L + L
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-----VRGFLDRYC 244
Query: 783 VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
F + + C P RP ++ L
Sbjct: 245 PPNCPPSFFP--------ITVRCCDLDPEKRPSFVKLEHWL 277
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 612 RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVI 670
+ D+E VL+ + KP + Y R ++G G +G V++ G
Sbjct: 30 LGPETEDNEGVLLTEKLKPVDYEY---REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQC 86
Query: 671 AVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
AVK++ + + V E+ + + +V LYG EG
Sbjct: 87 AVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREG 122
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 637 ELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNE 689
E +D DP+ +LG+G +G VYK G + A K + S + ++ E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 690 IATISAVQHRNLVRLYGCCIEG 711
I ++ H +V+L G
Sbjct: 67 IEILATCDHPYIVKLLGAYYHD 88
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 4e-10
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 215 SLSKLASLE-SLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTL 273
++ +E I I + ++L +LK K L+L I I S + ++NL+ L
Sbjct: 21 VATEAEKVELHGMIPPIEKMDATLS---TLKACKHLALSTNNIE-KI-SSLSGMENLRIL 75
Query: 274 DLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
L N + +I D+L L++ N ++ +K NL+ + +S N ++
Sbjct: 76 SLGRNLIK-KIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKIT 128
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 4e-10
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 649 NKLGEGGYGPVYKGTLSDG---RVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRNLVR 703
+ +GEG +G V K + A+K++ AS F E+ + + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C L EYA G+L
Sbjct: 91 LLGACEHRGYLYLAI------EYAPHGNL 113
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG G V AVK L++ + Q F NE+ + +H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 707 CCIE 710
Sbjct: 88 YSTA 91
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 721 YLAPE---YAMRGHLTEKADVFSFGVVALEVISGR---ANSDNSLDTEKIYLLEWAWNLH 774
++APE + ++DV++FG+V E+++G+ +N +N ++I +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQII-----EMVG 239
Query: 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ S L + K R++ C + RP R++A +
Sbjct: 240 RGSLSPDL--SKVRSNCPKRMKRLM---AECLKKKRDERPSFPRILAEI 283
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 20/165 (12%)
Query: 583 NKNHTGMIVGIAVPLGILGLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYA-ELRSA 641
G++V P + + + +K +++ + + EL A
Sbjct: 19 ASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQA 78
Query: 642 TKDFDP---------SNKLGEGGYGPVYKGTLSDGR----VIAVKQL-SIASHQGKNQFV 687
+ + +G G +G VY GTL D AVK L I +QF+
Sbjct: 79 VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 138
Query: 688 NEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
E + H N++ L G C+ + Y G L
Sbjct: 139 TEGIIMKDFSHPNVLSLLGICLRSEGSP-----LVVLPYMKHGDL 178
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
LG+G YG VY G LS+ IA+K++ + EIA ++H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 710 EG 711
E
Sbjct: 90 EN 91
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 14/141 (9%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISD---IYFVSSSLDFVMSLKNLKDLSLR 252
T L +L L N + + +L L +S L+ L+ L L
Sbjct: 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS---DLQALEVLLLY 120
Query: 253 NALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF----NIDSLNYLFLGNNSLSGT 307
N I + ++ LQ L LS N ++ + P L + L L L +N L
Sbjct: 121 NNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-K 177
Query: 308 LPTQKSENLQNIDLSYNHLSG 328
LP + L + +L
Sbjct: 178 LPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 41/205 (20%), Positives = 71/205 (34%), Gaps = 41/205 (20%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFI-GNL 99
C C N +C +L +P+ L + Y L + N + + L
Sbjct: 15 NCLC-ASNILSCSKQQLPN--------VPQSLPS--YTALLDLSHNNLSRLRAEWTPTRL 63
Query: 100 SRLTLLSLAHN--------VFSGPVPRELGNLKELNLLSLANNNFSGALPPEI-GNLAKL 150
+ L L L+HN F + NL+ L+L ++N+ L + +L L
Sbjct: 64 TNLHSLLLSHNHLNFISSEAFVP-----VPNLRYLDL---SSNHLH-TLDEFLFSDLQAL 114
Query: 151 EELYIDSCGASGEI----PSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALR---L 203
E L + + I + F + +Q L S + + I + KL L L
Sbjct: 115 EVLLLYNN----HIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDL 170
Query: 204 QGNSFQGPIPSSLSKLASLESLRIS 228
N + + L KL + +
Sbjct: 171 SSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSE 314
+P + LDLS NNL+ + +L+ L L +N L+ + +
Sbjct: 32 NVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88
Query: 315 NLQNIDLSYNHLSGPFPSWV---TSSLQM-NLAVNNFTFDGSNISVFPGLQCLQR 365
NL+ +DLS NHL ++ +L++ L N+ N F + LQ+
Sbjct: 89 NLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRN--AFEDMAQLQK 140
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 6e-10
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 639 RSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNE--IATISAV 696
R+ +D +G+G YG V++G+ G +AVK S + + + E + +
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVML 59
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+H N++ + +L Y G L
Sbjct: 60 RHENILGFIASDMTSRHSSTQL--WLITHYHEMGSL 93
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 6e-10
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 650 KLGEGGYGPVYKGTLSDGRV-IAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
++G G +G V+ G L +AVK K +F+ E + H N+VRL G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 708 CIEGARRLLV 717
C + +V
Sbjct: 181 CTQKQPIYIV 190
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 8e-10
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 649 NKLGEGGYGPVYKGTLSDGR------VIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LG G +G V + T +AVK L A + ++E+ +S + H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+V L G C G L++ EY G L
Sbjct: 89 IVNLLGACTIGGPTLVI------TEYCCYGDL 114
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 9e-10
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 15/104 (14%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
DF +G GG+G V+K DG+ +K++ + E+ ++ + H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNI 66
Query: 702 VRLYGCCIEGARRLLVYDGYLAP----------EYAMRGHLTEK 735
V GC + E+ +G L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 9e-10
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+G+G +G V G +V AVK + + F+ E + ++ ++H NLV+L G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 709 IEGARRLLVYDGYLAPEYAMRGHL 732
+E L Y+ EY +G L
Sbjct: 84 VEEKGGL-----YIVTEYMAKGSL 102
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRN 700
DF+P LG GG+G V++ D A+K++ + + + + E+ ++ ++H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 701 LVRLYGCCIE 710
+VR + +E
Sbjct: 65 IVRYFNAWLE 74
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 709 IE 710
+
Sbjct: 78 TQ 79
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
Query: 650 KLGEGGYGPVYKGTLSDGRV--------IAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
LG+G + ++KG + + +K L A F + +S + H++L
Sbjct: 15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
V YG C+ G +LV E+ G L
Sbjct: 75 VLNYGVCVCGDENILVQ------EFVKFGSL 99
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258
T +RL+ N+ + P + S L + +S+ + D L++L L L IT
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT- 93
Query: 259 TIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKS 313
+P + L +LQ L L+ N + + F ++ +LN L L +N L T+
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPL 151
Query: 314 ENLQNIDLSYN 324
+Q + L+ N
Sbjct: 152 RAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 44/161 (27%)
Query: 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRELGNLKELNLLS 130
T +++++N P +L + L++N F G L+ LN L
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG--------LRSLNSLV 86
Query: 131 LANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIP 189
L N + LP + L L+ L L+ +I +
Sbjct: 87 LYGNKIT-ELPKSLFEGLFSLQLLL----------------LNANKI---------NCLR 120
Query: 190 DFI-GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISD 229
+ L L L N Q + S L +++++ ++
Sbjct: 121 VDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSE 314
IP+ + E + + L N + IP F L + L NN +S L Q
Sbjct: 25 EIPTNLPE--TITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLR 80
Query: 315 NLQNIDLSYNHLS 327
+L ++ L N ++
Sbjct: 81 SLNSLVLYGNKIT 93
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISD--IYFVSSSLDFVMSLKNLKDLSLRN 253
KL + L N P + L SL SL + I + SL F L +L+ L L
Sbjct: 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSL-FE-GLFSLQLLLLNA 113
Query: 254 ALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
I + +L NL L L N L I + F + ++ + L N
Sbjct: 114 NKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 245 NLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFN-IDSLNYLFLGNN 302
+ ++ L I IP G + L+ +DLS N ++ ++ F + SLN L L N
Sbjct: 33 TITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGN 90
Query: 303 SLSGTLPT---QKSENLQNIDLSYNHLS 327
++ LP + +LQ + L+ N ++
Sbjct: 91 KIT-ELPKSLFEGLFSLQLLLLNANKIN 117
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+G+G +G V G +V AVK + + F+ E + ++ ++H NLV+L G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 709 IEGARRLLVYDGYLAPEYAMRGHL 732
+E L Y+ EY +G L
Sbjct: 256 VEEKGGL-----YIVTEYMAKGSL 274
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 627 ESKPNTFSYAELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS 679
+ + ++ DP ++G G +G VY + + V+A+K++S +
Sbjct: 32 GGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG 91
Query: 680 HQGKNQF---VNEIATISAVQHRNLVRLYGCCIEG 711
Q ++ + E+ + ++H N ++ GC +
Sbjct: 92 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 126
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAV 696
S +D++ +G G YG K SDG+++ K+L + K V+E+ + +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
+H N+VR Y I+ L Y+ EY G L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGDLASV 97
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DF+ LG+G +G V K D R A+K++ + + ++E+ ++++ H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63
Query: 701 LVRLYGCCIEGARRLLVYDG-------YLAPEYAMRGHLTEK 735
+VR Y +E + ++ EY G L +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL 105
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 17/112 (15%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRNLVRLYG 706
+G+G +G VY G G V A++ + I F E+ +H N+V G
Sbjct: 39 ELIGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 707 CCIEGARRLLVYDGYLAPEYAMRG----HLTEKADVFSFGVV---ALEVISG 751
C+ ++ + + V A E++ G
Sbjct: 97 ACMSPPHLAII------TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 31/116 (26%)
Query: 721 YLAPE---------YAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAW 771
+LAPE + ++ +DVF+ G + E+ + EW +
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR----------------EWPF 243
Query: 772 NLHENNQSLGLVD----PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ + P L++ + + I L C RP ++++ ML
Sbjct: 244 KTQPAEAIIWQMGTGMKPNLSQIGMGKEISDI--LLFCWAFEQEERPTFTKLMDML 297
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-09
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
+LG G +G V G +AVK + +++F E T+ + H LV+ YG C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
+ +V EY G L
Sbjct: 74 KEYPIYIVT------EYISNGCL 90
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQH 698
+DF N LG+G + VY+ + G +A+K + + + NE+ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+++ LY E + + YL E G +
Sbjct: 71 PSILELYN-YFEDSNYV-----YLVLEMCHNGEM 98
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
+KLG G YG VY+G + +AVK L +F+ E A + ++H NLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 708 CIEGARRLLVYDGYLAPEYAMRGHL 732
C ++ E+ G+L
Sbjct: 78 CTREPPFYIIT------EFMTYGNL 96
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 8e-09
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V G +A+K + +++F+ E + + H LV+LYG C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 709 IEGARRLLVYDGYLAPEYAMRGHL 732
+ ++ EY G L
Sbjct: 89 TKQRPIFIIT------EYMANGCL 106
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQH 698
+DF+ LG+G +G VY ++A+K L + ++Q E+ S ++H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++RLYG A R+ YL EYA G +
Sbjct: 69 PNILRLYG-YFHDATRV-----YLILEYAPLGTV 96
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-08
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG G +G V+ T + +AVK + F+ E + +QH LV+L+
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 709 IE 710
+
Sbjct: 253 TK 254
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQL---SIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
LG+GG+ ++ + V A K + + + + EI+ ++ H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
E + ++ E R L E
Sbjct: 83 -FFEDNDFV-----FVVLELCRRRSLLEL 105
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 612 RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVI 670
R ++ +D EE+ N + + ++G G + VYKG +
Sbjct: 4 RNQQQDDIEELETKAVGMSNDGRFLKFD---------IEIGRGSFKTVYKGLDTETTVEV 54
Query: 671 AVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714
A +L + + +F E + +QH N+VR Y +
Sbjct: 55 AWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 100
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-08
Identities = 64/335 (19%), Positives = 114/335 (34%), Gaps = 65/335 (19%)
Query: 51 TCHITKLRVYA--LNKKGV--IPEELVTLQYLTFLKIDRNFFTGP-----LPSFIGNLSR 101
+C I KL + L G + L TL L L + N + R
Sbjct: 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCR 143
Query: 102 LTLLSLAHNVFSGPVPRELG-------NLKELNLLSLANNNFSGALPPEIG-----NLAK 149
L L L + S L + KEL + +NN+ + A + + +
Sbjct: 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV---SNNDINEAGVRVLCQGLKDSPCQ 200
Query: 150 LEELYIDSCGASGE----IPSTFAKLHNMQILRASDAHFTGK-----IPDFIGNWTKLTA 200
LE L ++SCG + + + A +++ L P + ++L
Sbjct: 201 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 260
Query: 201 LRLQGNSFQGP----IPSSLSKLASLESLRISD-------IYFVSSSLDFVMSLKNLKDL 249
L + + L SL+ L ++ + +L L+ L
Sbjct: 261 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEP--GCQLESL 318
Query: 250 SLRNALITGT----IPSGIGELQNLQTLDLSFNNLTG----QIPRTLFNIDS-LNYLFLG 300
+++ T S + + + L L +S N L ++ + L S L L+L
Sbjct: 319 WVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLA 378
Query: 301 NN--------SLSGTLPTQKSENLQNIDLSYNHLS 327
+ SL+ TL + +L+ +DLS N L
Sbjct: 379 DCDVSDSSCSSLAATL--LANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-07
Identities = 57/312 (18%), Positives = 103/312 (33%), Gaps = 65/312 (20%)
Query: 57 LRVYALNKKGVIPEELVTLQYLTFLKIDRNFFT----GPLPSFIGNLSRLTLLSLAHNVF 112
++ L+ E L LQ +++D T + S + L L+L N
Sbjct: 10 IQCEELSDARWA-ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL 68
Query: 113 SGPVPRELGN-LKELNL----LSLANNNFS----GALPPEIGNLAKLEELYIDSC--GAS 161
+ L+ + LSL N + G L + L L+EL++ G +
Sbjct: 69 GDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDA 128
Query: 162 GEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ----GPIPSSLS 217
G +Q+L +L L+L+ S P+ S L
Sbjct: 129 G-----------LQLLCEGLLD----------PQCRLEKLQLEYCSLSAASCEPLASVLR 167
Query: 218 KLASLESLRISDIYFVSSSLDFVM-SLK----NLKDLSLRNALIT----GTIPSGIGELQ 268
+ L +S+ + + + LK L+ L L + +T + +
Sbjct: 168 AKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA 227
Query: 269 NLQTLDLSFNNLTGQ-----IPRTLFNIDSLNYLFLGNNSLSGT--------LPTQKSEN 315
+L+ L L N L P L L L++ ++ L + E+
Sbjct: 228 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVL--RAKES 285
Query: 316 LQNIDLSYNHLS 327
L+ + L+ N L
Sbjct: 286 LKELSLAGNELG 297
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
++G G +G V+ G + +A+K + + F+ E + + H LV+LYG C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 709 IEG 711
+E
Sbjct: 73 LEQ 75
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQHRNLVRLYG 706
LG+GG+ ++ + V A K + + + + EI+ ++ H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
E + ++ E R L E
Sbjct: 109 -FFEDNDFV-----FVVLELCRRRSLLEL 131
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 626 IESKPNTFSYAELRSATKDFDPSN-----KLGEGGYGPVYKGTL--SDGRVI--AVKQL- 675
E +Y + + +GEG +G V++G + + A+K
Sbjct: 368 AEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK 427
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 710
+ S + +F+ E T+ H ++V+L G E
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQH 698
+F K+G G + VY+ L DG +A+K++ I + + + EI + + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 699 RNLVRLYGCCIEG 711
N+++ Y IE
Sbjct: 92 PNVIKYYASFIED 104
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 649 NKLGEGGYGPVYKGTLSDGR-----VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLV 702
LG G +G VYKG +A+K+L S + + ++E +++V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 703 RLYGCCIE 710
RL G C+
Sbjct: 81 RLLGICLT 88
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
PS + +L L++ R ++ + L+ LS N +T +I + + +L L+
Sbjct: 16 PSDVKEL-VLDNSRSNEG----KLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKK 68
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNN---SLSGTLPTQKSENLQNIDLSYN 324
L+LS N ++G + +L +L L N LS P +K ENL+++DL
Sbjct: 69 LELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 29/127 (22%)
Query: 242 SLKNLKDLSLRNALIT-GTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
+ ++K+L L N+ G + E + L+ L LT ++ N+ LN
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLPKLN----- 64
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTS--SLQM-NLAVNNFTFDGSNISVF 357
L+ ++LS N +SG +L NL+ N D S I
Sbjct: 65 --------------KLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK-DLSTIEPL 109
Query: 358 PGLQCLQ 364
L+ L+
Sbjct: 110 KKLENLK 116
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFT--GPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
+ +G + + L FL T LP L++L L L+ N SG +
Sbjct: 29 SNEGKLEGLTDEFEELEFLSTINVGLTSIANLP----KLNKLKKLELSDNRVSGGLEVLA 84
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEEL 153
L L+L+ N I L KLE L
Sbjct: 85 EKCPNLTHLNLSGNKIKD--LSTIEPLKKLENL 115
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 30/160 (18%)
Query: 118 RELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQIL 177
R ++KEL L + +N G L +LE L + G + I + KL+ ++ L
Sbjct: 14 RTPSDVKELVLDNSRSNE--GKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKL 69
Query: 178 RASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSL 237
SD +G + LT L L GN + L+++E L+
Sbjct: 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGN--------KIKDLSTIEPLK----------- 110
Query: 238 DFVMSLKNLKDLSLRN---ALITGTIPSGIGELQNLQTLD 274
L+NLK L L N + + L L LD
Sbjct: 111 ----KLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 649 NKLGEGGYGPVYKGTL------SDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LG G +G V + + R +AVK L A+H ++E+ + + H N
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+V L G C + L + E+ G+L
Sbjct: 88 VVNLLGACTKPGGPL-----MVIVEFCKFGNL 114
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
+KLG G YG VY+G + +AVK L +F+ E A + ++H NLV+L G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 708 CIEGARRLLVYDGYLAPEYAMRGHL 732
C ++ E+ G+L
Sbjct: 285 CTREPPFYIIT------EFMTYGNL 303
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ-FVNEIATISAVQHR 699
+ F K+G+G +G V+KG +V+A+K + + + + + EI +S
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 700 NLVRLYGCCIEGAR 713
+ + YG ++ +
Sbjct: 81 YVTKYYGSYLKDTK 94
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 650 KLGEGGYGPVYKGTL--SDGRVI--AVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRL 704
LGEG +G VY+G G I AVK + K +F++E + + H ++V+L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 705 YGCCIE 710
G E
Sbjct: 79 IGIIEE 84
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 638 LRSATKDFDPS-----NKLGEGGYGPVYKGTLSDGR-----VIAVKQL-SIASHQGKNQF 686
++ + F + LG G +G V+KG + +K + + Q
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 62
Query: 687 VNEIATISAVQHRNLVRLYGCCIE 710
+ + I ++ H ++VRL G C
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCPG 86
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 629 KPNTFS--YAELRSATKDFDPSN-----KLGEGGYGPVYKGTL--SDGRVI--AVKQL-S 676
P+TF + K+ D +N +G G +G V G L + I A+K L
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 677 IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
+ + + F+ E + + H N++RL G +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS 118
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAV-Q 697
T +F K+G G +G V+K DG + A+K+ +A + + E+ + + Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 698 HRNLVRLYGCCIEG 711
H ++VR + E
Sbjct: 70 HSHVVRYFSAWAED 83
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNE--IATISAVQHRNLVRLYG 706
++G+G YG V+ G G +AVK + + E I ++H N++
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHL 732
I+G YL +Y G L
Sbjct: 99 ADIKGTGSWTQL--YLITDYHENGSL 122
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 3e-08
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG+G +G V+ GT + +A+K L F+ E + ++H LV+LY
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 709 IE 710
E
Sbjct: 249 SE 250
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 634 SYAELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF 686
+L + P KLGEG YG VYK G+++A+KQ+ + +
Sbjct: 14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEI 71
Query: 687 VNEIATISAVQHRNLVRLYGCCIEG 711
+ EI+ + ++V+ YG +
Sbjct: 72 IKEISIMQQCDSPHVVKYYGSYFKN 96
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 3e-08
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG+G +G V+ GT + +A+K L F+ E + ++H LV+LY
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 709 IE 710
E
Sbjct: 332 SE 333
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 650 KLGEGGYGPVYKGTLSDGRV-----IAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
+G G +G VYKG L +A+K L + + + + F+ E + H N++R
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 704 LYGCCIEG 711
L G +
Sbjct: 111 LEGVISKY 118
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 649 NKLGEGGYGPVYKGTL--SDGRVI--AVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
+G G G V G L R + A+K L + + + + F++E + + H N++R
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 704 LYGCCIEG 711
L G G
Sbjct: 115 LEGVVTRG 122
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNE--IATISAVQHRNLVRLYG 706
+G+G +G V++G G +AVK S + + + E I ++H N++
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIA 103
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHL 732
+ +L +Y G L
Sbjct: 104 ADNKDNGTWTQL--WLVSDYHEHGSL 127
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 650 KLGEGGYGPVYKGTL--SDGRVI--AVKQL---SIASHQGKNQFVNEIATISAVQHRNLV 702
KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + ++ HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 703 RLYGCCIE 710
RLYG +
Sbjct: 85 RLYGVVLT 92
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 4e-08
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 650 KLGEGGYGPVYKGTL--SDGRVI--AVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRL 704
+GEG +G V++G + + A+K + S + +F+ E T+ H ++V+L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 705 YGCCIE 710
G E
Sbjct: 82 IGVITE 87
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
P+++ +L L++ + +D NL+ LSL N + ++ S + +L L+
Sbjct: 23 PAAVREL-VLDNCKSNDGKI----EGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKK 75
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNN---SLSGTLPTQKSENLQNIDLSYN 324
L+LS N + G + + +L +L L N +S P +K E L+++DL
Sbjct: 76 LELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 23/93 (24%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 63 NKKGVIPEELVTLQYLTFLKIDRNFFT--GPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
+ G I L FL + LP L +L L L+ N G +
Sbjct: 36 SNDGKIEGLTAEFVNLEFLSLINVGLISVSNLP----KLPKLKKLELSENRIFGGLDMLA 91
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEEL 153
L L L+L+ N + L KLE L
Sbjct: 92 EKLPNLTHLNLSGNKLKD--ISTLEPLKKLECL 122
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHR 699
+ + K+GEG +G DGR +K+++I+ S + + + E+A ++ ++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
N+V+ E L Y+ +Y G L ++
Sbjct: 84 NIVQYRESFEEN-GSL-----YIVMDYCEGGDLFKR 113
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 13/121 (10%)
Query: 212 IPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNL 270
IP ++L L ++ + ++ F L L+ ++ N IT I G +
Sbjct: 30 IPQYTAEL----RLNNNEFTVLEATGIFK-KLPQLRKINFSNNKIT-DIEEGAFEGASGV 83
Query: 271 QTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHL 326
+ L+ N L + +F ++SL L L +N ++ + +++ + L N +
Sbjct: 84 NEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQI 141
Query: 327 S 327
+
Sbjct: 142 T 142
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISD---IYFVSSSLDFVMSLKNLKDLSLR 252
+L + N + + + + ++ L++LK L LR
Sbjct: 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFK---GLESLKTLMLR 113
Query: 253 NALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
+ IT + + L +++ L L N +T + F + SL+ L L N
Sbjct: 114 SNRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 27/153 (17%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHN--------VFSGPVPRE 119
IP+ L L + TG L +L ++ ++N F G
Sbjct: 30 IPQYTAEL-RLNNNEFTVLEATGIF----KKLPQLRKINFSNNKITDIEEGAFEG----- 79
Query: 120 LGNLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPS-TFAKLHNMQIL 177
+N + L +N + ++ L L+ L + S + + + +F L ++++L
Sbjct: 80 ---ASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLL 134
Query: 178 RASDAHFTGKIPDFI-GNWTKLTALRLQGNSFQ 209
D T + L+ L L N F
Sbjct: 135 SLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFN 166
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 615 KDNDDEEVLVGIESKPNTFSYAELRSATKDF------DPSNKLGEGGYGPVYKGT-LSDG 667
K + V I + P F + + + + LG G +G V+K + G
Sbjct: 55 KSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATG 114
Query: 668 RVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
+A K + + K + NEI+ ++ + H NL++LY
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 650 KLGEGGYGPVYKGTL--SDGRV-IAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRLY 705
+LG G +G V +G ++ +A+K L + + E + + + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 706 GCC 708
G C
Sbjct: 77 GVC 79
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 649 NKLGEGGYGPVYKGTLSDGR-----VIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLV 702
LG G +G VYKG +A+K+L S + + ++E +++V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 703 RLYGCCIE 710
RL G C+
Sbjct: 81 RLLGICLT 88
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 634 SYAELRSATKDFDPSN------KLGEGGYGPVYKGTLSDGRV---IAVKQL--SIASHQG 682
+ E+R D +LG G +G V KG +V +AVK L
Sbjct: 2 ALEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 61
Query: 683 KNQFVNEIATISAVQHRNLVRLYGCC 708
K++ + E + + + +VR+ G C
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC 87
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 650 KLGEGGYGPVYKGTL--SDGRV-IAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRLY 705
+LG G +G V +G ++ +A+K L + + E + + + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 706 GCC 708
G C
Sbjct: 403 GVC 405
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 53.8 bits (128), Expect = 1e-07
Identities = 39/214 (18%), Positives = 64/214 (29%), Gaps = 41/214 (19%)
Query: 138 GALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG--NW 195
L P + + L L I L + L + + I +
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKS---LEIISGGLPDSVVEDILGSDL 218
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L L L ++ L S NLK L + +A
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKD---------------RFPNLKWLGIVDAE 263
Query: 256 ITGTIPSGIGE---LQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK 312
+ E L L+T+D+S LT + G L + K
Sbjct: 264 EQNVVVEMFLESDILPQLETMDISAGVLTDE----------------GARLLLDHVDKIK 307
Query: 313 SENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNN 346
+L+ I++ YN+LS + SL M + V++
Sbjct: 308 --HLKFINMKYNYLSDEMKKELQKSLPMKIDVSD 339
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 8e-05
Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 34/186 (18%)
Query: 114 GPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFA--KL 171
PV + L L + N + L+ L I S G + L
Sbjct: 165 SPVLDAMPLLNNLKIKGTNNLSIGKK------PRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 172 HNMQILR----ASDAHFTGKIPDFI-----GNWTKLTALRLQGNSFQGPIPSSLSKLASL 222
N++ L D F G + F + L L + Q + + L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 223 ESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTG 282
L ++D +S L D R + + ++++L+ +++ +N L+
Sbjct: 279 PQLE---------TMD--ISAGVLTDEGARL------LLDHVDKIKHLKFINMKYNYLSD 321
Query: 283 QIPRTL 288
++ + L
Sbjct: 322 EMKKEL 327
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQHR 699
DFD LG+G +G VY + ++A+K L + ++Q EI S ++H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++R+Y +R+ YL E+A RG L
Sbjct: 75 NILRMYN-YFHDRKRI-----YLMLEFAPRGEL 101
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRN 700
DF+P +G GG+G V++ D A+K++ + + + + E+ ++ ++H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 701 LVRLYGCCIEG 711
+VR + +E
Sbjct: 66 IVRYFNAWLET 76
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQHRN 700
D++ +G G V +A+K++++ Q ++ + EI +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 701 LVRLYGCCIEG 711
+V Y +
Sbjct: 75 IVSYYTSFVVK 85
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 631 NTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNE 689
+ + LR F+ +G G YG VYKG + G++ A+K + + + + + E
Sbjct: 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQE 70
Query: 690 IATISAV-QHRNLVRLYGC 707
I + HRN+ YG
Sbjct: 71 INMLKKYSHHRNIATYYGA 89
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAVQHRN 700
+ + ++G GG V++ ++ A+K L A +Q + + NEIA ++ +Q +
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 701 L--VRLYGC 707
+RLY
Sbjct: 69 DKIIRLYDY 77
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAVQHRN 700
+ + ++G GG V++ ++ A+K L A +Q + + NEIA ++ +Q +
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 701 L--VRLYGC 707
+RLY
Sbjct: 88 DKIIRLYDY 96
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 613 RKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIA 671
D E++ +P + +D +LG G +G V++ + GRV
Sbjct: 24 NDYDKFYEDIWKKYVPQPVEVKQGSVY---DYYDILEELGSGAFGVVHRCVEKATGRVFV 80
Query: 672 VKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
K ++ K NEI+ ++ + H L+ L+
Sbjct: 81 AKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 213 PSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQT 272
+L L +I I +L +L + + I + G L+ L+T
Sbjct: 18 AVRDREL-DLRGYKIPVI----ENLG--ATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKT 68
Query: 273 LDLSFNNLTGQIPRTLFNIDSLNYLFLGNN---SLSGTLPTQKSENLQNIDLSYN 324
L ++ N + + L L L NN L P ++L + + N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDS---LNYLF 298
+ ++L LR I I + L +D S N + L L L
Sbjct: 17 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-----KLDGFPLLRRLKTLL 70
Query: 299 LGNNSLSGTLPT--QKSENLQNIDLSYNHLS 327
+ NN + Q +L + L+ N L
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 33/212 (15%), Positives = 64/212 (30%), Gaps = 16/212 (7%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFS 137
+ + R+F PL + + + L +L LSL S
Sbjct: 72 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLS 131
Query: 138 GALPPEIGNLAKLEELYIDSCGA--SGEIPSTFAKLHNMQILRASDAHFTGKIPD----- 190
+ + + L L + C + + + + L + + +
Sbjct: 132 DPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL---NLSWCFDFTEKHVQV 188
Query: 191 -FIGNWTKLTALRLQGNSFQ---GPIPSSLSKLASLESLRISDIYFVS-SSLDFVMSLKN 245
+T L L G + + + + +L L +SD + L
Sbjct: 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248
Query: 246 LKDLSLRN-ALITGTIPSGIGELQNLQTLDLS 276
L+ LSL I +GE+ L+TL +
Sbjct: 249 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 280
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 41/237 (17%), Positives = 83/237 (35%), Gaps = 11/237 (4%)
Query: 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGA 160
+ + P+ + ++ + L + +KL+ L ++
Sbjct: 71 GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRL 130
Query: 161 SGEIPSTFAKLHNMQILRASD-AHFTGKIPDFIG-NWTKLTALRLQGN---SFQGPIPSS 215
S I +T AK N+ L S + F+ + + ++L L L + + +
Sbjct: 131 SDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190
Query: 216 LSKLASLESLRISDIY-FVSSS--LDFVMSLKNLKDLSLRN-ALITGTIPSGIGELQNLQ 271
++ L +S + S V NL L L + ++ +L LQ
Sbjct: 191 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250
Query: 272 TLDLSF-NNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
L LS ++ + L I +L L + GTL E L ++ ++ +H +
Sbjct: 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL-QLLKEALPHLQINCSHFT 306
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 4e-07
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 235 SSLDFVMSLKNLKDLSLRNALITGTIPSG-IGELQNLQTLDLSFNNLTGQIPRTLF-NID 292
SL + +NL +L + N + + L L+ L + + L + F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 293 SLNYLFLGNNSLSGTLP--TQKSENLQNIDLSYNHL 326
L+ L L N+L +L T + +LQ + LS N L
Sbjct: 81 RLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 1e-06
Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 9/91 (9%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSE 314
+ +NL L + + + L L + + L + +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 315 NLQNIDLSYNHLS----GPFPSWVTSSLQMN 341
L ++LS+N L L ++
Sbjct: 81 RLSRLNLSFNALESLSWKTVQGLSLQELVLS 111
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
Query: 42 CDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSF-IGNLS 100
C +G C R AL+ L + LT L I+ L + L
Sbjct: 5 CCPHGSSGLRC----TRDGALD----SLHHLPGAENLTELYIENQQHLQHLELRDLRGLG 56
Query: 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
L L++ + P L+ L+L+ N +L + L+EL +
Sbjct: 57 ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSG 112
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 21/135 (15%)
Query: 614 KKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAV 672
DN ++ +P + + +D +LG G +G V++ T + G A
Sbjct: 131 NYDNYVFDIWKQYYPQPVEIKHDHVLD---HYDIHEELGTGAFGVVHRVTERATGNNFAA 187
Query: 673 KQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEY------ 726
K + K EI T+S ++H LV L+ E + + E+
Sbjct: 188 KFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-EDDNEM-----VMIYEFMSGGEL 241
Query: 727 -----AMRGHLTEKA 736
++E
Sbjct: 242 FEKVADEHNKMSEDE 256
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 196 TKLTALRLQGNSFQGPIPSSLS---KLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLR 252
+ L L GN +S +L +L L ++ S L NLK+L L
Sbjct: 63 PNVRYLALGGNKLH-----DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117
Query: 253 NALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNIDSL---NYLFLGNNSLSGTL 308
+ ++P G+ +L NL L+L+ N L +P+ +F D L L L N L +L
Sbjct: 118 ENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVF--DKLTNLTELDLSYNQLQ-SL 172
Query: 309 PT---QKSENLQNIDLSYNHL 326
P K L+++ L N L
Sbjct: 173 PEGVFDKLTQLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 42/230 (18%)
Query: 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVF-SGPVPRELGNLKELNLLSLANNNFS 137
+ + T + L+ + + ++ S + L N++ L L N
Sbjct: 22 IKANLKKKSVTD-AVTQNE-LNSIDQIIANNSDIKSVQGIQYLPNVRYLAL----GGNKL 75
Query: 138 GALPPEIGNLAKLEELYIDSCGASGEIPST-FAKLHNMQILRASDAHFTGKIPDFIGNW- 195
+ + L L L + +P+ F KL N++ L + +PD + +
Sbjct: 76 HDISA-LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKL 132
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL-RNA 254
T LT L L N +L SL + D L NL +L L N
Sbjct: 133 TNLTYLNLAHN-----------QLQSLPK-GVFD------------KLTNLTELDLSYNQ 168
Query: 255 LITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
L ++P G+ +L L+ L L N L +P +F + SL Y++L +N
Sbjct: 169 L--QSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 215
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAV-QH 698
+ F ++LG G YG V+K DGR+ AVK+ + + + + E+ + V QH
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 699 RNLVRLYGCCIEG 711
VRL EG
Sbjct: 117 PCCVRLEQAWEEG 129
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 30/177 (16%)
Query: 129 LSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKI 188
L L + + L KL L +D F L + L ++ +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 189 PDFI-GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLK 247
P + + T+L L L GN +L SL S + D L LK
Sbjct: 99 PLGVFDHLTQLDKLYLGGN-----------QLKSLPS-GVFD------------RLTKLK 134
Query: 248 DLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
+L L + +IP+G +L NLQTL LS N L +P F + L + L N
Sbjct: 135 ELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 220 ASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFN 278
A E L + + S L L L+L + T+ +G+ +L L TL L+ N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANN 93
Query: 279 NLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHLS 327
L +P +F ++ L+ L+LG N L +LP+ + L+ + L+ N L
Sbjct: 94 QLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ 144
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 8e-07
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNLVRLYGC 707
+LG GG+G V + G +A+KQ + ++ EI + + H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR-E 79
Query: 708 CIEGARRLLVYDG-YLAPEYAMRGHL 732
+G ++L D LA EY G L
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDL 105
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 9e-07
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQ--LSIASHQGKNQFVNEIATISAVQHRN 700
+ + ++G GG V++ ++ A+K L A +Q + + NEIA ++ +Q +
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 701 L--VRLYGC 707
+RLY
Sbjct: 116 DKIIRLYDY 124
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 26/178 (14%), Positives = 52/178 (29%), Gaps = 20/178 (11%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVK-----QLSIASHQ 681
+ F L K + +G+G YG V + A+K ++ + +
Sbjct: 11 RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSF 741
+ E+ + + H N+ RLY E + + L E GHL
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYE-VYEDEQYI-----CLVMELCHGGHL--------L 116
Query: 742 GVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 799
+ + + + +I N G + +K ++
Sbjct: 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLV 702
F P + LG G G + + D R +AVK++ ++ E+ + +H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 703 RLYGCCIEGARRLLVYDGYLAPEY 726
R + C + + Y+A E
Sbjct: 82 RYF-CTEKDRQFQ-----YIAIEL 99
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGC 707
L EGG+ VY+ + GR A+K+L + + E+ + + H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 708 CIEGARRLL--VYDGYLAPEYAMRGHL 732
G + L E +G L
Sbjct: 95 ASIGKEESDTGQAEFLLLTELC-KGQL 120
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 1e-06
Identities = 42/289 (14%), Positives = 81/289 (28%), Gaps = 32/289 (11%)
Query: 52 CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGP-LPSFIGNLSRLTLLSLAH- 109
++ L++ + + +L+ L F + + L + N L + +
Sbjct: 174 SSFSEKDGKWLHE---LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDF 230
Query: 110 -NVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTF 168
+ + NL+E SL + + KL L + G + +P F
Sbjct: 231 EILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNE-MPILF 289
Query: 169 AKLHNMQILRASDAHF-TGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRI 227
++ L A T I L L + + L+ LRI
Sbjct: 290 PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRI 349
Query: 228 SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ---- 283
+ + L AL G Q L+ + + +++T +
Sbjct: 350 E---RGADEQGMEDEEGLVSQRGLI-ALAQG--------CQELEYMAVYVSDITNESLES 397
Query: 284 IPRTLFNIDSLNYLFLGNNSLSGTLPT--------QKSENLQNIDLSYN 324
I L N+ + L LP + L+
Sbjct: 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLR 446
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 46/309 (14%), Positives = 92/309 (29%), Gaps = 41/309 (13%)
Query: 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGP--LPSFIGNLSRLTLLSLAHN 110
++ + +LN+ +PE+ + L + L + GP +P +++ L L +
Sbjct: 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYA 303
Query: 111 VFSGPVPREL-GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFA 169
+ L L +L N L +L+ L I+ +
Sbjct: 304 LLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEG 363
Query: 170 KL------------HNMQILRASDAHFTGK-IPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
+ ++ + + T + + L RL + I
Sbjct: 364 LVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLP 423
Query: 217 SK------LASLESLRISDIYFVSSSLD------FVMSLKNLKDLSLRNALITGTIPSGI 264
L + LR Y L N++ + L + G+
Sbjct: 424 LDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE---GL 480
Query: 265 GEL----QNLQTLDLSFNNLTGQ-IPRTLFNIDSLNYLFLGNNSLSGTLPT-----QKSE 314
E NLQ L++ + + I + + SL YL++ S T +
Sbjct: 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW 540
Query: 315 NLQNIDLSY 323
N++ I
Sbjct: 541 NIELIPSRR 549
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 22/123 (17%)
Query: 626 IESKPNTFSY----------AELRSATKDFDPSNKLGEGGYGPVYKGTLSD------GRV 669
+ S PNTF + E + +K + LGEG + VY+ T D +
Sbjct: 38 VSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQK 97
Query: 670 IAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMR 729
+K A+ + + ++ Y + +LV E
Sbjct: 98 FVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG------ELYSY 151
Query: 730 GHL 732
G L
Sbjct: 152 GTL 154
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQ 697
++ + S+ LG+G V++G G + A+K + S + + E + +
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 698 HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
H+N+V+L+ E L E+ G L
Sbjct: 66 HKNIVKLFA-IEEETTTRHK---VLIMEFCPCGSL 96
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 19/124 (15%)
Query: 626 IESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQG 682
+++ P F ++ ++ + KLG G YG V A+K + S
Sbjct: 20 LQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS 79
Query: 683 KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEY----------AMRGHL 732
++ + E+A + + H N+++LY E R YL E R
Sbjct: 80 NSKLLEEVAVLKLLDHPNIMKLYDFF-EDKRNY-----YLVMECYKGGELFDEIIHRMKF 133
Query: 733 TEKA 736
E
Sbjct: 134 NEVD 137
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 20/125 (16%)
Query: 626 IESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQ 681
+ + P F + + LG+G +G V G+ AVK +S +
Sbjct: 9 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT 68
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEY----------AMRGH 731
K + E+ + + H N+++LY E YL E R
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFF-EDKGYF-----YLVGEVYTGGELFDEIISRKR 122
Query: 732 LTEKA 736
+E
Sbjct: 123 FSEVD 127
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ--FVNEIATISAVQH 698
+ ++ LG+G +G V K + AVK ++ AS + K+ + E+ + + H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEK 735
N+++L+ E + Y+ E R +E
Sbjct: 81 PNIMKLFEIL-EDSSSF-----YIVGELYTGGELFDEIIKRKRFSEH 121
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 49/291 (16%), Positives = 84/291 (28%), Gaps = 63/291 (21%)
Query: 96 IGNLSRLTLLSLAHNVFSG----PVPRELGNLKELNLLSLANNNFSG----ALPPEIGNL 147
+ S + SL + + V L + + L+ N L I +
Sbjct: 1 MARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 148 AKLEELYIDSCGAS---GEIPSTFAKL-------HNMQILRASDAHFTGK----IPDFIG 193
LE EIP L + +R SD F + DF+
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 194 NWTKLTALRLQGNSF-------------QGPIPSSLSKLASLESLRISD-------IYFV 233
T L L L N + + L S+ +
Sbjct: 120 KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 234 SSSLDFVMSLKNLKDLSLR-NAL----ITGTIPSGIGELQNLQTLDLSFNNLTGQ----I 284
+ + S + L + + N + I + G+ Q L+ LDL N T +
Sbjct: 180 AKTF---QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 236
Query: 285 PRTLFNIDSLNYLFLGNN--------SLSGTLPTQKSENLQNIDLSYNHLS 327
L + +L L L + ++ ++ LQ + L YN +
Sbjct: 237 AIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 4e-06
Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 20/208 (9%)
Query: 92 LPSFIGNLSRLTLLSLAHNVFS----GPVPRELGNLKELNLLSLANNNFSGALPPEIG-N 146
+ + + + L + L V + + + N K L L S FS I
Sbjct: 97 IEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSS--CEGFSTDGLAAIAAT 154
Query: 147 LAKLEELYIDSCGASGEIPSTFAKL----HNMQILRASD--AHFTGK-IPDFIGNWTKLT 199
L+EL + + ++ L S + + + + L
Sbjct: 155 CRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLK 214
Query: 200 ALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVM------SLKNLKDLSLRN 253
+L+L + + L + LE L + K L+ LS
Sbjct: 215 SLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFW 274
Query: 254 ALITGTIPSGIGELQNLQTLDLSFNNLT 281
+ +P+ L TL+LS+ +
Sbjct: 275 DAVPAYLPAVYSVCSRLTTLNLSYATVQ 302
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 52/277 (18%), Positives = 93/277 (33%), Gaps = 31/277 (11%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAH-NVFSGPVPRELGNLKEL 126
+ L + L L + LP+ SRLT L+L++ V S + + L +L
Sbjct: 257 LSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKL 316
Query: 127 NLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPST----------FAKLHNMQI 176
L + + L L EL + P+ ++
Sbjct: 317 QRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES 376
Query: 177 LRASDAHFTGK-IPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235
+ T + N +T RL + P +L DI F +
Sbjct: 377 VLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAP---------DYLTLEPLDIGFGA- 426
Query: 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGE-LQNLQTLDLSFNNLTGQ-IPRTLFNIDS 293
V K+L+ LSL L+T + IG + ++ L ++F + + L DS
Sbjct: 427 ---IVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482
Query: 294 LNYLFLGNNSLS---GTLPTQKSENLQNIDLSYNHLS 327
L L + + K E ++++ +S +S
Sbjct: 483 LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQ 697
++ + S+ LG+G V++G G + A+K + S + + E + +
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 698 HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
H+N+V+L+ E R L E+ G L
Sbjct: 66 HKNIVKLFAIEEETTTRHK----VLIMEFCPCGSL 96
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 19/108 (17%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN--QFVNEIATISAVQH 698
+ ++ LG+G +G V K + AVK ++ AS + K+ + E+ + + H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEY----------AMRGHLTEKA 736
N+++L+ E + Y+ E R +E
Sbjct: 81 PNIMKLFEIL-EDSSSF-----YIVGELYTGGELFDEIIKRKRFSEHD 122
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL-RNALIT 257
T L L GN F +P LS L + +S+ + S ++ L L L N L
Sbjct: 34 TELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL-- 90
Query: 258 GTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
IP L++L+ L L N+++ +P F ++ +L++L +G N
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 6e-06
Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 17/106 (16%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
K F LG G + V+ G++ A+K + + + NEIA + ++H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEKA 736
+V L E YL + RG TEK
Sbjct: 68 IVTLED-IYESTTHY-----YLVMQLVSGGELFDRILERGVYTEKD 107
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 10/86 (11%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNL 701
LG G G V GR +AVK++ I + EI ++ H N+
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNV 71
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYA 727
+R Y C R L Y+A E
Sbjct: 72 IRYY-CSETTDRFL-----YIALELC 91
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 6e-06
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 21/99 (21%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS-------- 679
P FS+ T+ K+GEG +G V++ V A+K ++I
Sbjct: 8 KGPVPFSHC---LPTEKLQRCEKIGEGVFGEVFQTIADHTPV-AIKIIAIEGPDLVNGSH 63
Query: 680 HQGKNQFVNEIATISAVQ---------HRNLVRLYGCCI 709
+ + + EI + + L
Sbjct: 64 QKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 626 IESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN 684
+ + ++ +K ++ K+G+G +G V+K G+ +A+K++ + K
Sbjct: 1 MAKQYDSVECPFCDEVSK-YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM--ENEKE 57
Query: 685 QF----VNEIATISAVQHRNLVRLYGCCIEGARRLLVYDG--YLAPEYA---MRGHLTEK 735
F + EI + ++H N+V L C A G YL ++ + G L+
Sbjct: 58 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 117
Query: 736 ADVFSFGVV 744
F+ +
Sbjct: 118 LVKFTLSEI 126
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 9e-06
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI-ASHQGKNQFVNEIATI-SAVQHRN 700
D ++G G YG V K G+++AVK++ + + Q + ++ + +
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 701 LVRLYGCCIEG 711
+V+ YG
Sbjct: 83 IVQFYGALFRE 93
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 9e-06
Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 43/156 (27%)
Query: 612 RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSN---------KLGEGGYGPVYKG 662
RR +N+ E L S+ F + +L + P LG G G V
Sbjct: 97 RRPLNNNSEIALS--LSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLA 154
Query: 663 T-LSDGRVIAVK-----QLSIASHQGKN---QFVNEIATISAVQHRNLVRLYGCCIEGAR 713
+ +A++ + +I S + + EI + + H ++++
Sbjct: 155 FERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKN------- 207
Query: 714 RLLVYDG---YLAPEYA----------MRGHLTEKA 736
+D Y+ E L E
Sbjct: 208 ---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT 240
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 17/105 (16%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
+ + N +G G +G V A K++ + ++F EI + ++ H N
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEK 735
++RLY E + YL E + E
Sbjct: 68 IIRLYE-TFEDNTDI-----YLVMELCTGGELFERVVHKRVFRES 106
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 103/694 (14%), Positives = 195/694 (28%), Gaps = 254/694 (36%)
Query: 184 FTGKI--PDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASL-ESLRISDIYFVSSSLDFV 240
F ++ ++ + ++ ++ + + + L ++ Y VS L
Sbjct: 82 FVEEVLRINY--KFL-MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR-LQPY 137
Query: 241 MSLKN-LKDL-SLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLF 298
+ L+ L +L +N LI G G G+ + + ++ +F +L
Sbjct: 138 LKLRQALLELRPAKNVLIDG--VLGSGK-TWVALDVCLSYKVQCKMDFKIF------WLN 188
Query: 299 LGN-NSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVF 357
L N NS L E LQ + + + S S + L ++ S+
Sbjct: 189 LKNCNSPETVL-----EMLQKL---LYQIDPNWTSRSDHSSNIKLRIH---------SIQ 231
Query: 358 PGLQCL--QRNFP---------CNRNAPRYANFSIKCGGPQM----RADNIVYEADNSSL 402
L+ L + + N A F++ C ++ R + D L
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNA--FNLSC---KILLTTRFKQV---TD--FL 281
Query: 403 SASSYVVTSTEKWAVSNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYG 462
SA++ S + +++ E V + L + R +L P +
Sbjct: 282 SAATTTHISLDHHSMT----LTPDE----VKSLLLKYLDCRPQDL-------PREV---- 322
Query: 463 LGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRA 522
L P ++S+ AE + W+ WK + K
Sbjct: 323 --LTTNPRRLSI-IAE--SIRDGLATWD---------------NWKHVNCDKL-----TT 357
Query: 523 IIKNFNAAVSENHLEIHLLWAGKGTCCVPTQGDYGPAISALSAVSAFKPSVSGLPPGTPG 582
II+ S N LE P +Y L +V PP
Sbjct: 358 IIE-----SSLNVLE-------------PA--EYRKMFDRL-SV---------FPPSAH- 386
Query: 583 NKNHTGMIVGIAVPLGILGLIVISIVFYMRRKKDNDDEEVLVGIESKPNTFSYAELRSAT 642
+P +L L +D V+ + S E
Sbjct: 387 ------------IPTILLSL-------IWFDVIKSDVMVVVNKLHKY----SLVE----- 418
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K S ++ L + + + HR++V
Sbjct: 419 KQPKES----------TI--SIPSI------YLELKVK------LENEYAL----HRSIV 450
Query: 703 RLYG--CCIEGARRLLVY-DGYLAPEYAMRGHL-----TEKADVFSFGVVALEVISGRAN 754
Y + + Y D Y + HL E+ +F
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFY-SHIGH-HLKNIEHPERMTLFR-------------- 494
Query: 755 SDNSLDTEKIYL-LEW----------AWNLHENNQSLGLVDPTLTEF---------NDKE 794
++L + AWN + G + TL + ND +
Sbjct: 495 --------MVFLDFRFLEQKIRHDSTAWN------ASGSILNTLQQLKFYKPYICDNDPK 540
Query: 795 ALRVIGVAL--LCTQASPMMRPPMSRVV--AMLA 824
R++ L L ++ + ++ A++A
Sbjct: 541 YERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 61/428 (14%), Positives = 124/428 (28%), Gaps = 149/428 (34%)
Query: 35 DNNPAIVCDC----TFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTG 90
N V + F+ C I L+T + +
Sbjct: 251 LN----VQNAKAWNAFNLS--CKI-----------------LLTTR-------FKQVTD- 279
Query: 91 PLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150
F+ + T +SL H+ P E+ +LL + LP E+
Sbjct: 280 ----FLSAATT-THISLDHHS-MTLTPDEV-----KSLLLKYLDCRPQDLPREV---LTT 325
Query: 151 EELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
+ S + + NW + +
Sbjct: 326 NPRRLSIIAES---------IRDG--------------LATWDNW-----KHVNCDKLTT 357
Query: 211 PIPSSLSKLASLE-------------SLRIS----DIYFVSSSLDFVMS-LKNLKDLSL- 251
I SSL+ L E S I + + VM + L SL
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 252 --RNALITGTIPSGIGELQNLQTLDLSFNNLTG---------QIPRTLFNIDSL-----N 295
+ T +IPS + L + N IP+T + D +
Sbjct: 418 EKQPKESTISIPS----IY--LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 296 YLF--LGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSN 353
Y + +G++ L ++ + + L + ++ ++ ++ T ++
Sbjct: 472 YFYSHIGHH-LKNIEHPERMTLFRMVFLDFR--------FLEQKIR-----HDSTAWNAS 517
Query: 354 ISVFPGLQCLQ--RNFPCNRNAPRYA-------NFSIKCGGPQMRAD--NIVYEA---DN 399
S+ LQ L+ + + C N P+Y +F K + + +++ A ++
Sbjct: 518 GSILNTLQQLKFYKPYIC-DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAED 576
Query: 400 SSLSASSY 407
++ ++
Sbjct: 577 EAIFEEAH 584
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSI-ASHQGKNQFVNEIATISAVQHRN 700
DF+ ++LG G G V+K + G V+A K + + +NQ + E+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 701 LVRLYGC 707
+V YG
Sbjct: 93 IVGFYGA 99
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVN-----EI 690
+++S K ++ + LGEG + VYK + +++A+K++ + +N EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 691 ATISAVQHRNLVRLYGCCIEGARRLLVYDGYL 722
+ + H N++ L + LV+D ++
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFD-FM 94
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCC 708
LGEG + V L + AVK + +++ E+ + Q HRN++ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 709 IEGARRLLVYD----GYLAPEYAMRGHLTEKA 736
E R LV++ G + R H E
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI-ASHQGKNQFVNEIATI-SAVQHRN 700
D +P +LG G YG V K + G+++AVK++ + Q + + + ++ V
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67
Query: 701 LVRLYGC 707
V YG
Sbjct: 68 TVTFYGA 74
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 30/149 (20%)
Query: 612 RRKKDNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVI 670
+ GI P + + + + KLG G YG V +
Sbjct: 5 HHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK 64
Query: 671 AVKQLS-------------IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717
A+K + + + NEI+ + ++ H N+++L+ E +
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF-EDKKYF-- 121
Query: 718 YDGYLAPEY----------AMRGHLTEKA 736
YL E+ R E
Sbjct: 122 ---YLVTEFYEGGELFEQIINRHKFDECD 147
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 639 RSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQF----VNEIATIS 694
+ + + K+GEG YG VYK S GR++A+K+ I + EI+ +
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKR--IRLDAEDEGIPSTAIREISLLK 74
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYD 719
+ H N+V L LV++
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFE 99
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 19/108 (17%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ--FVNEIATISAVQH 698
+ ++D +LG+G + V + + G A K ++ ++ E +QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEKA 736
N+VRL+ I+ YL + R +E
Sbjct: 65 PNIVRLHD-SIQEESFH-----YLVFDLVTGGELFEDIVAREFYSEAD 106
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 23/112 (20%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV------NEIATIS 694
+D +LG G + V K S G A K + + + V E++ +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEKA 736
V H N++ L+ E + L E + L+E+
Sbjct: 71 QVLHPNIITLHD-VYENRTDV-----VLILELVSGGELFDFLAQKESLSEEE 116
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 10/75 (13%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 642 TKDFDPSNKLGEG--GYGPVYKGT-LSDGRVIAVKQLSIASHQGK--NQFVNEIATISAV 696
++ +G+G V G + V+++++ + + E+
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83
Query: 697 QHRNLVRLYGCCIEG 711
H N+V I
Sbjct: 84 NHPNIVPYRATFIAD 98
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 23/112 (20%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV------NEIATIS 694
+D +LG G + V K S G A K + + + V E++ +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEKA 736
V H N++ L+ E + L E + L+E+
Sbjct: 71 QVLHHNVITLHD-VYENRTDV-----VLILELVSGGELFDFLAQKESLSEEE 116
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 19/122 (15%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ- 685
+ + F + ++D +LG+G + V + + G A K ++ ++
Sbjct: 14 GRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ 73
Query: 686 -FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTE 734
E +QH N+VRL+ I+ YL + R +E
Sbjct: 74 KLEREARICRKLQHPNIVRLHD-SIQEESFH-----YLVFDLVTGGELFEDIVAREFYSE 127
Query: 735 KA 736
Sbjct: 128 AD 129
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
+ + + LG G +G V++ S + K + + + EI+ ++ +HRN
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRN 62
Query: 701 LVRLYG 706
++ L+
Sbjct: 63 ILHLHE 68
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 4e-05
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 31/116 (26%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV------NEIATIS 694
++ +LG G + V K G+ A K + + V E+ +
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYDG----YLAPEYAM----------RGHLTEKA 736
++H N++ L+ +++ L E + LTE
Sbjct: 64 EIRHPNIITLHD----------IFENKTDVVLILELVSGGELFDFLAEKESLTEDE 109
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV-NEIATISAVQHR 699
F KLG G +G V+ S G +K ++ Q + + EI + ++ H
Sbjct: 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 700 NLVRLYG 706
N+++++
Sbjct: 81 NIIKIFE 87
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 41/166 (24%), Positives = 60/166 (36%), Gaps = 31/166 (18%)
Query: 139 ALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKL 198
++P I + LY+ + P F L N++ L + T+L
Sbjct: 33 SVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSL-RNALIT 257
T L L N +L L S + D L +LK+L + N L
Sbjct: 91 TVLDLGTN-----------QLTVLPS-AVFD------------RLVHLKELFMCCNKL-- 124
Query: 258 GTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNN 302
+P GI L +L L L N L IP F + SL + +L N
Sbjct: 125 TELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGN 169
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 625 GIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI-ASHQG 682
G ++ T ++ D + ++G G G V+K G VIAVKQ+ + +
Sbjct: 7 GKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE 66
Query: 683 KNQFVNEIATI-SAVQHRNLVRLYGCCIEG 711
+ + ++ + + +V+ +G I
Sbjct: 67 NKRILMDLDVVLKSHDCPYIVQCFGTFITN 96
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 6e-05
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVN-----EIATI 693
S++ F KLG G Y VYKG + G +A+K++ + S +G EI+ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----TPSTAIREISLM 57
Query: 694 SAVQHRNLVRLYGCCIEGARRLLVYDGYL 722
++H N+VRLY + LV++ ++
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFE-FM 85
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 7e-05
Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 31/116 (26%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV------NEIATIS 694
+D +LG G + V K S G A K + + + V E++ +
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYDG----YLAPEYAM----------RGHLTEKA 736
+QH N++ L+ VY+ L E + LTE+
Sbjct: 70 EIQHPNVITLHE----------VYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 7e-05
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQF----VNEIATISAVQH 698
+ + K+GEG YG VYK + G A+K+ I + + EI+ + ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKK--IRLEKEDEGIPSTTIREISILKELKH 59
Query: 699 RNLVRLYGCCIEGARRLLVYD 719
N+V+LY R +LV++
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFE 80
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 18/122 (14%), Positives = 32/122 (26%), Gaps = 34/122 (27%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS--------IASHQGKNQFVNEIAT 692
++ S LG G G V + +A+K +S EI
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 693 ISAVQHRNLVRLYGCCIEGARRLLVYDG---YLAPEYA----------MRGHLTEK--AD 737
+ + H ++++ +D Y+ E L E
Sbjct: 69 LKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 738 VF 739
F
Sbjct: 119 YF 120
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 220 ASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFN 278
A L + S L +L L L + ++P+G+ +L +L L+LS N
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTN 86
Query: 279 NLTGQIPRTLFNIDSL---NYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHL 326
L +P +F D L L L N L +LP K L+++ L N L
Sbjct: 87 QLQ-SLPNGVF--DKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF----VNEIATISAVQ 697
++F K+GEG YG VYK G V+A+K+ I + EI+ + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKK--IRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 650 KLGEGGYGPVYKG---TLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
K+G G YG VYK D + A+KQ+ EIA + ++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQK 85
Query: 707 CCIEGARRLLVYDGYLAPEYA 727
+ A R + +L +YA
Sbjct: 86 VFLSHADRKV----WLLFDYA 102
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVN-----EIAT- 692
AT ++P ++G G YG VYK G +A+K + + + G + E+A
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 693 --ISAVQHRNLVRLY 705
+ A +H N+VRL
Sbjct: 66 RRLEAFEHPNVVRLM 80
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 19/108 (17%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQH 698
T+++ +LG+G + V + + G+ A ++ S + + E ++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEKA 736
N+VRL+ I YL + R + +E
Sbjct: 70 PNIVRLHD-SISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEAD 111
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 1e-04
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF----VNEIATISAVQ 697
+ ++ K+GEG YG V+K ++A+K+ + + EI + ++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKR--VRLDDDDEGVPSSALREICLLKELK 59
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H+N+VRL+ + LV++
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFE 81
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 24/106 (22%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLS-----------------IASHQGKNQF 686
D+ L +G + + D + A+K+ I+ + F
Sbjct: 32 DYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 687 VNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
NE+ I+ +++ + G I + Y+ EY +
Sbjct: 91 KNELQIITDIKNEYCLTCEG-IITNYDEV-----YIIYEYMENDSI 130
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 6/76 (7%), Positives = 19/76 (25%), Gaps = 4/76 (5%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN---QFVNEIAT 692
L + L G V+ + A+K ++ + ++ +
Sbjct: 56 LLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFA 115
Query: 693 ISAVQHRNLVRLYGCC 708
+ + +
Sbjct: 116 AARLLGESPEEARDRR 131
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 627 ESKPNTFSYAELRSATK--DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK 683
P + S + SAT + KLGEG YG VYK +A+K++ + +
Sbjct: 16 TQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL--EHEE 73
Query: 684 NQF----VNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYL 722
+ E++ + +QHRN++ L R L+++ Y
Sbjct: 74 EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE-YA 115
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN-QFVNEIATISAVQHRN 700
+ + +KLGEG Y VYKG ++A+K++ + +G + E++ + ++H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 701 LVRLYGCCIEGARRLLVYDGYL 722
+V L+ LV++ YL
Sbjct: 62 IVTLHDIIHTEKSLTLVFE-YL 82
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVK-----QLSIASHQGKNQFVNEIATISA 695
++ +G+G + V + G+ AVK + + + E +
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 696 VQHRNLVRLYG 706
++H ++V L
Sbjct: 83 LKHPHIVELLE 93
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
+ F+ ++LG G VY+ + A+K + K EI + + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALK--VLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYA----------MRGHLTEK 735
+++L E + L E +G+ +E+
Sbjct: 110 IIKLKEIF-ETPTEI-----SLVLELVTGGELFDRIVEKGYYSER 148
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATI-SAVQHR 699
T ++ +G G Y + + AVK + + EI + QH
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT----EEIEILLRYGQHP 76
Query: 700 NLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEKA 736
N++ L +G +V + G L + + +E+
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE 117
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 33/132 (25%)
Query: 199 TALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITG 258
T L L N +L + S + L +L L L+ +T
Sbjct: 32 TELLLNDN-----------ELGRISSDGLFG------------RLPHLVKLELKRNQLT- 67
Query: 259 TIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFN-IDSLNYLFLGNNSLS----GTLPTQK 312
I ++Q L L N + +I +F + L L L +N +S G+
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN 126
Query: 313 SENLQNIDLSYN 324
S L +++L+ N
Sbjct: 127 S--LTSLNLASN 136
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 8e-04
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQL----------SIASHQGKNQFVNEIAT 692
++ +GEG YG V K GR++A+K+ IA + EI
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--------MREIKL 77
Query: 693 ISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ ++H NLV L C + R LV++
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFE 104
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 905 | ||||
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-18 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-10 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-21 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-10 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-08 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-06 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-21 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-13 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 7e-21 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 8e-20 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-19 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-10 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-19 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-19 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-15 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-18 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-14 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 9e-14 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-07 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-18 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-07 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-18 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-18 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-04 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-18 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-11 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-17 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-08 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-16 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.004 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-16 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-09 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-16 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-08 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-16 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-04 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-16 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-09 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 7e-16 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-04 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-15 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-13 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-15 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-06 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-15 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 6e-12 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-15 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-10 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-15 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-15 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 0.003 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-15 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 9e-13 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-15 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-15 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-06 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-15 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-07 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 9e-15 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-14 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-04 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-14 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-11 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-14 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-13 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-14 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-07 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-14 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-08 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-14 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 5e-12 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 3e-14 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-14 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-08 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-14 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-14 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 8e-14 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-05 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 8e-14 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 0.002 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 9e-14 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 9e-09 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-13 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 3e-13 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 4e-13 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 0.002 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 5e-13 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-13 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-12 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 0.001 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-12 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-12 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 5e-12 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-12 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-11 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-11 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 0.004 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-11 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-11 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-11 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 7e-11 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-04 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-10 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-10 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-08 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 9e-10 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-07 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-05 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-08 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 0.003 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.002 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 5e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 9e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 4e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 3e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.002 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.001 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 6e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 7e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 |
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 98.2 bits (243), Expect = 6e-23
Identities = 63/310 (20%), Positives = 103/310 (33%), Gaps = 56/310 (18%)
Query: 42 CDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSR 101
C C C L +P++L L + N T NL
Sbjct: 8 CQCHLR-VVQCSDLGLEK--------VPKDLPP--DTALLDLQNNKITEIKDGDFKNLKN 56
Query: 102 LTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIG---------------- 145
L L L +N S P L +L L L+ N LP ++
Sbjct: 57 LHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKV 115
Query: 146 --------NLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTK 197
N + EL + +SG F + + +R +D + T IP G
Sbjct: 116 RKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPS 172
Query: 198 LTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALIT 257
LT L L GN +SL L +L L +S + + + +L++L L N +
Sbjct: 173 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 232
Query: 258 GTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQ 317
+P G+ + + +Q + L NN++ +G+N K +
Sbjct: 233 -KVPGGLADHKYIQVVYLHNNNISA----------------IGSNDFCPPGYNTKKASYS 275
Query: 318 NIDLSYNHLS 327
+ L N +
Sbjct: 276 GVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.1 bits (209), Expect = 2e-18
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 10/256 (3%)
Query: 116 VPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQ 175
VP++L + LL L NN + + NL L L + + S P FA L ++
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 176 ILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235
L S +L + + + + L+++ +E L + +
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGI 141
Query: 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN 295
+K L + + + IT TIP G+ +L L L N +T +L +++L
Sbjct: 142 ENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 296 YLFLGNNSLSGTLPT--QKSENLQNIDLSYNHL-SGPFPSWVTSSLQ-MNLAVNNFTFDG 351
L L NS+S + +L+ + L+ N L P +Q + L NN + G
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIG 258
Query: 352 SNISVFPGLQCLQRNF 367
SN PG + ++
Sbjct: 259 SNDFCPPGYNTKKASY 274
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (147), Expect = 1e-10
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
+ L L+N IT L+NL TL L N ++ P + L L+L N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 304 LSGTLPTQKSENLQNIDLSYNHLSGPFPS---WVTSSLQMNLAVNNFTFDGSNISVFPGL 360
L LP + + LQ + + N ++ S + + + L N G F G+
Sbjct: 91 LK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 361 QCLQRNFPCNRN 372
+ L + N
Sbjct: 150 KKLSYIRIADTN 161
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 95.8 bits (237), Expect = 1e-21
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 14/204 (6%)
Query: 121 GNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
L L L NN S P I L+EL ++ T A L N+ L +
Sbjct: 194 AKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
+ + P + TKLT L+L N P + + L + + + +
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDI----SPI 303
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
+LKNL L+L I+ P + L LQ L + N ++ +L N+ ++N+L G
Sbjct: 304 SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAG 359
Query: 301 NNSLSGTLPTQKSENLQNIDLSYN 324
+N +S P + + L+
Sbjct: 360 HNQISDLTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 78.9 bits (193), Expect = 4e-16
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 28/192 (14%)
Query: 168 FAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRI 227
AKL N++ L A++ + P I T L L L GN + +L+ L +L L +
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 248
Query: 228 SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP--------------------SGIGEL 267
++ S+L + L L +L L I+ P S I L
Sbjct: 249 ANNQI--SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL 306
Query: 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
+NL L L FNN++ P + ++ L LF NN +S N+ + +N +S
Sbjct: 307 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQIS 364
Query: 328 GPFPSWVTSSLQ 339
P + +
Sbjct: 365 DLTPLANLTRIT 376
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 64.6 bits (156), Expect = 2e-11
Identities = 60/303 (19%), Positives = 104/303 (34%), Gaps = 25/303 (8%)
Query: 75 LQYLTFLKIDRNFFTGPLP-SFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN 133
L + + T + + + ++ L L G + L L ++ +N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 75
Query: 134 NNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIG 193
N + + NL KL ++ +++ + P L + + +
Sbjct: 76 NQLTD--ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 194 NWTK---------LTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVM--- 241
++AL + Q + ++ L L +L + +SS+ +
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193
Query: 242 -SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300
L NL+ L N I+ P GI NL L L+ N L TL ++ +L L L
Sbjct: 194 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 301 NNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
NN +S P L + L N +S P ++L N D S IS L
Sbjct: 250 NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL 309
Query: 361 QCL 363
L
Sbjct: 310 TYL 312
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 64.3 bits (155), Expect = 3e-11
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
L+ LT+L + N + P + +L++L L A+N S L NL +N LS +N
Sbjct: 306 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHN 361
Query: 135 NFSGALPPEIGNLAKLEELYIDS 157
S + NL ++ +L ++
Sbjct: 362 QISD--LTPLANLTRITQLGLND 382
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 59.2 bits (142), Expect = 9e-10
Identities = 47/287 (16%), Positives = 89/287 (31%), Gaps = 26/287 (9%)
Query: 98 NLSRLTLLSLAHNVFSGPVP-RELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156
L+ L + V +L + L L + G + L L ++
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFS 74
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHF------------TGKIPDFIGNWTKLTALRLQ 204
+ + P L + + ++ TG L
Sbjct: 75 NNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 132
Query: 205 GNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALI-TGTIPSG 263
+ +++S +++L L + + + L NL L + + S
Sbjct: 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192
Query: 264 IGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSY 323
+ +L NL++L + N ++ P + +L+ L L N L NL ++DL+
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKDIGTLASLTNLTDLDLAN 250
Query: 324 NHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCLQRNFPCN 370
N +S P + L L + IS GL L
Sbjct: 251 NQISNLAPLSGLTKLT-ELKLGANQISN--ISPLAGLTALTNLELNE 294
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 53.9 bits (128), Expect = 5e-08
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 42 CDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSR 101
+ ++T L +Y N + P + +L L L N + S + NL+
Sbjct: 297 LEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTN 352
Query: 102 LTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
+ LS HN S P L NL + L L +
Sbjct: 353 INWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 2e-06
Identities = 51/274 (18%), Positives = 90/274 (32%), Gaps = 23/274 (8%)
Query: 122 NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASD 181
L E L N + + +L ++ L D G I L+N+ + S+
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSN 75
Query: 182 AHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLES---------------LR 226
T P + N TKL + + N P + + +
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 227 ISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPR 286
++ + S+++ + +L L L + T + L L+ LD+S N
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK--VSDIS 191
Query: 287 TLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNN 346
L + +L L NN +S P NL + L+ N L ++L NN
Sbjct: 192 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANN 251
Query: 347 FTFDGSNISVFPGLQCLQRNFPCNRNAPRYANFS 380
+ + +S L L+ N A +
Sbjct: 252 QISNLAPLSGLTKLTELKLGANQISNISPLAGLT 285
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.8 bits (230), Expect = 2e-21
Identities = 44/244 (18%), Positives = 78/244 (31%), Gaps = 37/244 (15%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
+ ++G G +G V+ G + +A+K + + F+ E + + H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 703 RLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEKADVFSFGVVALE---------VI 749
+LYG C+E A LV++ G L+ + L + + E VI
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 750 SGRANSDNSLDTEK--IYLLEWAWNLHENNQ----------SLGLVDP------TLTEFN 791
+ N L E I + ++ + + P + +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 792 DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYLTDWDFKDITASF 851
D + V+ + P S VV DI G + KP + I
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST-HVYQIMNHC 238
Query: 852 LNED 855
E
Sbjct: 239 WKER 242
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.8 bits (165), Expect = 5e-13
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 14/111 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S + ++ + +
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV--------EDISTG 218
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 219 FRLYKPRL------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.9 bits (225), Expect = 7e-21
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + +++F+ E + + H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+LYG C + ++ EY G L
Sbjct: 63 QLYGVCTKQRPIFIIT------EYMANGCL 86
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (138), Expect = 2e-09
Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ PE M + K+D+++FGV+ E+ S +
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH------------ 213
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ + +V + C RP +++ +
Sbjct: 214 --IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 88.7 bits (219), Expect = 8e-20
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 632 TFSYAELRSATKDFDPS---------NKLGEGGYGPVYKGTL----SDGRVIAVKQL-SI 677
F++ + A ++F +G G +G V G L +A+K L S
Sbjct: 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 65
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ + + F++E + + H N++ L G + +++ E+ G L
Sbjct: 66 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT------EFMENGSL 114
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 56.3 bits (135), Expect = 5e-09
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE T +DV+S+G+V EV+S + + + N E +
Sbjct: 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI------NAIEQDYR 251
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
L + + L C Q RP ++V L
Sbjct: 252 L--------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.0 bits (215), Expect = 2e-19
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
+ +LG G +G V+ G + +AVK L + F+ E + +QH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
RLY + Y+ EY G L +
Sbjct: 72 RLYAVVTQEPI-------YIITEYMENGSLVD 96
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.4 bits (146), Expect = 2e-10
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE G T K+DV+SFG++ E+++ + ++ NL
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-----QNLERG--- 226
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ +E +++ LC + P RP + ++L
Sbjct: 227 ---YRMVRPDNCPEELYQLM---RLCWKERPEDRPTFDYLRSVL 264
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (213), Expect = 5e-19
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 25/123 (20%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIA 671
DEE+L +LRS DP K+G+G G VY ++ G+ +A
Sbjct: 2 DEEIL------------EKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA 49
Query: 672 VKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGH 731
++Q+++ K +NEI + ++ N+V + G +V EY G
Sbjct: 50 IRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM------EYLAGGS 103
Query: 732 LTE 734
LT+
Sbjct: 104 LTD 106
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (112), Expect = 4e-06
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 13/100 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE R K D++S G++A+E+I G N +Y +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY----------LIAT 230
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRV 819
G + E + C R +
Sbjct: 231 NGTPELQNPEKLSAIFRDFL---NRCLDMDVEKRGSAKEL 267
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 86.0 bits (211), Expect = 9e-19
Identities = 78/307 (25%), Positives = 117/307 (38%), Gaps = 25/307 (8%)
Query: 5 DAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNK 64
+ + W + + C+ + ++CD + T + L + LN
Sbjct: 20 NPTTLSSWLPTTDCCNRTW--------------LGVLCD---TDTQTYRVNNLDLSGLNL 62
Query: 65 KGV--IPEELVTLQYLTFLKIDRN-FFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELG 121
IP L L YL FL I GP+P I L++L L + H SG +P L
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 122 NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHN-MQILRAS 180
+K L L + N SG LPP I +L L + D SG IP ++ + S
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240
TGKIP N + S + + + +
Sbjct: 183 RNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGL 242
Query: 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYL-FL 299
N DL N I GT+P G+ +L+ L +L++SFNNL G+IP N+ + +
Sbjct: 243 SKNLNGLDLR--NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYA 299
Query: 300 GNNSLSG 306
N L G
Sbjct: 300 NNKCLCG 306
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 75.2 bits (183), Expect = 4e-15
Identities = 57/265 (21%), Positives = 89/265 (33%), Gaps = 29/265 (10%)
Query: 97 GNLSRLTLLSLAHNVFSG--PVPRELGNLKELNLLSLANN-NFSGALPPEIGNLAKLEEL 153
R+ L L+ P+P L NL LN L + N G +PP I L +L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 154 YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIP 213
YI SG IP +++ + L S +G +P I + L + GN G IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 214 SSLSKLASLESLRISD-----------------------IYFVSSSLDFVMSLKNLKDLS 250
S + L + + +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 251 LRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
+G +NL LDL N + G +P+ L + L+ L + N+L G +P
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 311 QKS-ENLQNIDLSYNHL--SGPFPS 332
+ + + N P P+
Sbjct: 287 GGNLQRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 63.6 bits (153), Expect = 2e-11
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 83 IDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNF--SGAL 140
+ N G LP + L L L+++ N G +P + GNL+ ++ + ANN L
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPL 309
Query: 141 PP 142
P
Sbjct: 310 PA 311
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.9 bits (208), Expect = 1e-18
Identities = 56/259 (21%), Positives = 83/259 (32%), Gaps = 4/259 (1%)
Query: 92 LPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLE 151
+P I + L N S + L +L L +N + LA LE
Sbjct: 26 VPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 152 ELYIDSCGASGEI-PSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210
+L + + P+TF L + L P L L LQ N+ Q
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 211 PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNL 270
+ L +L L + S L +L L L + P +L L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 271 QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK-SENLQNIDLSYNHLSGP 329
TL L NNL+ L + +L YL L +N + LQ S + +
Sbjct: 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCS 263
Query: 330 FPSWVTSSLQMNLAVNNFT 348
P + LA N+
Sbjct: 264 LPQRLAGRDLKRLAANDLQ 282
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (174), Expect = 4e-14
Identities = 50/291 (17%), Positives = 80/291 (27%), Gaps = 37/291 (12%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLS 100
C C + T + + A +P + + + N + +
Sbjct: 5 ACVCYNEPKVTTSCPQQGLQA------VPVGIPA--ASQRIFLHGNRISHVPAASFRACR 56
Query: 101 RLTLLSLAHNVFSGPV-------------------------PRELGNLKELNLLSLANNN 135
LT+L L NV + P L L+ L L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 136 FSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNW 195
P LA L+ LY+ TF L N+ L +
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 196 TKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNAL 255
L L L N P + L L +L + + + + L+ L+ L L +
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236
Query: 256 ITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306
+ LQ S + + +P+ L D L N L G
Sbjct: 237 WVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKR---LAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (171), Expect = 9e-14
Identities = 46/270 (17%), Positives = 70/270 (25%), Gaps = 29/270 (10%)
Query: 13 NISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKGVIPEEL 72
IS P + S + +N D G + V P
Sbjct: 43 RISHVP-AASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF 101
Query: 73 VTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132
L L L +DR P L+ L L L N +L L L L
Sbjct: 102 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 161
Query: 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFI 192
N S L L+ L + + P F L + L + + + +
Sbjct: 162 GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL 221
Query: 193 GNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLR 252
L LRL N + L L+
Sbjct: 222 APLRALQYLRLNDNPWVCDCR-----ARPL--------------------WAWLQKFRGS 256
Query: 253 NALITGTIPSGIGELQNLQTLDLSFNNLTG 282
++ + ++P L L+ N+L G
Sbjct: 257 SSEVPCSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.1 bits (123), Expect = 1e-07
Identities = 38/174 (21%), Positives = 57/174 (32%), Gaps = 5/174 (2%)
Query: 163 EIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASL 222
+P Q + + LT L L N ++ + LA L
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 223 ESLRISDIYFVSSSLDFVMS-LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLT 281
E L +SD + S L L L L + P L LQ L L N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 282 GQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENLQNIDLSYNHLSGPFPSW 333
T ++ +L +LFL N +S + +L + L N ++ P
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA 196
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.1 bits (210), Expect = 2e-18
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 10/120 (8%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQG-KNQFVNEIATISA 695
+ DF+ ++LG G G V+K + G V+A K + + +NQ + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+V YG + + G L G + E+ V++ VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----VSIAVIKG 116
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (123), Expect = 2e-07
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
Y++PE H + ++D++S G+ +E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.2 bits (205), Expect = 5e-18
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G +AVK L + + + +F+
Sbjct: 4 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 62
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
E A + ++H NLV+L G C Y+ E+ G+L +
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLD 102
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.2 bits (140), Expect = 1e-09
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE + K+DV++FGV+ E+ + + +D ++Y L E +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ELLEKDYR 234
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ E + +V + C Q +P RP + +
Sbjct: 235 M--------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.5 bits (206), Expect = 6e-18
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN---QFVNEIATISAVQ 697
K F ++G G +G VY + + V+A+K++S + Q + E+ + ++
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 698 HRNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK 735
H N ++ GC + LV + + L E
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV 115
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.8 bits (95), Expect = 5e-04
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 17/104 (16%)
Query: 720 GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN 776
++APE + G K DV+S G+ +E+ + N +Y
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-------HIAQ 228
Query: 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVV 820
N+S L +E + C Q P RP ++
Sbjct: 229 NESPALQSGHWSE----YFRNFV---DSCLQKIPQDRPTSEVLL 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.4 bits (203), Expect = 7e-18
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ +G+G +G V G G +AVK + + F+ E + ++ ++H NLV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLV 63
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+L G +E L Y+ EY +G L +
Sbjct: 64 QLLGVIVEEKGGL-----YIVTEYMAKGSLVD 90
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 9e-11
Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE + K+DV+SFG++ E+ S + + + E
Sbjct: 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------PRVEKGYK 218
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ D + V C MRP ++ L
Sbjct: 219 MDAPDGCPPAVYE--------VMKNCWHLDAAMRPSFLQLREQL 254
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.8 bits (196), Expect = 5e-17
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G +AVK L ++ + + F+ E+ + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ HRNL+RLYG + +++ E A G L
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-------ELAPLGSL 97
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (128), Expect = 3e-08
Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 13/104 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE + +D + FGV E+ + L+ +I + + +
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL-----HKIDKEGER 233
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
L + + V + C P RP + L
Sbjct: 234 L--------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.3 bits (195), Expect = 1e-16
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 642 TKDFDPS------NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATIS 694
T+D +P +LG+G +G VYK + A K + S + ++ EI ++
Sbjct: 5 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 64
Query: 695 AVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+ H N+V+L ++ E+ G +
Sbjct: 65 SCDHPNIVKLLDAFYYENNLWILI------EFCAGGAVDA 98
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (88), Expect = 0.004
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 18/105 (17%)
Query: 720 GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLH 774
++APE M KADV+S G+ +E+ +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL-------KI 227
Query: 775 ENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRV 819
++ L P + C + + R S++
Sbjct: 228 AKSEPPTLAQP---SRWSSNFKDFL---KKCLEKNVDARWTTSQL 266
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.8 bits (191), Expect = 3e-16
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Query: 629 KPNT--FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQF 686
KP T + + KLG+G +G V+ GT + +A+K L F
Sbjct: 1 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAF 59
Query: 687 VNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ E + ++H LV+LY E Y+ EY +G L
Sbjct: 60 LQEAQVMKKLRHEKLVQLYAVVSEEPI-------YIVTEYMSKGSL 98
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 1e-09
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE A+ G T K+DV+SFG++ E+ + + ++
Sbjct: 179 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ------------ 226
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ + + + C + P RP + A L
Sbjct: 227 --VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.1 bits (189), Expect = 5e-16
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Query: 637 ELRSATKDFDPSN-KLGEGGYGPVYKGTL---SDGRVIAVKQLSIASHQG-KNQFVNEIA 691
+L + ++ +LG G +G V +G +A+K L + + + + E
Sbjct: 2 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61
Query: 692 TISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ + + +VRL G C + +LV E A G L
Sbjct: 62 IMHQLDNPYIVRLIGVC-QAEALMLVM------EMAGGGPL 95
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 2e-08
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE + ++DV+S+GV E +S + ++ E +
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM------AFIEQGKR 230
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ E + C RP V +
Sbjct: 231 MECPPECPPELYA--------LMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 78.2 bits (192), Expect = 5e-16
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
+D +LG G +G V++ + GRV K ++ K NEI+ ++ + H L+
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
L+ + +L+ E+ G L +
Sbjct: 90 NLHDAFEDKYEMVLIL------EFLSGGELFD 115
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 41.6 bits (97), Expect = 3e-04
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 27/165 (16%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRA--NSDNSLDT-EKIYLLEWAWNLHEN 776
+ APE R + D+++ GV+ ++SG + ++ L+T + + +W ++
Sbjct: 193 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 252
Query: 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM--LAGDIEVGTVIS 834
+ V P +F Q P R + + L GD +
Sbjct: 253 SS----VSPEAKDFIKN-----------LLQKEPRKRLTVHDALEHPWLKGDHS-----N 292
Query: 835 KPSYLTDWDFKDITASFLN--EDTPTPSSSIKRRKSKEKSQRENP 877
S + + I D P P +I R + ++ P
Sbjct: 293 LTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRP 337
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.5 bits (190), Expect = 6e-16
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 644 DFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQG-KNQFVNEIATISAV 696
LG G +G V + T +AVK L ++H + ++E+ +S +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 697 -QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
H N+V L G C G L++ EY G L
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVIT------EYCCYGDLLN 116
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 3e-09
Identities = 17/109 (15%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE T ++DV+S+G+ E+ S ++ + + + + +
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKFYKMIKEGFR 266
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828
+ + + + C A P+ RP ++V ++ I
Sbjct: 267 M--------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 77.8 bits (191), Expect = 7e-16
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
+D +LG G +G V++ T + G A K + K EI T+S ++H LV
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 86
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
L+ + +++Y E+ G L EK
Sbjct: 87 NLHDAFEDDNEMVMIY------EFMSGGELFEK 113
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 41.6 bits (97), Expect = 3e-04
Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 22/163 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRA--NSDNSLDT-EKIYLLEWAWNLHEN 776
+ APE A + D++S GV++ ++SG + +N +T + +W
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM----- 244
Query: 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKP 836
D + ++ I A P R + + + + G +
Sbjct: 245 -------DDSAFSGISEDGKDFI---RKLLLADPNTRMTIHQALEHPW--LTPGNAPGRD 292
Query: 837 SYLTDWDFKDITASF--LNEDTPTPSSSIKRRKSKEKSQRENP 877
S + + I S + P P + R + ++ P
Sbjct: 293 SQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRP 335
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (187), Expect = 1e-15
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
++G G +G VYKG + + ++ + Q F NE+ + +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
G + ++ L
Sbjct: 69 FMGYSTAPQL-------AIVTQWCEGSSLYH 92
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 1e-13
Identities = 19/107 (17%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 720 GYLAPEYAM---RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN 776
++APE + + ++DV++FG+V E+++G+ N + ++I +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------ 224
Query: 777 NQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
G + P L++ + + C + RP +++A +
Sbjct: 225 ----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.8 bits (186), Expect = 1e-15
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASH--QGKNQFVNEIATISAV 696
S +D++ +G G YG K SDG+++ K+L S K V+E+ + +
Sbjct: 1 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 60
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+H N+VR Y I+ L Y+ EY G L
Sbjct: 61 KHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGDLAS 94
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 2e-06
Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 15/101 (14%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
Y++PE R EK+D++S G + E+ + E +
Sbjct: 179 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-------- 230
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVV 820
+ E +I RP + ++
Sbjct: 231 ----FRRIPYRYSDELNEII---TRMLNLKDYHRPSVEEIL 264
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.0 bits (186), Expect = 1e-15
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
+G+G +G V++G G +AVK S + EI ++H N++
Sbjct: 10 SIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-FREAEIYQTVMLRHENILGFIAADN 67
Query: 710 EGARRLLVYDGYLAPEYAMRGHLTE 734
+ +L +Y G L +
Sbjct: 68 KDNGTWTQL--WLVSDYHEHGSLFD 90
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.2 bits (158), Expect = 6e-12
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 12/116 (10%)
Query: 720 GYLAPEY------AMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY----LLEW 769
Y+APE ++AD+++ G+V E+ + D + Y +
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 770 AWNLHENNQSLGLVDPTLTE-FNDKEALR-VIGVALLCTQASPMMRPPMSRVVAML 823
+ + P + + EALR + + C A+ R R+ L
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.1 bits (184), Expect = 2e-15
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNLVR 703
+LG G +G V KG + +AVK L ++ K++ + E + + + +VR
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 704 LYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK 735
+ G C E +LV + G L H+ +K
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK 107
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (145), Expect = 2e-10
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE + K+DV+SFGV+ E S + ++ + E +
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT------AMLEKGER 228
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+G E D + LC RP + V L
Sbjct: 229 MGCPAGCPREMYD--------LMNLCWTYDVENRPGFAAVELRL 264
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 75.3 bits (184), Expect = 3e-15
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNL 701
+ K+GEG YG VYK + G A+K++ + + + EI+ + ++H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 702 VRLYGCCIEGARRLLVYD 719
V+LY R +LV++
Sbjct: 63 VKLYDVIHTKKRLVLVFE 80
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 75.1 bits (184), Expect = 4e-15
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ-FVNEIATISAVQHR 699
+D + LG G + V +++A+K ++ + +GK NEIA + ++H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 700 NLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK 735
N+V L G L+ G L +G TE+
Sbjct: 68 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER 107
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.5 bits (89), Expect = 0.003
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
GY+APE + ++ D +S GV+A ++ G
Sbjct: 174 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.8 bits (183), Expect = 4e-15
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 648 SNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIASHQGK-NQFVNEIATISAVQHRNLV 702
+ +G G +G VY GTL D AVK L+ + G+ +QF+ E + H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C+ + Y G L
Sbjct: 92 SLLGICLRSEGSP-----LVVLPYMKHGDL 116
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 9e-13
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++A E T K+DV+SFGV+ E+++ A ++T + L + +
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLLQGRR- 252
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
L+ P E+ V+ L C MRP S +V+ +
Sbjct: 253 --LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRI 288
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 5e-15
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 649 NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQG-KNQFVNEIATISAVQHRNLVRLYG 706
+ +GEG YG V + +A+K++S HQ + + EI + +H N++ +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGH 731
+ + M
Sbjct: 74 IIRAPTIEQMKD--VYLVTHLMGAD 96
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.9 bits (181), Expect = 5e-15
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRN 700
+D+D LGEG YG V +AVK + + + EI + H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 701 LVRLYGCCIEGARRLLVYD 719
+V+ YG EG + L +
Sbjct: 65 VVKFYGHRREGNIQYLFLE 83
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (111), Expect = 5e-06
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 14/101 (13%)
Query: 720 GYLAPEYAMRGHL-TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ 778
Y+APE R E DV+S G+V +++G D D+ + Y + E
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS-----DWKEKKT 224
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRV 819
L D L ++ +P R + +
Sbjct: 225 YLNPWKKI-----DSAPLALL---HKILVENPSARITIPDI 257
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.0 bits (181), Expect = 5e-15
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIASHQG-KNQFVNEIATISAVQH 698
+ +GEG +G V++G +A+K + + +F+ E T+ H
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
++V+L G E ++ E G L
Sbjct: 68 PHIVKLIGVITENPV-------WIIMELCTLGEL 94
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (120), Expect = 3e-07
Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE T +DV+ FGV E++ + + EN +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------GRIENGE- 226
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ ++ C P RP + + A L
Sbjct: 227 ----RLPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 263
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 9e-15
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 639 RSATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ 697
R + + +G G +G VY+ L G ++A+K++ Q K E+ + +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 71
Query: 698 HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
H N+VRL + L +Y
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.5 bits (180), Expect = 1e-14
Identities = 23/100 (23%), Positives = 31/100 (31%), Gaps = 8/100 (8%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQHR 699
DF LGEG + V L+ R A+K L I E +S + H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 700 NLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK 735
V+LY + + G L G E
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 108
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (100), Expect = 1e-04
Identities = 6/33 (18%), Positives = 18/33 (54%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
Y++PE + +D+++ G + ++++G
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 1e-14
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 630 PNTFSYAELRSATK------DFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLS- 676
P FS A++ + S +LG+G +G VY+G +A+K ++
Sbjct: 1 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 60
Query: 677 IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
AS + + +F+NE + + ++VRL G +G L++ E RG L
Sbjct: 61 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM------ELMTRGDL 110
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.0 bits (152), Expect = 4e-11
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+++PE G T +DV+SFGVV E+ + L E++
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------ 247
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
+++ L + D + + +C Q +P MRP +++ + ++E G
Sbjct: 248 --VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 1e-14
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 642 TKDFDPS-----NKLGEGGYGPVYKGTLSDG-----RVIAVKQLSIASHQG-KNQFVNEI 690
T + PS +G G +G VYKG L +A+K L + + F+ E
Sbjct: 1 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60
Query: 691 ATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ H N++RL G + +++ +
Sbjct: 61 GIMGQFSHHNIIRLEGVISKYKPMMIITE 89
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.3 bits (166), Expect = 5e-13
Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 14/110 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ APE T +DV+SFG+V EV++ L ++
Sbjct: 178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA------------ 225
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829
+ D + + + C Q RP + +V++L I
Sbjct: 226 --INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.3 bits (177), Expect = 1e-14
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQH 698
+DF+ LG+G +G VY ++A+K L + ++Q E+ S ++H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 699 RNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
N++RLYG + R L+ + G + E E+ E+ +
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANA 118
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (119), Expect = 4e-07
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
YL PE EK D++S GV+ E + G+ A E +
Sbjct: 169 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-------------PPFEANTYQETYKR 215
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVV 820
+ V+ T +F + A +I + +P RP + V+
Sbjct: 216 ISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 253
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 2e-14
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLS-IASHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L S + + ++E +++V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 698 HRNLVRLYGCCIEGARRLLVY---DGYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+ ++ RL G C+ +L+ G L + ++ +++ G
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---CVQIAKG 123
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.2 bits (132), Expect = 1e-08
Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++A E + T ++DV+S+GV E+++ + + + +I ++ E +
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS------SILEKGER 231
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
L + V + + C RP ++
Sbjct: 232 L--------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.6 bits (177), Expect = 2e-14
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 13/108 (12%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSI-ASHQGKNQF 686
L + + +GEG +G V++ ++AVK L AS + F
Sbjct: 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63
Query: 687 VNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
E A ++ + N+V+L G C G L++ EY G L E
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLF------EYMAYGDLNE 105
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 65.3 bits (158), Expect = 5e-12
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++ PE T ++DV+++GVV E+ S + E++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY------------ 254
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ D + + L + + LC P RP + +L
Sbjct: 255 --VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 3e-14
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 633 FSYAELRSATKD----FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQL--SIASHQGKNQ 685
F E+ + + +G G YG V G +A+K+L S +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEY 726
E+ + ++H N++ L D YL +
Sbjct: 64 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF 104
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.1 bits (176), Expect = 4e-14
Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 23/124 (18%)
Query: 626 IESKPNTFSYAELRSATKD----FDPSN-----KLGEGGYGPVYKGTLSD------GRVI 670
S N + Y + R D F N LG G +G V T +
Sbjct: 11 TGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQV 70
Query: 671 AVKQLSIASHQG-KNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAM 728
AVK L + + ++E+ ++ + H N+V L G C L++ EY
Sbjct: 71 AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF------EYCC 124
Query: 729 RGHL 732
G L
Sbjct: 125 YGDL 128
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (128), Expect = 4e-08
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 13/105 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE G T K+DV+S+G++ E+ S N + + + + L +N
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF-----YKLIQNGFK 285
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824
+ + + + C RP + + L
Sbjct: 286 M--------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 5e-14
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDG---RVIAVKQLS-IASHQGKNQFVNEIATISAV-Q 697
D + +GEG +G V K + A+K++ AS F E+ + +
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 698 HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
H N++ L G C L EYA G+L
Sbjct: 70 HPNIINLLGACEHRGYLYLAI------EYAPHGNL 98
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.7 bits (136), Expect = 4e-09
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++A E T +DV+S+GV+ E++S + ++Y L +
Sbjct: 191 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQG--- 242
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
D E ++ C + P RP ++++ L
Sbjct: 243 ---YRLEKPLNCDDEVYDLM---RQCWREKPYERPSFAQILVSL 280
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 72.1 bits (176), Expect = 6e-14
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLS---IASHQGKNQFVNEIATISAVQ-- 697
DF +G GG+G VY +D G++ A+K L I QG+ +NE +S V
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 698 -HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+V + + + + G L
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFIL------DLMNGGDL 94
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 70.5 bits (172), Expect = 8e-14
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN---QFVNEIATISAVQ 697
+ ++ LG GG V+ L R +AVK L + + +F E +A+
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 698 HRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
H +V +Y + Y+ EY L +
Sbjct: 66 HPAIVAVYDTGEAETPAGPLP--YIVMEYVDGVTLRD 100
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.0 bits (103), Expect = 4e-05
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 12/102 (11%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
YL+PE A + ++DV+S G V EV++G Y ++ E+
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-----HVREDPIP 233
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821
L+ + V+ L +P R + +
Sbjct: 234 PSARHEGLSA----DLDAVV---LKALAKNPENRYQTAAEMR 268
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.3 bits (174), Expect = 8e-14
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQH 698
+DF LG G +G V+ +GR A+K L + + +E +S V H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 699 RNLVRLYGCCIEGARRLLVYD 719
++R++G + + ++ D
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMD 84
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.3 bits (91), Expect = 0.002
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
Y+APE + D +SFG++ E+++G
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 198
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.4 bits (172), Expect = 9e-14
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 649 NKLGEGGYGPVYKGTLSD-GRVIAVKQLS--IASHQGKNQFVNEIATISAVQHRNLVRLY 705
++G G + VYKG ++ +A +L + + +F E + +QH N+VR Y
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 706 GCCIEGARRLLVYDGYLAPEYAMRGHL 732
+ L E G L
Sbjct: 75 DSWESTVKGKKCI--VLVTELMTSGTL 99
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (132), Expect = 9e-09
Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 14/101 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE E DV++FG+ LE+ + + +IY +
Sbjct: 178 EFMAPEM-YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY----------RRVT 226
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVV 820
G+ + + E +I C + + R + ++
Sbjct: 227 SGVKPASFDKVAIPEVKEII---EGCIRQNKDERYSIKDLL 264
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.3 bits (171), Expect = 1e-13
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQL--SIASHQGKNQFVNEIATISAVQHRN 700
+F K+GEG YG VYK G V+A+K++ + + + EI+ + + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 701 LVRLYGCCIEGARRLLVYD 719
+V+L + LV++
Sbjct: 63 IVKLLDVIHTENKLYLVFE 81
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (169), Expect = 3e-13
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRN 700
++ K+G+G +G V+K G+ +A+K++ + + + + EI + ++H N
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHL 732
+V L C A G YL ++
Sbjct: 71 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 104
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 4e-13
Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ------FVNEIATISA 695
+D +LG G + V K S G A K + + + E++ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK--ADVFSFGVVALEVI 749
+QH N++ L+ +L+ + G L A + LTE+ + + + +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 750 SGRANSDNSLDTEKIYLLE 768
+ L E I LL+
Sbjct: 130 HSLQIAHFDLKPENIMLLD 148
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (90), Expect = 0.002
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
++APE L +AD++S GV+ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.2 bits (168), Expect = 5e-13
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS--IASHQGKNQFVNEIATISAVQHR 699
K + +G G G V R +A+K+LS + + E+ + V H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++ L D YL E
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 109
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.3 bits (166), Expect = 5e-13
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 649 NKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQ-----FVNEIATISAVQHRNLV 702
+ LGEG + VYK + +++A+K++ + + EI + + H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 703 RLYGCCIEGARRLLVYD 719
L + LV+D
Sbjct: 64 GLLDAFGHKSNISLVFD 80
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (164), Expect = 1e-12
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGT--LSDGRVIAVKQLSIASHQGKN--QFVNEIA---TI 693
A + ++ ++GEG YG V+K + GR +A+K++ + + + + E+A +
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 694 SAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLT 733
+H N+VRL+ C L E+ + T
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTT 103
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 0.001
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL----------EW 769
Y APE ++ D++S G + E+ + S D +++ + +W
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239
Query: 770 AWNLHENNQSLGLVDPT-LTEFNDKEALRVIGVALLCTQASPMMRPPMSRV 819
++ Q+ + +F + L C +P R
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 2e-12
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHR 699
+ ++ K+GEG YG V+K ++A+K++ + + + EI + ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 700 NLVRLYGCCIEGARRLLVYDGY 721
N+VRL+ + LV++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC 83
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.8 bits (162), Expect = 2e-12
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 8/105 (7%)
Query: 629 KPNTFSYAELRSA----TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS--IASHQ 681
+P TF EL + + + +G G YG V G +AVK+LS S
Sbjct: 1 RP-TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 59
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEY 726
+ E+ + ++H N++ L D YL
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 5e-12
Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
LG G +G V++ S + K + + + EI+ ++ +HRN++ L+
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTEK 735
++++ E+ + E+
Sbjct: 71 ESMEELVMIF------EFISGLDIFER 91
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.0 bits (160), Expect = 5e-12
Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 40/246 (16%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAVQH 698
DFD LG+G +G V + GR A+K L I + V E + +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 699 RNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK--ADVFSFGVVALE----- 747
L L R V + G L + TE+ + V ALE
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 748 -VISGRANSDNSLDTE----KIYLLEWAWNLHENNQSLGLVDPTL-------------TE 789
V+ +N + + KI + ++ T
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYLTDWDFKDITA 849
D L V+ ++C + + +L +I +S + K + A
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP-------EAKSLLA 237
Query: 850 SFLNED 855
L +D
Sbjct: 238 GLLKKD 243
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.9 bits (157), Expect = 8e-12
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 644 DFDPSNKLGEGGYGPVYKGTL--------SDGRVIAVKQLSI-ASHQGKNQFVNEIATIS 694
LGEG +G V + +AVK L A+ + + ++E+ +
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 695 AV-QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+ +H+N++ L G C + ++ EYA +G+L E
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIV------EYASKGNLRE 108
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 5e-09
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE T ++DV+SFGV+ E+ + + + E+++ L
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL------------ 249
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
L + + + + C A P RP ++V L
Sbjct: 250 --LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 62.1 bits (150), Expect = 1e-11
Identities = 13/93 (13%), Positives = 22/93 (23%), Gaps = 12/93 (12%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS----------HQGKNQFVNEIATISAVQH 698
+GEG V+ VK + G F + +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGH 731
R L +L G + + + E
Sbjct: 66 RALQKLQGLAV--PKVYAWEGNAVLMELIDAKE 96
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 2e-11
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 11/96 (11%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLS---IASHQGKNQFVNEIATISAV-QH 698
DF LG+G +G V+ + A+K L + + E +S +H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
L ++ + EY G L
Sbjct: 63 PFLTHMFCTFQTKENL------FFVMEYLNGGDLMY 92
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 0.004
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGR 752
Y+APE + D +SFGV+ E++ G+
Sbjct: 168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.1 bits (155), Expect = 2e-11
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 13/135 (9%)
Query: 614 KKDNDDEEVLVGIESKPNTF--SYAELRSATK---DFDPSNKLGEGGYGPVYKGT-LSDG 667
KK ++ E V + F + T FD LG G +G V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 668 RVIAVKQLS---IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV----YDG 720
A+K L + + +NE + AV LV+L + + +V G
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 721 YLAPEYAMRGHLTEK 735
+ G +E
Sbjct: 127 EMFSHLRRIGRFSEP 141
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.6 bits (151), Expect = 5e-11
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
K+G G +G +Y GT ++ G +A+K + + Q E +Q + C
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 709 IEGARRLLVYDGYL 722
++ L
Sbjct: 72 GAEGDYNVMVMELL 85
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.4 bits (135), Expect = 5e-09
Identities = 16/124 (12%), Positives = 31/124 (25%), Gaps = 10/124 (8%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
Y + + + + D+ S G V + G K E +
Sbjct: 178 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS-----EKK 232
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYL 839
+ L + E + C +P S + + Y+
Sbjct: 233 MSTPIEVLCKGYPSEFATYL---NFCRSLRFDDKPDYSYLRQLFRNLFH--RQGFSYDYV 287
Query: 840 TDWD 843
DW+
Sbjct: 288 FDWN 291
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 61.6 bits (149), Expect = 7e-11
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 15/107 (14%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS---------HQGKNQFVNEIATI 693
+++P LG G V + + AVK + + + + + E+ +
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 694 SAVQ-HRNLVRLYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEK 735
V H N+++L LV+D G L + L+EK
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 110
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 62.2 bits (150), Expect = 7e-11
Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNL 701
D+ KLG G Y V++ +++ + VK L K + EI + ++ N+
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNI 92
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFS 740
+ L + R L E+ + +
Sbjct: 93 ITLADIVKDPVSRTP----ALVFEHVNNTDFKQLYQTLT 127
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (146), Expect = 1e-10
Identities = 46/277 (16%), Positives = 97/277 (35%), Gaps = 17/277 (6%)
Query: 55 TKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSG 114
L + N + L++ + + R+F PL R+ + L+++V
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQG-VIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEV 60
Query: 115 -PVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCG--ASGEIPSTFAKL 171
+ L +L LSL S + + + L L + C + + + +
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 172 HNMQIL------RASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESL 225
+ L ++ H + T+L + N + + + + + +L L
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 226 RISDIYFVSSSLDFVMSLKN-LKDLSLRN-ALITGTIPSGIGELQNLQTLDLSFNNLTGQ 283
+SD + + N L+ LSL I +GE+ L+TL + G
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240
Query: 284 IPRTLFNIDSLNYLFLGNNSLSG-TLPTQKSENLQNI 319
+ ++L +L + + + PT ++ Q I
Sbjct: 241 LQLL---KEALPHLQINCSHFTTIARPTIGNKKNQEI 274
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (105), Expect = 2e-05
Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 7/119 (5%)
Query: 271 QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQ-KSENLQNIDLSYNHLSGP 329
QTLDL+ NL + L + + + + L +Q++DLS + +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVS 61
Query: 330 FPSWVTSSLQ----MNLAVNNFTFDG-SNISVFPGLQCLQRNFPCNRNAPRYANFSIKC 383
+ S ++L + + ++ L L + + C
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 4e-04
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 224 SLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ 283
+L ++ ++S + + + + + +Q +DLS + +
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVS 61
Query: 284 IPRTLF-NIDSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVTSSLQM 340
+ L L L LS + K+ NL ++LS F S
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 341 NLAVNNFTF 349
L N ++
Sbjct: 122 RLDELNLSW 130
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (146), Expect = 2e-10
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKN------QFVNEIATISAVQ--HRN 700
LG GG+G VY G +SD +A+K + + E+ + V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 701 LVRLYGCCIEGARRLLVYD-----GYLAPEYAMRGHLTEK 735
++RL +L+ + L RG L E+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 110
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 2e-10
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 644 DFDPSNKLGEGGYGPVYKGT------LSDGRVIAVKQLSIASHQGKNQ-FVNEIATISA- 695
LG G +G V + + R +AVK L + +++ ++E+ +
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 696 VQHRNLVRLYGCCIEGARRLLVY 718
H N+V L G C + L+V
Sbjct: 74 GHHLNVVNLLGACTKPGGPLMVI 96
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.1 bits (129), Expect = 3e-08
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 13/104 (12%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
++APE T ++DV+SFGV+ E+ S A+ + + E +
Sbjct: 201 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----EEFCRRLKEGTR 255
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
+ D T E L C P RP S +V L
Sbjct: 256 MRAPDYTTPEMYQ--------TMLDCWHGEPSQRPTFSELVEHL 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 58.7 bits (141), Expect = 9e-10
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN-LVRLYGC 707
++GEG +G +++GT L + + +A+K Q +E T + + +Y
Sbjct: 12 RIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEYRTYKLLAGCTGIPNVYYF 69
Query: 708 CIEGARRLLVYD 719
EG +LV D
Sbjct: 70 GQEGLHNVLVID 81
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 49.4 bits (117), Expect = 7e-07
Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 10/124 (8%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
Y++ + + + D+ + G V + + G E + E QS
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER---IGEKKQS 234
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGTVISKPSYL 839
L L +E + + + P + + + +E + +
Sbjct: 235 TPL--RELCAGFPEEFYKYM---HYARNLAFDATPDYDYLQGLFSKVLE--RLNTTEDEN 287
Query: 840 TDWD 843
DW+
Sbjct: 288 FDWN 291
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.5 bits (140), Expect = 1e-09
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 650 KLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG G + V+ + + +A+K + +EI + V + +
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+LL + + P + E
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFE 104
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 7/209 (3%)
Query: 96 IGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYI 155
+ ++ ++ + +P +L K+ +L L+ N + +L +L +
Sbjct: 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS 215
D + + L + + + T L + S
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 216 LSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDL 275
L + L+ +++ + L L+ N +T + L+NL TL L
Sbjct: 123 LGE-LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN--LTELPAGLLNGLENLDTLLL 179
Query: 276 SFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
N+L IP+ F L + FL N
Sbjct: 180 QENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (114), Expect = 1e-06
Identities = 41/243 (16%), Positives = 71/243 (29%), Gaps = 41/243 (16%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKG--VIPEELVTLQYLTFLKIDRNFFTGPLPSFIGN 98
+C+ + +K+ +P +L + T L + N + +
Sbjct: 3 ICEV-------SKVASHLEVNCDKRNLTALPPDL--PKDTTILHLSENLLYTFSLATLMP 53
Query: 99 LSRLTLLSLAH-NVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157
+RLT L+L + V L L L+ ++N +LP L L L +
Sbjct: 54 YTRLTQLNLDRAELTKLQVDGTLPVLGTLD----LSHNQLQSLPLLGQTLPALTVLDVSF 109
Query: 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLS 217
+ L +Q L P + KL L L N+ L+
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 218 KLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSF 277
L +L++L + + + IP G L L
Sbjct: 170 GLENLDTLLLQENSLYT-------------------------IPKGFFGSHLLPFAFLHG 204
Query: 278 NNL 280
N
Sbjct: 205 NPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (105), Expect = 2e-05
Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 3/129 (2%)
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN 301
+ + +++ +T +P + ++ L LS N L TL L L L
Sbjct: 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 302 NSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQ 361
L+ L +DLS+N L T L V+ + GL
Sbjct: 65 AELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 362 CLQRNFPCN 370
LQ +
Sbjct: 125 ELQELYLKG 133
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 1e-08
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 18/114 (15%)
Query: 625 GIESKPNTFSYAELRSATKDFDPSNK-LGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQG 682
G++ K N D+ +++ LG G G V + A+K L Q
Sbjct: 1 GLQIKKNAI--------IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QD 47
Query: 683 KNQFVNEIATIS-AVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
+ E+ A Q ++VR+ + E G L +
Sbjct: 48 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL--LIVMECLDGGELFSR 99
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 0.003
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 12/163 (7%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
Y+APE + D++S GV+ ++ G ++ ++ + +
Sbjct: 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-- 235
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA----MLAGDIEVGTVISK 835
+P +E +E +I + P R ++ + M + + + +
Sbjct: 236 --FPNPEWSEV-SEEVKMLI---RNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 289
Query: 836 PSYLTDWDFKDITASFLNEDTPTPSSSIKRRKSKEKSQRENPV 878
D + + + T ++ K K+ NP+
Sbjct: 290 RVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 332
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 2e-08
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLS----IASHQGKNQFVNEIATIS 694
++F+ LG G YG V+ G++ A+K L + + E +
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 695 AVQHR-NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
++ LV L+ + +L +Y G L
Sbjct: 84 HIRQSPFLVTLHYAFQTETKL------HLILDYINGGEL 116
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 54.8 bits (130), Expect = 2e-08
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 267 LQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHL 326
+L+ L++S N L ++P L L N L+ +P + +NL+ + + YN L
Sbjct: 283 PPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLA-EVP-ELPQNLKQLHVEYNPL 336
Query: 327 SGPFPSWVTSSLQMNLAVNN 346
FP S++ +L +N+
Sbjct: 337 RE-FPDIP-ESVE-DLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.1 bits (115), Expect = 1e-06
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 12/83 (14%)
Query: 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANN 134
L L + N LP+ L RL + N + VP NLK+L+ + N
Sbjct: 283 PPSLEELNVSNNKLIE-LPALPPRLERL---IASFNHLAE-VPELPQNLKQLH---VEYN 334
Query: 135 NFSGALPPEIGNLAKLEELYIDS 157
P + +E+L ++S
Sbjct: 335 PLRE-FPDIPES---VEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 9e-05
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 219 LASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFN 278
SLE L +S+ + L+ L + +P QNL+ L + +N
Sbjct: 283 PPSLEELNVSNNKLIE----LPALPPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYN 334
Query: 279 NLTGQIPRTLFNIDSLN 295
L + P +++ L
Sbjct: 335 PLR-EFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 40.6 bits (93), Expect = 6e-04
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 244 KNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNS 303
+ +L L N ++ ++P +L++L S N+LT ++P + L L + NN+
Sbjct: 38 RQAHELELNNLGLS-SLPE---LPPHLESLVASCNSLT-ELPELPQS---LKSLLVDNNN 89
Query: 304 LSGTLPTQKSENLQNIDLSYNH 325
L + +
Sbjct: 90 LKALSDLPPLLEYLGVSNNQLE 111
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 40.2 bits (92), Expect = 0.001
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 275 LSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWV 334
N + +I SL L + NN L LP L+ + S+NHL+ P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP-RLERLIASFNHLAE-VPELP 323
Query: 335 TSSLQMNLAVNNFT 348
+ Q+++ N
Sbjct: 324 QNLKQLHVEYNPLR 337
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.8 bits (91), Expect = 0.001
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 36/120 (30%)
Query: 109 HNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTF 168
N S + L L+++NN LP L +L
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERL------------------ 309
Query: 169 AKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRIS 228
+ ++P+ N L L ++ N + P S+E LR++
Sbjct: 310 -IASFNHL---------AEVPELPQN---LKQLHVEYNPLRE-FPDIPE---SVEDLRMN 352
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 53.5 bits (127), Expect = 2e-08
Identities = 33/226 (14%), Positives = 65/226 (28%), Gaps = 18/226 (7%)
Query: 98 NLSRLTLLSLAHNVFSGPVP-RELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156
L+ ++ + + V +L + L+ G + L L L +
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG-----VQYLNNLIGLELK 71
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
+ P L + I T + S+L
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
L + + + +S+ N + + + L L TL
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS----------DLTPLANLSKLTTLKAD 181
Query: 277 FNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
N ++ P L ++ +L + L NN +S P + NL + L+
Sbjct: 182 DNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 41/218 (18%), Positives = 65/218 (29%), Gaps = 14/218 (6%)
Query: 122 NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASD 181
L ++ +N + + +L + L G + I L+N+ L D
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 182 AHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVM 241
I + L L P + + + D
Sbjct: 73 NQ--------ITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP 124
Query: 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN 301
L L T S + L NLQ L + ++ P L N+ L L +
Sbjct: 125 LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182
Query: 302 NSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ 339
N +S P NL + L N +S P TS+L
Sbjct: 183 NKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLF 220
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 8e-04
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 154 YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIP 213
Y+ A + A L + L+A D + P + + L + L+ N P
Sbjct: 155 YLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212
Query: 214 SSLSKLASLESLRISD 229
L+ ++L + +++
Sbjct: 213 --LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 0.001
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 78 LTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLAN 133
LT LK D N + P + +L L + L +N S P L N L +++L N
Sbjct: 175 LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.001
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 172 HNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIY 231
+ S + + N +KLT L+ N P L+ L +L + + +
Sbjct: 149 GLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206
Query: 232 FVSSSLDFVMSLKNLKDLSLRN 253
S + + + NL ++L N
Sbjct: 207 I--SDVSPLANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.002
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 93 PSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEE 152
+ + NLS+LT L N S P L +L L + L NN S + N + L
Sbjct: 166 LTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISD--VSPLANTSNLFI 221
Query: 153 LYI 155
+ +
Sbjct: 222 VTL 224
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 52.0 bits (123), Expect = 5e-08
Identities = 23/201 (11%), Positives = 58/201 (28%), Gaps = 18/201 (8%)
Query: 98 NLSRLTLLSLAHNVFSGPVPR-ELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156
L+ L + V + +L + L L + G + L L ++
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFS 70
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
+ + P ++ + + + + ++L
Sbjct: 71 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
++L + + ++ + + +T P + L L+ LD+S
Sbjct: 131 NRLELSSNTISDISALSGLTSLQQLNFSSNQ--------VTDLKP--LANLTTLERLDIS 180
Query: 277 FNNLTGQIPRTLFNIDSLNYL 297
N ++ L + +L L
Sbjct: 181 SNKVSD--ISVLAKLTNLESL 199
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 6e-08
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 7/127 (5%)
Query: 175 QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVS 234
++L + T + + +T L L N + P+ L+ L LE L+ SD +
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 235 SSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ---IPRTLFNI 291
+ L N L + L L+L N+L + R +
Sbjct: 58 VDGVANLPRLQELLLC-NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 292 DSLNYLF 298
S++ +
Sbjct: 117 PSVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.8 bits (100), Expect = 2e-05
Identities = 24/117 (20%), Positives = 35/117 (29%), Gaps = 30/117 (25%)
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN------------- 295
L L + +T + + +L + LDLS N L P L + L
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD 59
Query: 296 ---------YLFLGNNSLSGTLPTQ---KSENLQNIDLSYNHLSG--PFPSWVTSSL 338
L L NN L + Q L ++L N L + L
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 7/114 (6%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELN 127
+ L L +T L + N P+ L L +L + N +
Sbjct: 12 VLCHLEQLLLVTHLDLSHNRLRALPPAL-AALRCLEVLQASDNALENVDGVANLPRLQE- 69
Query: 128 LLSLANNNF-SGALPPEIGNLAKLEELYIDS---CGASGEIPSTFAKLHNMQIL 177
L L NN A + + +L L + C G L ++ +
Sbjct: 70 -LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.8 bits (87), Expect = 9e-04
Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 3/95 (3%)
Query: 271 QTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPF 330
+ L L+ +LT + L + + +L L +N L P + + + ++
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 331 PSWVTSSLQMNLAV-NNFTFDGSNISVFPGLQCLQ 364
L + NN + I L
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (122), Expect = 3e-07
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 269 NLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLGNNSLSGTLPT------QKSENLQNIDL 321
++Q+LD+ L+ L + + L + L+ + + L ++L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 322 SYNHLSGPFPSWVTSSLQMN 341
N L V LQ
Sbjct: 63 RSNELGDVGVHCVLQGLQTP 82
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (121), Expect = 3e-07
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 13/93 (13%)
Query: 244 KNLKDLSLRNALITGT----IPSGIGELQNLQTLDLSFNNLTGQIPRTLF-----NIDSL 294
L+ L L + ++ + + + + +L+ LDLS N L L L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 295 NYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
L L + S + + LQ ++ L
Sbjct: 429 EQLVLYDIYWSEEMEDR----LQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (118), Expect = 7e-07
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 221 SLESLRISDIYFVSSSL-DFVMSLKNLKDLSLRNALITG----TIPSGIGELQNLQTLDL 275
++SL I + + + L+ + + L + +T I S + L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 276 SFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306
N L + + SL
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 10/92 (10%)
Query: 198 LTALRLQGNSFQ-GPIPSSLSKLASLESLRISDIYFVSSSL----DFVMSLKNLKDLSLR 252
+ +L +Q L L + +R+ D + + L +L+LR
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 253 NALITGTIPSGIGEL-----QNLQTLDLSFNN 279
+ + + + +Q L L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 25/107 (23%)
Query: 194 NWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRN 253
+ L L L SSL+ +++ +L++L L N
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAAT--------------------LLANHSLRELDLSN 406
Query: 254 ALITGTIPSGIGE-----LQNLQTLDLSFNNLTGQIPRTLFNIDSLN 295
+ + E L+ L L + ++ L ++
Sbjct: 407 NCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 5e-04
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 9/83 (10%)
Query: 76 QYLTFLKIDRNFFTG----PLPSFIGNLSRLTLLSLAHNVFSGPVPRELG-----NLKEL 126
L L + + L + + L L L++N +L L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 127 NLLSLANNNFSGALPPEIGNLAK 149
L L + +S + + L K
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 0.001
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 10/92 (10%)
Query: 146 NLAKLEELYIDSCGASGE----IPSTFAKLHNMQILRASDAHFTGKIPDFIG-----NWT 196
+ L L++ C S + +T H+++ L S+ +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 197 KLTALRLQGNSFQGPIPSSLSKLA-SLESLRI 227
L L L + + L L SLR+
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEKDKPSLRV 458
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 0.002
Identities = 14/117 (11%), Positives = 33/117 (28%), Gaps = 29/117 (24%)
Query: 122 NLKELNLLSLANNNFSGALPPEI-GNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRAS 180
+++ L++ S A E+ L + + + +D CG +
Sbjct: 3 DIQSLDI---QCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKD------------- 46
Query: 181 DAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKL-----ASLESLRISDIYF 232
I + L L L+ N + + ++ L + +
Sbjct: 47 -------ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 12/92 (13%), Positives = 28/92 (30%), Gaps = 10/92 (10%)
Query: 78 LTFLKIDRNFFT-GPLPSFIGNLSRLTLLSLAHNVFSG----PVPRELGNLKELNLLSLA 132
+ L I + + L + ++ L + + L L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 133 NNNFSGALPPEIG-----NLAKLEELYIDSCG 159
+N + K+++L + +C
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 31/109 (28%)
Query: 268 QNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 327
L+ L L+ +++ +L L N +L+ +DLS N L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAA-------TLLANH-----------SLRELDLSNNCLG 410
Query: 328 GPFPSWVTSSLQMN--------LAVNNFTFDGSNISVFPGLQCLQRNFP 368
+ S++ L ++ + + LQ L+++ P
Sbjct: 411 DAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR-----LQALEKDKP 454
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.003
Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 4/75 (5%)
Query: 68 IPEELVTLQYLTFLKIDRNFFTG----PLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNL 123
E L LQ +++D T + S + L L+L N +
Sbjct: 19 WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQG 78
Query: 124 KELNLLSLANNNFSG 138
+ + +
Sbjct: 79 LQTPSCKIQKLSLQN 93
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 49.0 bits (115), Expect = 4e-07
Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 7/167 (4%)
Query: 116 VPRELG-NLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNM 174
+PR++ + EL L N + G L L +L + +G P+ F ++
Sbjct: 23 IPRDIPLHTTELLLND--NELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80
Query: 175 QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVS 234
Q L+ + +L L L N +P S L SL SL ++ F
Sbjct: 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140
Query: 235 SSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLT 281
+ + L+ SL PS +++++Q DL +
Sbjct: 141 NC-HLAWFAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEFK 183
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.9 bits (110), Expect = 3e-06
Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 18/205 (8%)
Query: 98 NLSRLTLLSLAHNVFSGPVP-RELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156
+ +L + V EL ++ ++ N++ I L + +L+++
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQNELNSIDQIIA---NNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
+ P A L N+ L + K +L G S +
Sbjct: 77 GNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLP 134
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
+ + + + L L LSL + I+ +P + L LQ L LS
Sbjct: 135 QLE------SLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 186
Query: 277 FNNLTGQIPRTLFNIDSLNYLFLGN 301
N+++ R L + +L+ L L +
Sbjct: 187 KNHISD--LRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.2 bits (108), Expect = 4e-06
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Query: 251 LRNALITGTIPSGIGE------LQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
L + IT +P+ I + +L ++T + + ++S++ + N+ +
Sbjct: 3 LGSETIT--VPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDI 58
Query: 305 SGTLPTQKSENLQNIDLSYNHLSGPF 330
Q N+ + L+ N L+
Sbjct: 59 KSVQGIQYLPNVTKLFLNGNKLTDIK 84
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (95), Expect = 1e-04
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 187 KIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNL 246
++ + + L L L + + ++ L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAATLRIIE-ENIPEL 67
Query: 247 KDLSLRNALITGT--IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
L+L N + + S + + NL+ L+LS N L + L L+L NSL
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 305 SGTLPTQKS 313
S T Q +
Sbjct: 128 SDTFRDQST 136
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 0.002
Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 5/138 (3%)
Query: 163 EIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASL 222
++ +K ++ PD + L + + + + L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR-SDPDLVAQ-NIDVVLNRRSSMAAT-LRIIEENIPEL 67
Query: 223 ESLRIS--DIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNL 280
SL +S +Y + V NLK L+L + + L+ L L N+L
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 281 TGQIPRTLFNIDSLNYLF 298
+ I ++ F
Sbjct: 128 SDTFRDQSTYISAIRERF 145
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 2e-04
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 5/146 (3%)
Query: 92 LPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLE 151
+ N R L L + L + + + ++N L +L+
Sbjct: 11 AAQYT-NAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLK 66
Query: 152 ELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTG-KIPDFIGNWTKLTALRLQGNSFQG 210
L +++ L ++ L ++ D + + LT L + N
Sbjct: 67 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN 126
Query: 211 PIPSSLSKLASLESLRISDIYFVSSS 236
L + + +R+ D V
Sbjct: 127 KKHYRLYVIYKVPQVRVLDFQKVKLK 152
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 2e-04
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Query: 267 LQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHL 326
+ LDL + I +D + + +N + L+ + ++ N +
Sbjct: 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRI 75
Query: 327 SGPFPSW 333
Sbjct: 76 CRIGEGL 82
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 0.001
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 232 FVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNL 280
+ + + + ++L LR I I + L +D S N +
Sbjct: 7 LIEQAAQYT-NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI 53
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Query: 258 GTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT 310
+P+ + LD+S + L N+ L N LPT
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 28/249 (11%), Positives = 66/249 (26%), Gaps = 18/249 (7%)
Query: 41 VCDCTFDNGATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLS 100
+C C+ + C +K+ IP +L + L+
Sbjct: 5 ICHCS-NRVFLCQESKVTE--------IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFG 53
Query: 101 RLTLLSLAHNVFSGPVPRELGNLKELNLLSL----ANNNFSGALPPEIGNLAKLEELYID 156
L + ++ N + ++ + N + + + +
Sbjct: 54 DLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT 113
Query: 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216
++ + + ++ + T + F+G + L L N Q +
Sbjct: 114 GIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF 173
Query: 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLS 276
+ E + D L + I G+ L+ L+
Sbjct: 174 NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST- 232
Query: 277 FNNLTGQIP 285
NL ++P
Sbjct: 233 -YNLK-KLP 239
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 6e-04
Identities = 20/142 (14%), Positives = 33/142 (23%), Gaps = 3/142 (2%)
Query: 1 MKQWDAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVY 60
+ + I P + + DN + G + L +
Sbjct: 102 LPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 161
Query: 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPREL 120
+ + Q D N S +L ++ L
Sbjct: 162 KNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 221
Query: 121 GNLKELNLLSLANNNFSGALPP 142
NLK+L S N LP
Sbjct: 222 ENLKKLRARSTYNL---KKLPT 240
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.2 bits (92), Expect = 7e-04
Identities = 34/302 (11%), Positives = 71/302 (23%), Gaps = 38/302 (12%)
Query: 91 PLPSFIGNLSRLTLLSLAHNVFSGPVPRELG-------NLKELNLLSLANNNFSGALPPE 143
+ + + + + L+ N R L +L+ + +P
Sbjct: 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEA 81
Query: 144 IGNLA-------KLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWT 196
+ L KL + + + + G
Sbjct: 82 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141
Query: 197 KLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALI 256
L N P S + L + + + L +
Sbjct: 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT-VKMVQNGIRP 200
Query: 257 TGTIPSGIGELQNLQTLDLSFNNLT-------GQIPRTLFNIDSLNYLFLGNNSLSGT-- 307
G + L Q L + + L + +L L L + LS
Sbjct: 201 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 260
Query: 308 ------LPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQ--------MNLAVNNFTFDGSN 353
++ LQ + L YN + + + + + L N F+ +
Sbjct: 261 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 320
Query: 354 IS 355
+
Sbjct: 321 VD 322
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.002
Identities = 16/167 (9%), Positives = 43/167 (25%), Gaps = 7/167 (4%)
Query: 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ----IPRTLFNIDSL 294
F + K+LK ++ ++ + + E +++ + LS N + + + + + L
Sbjct: 3 FSIEGKSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDL 61
Query: 295 NYLFLGNNSLS--GTLPTQKSENLQNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGS 352
+ + L L L S + +F +
Sbjct: 62 EIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHT 121
Query: 353 NISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGPQMRADNIVYEADN 399
+ + A ++ + N
Sbjct: 122 PLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 168
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 905 | |||
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.97 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.93 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.92 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.91 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.91 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.91 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.91 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.88 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.88 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.88 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.87 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.86 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.86 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.82 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.79 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.77 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.76 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.75 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.74 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.73 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.72 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.69 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.66 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.63 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.61 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.61 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.02 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.78 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 98.15 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.43 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.13 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 92.09 |
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=0 Score=261.64 Aligned_cols=276 Identities=27% Similarity=0.452 Sum_probs=200.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCC--CCCCCCCCCCCCCEEECC
Q ss_conf 686896477898879776787777889999994220788999960107799951475468--898001599999799877
Q 002581 7 PAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNKKG--VIPEELVTLQYLTFLKID 84 (905)
Q Consensus 7 ~~~~~w~~~~~~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~i~~L~l~~~~~~~--~~p~~l~~L~~L~~L~L~ 84 (905)
+.+.+|..++|+|.+ .| .||.|+... ...+|+.|++.+++++| .+|+.+..|++|++|+|+
T Consensus 22 ~~l~sW~~~~d~C~~--~w------------~gv~C~~~~---~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls 84 (313)
T d1ogqa_ 22 TTLSSWLPTTDCCNR--TW------------LGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIG 84 (313)
T ss_dssp GGGTTCCTTSCTTTT--CS------------TTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEE
T ss_pred CCCCCCCCCCCCCCC--CC------------CCEEEECCC---CCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCC
T ss_conf 867788999999889--48------------896974899---9479889989899888888798478467533520202
Q ss_pred C-CCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 9-989998952113895566775136658898861233998787476336658899992335877764778034477888
Q 002581 85 R-NFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGE 163 (905)
Q Consensus 85 ~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~ 163 (905)
+ |.++|.+|..|+++++|++|+|++|.+.+..+..+..+.+|++++++.|.+.+.+|..+.++++|+.+++++|.+.+.
T Consensus 85 ~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ 164 (313)
T d1ogqa_ 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164 (313)
T ss_dssp EETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCC
T ss_conf 65433300243114542001102035643443322222011100111122455556851220674000000235533562
Q ss_pred CCHHHHCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHC
Q ss_conf 86122116766-40002576256889988777645782432255688879822359999989980286367789243407
Q 002581 164 IPSTFAKLHNM-QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFVMS 242 (905)
Q Consensus 164 ~p~~l~~L~~L-~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 242 (905)
+|..+..+..+ +.++++.|++++..|..+..+..+ .++++.+...+.+|..+..+.+++.+++.++
T Consensus 165 ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~------------ 231 (313)
T d1ogqa_ 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKN------------ 231 (313)
T ss_dssp CCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSS------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------
T ss_conf 031214431123231022464353324332222222-3333334332222222222222111222222------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC-CCCCCEEEE
Q ss_conf 8754411222520358898334799998999566896876688111399999799786886966799888-999889980
Q 002581 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK-SENLQNIDL 321 (905)
Q Consensus 243 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~-~~~L~~LdL 321 (905)
.+.+.++ .+..+++|+.|++++|+++|.+|..+..+++|++|+|++|+++|.+|... ..+|+.+++
T Consensus 232 ------------~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l 298 (313)
T d1ogqa_ 232 ------------SLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY 298 (313)
T ss_dssp ------------EECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGT
T ss_pred ------------CCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf ------------2222222-222455444444765706660876884799999897958835166898666799897886
Q ss_pred ECCC
Q ss_conf 1587
Q 002581 322 SYNH 325 (905)
Q Consensus 322 s~N~ 325 (905)
++|+
T Consensus 299 ~~N~ 302 (313)
T d1ogqa_ 299 ANNK 302 (313)
T ss_dssp CSSS
T ss_pred CCCC
T ss_conf 8895
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=250.54 Aligned_cols=182 Identities=23% Similarity=0.404 Sum_probs=140.3
Q ss_pred CCCHHHHHHHHCCCC---------CCCCCCCCCCEEEEEEEEC-CC---CEEEEEECCCC-CCCCHHHHHHHHHHHHHCC
Q ss_conf 549999998715999---------7894354463619999917-99---39999991222-8103899999999995089
Q 002581 632 TFSYAELRSATKDFD---------PSNKLGEGGYGPVYKGTLS-DG---RVIAVKQLSIA-SHQGKNQFVNEIATISAVQ 697 (905)
Q Consensus 632 ~~~~~~l~~~t~~~~---------~~~~lG~G~fG~Vy~g~~~-~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~ 697 (905)
.++|++...++.+|. ..++||+|+||+||+|... ++ ..||||++... .....++|.+|+++|++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 85 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHCHHHCHHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 88879899999604622080042785698027882999999957997889999999784459899999999999998579
Q ss_pred CCCCCEEEEEEEECCEEEEEEC----------------------------------------------------------
Q ss_conf 9991018739980996489973----------------------------------------------------------
Q 002581 698 HRNLVRLYGCCIEGARRLLVYD---------------------------------------------------------- 719 (905)
Q Consensus 698 H~niv~l~g~~~~~~~~~Lv~e---------------------------------------------------------- 719 (905)
|||||+++|+|.+.+..++|||
T Consensus 86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~ 165 (299)
T d1jpaa_ 86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL 165 (299)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred CCCCCCEEEEEEECCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
T ss_conf 98886189999628877999972279853002104567999999999999999988988527983576150448988999
Q ss_pred --------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHH
Q ss_conf --------------------------------8888233314988744742753234678672-9999999996102119
Q 002581 720 --------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYL 766 (905)
Q Consensus 720 --------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l 766 (905)
.|||||++.++.++.++|||||||++|||+| |+.||......+ +
T Consensus 166 ~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~---~ 242 (299)
T d1jpaa_ 166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD---V 242 (299)
T ss_dssp CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---H
T ss_pred CEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH---H
T ss_conf 1998884431575677776536502566688300387888369978612144535789999867999999999999---9
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 99999885139524332797888999999999999998023899999998999999852736
Q 002581 767 LEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 767 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
...+ ..+. .+.. +.++...+.+++.+||+.+|++||||.||++.|+..++
T Consensus 243 ~~~i----~~~~-----~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 243 INAI----EQDY-----RLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHH----HTTC-----CCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHH----HCCC-----CCCC---CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHC
T ss_conf 9999----7378-----8999---74226999999999758797689299999999999841
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=248.71 Aligned_cols=171 Identities=26% Similarity=0.416 Sum_probs=135.2
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC---
Q ss_conf 59997894354463619999917993999999122281038999999999950899991018739980996489973---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e--- 719 (905)
++|...+.||+|+||+||+|.+.++..||||++... ....++|.+|++++++++|||||+++|+|.+.+..++|+|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEECC
T ss_conf 995888898208882999999889999999998788-6768999999999996689975653524315993379998369
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 163 (263)
T d1sm2a_ 84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163 (263)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCCCEEECCEE
T ss_conf 99189975201347889999999999999877653164310443153266668877686553210023688733504300
Q ss_pred ---CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ---88882333149887447427532346786729999999996102119999998851395243327978889999999
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|||||++.+..++.|+|||||||++|||+|++.|+....... .+...+. .+ .....| ..+..
T Consensus 164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~--~~~~~i~----~~--~~~~~p------~~~~~ 229 (263)
T d1sm2a_ 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDIS----TG--FRLYKP------RLAST 229 (263)
T ss_dssp -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH--HHHHHHH----HT--CCCCCC------TTSCH
T ss_pred CCCCCCCHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH----HC--CCCCCC------CCCCH
T ss_conf 1766678578607999840332105999999987898887789999--9999998----06--888995------43679
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 99999998023899999998999999852736
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 797 ~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
++.+++.+||+.+|++||||+||+++|+...+
T Consensus 230 ~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999765797689199999999999985
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=243.09 Aligned_cols=166 Identities=22% Similarity=0.423 Sum_probs=135.5
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC---
Q ss_conf 59997894354463619999917993999999122281038999999999950899991018739980996489973---
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD--- 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e--- 719 (905)
++|...+.||+|+||+||+|+++++..||||+++.. ....++|.+|+.++++++|||||+++|+|.+....++|+|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCC
T ss_conf 997996898207883999999889989999998747-5778999999999996689860158899850781699997048
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 162 (258)
T d1k2pa_ 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162 (258)
T ss_dssp TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSC
T ss_pred CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCCCCEEECCCC
T ss_conf 99388864102467768999999999999999875468434665413588769984798861442023578722524657
Q ss_pred ---CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf ---8888233314988744742753234678672-999999999610211999999885139524332797888999999
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
.|+|||.+....++.|+|||||||++|||+| |+.||......+ +. .....+. ....| ..+.
T Consensus 163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~---~~----~~i~~~~--~~~~p------~~~~ 227 (258)
T d1k2pa_ 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TA----EHIAQGL--RLYRP------HLAS 227 (258)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HH----HHHHTTC--CCCCC------TTCC
T ss_pred CCCCCCCCHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHH---HH----HHHHHCC--CCCCC------CCCC
T ss_conf 88775780786379988521033643246739755999988999999---99----9998079--78996------5465
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999802389999999899999985
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 796 ~~~~~i~~~C~~~~p~~RPsm~ev~~~L~ 824 (905)
.++.+++.+||+.+|++||||.++++.|.
T Consensus 228 ~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 228 EKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99999999976689768939999998741
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=245.15 Aligned_cols=174 Identities=22% Similarity=0.366 Sum_probs=135.5
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEECCC-----CEEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
Q ss_conf 15999789435446361999991799-----39999991222-8103899999999995089999101873998099648
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDG-----RVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
.+.|+..++||+|+||+||+|.+... ..||||++... ......+|.+|+.++++++|||||+++|+|.+....+
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~ 85 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 85 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEE
T ss_conf 89968615981177909999999689987879999999884459689999999999998568987832367783388038
Q ss_pred EEEC----------------------------------------------------------------------------
Q ss_conf 9973----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 Lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCC
T ss_conf 99972135740222102345420899999999999854121212342576564427888998499845510300357876
Q ss_pred ------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf ------------88882333149887447427532346786729999999996102119999998851395243327978
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|||||++.++.++.|+|||||||++|||+|++.|+........ +... ...+ ..+..
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~--~~~~----i~~~-----~~~~~ 234 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKA----INDG-----FRLPT 234 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH----HHTT-----CCCCC
T ss_pred CCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH--HHHH----HHCC-----CCCCC
T ss_conf 52674267777343488887049999735563448989999967988655689999--9999----8635-----78998
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 889999999999999980238999999989999998527367
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 788 ~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~~ 829 (905)
+..++.++.+++.+||+.+|++||||.||+++|+...+.
T Consensus 235 ---~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 235 ---PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp ---CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---CHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf ---504579999999997767976893999999999998669
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=248.35 Aligned_cols=181 Identities=25% Similarity=0.400 Sum_probs=142.1
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
Q ss_conf 499999987159997894354463619999917-9939999991222810389999999999508999910187399809
Q 002581 633 FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711 (905)
Q Consensus 633 ~~~~~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~ 711 (905)
..|++|+...++|...+.||+|+||+||+|... +++.||||++... ....++|.+|+.+|++++|||||+++|+|.+.
T Consensus 7 p~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~ 85 (287)
T d1opja_ 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 85 (287)
T ss_dssp TTCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCCCCCEECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCC-CCHHHHHHHHHHHHHHCCCCCEECCCCCEEEC
T ss_conf 99765174579939865982088808999999999969999997776-10399999999999867999882677527457
Q ss_pred CEEEEEEC------------------------------------------------------------------------
Q ss_conf 96489973------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~Lv~e------------------------------------------------------------------------ 719 (905)
+..++|+|
T Consensus 86 ~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~ 165 (287)
T d1opja_ 86 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 165 (287)
T ss_dssp SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEEC
T ss_conf 85478763146760677753035541579999999999999788898789305760457689989992898324454653
Q ss_pred ---------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---------------88882333149887447427532346786729999999996102119999998851395243327
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 ---------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
.|||||++.++.++.|+|||||||++|||+||+.|+........ +. .....+ ..
T Consensus 166 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~--~~----~~i~~~-----~~ 234 (287)
T d1opja_ 166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY----ELLEKD-----YR 234 (287)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH----HHHHTT-----CC
T ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HH----HHHHCC-----CC
T ss_conf 78872210355665466692787279998104302178999999867998877425999--99----998558-----88
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 97888999999999999998023899999998999999852736
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
+.... .+..++.+++..||+.+|++||||.||++.|+...+
T Consensus 235 ~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 235 MERPE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred CCCCC---CCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 88874---330999999999757797689399999999999987
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=247.58 Aligned_cols=173 Identities=23% Similarity=0.381 Sum_probs=134.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 99987159997894354463619999917993999999122281038999999999950899991018739980996489
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 637 ~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~L 716 (905)
+++...++|...+.||+|+||+||+|.+.++..||||++... ....++|.+|++++++++|||||+++|+|.+ +..++
T Consensus 7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~i 84 (272)
T d1qpca_ 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (272)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred CEECCHHHEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEECC-CCEEE
T ss_conf 700388993886798107982899999999999999998647-6888999999999986799988578731045-97699
Q ss_pred EEC-----------------------------------------------------------------------------
Q ss_conf 973-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~ 164 (272)
T d1qpca_ 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (272)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred EEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCCEEECCCCCC
T ss_conf 99957898288887514789887889999999999999999748954675642251562024404234101477358864
Q ss_pred ----------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf ----------8888233314988744742753234678672999999999610211999999885139524332797888
Q 002581 720 ----------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ----------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
+|||||++.++.++.|+|||||||++|||+||+.|+....... .+...+ ..+ ..+..+.
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~--~~~~~i----~~~-----~~~~~p~ 233 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNL----ERG-----YRMVRPD 233 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHH----HTT-----CCCCCCT
T ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHH----HHC-----CCCCCCC
T ss_conf 42035677444458289837999824564525799999996898888888999--999999----706-----8888965
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 999999999999998023899999998999999852
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 790 ~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 825 (905)
.+...+.+++.+||+.+|++||||++|+++|+.
T Consensus 234 ---~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~ 266 (272)
T d1qpca_ 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (272)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf ---571999999999758897689399999998611
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=244.81 Aligned_cols=177 Identities=21% Similarity=0.376 Sum_probs=135.2
Q ss_pred HHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
Q ss_conf 99871599978943544636199999179939999991222--8103899999999995089999101873998099648
Q 002581 638 LRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 638 l~~~t~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
|+...++|...+.||+|+||+||+|++.+ .||||+++.. .....+.|.+|+.+|++++|||||+++|+|.+ ...+
T Consensus 3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~ 79 (276)
T d1uwha_ 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA 79 (276)
T ss_dssp CBCCTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEEECC--EEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEEE
T ss_conf 13154518998898307885899999999--89999997346998999999999999984799878645679715-5899
Q ss_pred EEEC----------------------------------------------------------------------------
Q ss_conf 9973----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 Lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~ 159 (276)
T d1uwha_ 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159 (276)
T ss_dssp EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred EEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCCCEEECCCCCEEECCCCCC
T ss_conf 99965899888999852357899999999999999998887509995161478997981899788750022133355677
Q ss_pred -----------CCCCHHHHCC---CCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -----------8888233314---98874474275323467867299999999961021199999988513952433279
Q 002581 720 -----------GYLAPEYAMR---GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 -----------~y~APE~~~~---~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 785 (905)
.|||||++.+ +.|+.|+|||||||++|||+||+.||.......... .....+ ...|
T Consensus 160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~------~~~~~~----~~~p 229 (276)
T d1uwha_ 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII------FMVGRG----YLSP 229 (276)
T ss_dssp ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------HHHHHT----SCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH------HHHHCC----CCCC
T ss_conf 631256655743179999950568999953151635999999997889989989699999------999658----8898
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 788899999999999999802389999999899999985273
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
.+......+...+.+++.+||+.+|++||||.||++.|+...
T Consensus 230 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~ 271 (276)
T d1uwha_ 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271 (276)
T ss_dssp CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHHCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 600036555499999999975889768929999999999999
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-45 Score=244.41 Aligned_cols=179 Identities=21% Similarity=0.377 Sum_probs=141.0
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC------CCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 99999987159997894354463619999917------99399999912228-103899999999995089999101873
Q 002581 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYG 706 (905)
Q Consensus 634 ~~~~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g 706 (905)
.+.+++.++++|+..+.||+|+||+||+|++. +++.||||++.... ....++|.+|++++++++|+||++++|
T Consensus 4 ~~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~ 83 (301)
T d1lufa_ 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLG 83 (301)
T ss_dssp HHHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred CHHHCCCCHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 53311389889388679820788399999988876577882999999882108579999999999999668997655246
Q ss_pred EEEECCEEEEEEC-------------------------------------------------------------------
Q ss_conf 9980996489973-------------------------------------------------------------------
Q 002581 707 CCIEGARRLLVYD------------------------------------------------------------------- 719 (905)
Q Consensus 707 ~~~~~~~~~Lv~e------------------------------------------------------------------- 719 (905)
+|......++|+|
T Consensus 84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivH 163 (301)
T d1lufa_ 84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH 163 (301)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 66059803899981589929999985275542100001110012103467889899999999999999855413578685
Q ss_pred -------------------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCC-CC
Q ss_conf -------------------------------------------8888233314988744742753234678672999-99
Q 002581 720 -------------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRA-NS 755 (905)
Q Consensus 720 -------------------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~-p~ 755 (905)
.|||||++.+..++.|+|||||||++|||+||.. |+
T Consensus 164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~ 243 (301)
T d1lufa_ 164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243 (301)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred EEECCCCEEECCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf 48840116898999289833144211367764111577776767679899726889805630252362999980689999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 999961021199999988513952433279788899999999999999802389999999899999985273
Q 002581 756 DNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 756 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
......+ +... ..++.. +.. +..++.++..++.+||+.+|++||||.||+++|+...
T Consensus 244 ~~~~~~e---~~~~----v~~~~~-----~~~---p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 244 YGMAHEE---VIYY----VRDGNI-----LAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp TTSCHHH---HHHH----HHTTCC-----CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCHHH---HHHH----HHCCCC-----CCC---CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHC
T ss_conf 9989999---9999----973997-----888---7325299999999974889657939999999999842
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-45 Score=241.20 Aligned_cols=173 Identities=23% Similarity=0.354 Sum_probs=135.8
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 87159997894354463619999917993999999122281038999999999950899991018739980996489973
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 640 ~~t~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e 719 (905)
...++|...+.||+|+||+||+|.+.++..||||++... ....++|.+|+.++++++|+|||+++|+|.+ +..++|+|
T Consensus 14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E 91 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 91 (285)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CCEEEEEE
T ss_conf 477997984699307980999999999999999998804-4888999999999986666788689999823-97599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 171 (285)
T d1fmka3 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171 (285)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred ECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCCCHHHHCCCCCCEEE
T ss_conf 44799435420000355305999999999999999987541143353123079998999299844255542568873352
Q ss_pred -------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf -------8888233314988744742753234678672999999999610211999999885139524332797888999
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
+|+|||++..+.++.|+|||||||++|||+||+.|+....... .+..++. .+ ..+... .
T Consensus 172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~--~~~~~i~----~~-----~~~~~~---~ 237 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVE----RG-----YRMPCP---P 237 (285)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHH----TT-----CCCCCC---T
T ss_pred CCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHH--HHHHHHH----HC-----CCCCCC---C
T ss_conf 45455665458089837998917741323589999986899999888899--9999998----26-----899998---3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 999999999998023899999998999999852736
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 793 ~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
.+..++.+++.+||+.+|++||+|++|+++|+....
T Consensus 238 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~ 273 (285)
T d1fmka3 238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273 (285)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHC
T ss_conf 237999999999756697589199999998766623
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-44 Score=238.86 Aligned_cols=168 Identities=20% Similarity=0.330 Sum_probs=130.1
Q ss_pred HCCCCCCC-CCCCCCCEEEEEEEEC---CCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 15999789-4354463619999917---99399999912228-1038999999999950899991018739980996489
Q 002581 642 TKDFDPSN-KLGEGGYGPVYKGTLS---DGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 642 t~~~~~~~-~lG~G~fG~Vy~g~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~L 716 (905)
.+++...+ .||+|+||+||+|.+. ++..||||+++... ....++|.+|+++|++++|||||+++|+|.. +..++
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l 85 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 85 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred CCCEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC-CEEEE
T ss_conf 44718878487306080999999960897689999998820397899999999999986799888068656036-80799
Q ss_pred EEC-----------------------------------------------------------------------------
Q ss_conf 973-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|||
T Consensus 86 vmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 86 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEECCCHHHHCCCCCCCC
T ss_conf 99807899689975212569999999999999999878998688105767646604546885420331342115543432
Q ss_pred -----------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf -----------8888233314988744742753234678672-9999999996102119999998851395243327978
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|||||++.++.++.|+|||||||++|||+| |+.||......+ +. .....+.. +..
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~---~~----~~i~~~~~-----~~~ 233 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VM----AFIEQGKR-----MEC 233 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HH----HHHHTTCC-----CCC
T ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHCCCC-----CCC
T ss_conf 1135621137433586887279999541232201789999938999999979999---99----99981899-----999
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 88999999999999998023899999998999999852
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 788 ~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 825 (905)
+ ..++..+.+++..||+.+|++||||.+|++.|+.
T Consensus 234 p---~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 234 P---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp C---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 9---7678999999999757797689099999999999
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.2e-43 Score=234.92 Aligned_cols=248 Identities=27% Similarity=0.422 Sum_probs=186.3
Q ss_pred CCCEEECCCCCCCCC--CCHHHCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 997998779989998--952113895566775136-65889886123399878747633665889999233587776477
Q 002581 77 YLTFLKIDRNFFTGP--LPSFIGNLSRLTLLSLAH-NVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEEL 153 (905)
Q Consensus 77 ~L~~L~L~~N~l~~~--~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 153 (905)
+++.|+|++|.+.+. +|..+++|++|++|+|++ |.+.|.+|..|++|++|++|+|++|++.+..+..+..+.+|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCC
T ss_conf 98899898998888887984784675335202026543330024311454200110203564344332222201110011
Q ss_pred EECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 803447788886122116766400025762568899887776457-8243225568887982235999998998028636
Q 002581 154 YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKL-TALRLQGNSFQGPIPSSLSKLASLESLRISDIYF 232 (905)
Q Consensus 154 ~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 232 (905)
+++.|.+.+.+|..+.+++.|+.+++++|.+.+.+|..+..+..+ +.++++.|++++..+..+.
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~--------------- 195 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA--------------- 195 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGG---------------
T ss_pred CCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------
T ss_conf 11224555568512206740000002355335620312144311232310224643533243322---------------
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 77892434078754411222520358898334799998999566896876688111399999799786886966799888
Q 002581 233 VSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK 312 (905)
Q Consensus 233 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 312 (905)
.+.. ..+++..+...+.+|..+..+++++.+++++|.+.+.+| .+..+++|+.|+|++|+++|.+|..+
T Consensus 196 ---------~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l 264 (313)
T d1ogqa_ 196 ---------NLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp ---------GCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGG
T ss_pred ---------CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHH
T ss_conf ---------2222-233333343322222222222221112222222222222-22245544444476570666087688
Q ss_pred --CCCCCEEEEECCCCCCCCCCCCC-CCCC-CCCCCCCCEEC
Q ss_conf --99988998015879998981133-3351-00234431003
Q 002581 313 --SENLQNIDLSYNHLSGPFPSWVT-SSLQ-MNLAVNNFTFD 350 (905)
Q Consensus 313 --~~~L~~LdLs~N~lsg~~p~~~~-~~l~-l~l~~N~~~~~ 350 (905)
+++|+.|||++|+|+|.+|.+.. ..++ +++++|++-|+
T Consensus 265 ~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred HCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf 479999989795883516689866679989788688950019
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-43 Score=234.64 Aligned_cols=161 Identities=25% Similarity=0.364 Sum_probs=125.4
Q ss_pred CCCCCCCCEEEEEEEECC---CCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC----
Q ss_conf 943544636199999179---939999991222--81038999999999950899991018739980996489973----
Q 002581 649 NKLGEGGYGPVYKGTLSD---GRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD---- 719 (905)
Q Consensus 649 ~~lG~G~fG~Vy~g~~~~---g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e---- 719 (905)
+.||+|+||+||+|.+.+ ++.||||++... .....++|.+|+++|++++|||||+++|+|.. +..++|||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCEEEEEECCCC
T ss_conf 7834587829999998169738599999988010898999999999999986799898527777505-977999974788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 171 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----C
T ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 96899975225789999999999999997668747955677761131023567512341345331343234432244567
Q ss_pred ---CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf ---8888233314988744742753234678672-999999999610211999999885139524332797888999999
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 795 (905)
Q Consensus 720 ---~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 795 (905)
+|||||.+.+..++.++|||||||++|||+| |+.||......+ +. .....+. .+..+ ..++
T Consensus 172 gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~---~~----~~i~~~~-----~~~~p---~~~~ 236 (277)
T d1xbba_ 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT----AMLEKGE-----RMGCP---AGCP 236 (277)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH----HHHHTTC-----CCCCC---TTCC
T ss_pred CCCEECCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHCCC-----CCCCC---CCCC
T ss_conf 78420391665379998434430340313289658999999989999---99----9998289-----99998---6567
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 999999998023899999998999999852
Q 002581 796 LRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 796 ~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 825 (905)
..+.+++..||+.+|++||||.+|+.+|+.
T Consensus 237 ~~~~~li~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 237 REMYDLMNLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHHHHHC
T ss_conf 999999999758897689098999998528
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-43 Score=233.83 Aligned_cols=170 Identities=23% Similarity=0.403 Sum_probs=130.1
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEC-CCC----EEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 59997894354463619999917-993----9999991222-81038999999999950899991018739980996489
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGR----VIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLL 716 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~-~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~L 716 (905)
.+|...++||+|+||+||+|.+. +|+ .||||++... .....++|.+|+.++++++|||||+++|+|.+....++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v 88 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 88 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf 99978319820899299999995899889899999996513497999999999999986799888158999961983699
Q ss_pred EEC-----------------------------------------------------------------------------
Q ss_conf 973-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
+++
T Consensus 89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 168 (317)
T d1xkka_ 89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168 (317)
T ss_dssp EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--
T ss_pred EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCEEEECCCCCEECCCCCCCC
T ss_conf 98426874010111334579999999999999999999987695047621203116799875860255222335444532
Q ss_pred ---------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf ---------8888233314988744742753234678672-999999999610211999999885139524332797888
Q 002581 720 ---------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTE 789 (905)
Q Consensus 720 ---------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 789 (905)
.|||||++.++.++.++|||||||++|||+| |+.|++.....+ +... ...+. .+.
T Consensus 169 ~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~----i~~~~-----~~~--- 233 (317)
T d1xkka_ 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGE-----RLP--- 233 (317)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHH----HHHTC-----CCC---
T ss_pred CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHCCC-----CCC---
T ss_conf 23651058644670887469998356544079999999977999999999899---9999----97599-----899---
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 99999999999999802389999999899999985273
Q 002581 790 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 790 ~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
.+..+...+..++.+||+.+|.+||||.||+..|....
T Consensus 234 ~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 234 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 98556899999999847899346919999999999987
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=237.51 Aligned_cols=178 Identities=24% Similarity=0.402 Sum_probs=137.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCEEEEEEEEC------CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf 99987159997894354463619999917------9939999991222-8103899999999995089999101873998
Q 002581 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709 (905)
Q Consensus 637 ~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~ 709 (905)
+|+...++|...+.||+|+||+||+|.+. +++.||||+++.. .......|.+|++++++++|||||+++|+|.
T Consensus 14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 93 (308)
T d1p4oa_ 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 93 (308)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred CEEECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 00426899188359820788189999987864477896899999870128689999999999999769998841254784
Q ss_pred ECCEEEEEEC----------------------------------------------------------------------
Q ss_conf 0996489973----------------------------------------------------------------------
Q 002581 710 EGARRLLVYD---------------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~~~~~Lv~e---------------------------------------------------------------------- 719 (905)
.....++|+|
T Consensus 94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred CCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECCCCEEE
T ss_conf 28810677760489988999875033211344468879999999999999999987647965432867754035996499
Q ss_pred --------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHH
Q ss_conf --------------------------8888233314988744742753234678672999-9999996102119999998
Q 002581 720 --------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRA-NSDNSLDTEKIYLLEWAWN 772 (905)
Q Consensus 720 --------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~-p~~~~~~~~~~~l~~~~~~ 772 (905)
.|+|||.+.++.++.++||||||+++|||+||+. |+......+ +...
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~------~~~~ 247 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ------VLRF 247 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH------HHHH
T ss_pred EEECCCCEECCCCCCEEECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHH------HHHH
T ss_conf 9424542023577630313402316323788887369988333444378999999968999999989999------9999
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 851395243327978889999999999999980238999999989999998527367
Q 002581 773 LHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 773 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~~ 829 (905)
. ..+.. + ..+..+...+.+++.+||+.+|++||||.+|+++|+...++
T Consensus 248 i-~~~~~-----~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~ 295 (308)
T d1p4oa_ 248 V-MEGGL-----L---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 295 (308)
T ss_dssp H-HTTCC-----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred H-HHCCC-----C---CCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCC
T ss_conf 9-80888-----8---88633539999999997577965893999999997876177
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-43 Score=231.97 Aligned_cols=167 Identities=27% Similarity=0.384 Sum_probs=128.9
Q ss_pred CCCCCCCCCEEEEEEEECC----CCEEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC-CEEEEEEC--
Q ss_conf 8943544636199999179----939999991222-810389999999999508999910187399809-96489973--
Q 002581 648 SNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG-ARRLLVYD-- 719 (905)
Q Consensus 648 ~~~lG~G~fG~Vy~g~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~-~~~~Lv~e-- 719 (905)
.++||+|+||+||+|.+.+ ...||||+++.. .....++|.+|+++|++++|||||+++|+|.+. ...++|||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEE
T ss_conf 66981368809999999779987999999998843697899999999999986789998678678980699438999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~ 191 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191 (311)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred ECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCEEEECCCCHHHCCCCCCCCCEEC
T ss_conf 06741442101345404899999999988765200336762577668757677999889910652322556655531002
Q ss_pred -------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf -------8888233314988744742753234678672999999999610211999999885139524332797888999
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|+|||++.++.++.|+||||||+++|||+||+.|+....... .+..++. .+. .+..+.
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~~i~----~g~-----~~~~p~--- 257 (311)
T d1r0pa_ 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL----QGR-----RLLQPE--- 257 (311)
T ss_dssp TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHH----TTC-----CCCCCT---
T ss_pred CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH----CCC-----CCCCCC---
T ss_conf 56555645567688743799974574661999999997899998889999--9999998----089-----889964---
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 999999999998023899999998999999852736
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 793 ~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
.+...+.+++.+||+.+|++||+|.||++.|+...+
T Consensus 258 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~ 293 (311)
T d1r0pa_ 258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293 (311)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 475999999999768897689399999999999997
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=234.79 Aligned_cols=166 Identities=24% Similarity=0.366 Sum_probs=130.5
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC-CEEEEEEC-
Q ss_conf 1599978943544636199999179939999991222810389999999999508999910187399809-96489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG-ARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~-~~~~Lv~e- 719 (905)
.++|...+.||+|+||.||+|.+. |+.||||+++.. ...++|.+|++++++++|||||+++|+|.+. ...++|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHEEEEEEEECCCCEEEEEEEEC-CEEEEEEEECCH--HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEC
T ss_conf 899488579820798089999999-909999998857--77999999999998678989854987887238928999963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~ 162 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 162 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCCCEEECCCCCCEECCCCCCCCCC
T ss_conf 69998999987457888899999999999985232113376553666567601468997763245600344787765566
Q ss_pred --CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf --8888233314988744742753234678672-9999999996102119999998851395243327978889999999
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 --~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|+|||++.++.++.++|||||||++|||+| |+.|+...... .+..++. .+ ..+.+.. ....
T Consensus 163 ~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~~~i~----~~-----~~~~~~~---~~~~ 227 (262)
T d1byga_ 163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVE----KG-----YKMDAPD---GCPP 227 (262)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHHHT----TT-----CCCCCCT---TCCH
T ss_pred CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHHHH----CC-----CCCCCCC---CCCH
T ss_conf 646778178727988858877757999999997899999999999---9999998----08-----9999976---5799
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 99999998023899999998999999852
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 797 ~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 825 (905)
++.+++.+||+.||.+||||.+++++|+.
T Consensus 228 ~~~~li~~cl~~dP~~Rps~~~l~~~L~~ 256 (262)
T d1byga_ 228 AVYEVMKNCWHLDAAMRPSFLQLREQLEH 256 (262)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 99999999756697689399999999999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-43 Score=231.09 Aligned_cols=172 Identities=23% Similarity=0.357 Sum_probs=132.8
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEC-CCC--EEEEEECCCC-CCCCHHHHHHHHHHHHHC-CCCCCCEEEEEEEECCEEEEE
Q ss_conf 59997894354463619999917-993--9999991222-810389999999999508-999910187399809964899
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS-DGR--VIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~-~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~~~~~Lv 717 (905)
++|...++||+|+||+||+|.+. ++. .||||++... .....++|.+|+++|+++ +|||||+++|+|.+.+..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEE
T ss_conf 99688779820788289999998999699999999782338579999999999998622899883678888418736999
Q ss_pred EC------------------------------------------------------------------------------
Q ss_conf 73------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~ 169 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 169 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEC
T ss_conf 98028986999986403555551231012345789999999999999999876630895455505204898688763874
Q ss_pred ---------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf ---------------------88882333149887447427532346786729999-99999610211999999885139
Q 002581 720 ---------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRAN-SDNSLDTEKIYLLEWAWNLHENN 777 (905)
Q Consensus 720 ---------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p-~~~~~~~~~~~l~~~~~~~~~~~ 777 (905)
.|+|||.+..+.++.++|||||||++|||+||+.| +......+ +.+. ...+
T Consensus 170 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~---~~~~----i~~~ 242 (309)
T d1fvra_ 170 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEK----LPQG 242 (309)
T ss_dssp CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHH----GGGT
T ss_pred CCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHHC
T ss_conf 34432244422345530137755553875269999622153138899999836899999999999---9999----9826
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 5243327978889999999999999980238999999989999998527367
Q 002581 778 QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 829 (905)
Q Consensus 778 ~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~~ 829 (905)
..+.... ....++.+++.+||+.+|++||||.||++.|+...+.
T Consensus 243 -----~~~~~~~---~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 243 -----YRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp -----CCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -----CCCCCCC---CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf -----8888876---6789999999997678966894999999999999861
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-43 Score=235.00 Aligned_cols=171 Identities=22% Similarity=0.378 Sum_probs=133.8
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEEEECC-C-----CEEEEEECCCC-CCCCHHHHHHHHHHHHHC-CCCCCCEEEEEEEEC
Q ss_conf 871599978943544636199999179-9-----39999991222-810389999999999508-999910187399809
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLSD-G-----RVIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLYGCCIEG 711 (905)
Q Consensus 640 ~~t~~~~~~~~lG~G~fG~Vy~g~~~~-g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~~ 711 (905)
...++|...++||+|+||+||+|+... + ..||||++... .......|.+|+.+|.++ +|||||+++|+|.+.
T Consensus 34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 77899397019830788199999985788554204999999663358789999999999999715899686877888629
Q ss_pred CEEEEEEC------------------------------------------------------------------------
Q ss_conf 96489973------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~Lv~e------------------------------------------------------------------------ 719 (905)
+..++|+|
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~ 193 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHH
T ss_conf 95899997279995999998625777510221000012220012577899999999999999999997399050527032
Q ss_pred -------------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCC
Q ss_conf -------------------------------------8888233314988744742753234678672-99999999961
Q 002581 720 -------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDT 761 (905)
Q Consensus 720 -------------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~ 761 (905)
+|||||++.++.++.++|||||||++|||+| |+.||......
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~ 273 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 14434598289851422220457786156234357876578388727999963303000399999983899999998989
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 021199999988513952433279788899999999999999802389999999899999985
Q 002581 762 EKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLA 824 (905)
Q Consensus 762 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~ 824 (905)
+. +. .....+ ..+..+. .+...+.+++.+||+.+|++||||+||+++|.
T Consensus 274 ~~--~~----~~~~~~-----~~~~~p~---~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 274 AN--FY----KLIQNG-----FKMDQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HH--HH----HHHHTT-----CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH--HH----HHHHCC-----CCCCCCC---CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99--99----998569-----9899887---67899999999975889668939999999974
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=235.08 Aligned_cols=184 Identities=22% Similarity=0.415 Sum_probs=138.1
Q ss_pred CCCCCHH-HHHHHHCCCCCCCCCCCCCCEEEEEEEE------CCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHC-CCCC
Q ss_conf 9854999-9998715999789435446361999991------799399999912228-10389999999999508-9999
Q 002581 630 PNTFSYA-ELRSATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRN 700 (905)
Q Consensus 630 ~~~~~~~-~l~~~t~~~~~~~~lG~G~fG~Vy~g~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~n 700 (905)
+..+++. .++...++|...++||+|+||.||+|++ .++..||||+++... .....+|.+|+.+++++ +|||
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn 88 (311)
T d1t46a_ 9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88 (311)
T ss_dssp TTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred CCCCCCCCCCCCCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 54489840263778996985498206882999999806644778869999998742487799999999999876269998
Q ss_pred CCEEEEEEEECCEEEEEEC-------------------------------------------------------------
Q ss_conf 1018739980996489973-------------------------------------------------------------
Q 002581 701 LVRLYGCCIEGARRLLVYD------------------------------------------------------------- 719 (905)
Q Consensus 701 iv~l~g~~~~~~~~~Lv~e------------------------------------------------------------- 719 (905)
||+++|+|.+....++|+|
T Consensus 89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivH 168 (311)
T d1t46a_ 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168 (311)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 87899898319978999973799879999985356654444453322233458899999999999999999887579266
Q ss_pred -------------------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCC-C
Q ss_conf -------------------------------------------88882333149887447427532346786729999-9
Q 002581 720 -------------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRAN-S 755 (905)
Q Consensus 720 -------------------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p-~ 755 (905)
.|+|||++.++.++.++|||||||++|||+|++.| +
T Consensus 169 rDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~ 248 (311)
T d1t46a_ 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248 (311)
T ss_dssp SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCEEEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 62410210000257521023401023367886158620135968767788617999974001025899999985899887
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 999961021199999988513952433279788899999999999999802389999999899999985273
Q 002581 756 DNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 756 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
......+. +.. ....+ ..+..... ....+.+++.+||+.+|.+||||.||+++|++.+
T Consensus 249 ~~~~~~~~--~~~----~i~~~-----~~~~~~~~---~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 249 PGMPVDSK--FYK----MIKEG-----FRMLSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp TTCCSSHH--HHH----HHHHT-----CCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCHHHH--HHH----HHHCC-----CCCCCCCC---CCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 78998999--999----98668-----98898543---6599999999975779657929999999998765
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=225.03 Aligned_cols=167 Identities=21% Similarity=0.358 Sum_probs=133.0
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 15999789435446361999991-7993999999122281038999999999950899991018739980996489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
.++|...+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 98 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEE
T ss_conf 10538878981285829999999899989999998430172799999999999867999880585779889998999970
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~g 178 (293)
T d1yhwa1 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178 (293)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCCCCCCCC
T ss_conf 37980898864159999999999999999999999879722677688868878996864251564132136664444444
Q ss_pred --CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --888823331498874474275323467867299999999961021199999988513952433279788899999999
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|||||++.+..++.++||||+||++|||+||+.||......+.. ......+. .+.... ......
T Consensus 179 t~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~~~~~~~----~~~~~~---~~~s~~ 245 (293)
T d1yhwa1 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL------YLIATNGT----PELQNP---EKLSAI 245 (293)
T ss_dssp CGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHHCS----CCCSSG---GGSCHH
T ss_pred CCCCCCHHHHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHH------HHHHHCCC----CCCCCC---CCCCHH
T ss_conf 77736826644799880120313729999980488998997999999------99985799----988885---537999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 999999802389999999899999
Q 002581 798 VIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 798 ~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
+..++.+||+.+|++|||+.|+++
T Consensus 246 ~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 246 FRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 999999986699668909999964
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-43 Score=231.78 Aligned_cols=172 Identities=20% Similarity=0.356 Sum_probs=133.1
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEEEECC----CCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 871599978943544636199999179----9399999912228-10389999999999508999910187399809964
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLSD----GRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 640 ~~t~~~~~~~~lG~G~fG~Vy~g~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
...++|...+.||+|+||.||+|.... +..||||+++... ....+.|.+|+++|++++|||||+++|+|.+ +..
T Consensus 4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 82 (273)
T d1mp8a_ 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 82 (273)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSC
T ss_pred CCHHHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEE
T ss_conf 6889969877993078829999999369964499999993656687999999999999986899998569889953-747
Q ss_pred EEEEC---------------------------------------------------------------------------
Q ss_conf 89973---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~Lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCEEECCCHHHEECCCCC
T ss_conf 99998406980776542247899999999999999877523022674414102655320678967876503421336776
Q ss_pred -----------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf -----------8888233314988744742753234678672-9999999996102119999998851395243327978
Q 002581 720 -----------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 -----------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|+|||++.+..++.++|||||||++|||+| |+.|+......+ +...+ ..+.. +.+
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~~i----~~~~~-----~~~ 230 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENGER-----LPM 230 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTTCC-----CCC
T ss_pred CEECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH---HHHHH----HCCCC-----CCC
T ss_conf 2330540058310326675169988745244424789999826999988899999---99999----81899-----989
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 8899999999999999802389999999899999985273
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 788 ~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
+..+...+.+++..||+.+|++||||.||++.|+...
T Consensus 231 ---~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 231 ---PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf ---8777999999999976879768929999999999997
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-42 Score=225.53 Aligned_cols=167 Identities=20% Similarity=0.308 Sum_probs=131.3
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 15999789435446361999991-7993999999122281038999999999950899991018739980996489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
.+.|...+.||+|+||+||+|.. .+++.||||++........+.|.+|+++|++++|||||+++|++.+.+..++|||
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC
T ss_conf 03759847993077819999999999939999998728999999999999999867999988498898009958999962
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCCCCCCCCC
T ss_conf 79981889998628999999999999999999999998898871407003148789998997161230357786410010
Q ss_pred ----CCCCHHHHC-----CCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ----888823331-----49887447427532346786729999999996102119999998851395243327978889
Q 002581 720 ----GYLAPEYAM-----RGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEF 790 (905)
Q Consensus 720 ----~y~APE~~~-----~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 790 (905)
.|||||++. ...|+.|+|||||||++|||+||+.||......+.. . .... +.. +.+. .
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~---~---~i~~-~~~-----~~~~-~ 237 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL---L---KIAK-SEP-----PTLA-Q 237 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH---H---HHHH-SCC-----CCCS-S
T ss_pred CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH---H---HHHC-CCC-----CCCC-C
T ss_conf 256264799998320257888880665787899999982088999998999999---9---9970-799-----8777-6
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 9999999999999802389999999899999
Q 002581 791 NDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 791 ~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
+......+..++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 238 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 5669999999999976699668919999962
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-42 Score=228.68 Aligned_cols=164 Identities=21% Similarity=0.331 Sum_probs=128.1
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CEEEEE
Q ss_conf 5999789435446361999991-79939999991222--810389999999999508999910187399809--964899
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG--ARRLLV 717 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~--~~~~Lv 717 (905)
++|...+.||+|+||+||+|.. .+|+.||||++... .....+.|.+|++++++++|||||++++++.+. ...++|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
T ss_conf 33799679830889199999999999799999987465797999999999999997789998248999991789989999
Q ss_pred EC------------------------------------------------------------------------------
Q ss_conf 73------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
||
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECCCEEE
T ss_conf 95689993899998515457899999999999999999999997167788788586765425747888579800100032
Q ss_pred ---------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---------------88882333149887447427532346786729999999996102119999998851395243327
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 ---------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
+|||||++.+..++.|+|||||||++|||+||+.||......+ +. .....+...
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~---~~----~~i~~~~~~---- 232 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LA----GKIREGKFR---- 232 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH----HHHHHTCCC----
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHH---HH----HHHHCCCCC----
T ss_conf 2457775566778823279999839999938988752789999801889989989999---99----999718998----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 9788899999999999999802389999999899999
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.++.. ....+.+++.+||+.+|.+|||+.|+++
T Consensus 233 -~~~~~---~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 233 -RIPYR---YSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp -CCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCC---CCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf -89743---5999999999976799557918999972
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=9.9e-42 Score=225.25 Aligned_cols=168 Identities=23% Similarity=0.309 Sum_probs=133.3
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 15999789435446361999991-7993999999122281038999999999950899991018739980996489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
-++|...+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..++|||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 65758988984076819999998899989999998452431699999999999867997999299999989999999985
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCCCCCCE
T ss_conf 79988999997623789999999999999999999975697600015467364168898699954521044256543200
Q ss_pred -----CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCHH
Q ss_conf -----88882333149887447427532346786729999999996102119999998851395243327978-889999
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDK 793 (905)
Q Consensus 720 -----~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~ 793 (905)
.|||||++.+..++.++||||+||++|||+||+.||......+. .. .... +.. ..++.. ...+
T Consensus 185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~---~i~~-~~~--~~~~~~~~~~s-- 253 (350)
T d1koaa2 185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---LR---NVKS-CDW--NMDDSAFSGIS-- 253 (350)
T ss_dssp ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH---HHHH-TCC--CSCCGGGGGCC--
T ss_pred ECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH---HH---HHHH-CCC--CCCCCCCCCCC--
T ss_conf 0686242188997589987267655465999999859899899799999---99---9984-788--98942235899--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99999999998023899999998999999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
..+..++.+|++.||++|||+.|+++.
T Consensus 254 --~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 254 --EDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp --HHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred --HHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --999999999756896679089998629
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-41 Score=225.18 Aligned_cols=179 Identities=20% Similarity=0.312 Sum_probs=132.3
Q ss_pred HHCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 715999789435446361999991-799399999912228-103899999999995089999101873998099648997
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 641 ~t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~ 718 (905)
..++|...+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+.+|++++|||||+++++|.+....++|+
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 75688897897127780999999989996999999875409789999999999998679999994999999899999999
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 76799868998742499999999999999999999999859997144577994687899899954877625678862111
Q ss_pred ----CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHH-HHHHHHH--------CCC--------
Q ss_conf ----8888233314988744742753234678672999999999610211999-9998851--------395--------
Q 002581 720 ----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLE-WAWNLHE--------NNQ-------- 778 (905)
Q Consensus 720 ----~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~-~~~~~~~--------~~~-------- 778 (905)
.|||||++.+..|+.++||||+||+++||+||+.||......+...... ....... ...
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 37714119468758998948889989999999998889989988789999998875177545774212333221111222
Q ss_pred ------CC-------CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf ------24-------33279788899999999999999802389999999899999
Q 002581 779 ------SL-------GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 779 ------~~-------~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.. ....+.+.. ......+.++..+|++.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCB--TTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 354134778876650268766764--448999999999986899467908999960
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.2e-41 Score=223.45 Aligned_cols=165 Identities=22% Similarity=0.421 Sum_probs=128.0
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 15999789435446361999991-7993999999122281---0389999999999508999910187399809964899
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv 717 (905)
...|+..+.||+|+||+||+|.. .+++.||||++..... ...+.|.+|+.+|++++|||||+++|++.+....++|
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf 78567627970188809999999899939999998444435889999999999999977899982389999989988999
Q ss_pred EC------------------------------------------------------------------------------
Q ss_conf 73------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 98069994578997379999999999999999999999868976667884217987999789844365334677873134
Q ss_pred --CCCCHHHHCC---CCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCHH
Q ss_conf --8888233314---9887447427532346786729999999996102119999998851395243327978-889999
Q 002581 720 --GYLAPEYAMR---GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDK 793 (905)
Q Consensus 720 --~y~APE~~~~---~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~ 793 (905)
+|||||++.+ +.|+.++|||||||++|||+||+.||......+. ...... +. .+.+ ....
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~------~~~i~~-~~-----~~~~~~~~~-- 239 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-NE-----SPALQSGHW-- 239 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHH-SC-----CCCCSCTTS--
T ss_pred CCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHH-CC-----CCCCCCCCC--
T ss_conf 7663688998346788867214545589999999878899999799999------999982-89-----998887888--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 9999999999802389999999899999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
...+..++.+||+.+|.+|||+.|+++
T Consensus 240 -s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 240 -SEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf -999999999977379657918999971
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.6e-41 Score=223.14 Aligned_cols=169 Identities=20% Similarity=0.302 Sum_probs=131.5
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 15999789435446361999991-799399999912228-1038999999999950899991018739980996489973
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e 719 (905)
.+.|...+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+|++++|||||++++++.+.+..++|+|
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 66669988994065839999999999989999998157731289999999999986799899919899998998889885
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 167 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167 (307)
T ss_dssp CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECCCCCEEE
T ss_conf 26898488865303678878999999999999875241305568704630011046888249983154358725897044
Q ss_pred ------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf ------88882333149887447427532346786729999999996102119999998851395243327978889999
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||.+.+..|+.++||||+||++|||+||+.||......+ +...+ ..+.. ....+.....+
T Consensus 168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~~i----~~~~~-~~~~~~~~~~s-- 237 (307)
T d1a06a_ 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFEQI----LKAEY-EFDSPYWDDIS-- 237 (307)
T ss_dssp -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHH----HTTCC-CCCTTTTTTSC--
T ss_pred EEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHH----HCCCC-CCCCCCCCCCC--
T ss_conf 0032842259188737999807873451599999985979999989999---99998----61687-77876666789--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99999999998023899999998999999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
..+..++.+|++.+|++|||+.|+++.
T Consensus 238 --~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 238 --DSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp --HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --HHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --999999999760897579189998629
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-42 Score=226.94 Aligned_cols=168 Identities=24% Similarity=0.422 Sum_probs=128.2
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEC--CC--CEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
Q ss_conf 59997894354463619999917--99--39999991222---8103899999999995089999101873998099648
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLS--DG--RVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRL 715 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~--~g--~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~ 715 (905)
++|...+.||+|+||+||+|.+. ++ ..||||++... .....++|.+|+.+|++++|||||+++|+|.+. ..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred HHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC-CHH
T ss_conf 8919978980388839999999889990799999999835557989999999999999868999987898777401-001
Q ss_pred EEEC----------------------------------------------------------------------------
Q ss_conf 9973----------------------------------------------------------------------------
Q 002581 716 LVYD---------------------------------------------------------------------------- 719 (905)
Q Consensus 716 Lv~e---------------------------------------------------------------------------- 719 (905)
+|+|
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~ 166 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred EEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCCCEEECCCHHHHHCCCCCC
T ss_conf 14654238612544421268999999999999999999875217875205668881565565433256115553035887
Q ss_pred ------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf ------------8888233314988744742753234678672-999999999610211999999885139524332797
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 ------------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||.+.+..++.++|||||||++|||+| |+.||......+ ...++ ...+ ..+.
T Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~---~~~~i---~~~~-----~~~~ 235 (273)
T d1u46a_ 167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---ILHKI---DKEG-----ERLP 235 (273)
T ss_dssp EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHH---HTSC-----CCCC
T ss_pred CCEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHH---HHCC-----CCCC
T ss_conf 52654763257310799998379999421566148999999968999999969999---99999---8479-----9999
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 888999999999999998023899999998999999852
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825 (905)
Q Consensus 787 l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 825 (905)
.. ......+.+++..||+.+|++||||.||...|..
T Consensus 236 ~~---~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~ 271 (273)
T d1u46a_ 236 RP---EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271 (273)
T ss_dssp CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC---CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 85---4453999999999768896679299999999996
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-41 Score=221.22 Aligned_cols=163 Identities=26% Similarity=0.403 Sum_probs=130.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 5999789435446361999991-79939999991222---8103899999999995089999101873998099648997
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~ 718 (905)
++|...+.||+|+||+||+|.. .+++.||||++... .....+.+.+|++++++++|||||++++++.+....++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 37699889851778589999998999499999981688567689999999999998568888885999999899989998
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 165 (263)
T d2j4za1 86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 165 (263)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETT
T ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCEEECCCCEEEECCCCCCCCCC
T ss_conf 50479858988750489999999999999999999999889465220234414668998711555633544888523557
Q ss_pred ---CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ---88882333149887447427532346786729999999996102119999998851395243327978889999999
Q 002581 720 ---GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 796 (905)
Q Consensus 720 ---~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 796 (905)
.|||||.+.+..++.++|||||||++|||+||+.||......+ +. .....+ ++.+++... .
T Consensus 166 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~----~~i~~~------~~~~p~~~s---~ 229 (263)
T d2j4za1 166 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TY----KRISRV------EFTFPDFVT---E 229 (263)
T ss_dssp EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH----HHHHTT------CCCCCTTSC---H
T ss_pred CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHCC------CCCCCCCCC---H
T ss_conf 8876349999758998931440467599999832999988899999---99----999718------999986689---9
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 9999999802389999999899999
Q 002581 797 RVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 797 ~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.+..+..+|++.+|++|||+.|+++
T Consensus 230 ~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 230 GARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 9999999976479768909999971
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-41 Score=224.09 Aligned_cols=168 Identities=18% Similarity=0.234 Sum_probs=130.6
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC------CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 15999789435446361999991-799399999912228------10389999999999508999910187399809964
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS------HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
.+.|...+.||+|+||+||+|.. .+|+.||||++.... ....+.|.+|+.+|++++|||||++++++.+....
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 56779827981178959999999999989999998756632134068999999999999867998999388999979989
Q ss_pred EEEEC---------------------------------------------------------------------------
Q ss_conf 89973---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~Lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~ 168 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168 (293)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred EEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCEEECCHHHHHHCC
T ss_conf 99998677864310010356421557899999999998766625422113330127982589866646964334421057
Q ss_pred ------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf ------------88882333149887447427532346786729999999996102119999998851395243327978
Q 002581 720 ------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL 787 (905)
Q Consensus 720 ------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 787 (905)
.|||||++.+..++.++|||||||++|||+||+.||......+. ... ....... ..+..
T Consensus 169 ~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~---~~~----i~~~~~~--~~~~~ 239 (293)
T d1jksa_ 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LAN----VSAVNYE--FEDEY 239 (293)
T ss_dssp TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHH----HHTTCCC--CCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH---HHH----HHHCCCC--CCCHH
T ss_conf 77631224777743099998189999766522140999999708899889999999---999----9816888--87010
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 8899999999999999802389999999899999
Q 002581 788 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 ~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.. .....+.+++.+||+.+|++|||+.|+++
T Consensus 240 ~~---~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 240 FS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC---CCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 47---88999999999986389668919999961
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.9e-41 Score=222.91 Aligned_cols=168 Identities=20% Similarity=0.268 Sum_probs=132.9
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 15999789435446361999991-7993999999122281038999999999950899991018739980996489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
.+.|...+.||+|+||+||+|.. .+|+.||||++........+.+.+|+++|++++|||||++++++.+....++|||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 40359989993177829999999899979999998872646799999999999867997989199999989999999982
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~ 187 (352)
T d1koba_ 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 187 (352)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCEEE
T ss_conf 89980888898638998999999999999999999997792651314455311346788489952563034378872010
Q ss_pred -----CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCHH
Q ss_conf -----88882333149887447427532346786729999999996102119999998851395243327978-889999
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDK 793 (905)
Q Consensus 720 -----~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~ 793 (905)
.|||||++.+..++.++||||+||++|||+||+.||......+ +...+ ..+.. . ..... ...+
T Consensus 188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~~~~i----~~~~~-~-~~~~~~~~~s-- 256 (352)
T d1koba_ 188 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---TLQNV----KRCDW-E-FDEDAFSSVS-- 256 (352)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHH----HHCCC-C-CCSSTTTTSC--
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHH----HHCCC-C-CCCCCCCCCC--
T ss_conf 047645348999747998976333898999999996889989979999---99999----84788-9-8930024799--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99999999998023899999998999999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
..+.+++.+|++.+|.+|||+.|+++.
T Consensus 257 --~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 257 --PEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --HHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --999999999756996689189999609
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-42 Score=225.50 Aligned_cols=173 Identities=22% Similarity=0.366 Sum_probs=133.8
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEEEEC--------CCCEEEEEECCCCC-CCCHHHHHHHHHHHHHC-CCCCCCEEEEEEE
Q ss_conf 87159997894354463619999917--------99399999912228-10389999999999508-9999101873998
Q 002581 640 SATKDFDPSNKLGEGGYGPVYKGTLS--------DGRVIAVKQLSIAS-HQGKNQFVNEIATISAV-QHRNLVRLYGCCI 709 (905)
Q Consensus 640 ~~t~~~~~~~~lG~G~fG~Vy~g~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~ 709 (905)
...++|...+.||+|+||.||+|... ++..||||+++... .....++.+|+..+.++ +|||||+++|+|.
T Consensus 10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 25899697009851678289999985787555667549999998811286889999999999998139996973465220
Q ss_pred ECCEEEEEEC----------------------------------------------------------------------
Q ss_conf 0996489973----------------------------------------------------------------------
Q 002581 710 EGARRLLVYD---------------------------------------------------------------------- 719 (905)
Q Consensus 710 ~~~~~~Lv~e---------------------------------------------------------------------- 719 (905)
+....++|||
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEC
T ss_conf 18868999973699909999986067764322233457434679999999999999999876637978630221022454
Q ss_pred --------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHH-CCCCCCCCCCCCHHHH
Q ss_conf --------------------------------8888233314988744742753234678672-9999999996102119
Q 002581 720 --------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYL 766 (905)
Q Consensus 720 --------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~t-g~~p~~~~~~~~~~~l 766 (905)
+|+|||++.++.|+.|+|||||||++|||+| |+.|+......+ +
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~---~ 246 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L 246 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---H
T ss_pred CCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH---H
T ss_conf 7897676221110113555554314667888466326675179888255547758888874017989899999999---9
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 9999988513952433279788899999999999999802389999999899999985273
Q 002581 767 LEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 767 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
. .....+. .+..+.. ....+.+++.+||+.+|.+||||.||+++|+..+
T Consensus 247 ~----~~i~~~~-----~~~~p~~---~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 247 F----KLLKEGH-----RMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp H----HHHHTTC-----CCCCCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHHCCC-----CCCCCCC---CHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 9----9997288-----8898743---5299999999976679767939999999998886
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-41 Score=224.54 Aligned_cols=177 Identities=19% Similarity=0.257 Sum_probs=127.1
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHH--HHHHHHCCCCCCCEEEEEEEECC----EEEE
Q ss_conf 59997894354463619999917993999999122281038999999--99995089999101873998099----6489
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNE--IATISAVQHRNLVRLYGCCIEGA----RRLL 716 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E--~~~l~~~~H~niv~l~g~~~~~~----~~~L 716 (905)
+.|...+.||+|+||.||+|++ +|+.||||+++.. ..+++.+| +..+.+++|||||+++|+|.+.+ ..++
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l 78 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred CEEEEEEEEEECCCEEEEEEEE-CCEEEEEEEECCC---CHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
T ss_conf 6899988982078819999999-9989999998720---04679999999999627998683268899837986048999
Q ss_pred EEC-----------------------------------------------------------------------------
Q ss_conf 973-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCCCCCC
T ss_conf 99646698989998658999899999999999999998876652046898661531731357868877688763866234
Q ss_pred ------------------CCCCHHHHCCC------CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCH----H----HHH
Q ss_conf ------------------88882333149------887447427532346786729999999996102----1----199
Q 002581 720 ------------------GYLAPEYAMRG------HLTEKADVFSFGVVALEVISGRANSDNSLDTEK----I----YLL 767 (905)
Q Consensus 720 ------------------~y~APE~~~~~------~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~----~----~l~ 767 (905)
+|||||++... .++.|+|||||||++|||+||+.|+........ . ...
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred CCCCCCEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHH
T ss_conf 67776200135525035476782210565454677767501220159999999628998876631124101225564309
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 99998851395243327978889--9999999999999802389999999899999985273
Q 002581 768 EWAWNLHENNQSLGLVDPTLTEF--NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 768 ~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
....... ..+..+|.+... ..+....+.+++.+||+.+|++||||.||+++|+...
T Consensus 239 ~~~~~~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 239 EEMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHH----HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 9999987----502468887765577689999999999976069858959999999999888
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-41 Score=222.13 Aligned_cols=167 Identities=23% Similarity=0.388 Sum_probs=128.1
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 15999789435446361999991-799399999912228-1038999999999950899991018739980996489973
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e 719 (905)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....++|.+|++++++++|||||++++++.+....++|||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEE
T ss_conf 74608998972174809999999999979999998456641279999999999985799888469654046743679886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~ 163 (271)
T d1nvra_ 84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 163 (271)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCCCCCC
T ss_conf 45898089997537999999999999999999999997598357546899788789987983231422404688653111
Q ss_pred ------CCCCHHHHCCCCC-CCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf ------8888233314988-744742753234678672999999999610211999999885139524332797888999
Q 002581 720 ------GYLAPEYAMRGHL-TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 ------~y~APE~~~~~~~-t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|||||++.+..+ +.++||||+||++|||+||+.||......... ...+ ..... ..+.....+
T Consensus 164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~-~~~~-----~~~~~---~~~~~~~~s- 233 (271)
T d1nvra_ 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW-----KEKKT---YLNPWKKID- 233 (271)
T ss_dssp CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH-HHHH-----HTTCT---TSTTGGGSC-
T ss_pred CEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHH-HHHH-----HCCCC---CCCCCCCCC-
T ss_conf 3255747428728618999997101617379999998299788889859999-9998-----63888---788644699-
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99999999999802389999999899999
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 793 ~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
..+.+++.+|++.+|++|||+.|+++
T Consensus 234 ---~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 234 ---SAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp ---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---HHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf ---99999999976799668909999961
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.7e-40 Score=216.76 Aligned_cols=172 Identities=22% Similarity=0.241 Sum_probs=131.1
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC---CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC----E
Q ss_conf 15999789435446361999991-799399999912228---103899999999995089999101873998099----6
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS---HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA----R 713 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~----~ 713 (905)
.++|...+.||+|+||+||+|.. .+++.||||++.... ....+.|.+|++++++++|||||++++++.... .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCE
T ss_conf 62069868996089929999999999989999998556646989999999999999856999887311435432688766
Q ss_pred EEEEEC--------------------------------------------------------------------------
Q ss_conf 489973--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~Lv~e-------------------------------------------------------------------------- 719 (905)
.++|||
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~ 165 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred EEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCC
T ss_conf 99999778898710112035899999999999999999999985795276346755665754320100344432212354
Q ss_pred -------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf -------------8888233314988744742753234678672999999999610211999999885139524332797
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|||||.+.+..++.++||||+||++|||+||+.||......+ ........+... ...
T Consensus 166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~~~~~~~~~---~~~ 236 (277)
T d1o6ya_ 166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIP---PSA 236 (277)
T ss_dssp -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCC---GGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHH------HHHHHHHCCCCC---CCH
T ss_conf 43333464257624369999839999966320265289999976979989969999------999998469999---710
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHC
Q ss_conf 8889999999999999980238999999-98999999852
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRP-PMSRVVAMLAG 825 (905)
Q Consensus 787 l~~~~~~~~~~~~~i~~~C~~~~p~~RP-sm~ev~~~L~~ 825 (905)
.... ....+.++..+|++.+|++|| |++++...|..
T Consensus 237 ~~~~---~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 237 RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp TSSS---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HCCC---CCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHH
T ss_conf 0347---899999999998667976777399999999999
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-40 Score=219.31 Aligned_cols=164 Identities=15% Similarity=0.181 Sum_probs=130.2
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 5999789435446361999991-79939999991222---8103899999999995089999101873998099648997
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~ 718 (905)
++|...+.||+|+||+||+|.. .+++.||||++... .....+.+.+|+++|++++|||||++++++.+....++|+
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEE
T ss_conf 87789889850879099999998999799999986577557778999999999998768888617999999899889999
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~ 167 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred ECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCC
T ss_conf 70489877776531599999999999999999997621650884767741236688853886032102422567764333
Q ss_pred -------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf -------8888233314988744742753234678672999999999610211999999885139524332797888999
Q 002581 720 -------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 792 (905)
Q Consensus 720 -------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 792 (905)
.|||||++.+..++.++||||+||++|||+||+.||......+ +. .....+. ..++....
T Consensus 168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~----~~i~~~~------~~~p~~~s 234 (288)
T d1uu3a_ 168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL---IF----QKIIKLE------YDFPEKFF 234 (288)
T ss_dssp --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHTTC------CCCCTTCC
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHH---HH----HHHHCCC------CCCCCCCC
T ss_conf 55567755258440026898966623045699999803889989959999---99----9997189------99985479
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999999999998023899999998999999
Q 002581 793 KEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 793 ~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
..+.+++.+|++.+|.+|||++|+...
T Consensus 235 ---~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 235 ---PKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp ---HHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred ---HHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf ---999999999855797689197897377
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=213.73 Aligned_cols=162 Identities=19% Similarity=0.309 Sum_probs=121.6
Q ss_pred CCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE----CCEEEEEE
Q ss_conf 9789435446361999991-79939999991222--81038999999999950899991018739980----99648997
Q 002581 646 DPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIE----GARRLLVY 718 (905)
Q Consensus 646 ~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~----~~~~~Lv~ 718 (905)
...+.||+|+||+||+|.. .++..||||++... .....+.|.+|+++|++++|||||+++|++.. ....++||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEEE
T ss_conf 85169700828499999999999599999985122798999999999999985799985069999840334588899999
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~ 171 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 171 (270)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred ECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCCCCEEEEECCCCEECCCCCCC
T ss_conf 57898948999751355469999999999999999999789979968767435116679998898005765423687667
Q ss_pred ------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf ------88882333149887447427532346786729999999996102119999998851395243327978889999
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||.+.+ .++.++|||||||++|||+||+.||........ +. .....+.. .+.+.....
T Consensus 172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~~----~~i~~~~~----~~~~~~~~~- 239 (270)
T d1t4ha_ 172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IY----RRVTSGVK----PASFDKVAI- 239 (270)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HH----HHHTTTCC----CGGGGGCCC-
T ss_pred CCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH--HH----HHHHCCCC----CCCCCCCCC-
T ss_conf 7553813008988478-999867110079999999878899987655999--99----99973899----865675578-
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 9999999999802389999999899999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.++.+++.+||+.+|++|||+.|+++
T Consensus 240 --~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 240 --PEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp --HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf --99999999976379758929999967
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-38 Score=208.92 Aligned_cols=171 Identities=16% Similarity=0.240 Sum_probs=125.2
Q ss_pred CCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC--
Q ss_conf 89435446361999991-79939999991222810-----38999999999950899991018739980996489973--
Q 002581 648 SNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQ-----GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD-- 719 (905)
Q Consensus 648 ~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e-- 719 (905)
.++||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred CEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHH
T ss_conf 63851272829999999999969999998420212456799999999999998679999868985422587402204553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~g 162 (299)
T d1ua2a_ 83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV 162 (299)
T ss_dssp SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCC
T ss_pred CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf 45077655412667789999999999999998863163550357762588537784114657610005787554330204
Q ss_pred --CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH---CCCCCCCC-------CCC
Q ss_conf --88882333149-887447427532346786729999999996102119999998851---39524332-------797
Q 002581 720 --GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHE---NNQSLGLV-------DPT 786 (905)
Q Consensus 720 --~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~-------d~~ 786 (905)
.|||||.+..+ .++.++||||+||++|||+||+.||......+.. ..+..... ........ ...
T Consensus 163 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ua2a_ 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL---TRIFETLGTPTEEQWPDMCSLPDYVTFKS 239 (299)
T ss_dssp CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred CHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHH---HHHHHHCCCCCHHHCCCHHCCCHHHHHCC
T ss_conf 733363999726778880564363042899998596999999999999---99998518997254521000213443034
Q ss_pred CCCCCH-----HHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 888999-----99999999999802389999999899999
Q 002581 787 LTEFND-----KEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 787 l~~~~~-----~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
....+. .....+.++..+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 7898867856568999999999976389456908999967
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-40 Score=216.63 Aligned_cols=181 Identities=22% Similarity=0.362 Sum_probs=135.1
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC------CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHC-CCCCCCEEE
Q ss_conf 99999987159997894354463619999917------9939999991222-810389999999999508-999910187
Q 002581 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLS------DGRVIAVKQLSIA-SHQGKNQFVNEIATISAV-QHRNLVRLY 705 (905)
Q Consensus 634 ~~~~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~~-~H~niv~l~ 705 (905)
...+++...++|...+.||+|+||.||+|... +++.||||++... .....+.|.+|...+.++ +|+|||.++
T Consensus 4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~ 83 (299)
T d1ywna1 4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 83 (299)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCCCCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 98252616799798449841678399999986777555783999999860017178999999999988614998499741
Q ss_pred EEEEECC-EEEEEEC-----------------------------------------------------------------
Q ss_conf 3998099-6489973-----------------------------------------------------------------
Q 002581 706 GCCIEGA-RRLLVYD----------------------------------------------------------------- 719 (905)
Q Consensus 706 g~~~~~~-~~~Lv~e----------------------------------------------------------------- 719 (905)
++|.+.+ ..++|+|
T Consensus 84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~ 163 (299)
T d1ywna1 84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 163 (299)
T ss_dssp EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred EEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 15404797579999845899299999853666665322202332146899999999999999999887379717867731
Q ss_pred -------------------------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCC-CCCCCCCC
Q ss_conf -------------------------------------8888233314988744742753234678672999-99999961
Q 002581 720 -------------------------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRA-NSDNSLDT 761 (905)
Q Consensus 720 -------------------------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~-p~~~~~~~ 761 (905)
.|||||++.++.++.++|||||||++|||+||+. |+......
T Consensus 164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~ 243 (299)
T d1ywna1 164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 243 (299)
T ss_dssp GEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred CEEECCCCCEEECCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 06577998289845752001135665222475166721020368646889966322136789999986889999899989
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 0211999999885139524332797888999999999999998023899999998999999852736
Q 002581 762 EKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 762 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
+. .......+. .+.+++. ...++.+++.+||+.+|++||||.||+++|+..++
T Consensus 244 ~~------~~~~~~~~~-----~~~~~~~---~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 244 EE------FCRRLKEGT-----RMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HH------HHHHHHHTC-----CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH------HHHHHHCCC-----CCCCCCC---CCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 99------999996389-----8888865---78999999999767796679199999999979986
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-38 Score=208.48 Aligned_cols=163 Identities=22% Similarity=0.300 Sum_probs=128.7
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 5999789435446361999991-79939999991222---8103899999999995089999101873998099648997
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~ 718 (905)
++|...+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+.++++++|||||++++++.+.+..++|+
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCEEEEEE
T ss_conf 47088889720768089999998999799999984577548899999999999998636967533035685288005676
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G 163 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG 163 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf 50378632234322221110079999999987655412476770556810503868998898317521671245643457
Q ss_pred --CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --888823331498874474275323467867299999999961021199999988513952433279788899999999
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|||||.+.+..++.++||||+||++|||+||+.||......+. .. . ...+. ..++.... ..
T Consensus 164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~-i~~~~------~~~p~~~s---~~ 227 (316)
T d1fota_ 164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YE---K-ILNAE------LRFPPFFN---ED 227 (316)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH---H-HHHCC------CCCCTTSC---HH
T ss_pred CCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHH---HH---H-HHCCC------CCCCCCCC---HH
T ss_conf 6343599998389998043046533368999759899999699999---99---9-97089------88997789---99
Q ss_pred HHHHHHHHCCCCCCCCC-----CHHHHHH
Q ss_conf 99999980238999999-----9899999
Q 002581 798 VIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 798 ~~~i~~~C~~~~p~~RP-----sm~ev~~ 821 (905)
+..+..+|++.+|.+|+ |++++++
T Consensus 228 ~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 228 VKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHHCHHHCCCCCHHHHHHHHC
T ss_conf 99999999544997666431021999981
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-38 Score=207.59 Aligned_cols=177 Identities=21% Similarity=0.355 Sum_probs=130.5
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 5999789435446361999991-799399999912228--1038999999999950899991018739980996489973
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e 719 (905)
++|...+.||+|+||+||+|+. .+++.||||++.... ....+++.+|+++|++++|||||++++++.+....++|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEE
T ss_conf 99776517723768099999999999799999980222575899999999999986799838874453322432037886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~ 161 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTC
T ss_pred ECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCEECCCCCCEECCCCCCCCEE
T ss_conf 23774455544202568888999999999999999865288992135711401134676210357861343688641001
Q ss_pred -----CCCCHHHHCCCC-CCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH---HCCCCCCCC-----CC
Q ss_conf -----888823331498-8744742753234678672999999999610211999999885---139524332-----79
Q 002581 720 -----GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLH---ENNQSLGLV-----DP 785 (905)
Q Consensus 720 -----~y~APE~~~~~~-~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~-----d~ 785 (905)
.|+|||...... ++.++||||+||++|||+||+.||......+.... ..... .+....... ..
T Consensus 162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T d1gz8a_ 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR---IFRTLGTPDEVVWPGVTSMPDYKP 238 (298)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred ECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH---HHHHCCCCCHHHCCCCCCCCCCCC
T ss_conf 03652154112213665777422103333134279668799898899999999---998328983331444222421243
Q ss_pred CCC---CCC-----HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 788---899-----9999999999998023899999998999999
Q 002581 786 TLT---EFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 786 ~l~---~~~-----~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
... ... ......+.++..+|++.+|.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 454322220444166789999999999763995579189999678
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-38 Score=207.47 Aligned_cols=164 Identities=24% Similarity=0.255 Sum_probs=129.8
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 15999789435446361999991-79939999991222---810389999999999508999910187399809964899
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv 717 (905)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+|++++|||||++++++.+....++|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 47428988983176849999999899989999998156544979999999999999867999887787640356421110
Q ss_pred EC------------------------------------------------------------------------------
Q ss_conf 73------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~ 163 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 00357986055553256775999999999996521134315962246477784765899888820565200356786205
Q ss_pred ------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf ------88882333149887447427532346786729999999996102119999998851395243327978889999
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|||||++.+..|+.++||||+||++|||+||+.||......+ +.. ....+. ..++....
T Consensus 164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~---~~~----~i~~~~------~~~p~~~s- 229 (337)
T d1o6la_ 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFE----LILMEE------IRFPRTLS- 229 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCC------CCCCTTSC-
T ss_pred CCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHH---HHH----HHHCCC------CCCCCCCC-
T ss_conf 5100889966665048988833310223067889987899999969999---999----985289------98986689-
Q ss_pred HHHHHHHHHHHHCCCCCCCCCC-----HHHHHH
Q ss_conf 9999999999802389999999-----899999
Q 002581 794 EALRVIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPs-----m~ev~~ 821 (905)
..+..++..|++.+|.+||+ +.|+++
T Consensus 230 --~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 230 --PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --HHHHHHHHHHCCCCCHHHCCCCCCCHHHHHC
T ss_conf --9999999866638934422565234999972
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.4e-38 Score=205.91 Aligned_cols=167 Identities=22% Similarity=0.291 Sum_probs=123.8
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHH---HHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 15999789435446361999991-79939999991222---81038999999---9999508999910187399809964
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNE---IATISAVQHRNLVRLYGCCIEGARR 714 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E---~~~l~~~~H~niv~l~g~~~~~~~~ 714 (905)
-++|...++||+|+||.||+|+. .+|+.||||++... .......+.+| +.+++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
T ss_conf 77685101884288909999999999979999998458754266799999999999998508998588999999989988
Q ss_pred EEEEC---------------------------------------------------------------------------
Q ss_conf 89973---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~Lv~e--------------------------------------------------------------------------- 719 (905)
++|||
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~ 162 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 162 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCC
T ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCCCC
T ss_conf 99999148983899987325532789999999999999999977962204442216785889679822010233378864
Q ss_pred -------CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf -------88882333149-8874474275323467867299999999961021199999988513952433279788899
Q 002581 720 -------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFN 791 (905)
Q Consensus 720 -------~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 791 (905)
.|||||++..+ .|+.++||||+||++|||+||+.||......+...+. .... ...+.+....
T Consensus 163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~------~~~~~~~~~~ 232 (364)
T d1omwa3 163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTL------TMAVELPDSF 232 (364)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH----HHSS------SCCCCCCSSS
T ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HHCC------CCCCCCCCCC
T ss_conf 33113455421687603899984410467789999998599988889989999999----8604------6888788778
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHH
Q ss_conf 999999999999802389999999-----899999
Q 002581 792 DKEALRVIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 792 ~~~~~~~~~i~~~C~~~~p~~RPs-----m~ev~~ 821 (905)
.+ .+..++.+|++.+|.+||| +.|+++
T Consensus 233 s~---~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 233 SP---ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CH---HHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CH---HHHHHHHHHCCCCHHHHCCCCCCCHHHHHC
T ss_conf 99---999999998566988808874357999974
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.8e-38 Score=207.05 Aligned_cols=179 Identities=21% Similarity=0.354 Sum_probs=130.4
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 5999789435446361999991799399999912228--1038999999999950899991018739980996489973-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
++|...+.||+|+||+||+|..++|+.||||++.... ....+.|.+|+.+|++++|||||++++++......++++|
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCCEECCEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 99634318722778189999968999999999812326858999999999999867998687660120467731589974
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 161 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred EHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCCCCCCEEC
T ss_conf 00456789986047751445689999999999986057488267877505686899787323664301146765410102
Q ss_pred ---CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC---CC--CCCCC---
Q ss_conf ---88882333149-88744742753234678672999999999610211999999885139524---33--27978---
Q 002581 720 ---GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL---GL--VDPTL--- 787 (905)
Q Consensus 720 ---~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~---~~--~d~~l--- 787 (905)
.|+|||.+... .++.++||||+||+++||+||+.||......+...-+............. .. .+...
T Consensus 162 ~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T d1ob3a_ 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241 (286)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred CCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCC
T ss_conf 43110137887178888841002111758999977979989889899999999863899711042123332214333335
Q ss_pred -----CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf -----8899999999999999802389999999899999
Q 002581 788 -----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 788 -----~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
..........+..++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 676466651258999999999986689668909999856
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-38 Score=208.30 Aligned_cols=167 Identities=17% Similarity=0.266 Sum_probs=130.5
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC-
Q ss_conf 15999789435446361999991-7993999999122281038999999999950899991018739980996489973-
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e- 719 (905)
.++|...+.||+|+||+||+|.. .+++.||||++.... .....+.+|+++|++++|||||++++++.+.+..++|||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC
T ss_conf 010588789831778399999998999699999975786-6599999999999857997989098999889988999953
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~ 162 (321)
T d1tkia_ 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCCCCCCC
T ss_conf 89980889987538999999999999999999999987699751355444344378851899764411100346775321
Q ss_pred -----CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCHH
Q ss_conf -----88882333149887447427532346786729999999996102119999998851395243327978-889999
Q 002581 720 -----GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDK 793 (905)
Q Consensus 720 -----~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~ 793 (905)
.|+|||...+..++.++||||+||++|||+||+.||......+. .. .... +... ++... ...+
T Consensus 163 ~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~---~~---~i~~-~~~~--~~~~~~~~~s-- 231 (321)
T d1tkia_ 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI---IE---NIMN-AEYT--FDEEAFKEIS-- 231 (321)
T ss_dssp EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH---HHHH-TCCC--CCHHHHTTSC--
T ss_pred CCCCCCCCCCHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHH---HH---HHHH-CCCC--CCHHHCCCCC--
T ss_conf 2233222340210487778401130279999999828999999899999---99---9983-8999--8802236789--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99999999998023899999998999999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
..+.++..+|++.||.+|||+.|+++.
T Consensus 232 --~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 232 --IEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --HHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --999999999866996689099999639
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=209.20 Aligned_cols=163 Identities=20% Similarity=0.316 Sum_probs=127.1
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHH-HCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 5999789435446361999991-79939999991222---8103899999999995-08999910187399809964899
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATIS-AVQHRNLVRLYGCCIEGARRLLV 717 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~-~~~H~niv~l~g~~~~~~~~~Lv 717 (905)
++|...+.||+|+||+||+|+. .+++.||||+++.. .....+.+.+|..++. .++|||||++++++.++...++|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEE
T ss_conf 97188658940878289999999999899999980555338489999999999999847999687898897049831677
Q ss_pred EC------------------------------------------------------------------------------
Q ss_conf 73------------------------------------------------------------------------------
Q 002581 718 YD------------------------------------------------------------------------------ 719 (905)
Q Consensus 718 ~e------------------------------------------------------------------------------ 719 (905)
+|
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~ 161 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 161 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEECCCCCHHHHCCCCCCCCC
T ss_conf 75037980899864047899999999999999999999868934034765404444899630155530232356653345
Q ss_pred ------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf ------88882333149887447427532346786729999999996102119999998851395243327978889999
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 793 (905)
Q Consensus 720 ------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 793 (905)
.|+|||++.+..++.++||||+||++|||+||+.||......+ +. .....+ .+.++....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~----~~i~~~------~~~~p~~~s- 227 (320)
T d1xjda_ 162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LF----HSIRMD------NPFYPRWLE- 227 (320)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHC------CCCCCTTSC-
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HH----HHHHCC------CCCCCCCCC-
T ss_conf 4578777689999827998832320112278989873889999989999---99----999718------998975679-
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHH-HHHH
Q ss_conf 999999999980238999999989-9999
Q 002581 794 EALRVIGVALLCTQASPMMRPPMS-RVVA 821 (905)
Q Consensus 794 ~~~~~~~i~~~C~~~~p~~RPsm~-ev~~ 821 (905)
.++..+..+|++.+|++||++. ++++
T Consensus 228 --~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 228 --KEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp --HHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --HHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf --999999999654489878388999980
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-37 Score=204.69 Aligned_cols=163 Identities=19% Similarity=0.204 Sum_probs=128.2
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 5999789435446361999991-79939999991222---8103899999999995089999101873998099648997
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA---SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~ 718 (905)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+|++++|||||++++++......++|+
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
T ss_conf 37089889611768089999998999899999982677458899999999999999748772740344443222223222
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~G 200 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 200 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCCCEEEEECEEEEECCCCCCCCCC
T ss_conf 23346622666751589899999999999999899998599861767999936077897886101033322566643367
Q ss_pred --CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --888823331498874474275323467867299999999961021199999988513952433279788899999999
Q 002581 720 --GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 797 (905)
Q Consensus 720 --~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 797 (905)
.|||||++.+..++.++||||+||++|||+||+.||....... +...+ ..+. +...... ...
T Consensus 201 t~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~i----~~~~------~~~p~~~---s~~ 264 (350)
T d1rdqe_ 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IYEKI----VSGK------VRFPSHF---SSD 264 (350)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH----HHCC------CCCCTTC---CHH
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHH---HHHHH----HCCC------CCCCCCC---CHH
T ss_conf 635678899717998853311450078999975889989959999---99998----6179------8897668---999
Q ss_pred HHHHHHHHCCCCCCCCC-----CHHHHHH
Q ss_conf 99999980238999999-----9899999
Q 002581 798 VIGVALLCTQASPMMRP-----PMSRVVA 821 (905)
Q Consensus 798 ~~~i~~~C~~~~p~~RP-----sm~ev~~ 821 (905)
+..++..|++.||.+|+ |+.++++
T Consensus 265 ~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHHCHHHCCCCCCCCHHHHHC
T ss_conf 99999998340998606553454999971
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-38 Score=205.91 Aligned_cols=181 Identities=17% Similarity=0.204 Sum_probs=128.1
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC------
Q ss_conf 15999789435446361999991-79939999991222--8103899999999995089999101873998099------
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------ 712 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------ 712 (905)
.+.|...+.||+|+||+||+|.. .+|+.||||+++.. .....+.+.+|+++|++++|||||+++++|...+
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 77189988980177819999999999989999998522259699999999999998668987547999863576555541
Q ss_pred EEEEEEC-------------------------------------------------------------------------
Q ss_conf 6489973-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~Lv~e------------------------------------------------------------------------- 719 (905)
..++|+|
T Consensus 97 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~ 176 (346)
T d1cm8a_ 97 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT 176 (346)
T ss_dssp CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred EEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 59999840552189998740226999999999999999998737876456685111121001221134310220687631
Q ss_pred ------CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH-----HHC----------C
Q ss_conf ------88882333149-8874474275323467867299999999961021199999988-----513----------9
Q 002581 720 ------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL-----HEN----------N 777 (905)
Q Consensus 720 ------~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~-----~~~----------~ 777 (905)
.|+|||.+.+. .++.++||||+||+++||++|+.|+......+........... ... .
T Consensus 177 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (346)
T d1cm8a_ 177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256 (346)
T ss_dssp SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHC
T ss_conf 02455333588998178789965010300389999997869988897689999998503788488886530003443311
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 524332797888999999999999998023899999998999999
Q 002581 778 QSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 778 ~~~~~~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
...+.....+..........+.+++..|++.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 578666556677556899999999999772995579299999639
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-38 Score=207.71 Aligned_cols=181 Identities=21% Similarity=0.355 Sum_probs=123.9
Q ss_pred HHCCCCCCCCCCCCCCEEEEEEEE-CC-CCEEEEEECCCCC--CCCHHHHHHHHHHHHHC---CCCCCCEEEEEEEE---
Q ss_conf 715999789435446361999991-79-9399999912228--10389999999999508---99991018739980---
Q 002581 641 ATKDFDPSNKLGEGGYGPVYKGTL-SD-GRVIAVKQLSIAS--HQGKNQFVNEIATISAV---QHRNLVRLYGCCIE--- 710 (905)
Q Consensus 641 ~t~~~~~~~~lG~G~fG~Vy~g~~-~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~---~H~niv~l~g~~~~--- 710 (905)
+.++|...+.||+|+||+||+|.. .+ ++.||||++.... ......+.+|+.+|+.+ +|||||+++++|..
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 75897988899215586999999988899899999980232451679999999999998742589880236632214666
Q ss_pred --CCEEEEEEC---------------------------------------------------------------------
Q ss_conf --996489973---------------------------------------------------------------------
Q 002581 711 --GARRLLVYD--------------------------------------------------------------------- 719 (905)
Q Consensus 711 --~~~~~Lv~e--------------------------------------------------------------------- 719 (905)
....++++|
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCEEECCHHHHH
T ss_conf 66746999997405871444443037899989999999999999999975889835798627898589975421000101
Q ss_pred ---------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-----
Q ss_conf ---------------888823331498874474275323467867299999999961021199999988513952-----
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS----- 779 (905)
Q Consensus 720 ---------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~----- 779 (905)
.|||||++.+..|+.++||||+||++|||+||+.||......+....+............
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred HHCCCCCCCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCC
T ss_conf 10023457776548511483100179888111000328999999878799899898999999998407996110532111
Q ss_pred -C-CCC----CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf -4-332----79788899999999999999802389999999899999
Q 002581 780 -L-GLV----DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 780 -~-~~~----d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
. ... ..............+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 103330223456454404458999999999987489667918999966
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.1e-34 Score=188.05 Aligned_cols=266 Identities=22% Similarity=0.307 Sum_probs=208.5
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 10779995147546889800159999979987799899989521138955667751366588988612339987874763
Q 002581 52 CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131 (905)
Q Consensus 52 ~~i~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 131 (905)
|..+.++..+.+++ .+|..+. +.+++|+|++|+|+...+..|.++++|++|++++|.+....|..|.++++|++|++
T Consensus 10 c~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l 86 (305)
T d1xkua_ 10 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86 (305)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred ECCCEEEECCCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECC
T ss_conf 55999985599988-5198889--99798978499189869657604656523112344344523566527985578315
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCC--CCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 366588999923358777647780344778888612211676640002576256--889988777645782432255688
Q 002581 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT--GKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 132 s~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~ 209 (905)
++|+++ .+|..+ ...+..|.+..|.+....+..+.....+..++...|... ...+..+..+++|+.+++++|.+.
T Consensus 87 ~~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~ 163 (305)
T d1xkua_ 87 SKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 163 (305)
T ss_dssp CSSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCCCC-CCCCCH--HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 687567-676400--11132321024610234444540133110000123333346777642234565671203467745
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 87982235999998998028636778924340787544112225203588983347999989995668968766881113
Q 002581 210 GPIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLF 289 (905)
Q Consensus 210 ~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 289 (905)
. ++.. .+++|+.|++.++.........+..++.++.|++++|.+.+..+..+..+++|+.|+|++|.++ .+|..+.
T Consensus 164 ~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~ 239 (305)
T d1xkua_ 164 T-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 239 (305)
T ss_dssp S-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred C-CCCC--CCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCC
T ss_conf 1-6710--1776678989788677888267641341330154455332223454334433224302554002-4631103
Q ss_pred CCCCCCEEECCCCCCCCCCCCC--------CCCCCCEEEEECCCCC
Q ss_conf 9999979978688696679988--------8999889980158799
Q 002581 290 NIDSLNYLFLGNNSLSGTLPTQ--------KSENLQNIDLSYNHLS 327 (905)
Q Consensus 290 ~l~~L~~L~Ls~N~l~g~~p~~--------~~~~L~~LdLs~N~ls 327 (905)
.+++|++|+|++|+++..-... ....|+.|++++|.+.
T Consensus 240 ~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 240 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCCCCEEECCCCCCCCCCHHHCCCCCHHCCCCCCCEEECCCCCCC
T ss_conf 3467898989898657638100267210021588897889899576
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-37 Score=202.05 Aligned_cols=181 Identities=16% Similarity=0.235 Sum_probs=129.2
Q ss_pred HCCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC-------
Q ss_conf 15999789435446361999991-79939999991222--810389999999999508999910187399809-------
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------- 711 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------- 711 (905)
.++|...+.||+|+||+||+|.. .+|+.||||++... .....+++.+|+++|++++|+|++++++++...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf 27988999972274829999999899979999998422246378999999999999835999660676540246544445
Q ss_pred -CEEEEEEC-----------------------------------------------------------------------
Q ss_conf -96489973-----------------------------------------------------------------------
Q 002581 712 -ARRLLVYD----------------------------------------------------------------------- 719 (905)
Q Consensus 712 -~~~~Lv~e----------------------------------------------------------------------- 719 (905)
...++|+|
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~ 168 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 168 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCCCCEEEEECCEEEECC
T ss_conf 76389998535787410122203443308999999999999988522998856767222036689968763135002235
Q ss_pred -----------------CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf -----------------88882333149-887447427532346786729999999996102119999998851395243
Q 002581 720 -----------------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLG 781 (905)
Q Consensus 720 -----------------~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 781 (905)
.|+|||.+.+. .++.|+||||+||++|||+||+.||......+....+..............
T Consensus 169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (318)
T d3blha1 169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 248 (318)
T ss_dssp C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred CCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 54443211356602497874289970799989178700678646617448799899899999999998418998255344
Q ss_pred CCCCCC---------CCCCH-HH------HHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 327978---------88999-99------9999999998023899999998999999
Q 002581 782 LVDPTL---------TEFND-KE------ALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 782 ~~d~~l---------~~~~~-~~------~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
...... ..... +. ...+..++.+|++.||++|||++|++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp CCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 320344433201334455503340444599899999999873896589099999749
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-37 Score=200.39 Aligned_cols=179 Identities=20% Similarity=0.228 Sum_probs=130.4
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC------CE
Q ss_conf 5999789435446361999991-79939999991222--810389999999999508999910187399809------96
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------AR 713 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------~~ 713 (905)
++|...++||+|+||+||+|.. .+|+.||||++... ......++.+|+.++++++|||||++++++... ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCE
T ss_conf 77599889621758599999999999899999988233697999999999999986489876489989702564345762
Q ss_pred EEEEEC--------------------------------------------------------------------------
Q ss_conf 489973--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~Lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~ 176 (355)
T d2b1pa1 97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 176 (355)
T ss_dssp EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred EEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCC
T ss_conf 69998414467787650389999999999999999988652211245677632113654431320102321146665533
Q ss_pred ------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHH----------------HHHHHHHCC
Q ss_conf ------8888233314988744742753234678672999999999610211999----------------999885139
Q 002581 720 ------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLE----------------WAWNLHENN 777 (905)
Q Consensus 720 ------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~----------------~~~~~~~~~ 777 (905)
.|+|||++.+..++.++||||+||+++||++|+.||...........+. .........
T Consensus 177 ~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (355)
T d2b1pa1 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256 (355)
T ss_dssp ----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTS
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 22146555581331477778774333566257898659899888977889999997205898799987656677776417
Q ss_pred C-C-----CCCCCCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 5-2-----43327978----8899999999999999802389999999899999
Q 002581 778 Q-S-----LGLVDPTL----TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 778 ~-~-----~~~~d~~l----~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
. . ...+.... ..........+.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 543566642126433354321013337999999999987699457908999966
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=8.3e-34 Score=185.06 Aligned_cols=80 Identities=26% Similarity=0.334 Sum_probs=48.7
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 07799951475468898001599999799877998999895211389556677513665889886123399878747633
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~i~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 132 (905)
+++.|++.+++++.. +.+..+++|++|++++|++++.. .++++++|++|++++|.+.+. + .++++++|+.|+++
T Consensus 45 ~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~~ 118 (384)
T d2omza2 45 QVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTLF 118 (384)
T ss_dssp TCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECC
T ss_pred CCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCC
T ss_conf 878998999898776--24245899998968188179886--334771101030134333222-2-11123343334433
Q ss_pred CCCCCC
Q ss_conf 665889
Q 002581 133 NNNFSG 138 (905)
Q Consensus 133 ~N~l~~ 138 (905)
+|.++.
T Consensus 119 ~~~~~~ 124 (384)
T d2omza2 119 NNQITD 124 (384)
T ss_dssp SSCCCC
T ss_pred CCCCCC
T ss_conf 222222
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-37 Score=202.24 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=122.9
Q ss_pred HCCCCCC-CCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC-CCCCCCEEEEEEEE----CCEE
Q ss_conf 1599978-9435446361999991-79939999991222810389999999999508-99991018739980----9964
Q 002581 642 TKDFDPS-NKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAV-QHRNLVRLYGCCIE----GARR 714 (905)
Q Consensus 642 t~~~~~~-~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~-~H~niv~l~g~~~~----~~~~ 714 (905)
.++|... ++||+|+||+||+|.. .+++.||||+++. ...+.+|++++.++ +|||||++++++.+ ....
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEE
T ss_conf 14879810796545486999999889998999999897-----4779999999998669999782989995034689789
Q ss_pred EEEEC---------------------------------------------------------------------------
Q ss_conf 89973---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~Lv~e--------------------------------------------------------------------------- 719 (905)
++|+|
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 99997789984999998627877579999999999999999999769864441002201135555663113545512333
Q ss_pred -------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf -------------8888233314988744742753234678672999999999610211999999885139524332797
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|||||++.+..|+.++||||+||++|||+||+.||......... ..... .+....
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~---~~~~~--------~i~~~~ 233 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---PGMKT--------RIRMGQ 233 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------------CCCSCS
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHH---HHHHH--------HHHCCC
T ss_conf 6888643226775637927774898888888876451677886588998898877889---99999--------985388
Q ss_pred --CCCC-CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf --8889-99999999999998023899999998999999
Q 002581 787 --LTEF-NDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 787 --l~~~-~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
++.. ......++..++.+|++.+|++|||+.|++..
T Consensus 234 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 234 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp SSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 888985434699999999999756996579099999709
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=9.1e-37 Score=200.07 Aligned_cols=167 Identities=19% Similarity=0.271 Sum_probs=127.4
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCC---------CCHHHHHHHHHHHHHCC-CCCCCEEEEEEEEC
Q ss_conf 5999789435446361999991-7993999999122281---------03899999999995089-99910187399809
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH---------QGKNQFVNEIATISAVQ-HRNLVRLYGCCIEG 711 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~ 711 (905)
++|...+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+.++++++ |||||++++++.+.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred CCCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 63888528841768499999999999899999996244641147888999999999999999850799747997621467
Q ss_pred CEEEEEEC------------------------------------------------------------------------
Q ss_conf 96489973------------------------------------------------------------------------
Q 002581 712 ARRLLVYD------------------------------------------------------------------------ 719 (905)
Q Consensus 712 ~~~~Lv~e------------------------------------------------------------------------ 719 (905)
+..++|+|
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHEEECCC
T ss_conf 60599997689866899998659999999999999999999999875994323462548986899838712403167268
Q ss_pred -----------CCCCHHHHCC------CCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf -----------8888233314------98874474275323467867299999999961021199999988513952433
Q 002581 720 -----------GYLAPEYAMR------GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGL 782 (905)
Q Consensus 720 -----------~y~APE~~~~------~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 782 (905)
.|+|||++.+ ..++.++||||+||+++||+||+.||......+. ......+.. +.
T Consensus 163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-------~~~i~~~~~-~~ 234 (277)
T d1phka_ 163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------LRMIMSGNY-QF 234 (277)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHTCC-CC
T ss_pred CCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHHHH-------HHHHHHCCC-CC
T ss_conf 8721345246788898886053445678899233185656023103228889889999999-------999981898-88
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 279788899999999999999802389999999899999
Q 002581 783 VDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 783 ~d~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
..+.....+ .++.+++.+|++.+|++|||+.||++
T Consensus 235 ~~~~~~~~s----~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 235 GSPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp CTTTGGGSC----HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCC----HHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 985434689----99999999976589668919999973
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.5e-36 Score=196.54 Aligned_cols=174 Identities=16% Similarity=0.164 Sum_probs=127.6
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEE-EEEEEECCEEEEEEC-
Q ss_conf 5999789435446361999991-7993999999122281038999999999950899991018-739980996489973-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL-YGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l-~g~~~~~~~~~Lv~e- 719 (905)
++|...+.||+|+||+||+|.. .+++.||||++.... ...++.+|++++++++|+|+|.. .++..+....++|+|
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHC--CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEE
T ss_conf 88999689850788099999998899899999972100--5888999999999703899601799999519877899987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~ 164 (299)
T d1ckia_ 85 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164 (299)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB
T ss_pred CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCC
T ss_conf 38713332443068876899999999999999999979944266787660643357776156504675134255445541
Q ss_pred -------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHH-HHHHHHHHCCCCCCCCCC
Q ss_conf -------------888823331498874474275323467867299999999961021199-999988513952433279
Q 002581 720 -------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL-EWAWNLHENNQSLGLVDP 785 (905)
Q Consensus 720 -------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~d~ 785 (905)
.|||||.+.+..++.++|||||||++|||+||+.||............ .+...... .. .+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~-~~-----~~ 238 (299)
T d1ckia_ 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TP-----IE 238 (299)
T ss_dssp CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH-SC-----HH
T ss_pred EECCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC-CC-----HH
T ss_conf 0001357767873532999991899898321886177899998498766553057799999985235678-98-----35
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 788899999999999999802389999999899999985273
Q 002581 786 TLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827 (905)
Q Consensus 786 ~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~ 827 (905)
.+.. ..+.++.+++..||+.+|++||++.++.+.|+...
T Consensus 239 ~~~~---~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 239 VLCK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp HHTT---TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred HHCC---CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 7534---78899999999984399557919999999999999
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-37 Score=202.52 Aligned_cols=157 Identities=20% Similarity=0.350 Sum_probs=122.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCC------CCHHHHHHHHHHHHHCC--CCCCCEEEEEEEECCE
Q ss_conf 5999789435446361999991-7993999999122281------03899999999995089--9991018739980996
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASH------QGKNQFVNEIATISAVQ--HRNLVRLYGCCIEGAR 713 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~~~--H~niv~l~g~~~~~~~ 713 (905)
++|...+.||+|+||+||+|.. .+|+.||||++..... ....++.+|+.++++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
T ss_conf 83799679840878399999999999799999985688443345567999999999999743589881279999830996
Q ss_pred EEEEEC--------------------------------------------------------------------------
Q ss_conf 489973--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~Lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCEECCC
T ss_conf 89999833686228999861589999999999999999999998779755667611147744788489775465353244
Q ss_pred ----------CCCCHHHHCCCCC-CCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf ----------8888233314988-74474275323467867299999999961021199999988513952433279788
Q 002581 720 ----------GYLAPEYAMRGHL-TEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPTLT 788 (905)
Q Consensus 720 ----------~y~APE~~~~~~~-t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 788 (905)
.|||||++.+..+ +.++||||+||++|||+||+.||... + .. . .+. ..++
T Consensus 164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~---~--~i-------~-~~~------~~~~ 224 (273)
T d1xwsa_ 164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---E--EI-------I-RGQ------VFFR 224 (273)
T ss_dssp SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---H--HH-------H-HCC------CCCS
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCC---H--HH-------H-HCC------CCCC
T ss_conf 45566565877479999848997886533255403453675688998873---6--77-------6-154------4778
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 899999999999999802389999999899999
Q 002581 789 EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 789 ~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
....+ ++.+++.+|++.||++|||++|+++
T Consensus 225 ~~~s~---~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 225 QRVSS---ECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp SCCCH---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCH---HHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 77999---9999999976089758939999853
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-35 Score=194.19 Aligned_cols=177 Identities=20% Similarity=0.311 Sum_probs=128.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 5999789435446361999991-799399999912228--1038999999999950899991018739980996489973
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIAS--HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~~~~Lv~e 719 (905)
++|...+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+.++++++|+|||++++++......++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEE
T ss_conf 99786269712868199999999999699999980321786899999999999985675788821354444431158863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~ 161 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCEEE
T ss_conf 02332221121235654036789999999999877433998600146761211337826652046011046887510010
Q ss_pred ----CCCCHHHHCCCC-CCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC---CCC---CCCCC----
Q ss_conf ----888823331498-874474275323467867299999999961021199999988513---952---43327----
Q 002581 720 ----GYLAPEYAMRGH-LTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHEN---NQS---LGLVD---- 784 (905)
Q Consensus 720 ----~y~APE~~~~~~-~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~---~~~~d---- 784 (905)
.|+|||.+.... ++.++||||+||+++||+||+.|+........ ...-+...... ... ....+
T Consensus 162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T d1unla_ 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred CCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHH--HHHHHHHHCCCCCHHHHHHHHHCCCCCCC
T ss_conf 3443101466750698888044402654188998518999988999999--99999861189973551344322211334
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf ------9788899999999999999802389999999899999
Q 002581 785 ------PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 785 ------~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.............+.++..+|++.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 4454431043306568999999999986499668909999964
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-34 Score=188.14 Aligned_cols=222 Identities=23% Similarity=0.267 Sum_probs=139.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC-CCCC
Q ss_conf 951475468898001599999799877998999895211389556677513665889886123399878747633-6658
Q 002581 58 RVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA-NNNF 136 (905)
Q Consensus 58 ~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls-~N~l 136 (905)
...+.+++ .+|..+. ..+++|+|++|+|+.+.+..|.++++|++|++++|.+....+..+.++..++.+... .|.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred ECCCCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84799989-4497889--99888977488179879778641421300001344543321112122222222222210223
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 89999233587776477803447788886122116766400025762568899887776457824322556888798223
Q 002581 137 SGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSL 216 (905)
Q Consensus 137 ~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 216 (905)
....+..|.++++|++|+++.|.+....+..+....+|+.+++.+|.++...+..|..+++|+.|++++|.+....+..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~- 172 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA- 172 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT-
T ss_pred CCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHH-
T ss_conf 5446201010102778756885443201353320001211020014314458057404340502231417656625666-
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 59999989980286367789243407875441122252035889833479999899956689687668811139999979
Q 002581 217 SKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNY 296 (905)
Q Consensus 217 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 296 (905)
+.++++|+++++.+|.+++..|..|..+++|+.|++++|.+.+..+..+..+++|++
T Consensus 173 -----------------------f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~ 229 (284)
T d1ozna_ 173 -----------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (284)
T ss_dssp -----------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred -----------------------HCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf -----------------------546563413142114346628167665320002333335221000002355465688
Q ss_pred EECCCCCCCC
Q ss_conf 9786886966
Q 002581 297 LFLGNNSLSG 306 (905)
Q Consensus 297 L~Ls~N~l~g 306 (905)
|++++|.+..
T Consensus 230 L~l~~N~l~C 239 (284)
T d1ozna_ 230 LRLNDNPWVC 239 (284)
T ss_dssp EECCSSCEEC
T ss_pred EEECCCCCCC
T ss_conf 9811998878
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-36 Score=196.44 Aligned_cols=181 Identities=17% Similarity=0.197 Sum_probs=126.0
Q ss_pred HCCCCCCCCCCCCCCEEEEEEE-ECCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC-----EE
Q ss_conf 1599978943544636199999-1799399999912228-103899999999995089999101873998099-----64
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIAS-HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA-----RR 714 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~-~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~-----~~ 714 (905)
+.+|...+.||+|+||+||+|+ ..+|+.||||++.... ....+.+++|+++|++++|||+|++++++.... ..
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEE
T ss_conf 89859978994064809999999999949999998031095899999999999997689898858889950564554149
Q ss_pred EEEEC---------------------------------------------------------------------------
Q ss_conf 89973---------------------------------------------------------------------------
Q 002581 715 LLVYD--------------------------------------------------------------------------- 719 (905)
Q Consensus 715 ~Lv~e--------------------------------------------------------------------------- 719 (905)
+++++
T Consensus 87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~ 166 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 166 (345)
T ss_dssp EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred EEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCCC
T ss_conf 99996259865664405899999999999999999999997898677787643788799977875457056504777641
Q ss_pred ----------CCCCHHHHCC-CCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC--------CC
Q ss_conf ----------8888233314-9887447427532346786729999999996102119999998851395--------24
Q 002581 720 ----------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ--------SL 780 (905)
Q Consensus 720 ----------~y~APE~~~~-~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~--------~~ 780 (905)
.|+|||.+.. ..++.++||||+||+++||+||+.||......+................ ..
T Consensus 167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T d1pmea_ 167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246 (345)
T ss_dssp CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHH
T ss_pred EEECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 01011026520003878604788874101004670133776697997888889999987652069975664234332222
Q ss_pred C--CCCCCCCCCCH-----HHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 3--32797888999-----999999999998023899999998999999
Q 002581 781 G--LVDPTLTEFND-----KEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 781 ~--~~d~~l~~~~~-----~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
. ...+.....+. ....++..+...|++.||.+|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 0244677557787778378999999999999764895679089998619
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=189.74 Aligned_cols=224 Identities=21% Similarity=0.194 Sum_probs=151.9
Q ss_pred EEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEC-CC
Q ss_conf 99877998999895211389556677513665889886123399878747633665889999233587776477803-44
Q 002581 80 FLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID-SC 158 (905)
Q Consensus 80 ~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~-~n 158 (905)
.++.++..++ .+|..+. +.+++|+|++|.|+...+..|.++++|++|++++|.+....+..+..+..+..+... .+
T Consensus 15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEECCCCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9984799989-4497889--998889774881798797786414213000013445433211121222222222222102
Q ss_pred CCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 77888861221167664000257625688998877764578243225568887982235999998998028636778924
Q 002581 159 GASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLD 238 (905)
Q Consensus 159 ~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 238 (905)
.+....+..|.++++|+.|++++|.+....+..+....+|+.++++.|.++...+.
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~------------------------ 147 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD------------------------ 147 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT------------------------
T ss_pred CCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHH------------------------
T ss_conf 23544620101010277875688544320135332000121102001431445805------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC--CCCCCC
Q ss_conf 340787544112225203588983347999989995668968766881113999997997868869667998--889998
Q 002581 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPT--QKSENL 316 (905)
Q Consensus 239 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~L 316 (905)
.+..+++|+.|++++|.++...+..|.++++|+.+++++|++++..|..|..+++|++|++++|.+.+..+. ....+|
T Consensus 148 ~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L 227 (284)
T d1ozna_ 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 74043405022314176566256665465634131421143466281676653200023333352210000023554656
Q ss_pred CEEEEECCCCCCCC
Q ss_conf 89980158799989
Q 002581 317 QNIDLSYNHLSGPF 330 (905)
Q Consensus 317 ~~LdLs~N~lsg~~ 330 (905)
+.|++++|.+....
T Consensus 228 ~~L~l~~N~l~C~C 241 (284)
T d1ozna_ 228 QYLRLNDNPWVCDC 241 (284)
T ss_dssp CEEECCSSCEECSG
T ss_pred CEEEECCCCCCCCC
T ss_conf 88981199887875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-35 Score=192.25 Aligned_cols=174 Identities=21% Similarity=0.282 Sum_probs=121.8
Q ss_pred CCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC------EEEE
Q ss_conf 999789435446361999991-799399999912228103899999999995089999101873998099------6489
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGA------RRLL 716 (905)
Q Consensus 644 ~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~~------~~~L 716 (905)
.|...++||+|+||+||+|+. .+|+.||||++..... .+.+|+++|++++|+|||++++++.... ..++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCH----HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf 76751698217683999999999997999999881606----89999999986689898738789974476577318999
Q ss_pred EEC-----------------------------------------------------------------------------
Q ss_conf 973-----------------------------------------------------------------------------
Q 002581 717 VYD----------------------------------------------------------------------------- 719 (905)
Q Consensus 717 v~e----------------------------------------------------------------------------- 719 (905)
|+|
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~ 176 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCC
T ss_conf 98416886078888631036899999999999999999999986687645788603787358971167336605440477
Q ss_pred ----------CCCCHHHHCC-CCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHH--------HHHHHCCCCC
Q ss_conf ----------8888233314-98874474275323467867299999999961021199999--------9885139524
Q 002581 720 ----------GYLAPEYAMR-GHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWA--------WNLHENNQSL 780 (905)
Q Consensus 720 ----------~y~APE~~~~-~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~--------~~~~~~~~~~ 780 (905)
.|+|||.+.+ ..++.++||||+||++|||+||+.||......+....+... +..... ...
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~-~~~ 255 (350)
T d1q5ka_ 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP-NYT 255 (350)
T ss_dssp SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC----
T ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC-CHH
T ss_conf 6532002555556827764046888210002465277855028799898799999999999748981776543062-101
Q ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 3327978------88999999999999998023899999998999999
Q 002581 781 GLVDPTL------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAM 822 (905)
Q Consensus 781 ~~~d~~l------~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 822 (905)
+..-+.. ..........+..++.+|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 103554456744443156899999999999765895579299999669
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.7e-32 Score=177.41 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=107.8
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 07799951475468898001599999799877998999895211389556677513665889886123399878747633
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~i~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 132 (905)
.++.|++.++.++...+..|..+++|++|++++|.+....|..|.++++|++|++++|.++ .+|..+ ...|+.|++.
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~~ 108 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVH 108 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEECC
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCC-CCCCCH--HHHHHHHHCC
T ss_conf 9798978499189869657604656523112344344523566527985578315687567-676400--1113232102
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCC--CCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 66588999923358777647780344778--8886122116766400025762568899887776457824322556888
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGAS--GEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQG 210 (905)
Q Consensus 133 ~N~l~~~~p~~l~~L~~L~~L~L~~n~l~--~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 210 (905)
.|.+....+..+.....+..+....|... ...+..+..+++|+.+++.+|.+.. ++..+ .++|+.|++++|....
T Consensus 109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~~ 185 (305)
T d1xkua_ 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKITK 185 (305)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCCE
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC--CCCCCEEECCCCCCCC
T ss_conf 46102344445401331100001233333467776422345656712034677451-67101--7766789897886778
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC---
Q ss_conf 79822359999989980286367789243407875441122252035889833479999899956689687668811---
Q 002581 211 PIPSSLSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRT--- 287 (905)
Q Consensus 211 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--- 287 (905)
..+..+..++.++.|++++|.+.......+.++++|++|+|++|.++ .+|..+..+++|+.|++++|+++..-...
T Consensus 186 ~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~ 264 (305)
T d1xkua_ 186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 264 (305)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCHHHCCC
T ss_conf 88267641341330154455332223454334433224302554002-46311033467898989898657638100267
Q ss_pred ---CCCCCCCCEEECCCCCCC
Q ss_conf ---139999979978688696
Q 002581 288 ---LFNIDSLNYLFLGNNSLS 305 (905)
Q Consensus 288 ---l~~l~~L~~L~Ls~N~l~ 305 (905)
...+.+|+.|+|++|.+.
T Consensus 265 ~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 265 PGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp SSCCTTSCCCSEEECCSSSSC
T ss_pred CCHHCCCCCCCEEECCCCCCC
T ss_conf 210021588897889899576
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.5e-35 Score=190.67 Aligned_cols=176 Identities=16% Similarity=0.211 Sum_probs=132.5
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCEEEEEEC-
Q ss_conf 5999789435446361999991-7993999999122281038999999999950899-991018739980996489973-
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQH-RNLVRLYGCCIEGARRLLVYD- 719 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~H-~niv~l~g~~~~~~~~~Lv~e- 719 (905)
++|...+.||+|+||+||+|+. .+++.||||++.... ....+.+|++.+..++| +|++.+++++......++|+|
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEE
T ss_conf 80699799841788299999998899799999975025--8299999999999964899987799996018811799996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002581 720 -------------------------------------------------------------------------------- 719 (905)
Q Consensus 720 -------------------------------------------------------------------------------- 719 (905)
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (293)
T d1csna_ 83 LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 162 (293)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEECCCCCCC
T ss_conf 48887999975203110689999999999999999977966266771315234754344795687236605771467665
Q ss_pred ---------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---------------88882333149887447427532346786729999999996102119999998851395243327
Q 002581 720 ---------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVD 784 (905)
Q Consensus 720 ---------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 784 (905)
.|||||.+.+..++.++|||||||++|||+||+.||..............+..........++
T Consensus 163 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l-- 240 (293)
T d1csna_ 163 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL-- 240 (293)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH--
T ss_pred CCEEECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH--
T ss_conf 411102467627751026798964888886999898319999998698767885302199999999705679995896--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 97888999999999999998023899999998999999852736
Q 002581 785 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 828 (905)
Q Consensus 785 ~~l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~~~~ 828 (905)
....+ .++..++..|++.+|++||+++.+.+.|+...+
T Consensus 241 --~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~ 278 (293)
T d1csna_ 241 --CAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278 (293)
T ss_dssp --TTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred --CCCCC----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf --57998----999999999843993008599999999999999
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-35 Score=193.48 Aligned_cols=180 Identities=18% Similarity=0.248 Sum_probs=123.6
Q ss_pred HCCCCCCCCCCCCCCEEEEEEE-ECCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEC------C
Q ss_conf 1599978943544636199999-179939999991222--810389999999999508999910187399809------9
Q 002581 642 TKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG------A 712 (905)
Q Consensus 642 t~~~~~~~~lG~G~fG~Vy~g~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~~~H~niv~l~g~~~~~------~ 712 (905)
.++|...+.||+|+||+||+|. ..+|+.||||++... .....+++.+|+++|++++|+|+|++++++... .
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 98718888983178839999999999979999998820028689999999999998668987425999996346456686
Q ss_pred EEEEEEC-------------------------------------------------------------------------
Q ss_conf 6489973-------------------------------------------------------------------------
Q 002581 713 RRLLVYD------------------------------------------------------------------------- 719 (905)
Q Consensus 713 ~~~Lv~e------------------------------------------------------------------------- 719 (905)
..+++++
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~ 176 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGS
T ss_pred EEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
T ss_conf 49999962588623200224530999999999999999999738876516677633455432200132100012575444
Q ss_pred ------CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH-----HHCCC---CCCCC-
Q ss_conf ------88882333149-8874474275323467867299999999961021199999988-----51395---24332-
Q 002581 720 ------GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL-----HENNQ---SLGLV- 783 (905)
Q Consensus 720 ------~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~-----~~~~~---~~~~~- 783 (905)
.|+|||...+. .++.++||||+||+++||+||+.||...........+...... ..... .....
T Consensus 177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (348)
T d2gfsa1 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256 (348)
T ss_dssp SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHT
T ss_pred CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH
T ss_conf 43454355583553377567855124320589999976889978898899999999730799757732001024454443
Q ss_pred -CCCCCCCC-----HHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf -79788899-----999999999999802389999999899999
Q 002581 784 -DPTLTEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 -d~~l~~~~-----~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
-+...... ......+..++.+|++.||.+|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 257 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 03557875556626789999999999977588345938999855
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-35 Score=192.21 Aligned_cols=167 Identities=19% Similarity=0.275 Sum_probs=125.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE----CCCCEEEEEECCCC----CCCCHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCE
Q ss_conf 5999789435446361999991----79939999991222----81038999999999950899-991018739980996
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL----SDGRVIAVKQLSIA----SHQGKNQFVNEIATISAVQH-RNLVRLYGCCIEGAR 713 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~----~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~~~H-~niv~l~g~~~~~~~ 713 (905)
++|...+.||+|+||+||+|.. .+|+.||||+++.. .....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred HCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
T ss_conf 02599989832878399999987658879489999983677210168999999999999864679839996200024873
Q ss_pred EEEEEC--------------------------------------------------------------------------
Q ss_conf 489973--------------------------------------------------------------------------
Q 002581 714 RLLVYD-------------------------------------------------------------------------- 719 (905)
Q Consensus 714 ~~Lv~e-------------------------------------------------------------------------- 719 (905)
.++|+|
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~ 183 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred EEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCEEEEECCCHHHHCCCC
T ss_conf 00123123411799998730454378888889999999988514998965477320124699988874132022203444
Q ss_pred -----------CCCCHHHHCCC--CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf -----------88882333149--88744742753234678672999999999610211999999885139524332797
Q 002581 720 -----------GYLAPEYAMRG--HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSLGLVDPT 786 (905)
Q Consensus 720 -----------~y~APE~~~~~--~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 786 (905)
.|+|||.+.+. .++.++||||+||+||||+||+.||......+....+ ...... ..+.
T Consensus 184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i--~~~~~~-------~~~~ 254 (322)
T d1vzoa_ 184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI--SRRILK-------SEPP 254 (322)
T ss_dssp GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH--HHHHHH-------CCCC
T ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HHHCCC-------CCCC
T ss_conf 4322122233333106876057768871325177779999997689998888777799999--983356-------8998
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHH
Q ss_conf 88899999999999999802389999999-----899999
Q 002581 787 LTEFNDKEALRVIGVALLCTQASPMMRPP-----MSRVVA 821 (905)
Q Consensus 787 l~~~~~~~~~~~~~i~~~C~~~~p~~RPs-----m~ev~~ 821 (905)
+.. ....++..++.+|++.+|++||| ++|+++
T Consensus 255 ~~~---~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 255 YPQ---EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCT---TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCC---CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHC
T ss_conf 865---4799999999997445898819997450999974
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=8.5e-32 Score=174.87 Aligned_cols=114 Identities=22% Similarity=0.256 Sum_probs=82.5
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 47546889800159999979987799899989521138955667751366588988612339987874763366588999
Q 002581 61 ALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGAL 140 (905)
Q Consensus 61 ~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~ 140 (905)
..+.++.+. ...+.+|++|+++++.++.. ..+..+++|++|+|++|.|++ ++ .++++++|++|++++|.+...
T Consensus 31 ~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i- 103 (384)
T d2omza2 31 KTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADI- 103 (384)
T ss_dssp CSSTTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCCCCCC--HHHHCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCC-
T ss_conf 777788639--88957878998999898776--242458999989681881798-86-334771101030134333222-
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCC
Q ss_conf 92335877764778034477888861221167664000257625
Q 002581 141 PPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHF 184 (905)
Q Consensus 141 p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l 184 (905)
+ .++++++|+.|++.++.+.+..+. .....+..+....|.+
T Consensus 104 ~-~l~~l~~L~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 144 (384)
T d2omza2 104 T-PLANLTNLTGLTLFNNQITDIDPL--KNLTNLNRLELSSNTI 144 (384)
T ss_dssp G-GGTTCTTCCEEECCSSCCCCCGGG--TTCTTCSEEEEEEEEE
T ss_pred C-CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
T ss_conf 2-111233433344332222222222--2222221121346631
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.9e-33 Score=182.32 Aligned_cols=176 Identities=14% Similarity=0.179 Sum_probs=124.7
Q ss_pred CCCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEEEEEEC--CEEEEEE
Q ss_conf 5999789435446361999991-799399999912228103899999999995089-99910187399809--9648997
Q 002581 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEG--ARRLLVY 718 (905)
Q Consensus 643 ~~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~--~~~~Lv~ 718 (905)
++|...+.||+|+||+||+|+. .+++.||||+++. ...+++.+|+++|.+++ ||||+++++++... ...++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEE
T ss_conf 671897898317481999999889997999999888---99999999999998515799876799999816877126888
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 002581 719 D------------------------------------------------------------------------------- 719 (905)
Q Consensus 719 e------------------------------------------------------------------------------- 719 (905)
|
T Consensus 112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 191 (328)
T d3bqca1 112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 191 (328)
T ss_dssp ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCS
T ss_pred EECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCEECCCCCCCCCCCC
T ss_conf 63179858997468999999999999999998876433443456441237748998366415654266468874443224
Q ss_pred --CCCCHHHHCCC-CCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHHH-HH----------HHHHHHHHCC--CCCCCC
Q ss_conf --88882333149-88744742753234678672999999999610211-99----------9999885139--524332
Q 002581 720 --GYLAPEYAMRG-HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIY-LL----------EWAWNLHENN--QSLGLV 783 (905)
Q Consensus 720 --~y~APE~~~~~-~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~~-l~----------~~~~~~~~~~--~~~~~~ 783 (905)
.|+|||.+.+. .++.++||||+||+++|+++|+.|+.......... .+ .|........ ......
T Consensus 192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T d3bqca1 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 271 (328)
T ss_dssp CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHC
T ss_conf 86424761026888888452323354555876048899988760189999999987884155555422544474300000
Q ss_pred CCC--------CCC-CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 797--------888-99999999999999802389999999899999
Q 002581 784 DPT--------LTE-FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 784 d~~--------l~~-~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
... ... ........+.+++.+|++.||.+|||++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 33343311211552112448999999999986699568908999964
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-30 Score=168.98 Aligned_cols=195 Identities=25% Similarity=0.294 Sum_probs=95.8
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 99951475468898001599999799877998999895211389556677513665889886123399878747633665
Q 002581 56 KLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNN 135 (905)
Q Consensus 56 ~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 135 (905)
+++..+++++. +|+.+. ++|++|+|++|.|++..+..|.++++|++|+|++|.|+ .++ .++.+++|++|+|++|+
T Consensus 14 ~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~ 88 (266)
T d1p9ag_ 14 EVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQ 88 (266)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSC
T ss_pred EEECCCCCCCE-ECCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCC
T ss_conf 99806999886-196757--68898988499289859778634565522135665444-431-11112232111112222
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 88999923358777647780344778888612211676640002576256889988777645782432255688879822
Q 002581 136 FSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS 215 (905)
Q Consensus 136 l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 215 (905)
+. ..+..+..+++|++|++++|.+....+ ..+..+.+++.|+++.|.+....+.
T Consensus 89 l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~------------------------~~~~~l~~l~~L~l~~n~l~~l~~~- 142 (266)
T d1p9ag_ 89 LQ-SLPLLGQTLPALTVLDVSFNRLTSLPL------------------------GALRGLGELQELYLKGNELKTLPPG- 142 (266)
T ss_dssp CS-SCCCCTTTCTTCCEEECCSSCCCCCCS------------------------STTTTCTTCCEEECTTSCCCCCCTT-
T ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCEEEC------------------------CCCCCCCCCCCCCCCCCCCCEECCC-
T ss_conf 21-111121222222222222231101100------------------------1122221111221243421022123-
Q ss_pred CCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35999998998028636778924340787544112225203588983347999989995668968766881113999997
Q 002581 216 LSKLASLESLRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN 295 (905)
Q Consensus 216 l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 295 (905)
.+..+++++.+++++|++++..+..|..+++|+.|+|++|+++ .+|..++.+++|+
T Consensus 143 -----------------------~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~ 198 (266)
T d1p9ag_ 143 -----------------------LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLP 198 (266)
T ss_dssp -----------------------TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCS
T ss_pred -----------------------CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCC
T ss_conf -----------------------3322111000000015652237200134212423430139785-5686677788899
Q ss_pred EEECCCCCCC
Q ss_conf 9978688696
Q 002581 296 YLFLGNNSLS 305 (905)
Q Consensus 296 ~L~Ls~N~l~ 305 (905)
.|+|++|.+.
T Consensus 199 ~L~L~~Np~~ 208 (266)
T d1p9ag_ 199 FAFLHGNPWL 208 (266)
T ss_dssp EEECCSCCBC
T ss_pred EEEECCCCCC
T ss_conf 9983699987
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5.6e-32 Score=175.81 Aligned_cols=177 Identities=17% Similarity=0.161 Sum_probs=123.1
Q ss_pred CCCCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC-----------CCCCCEEEEEEEEC
Q ss_conf 999789435446361999991-799399999912228103899999999995089-----------99910187399809
Q 002581 644 DFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-----------HRNLVRLYGCCIEG 711 (905)
Q Consensus 644 ~~~~~~~lG~G~fG~Vy~g~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-----------H~niv~l~g~~~~~ 711 (905)
+|...++||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|+.++++++ |+|||++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC-CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 579989975077818999999999979999998343-1336899999999998401455555422767647899876312
Q ss_pred --CEEEEEEC----------------------------------------------------------------------
Q ss_conf --96489973----------------------------------------------------------------------
Q 002581 712 --ARRLLVYD---------------------------------------------------------------------- 719 (905)
Q Consensus 712 --~~~~Lv~e---------------------------------------------------------------------- 719 (905)
...+++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCEEE
T ss_conf 56520234320003542000001223467868999999999999988876405864656770570563057656443056
Q ss_pred ---------------------CCCCHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHH----HHHHHHHHH-
Q ss_conf ---------------------888823331498874474275323467867299999999961021----199999988-
Q 002581 720 ---------------------GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI----YLLEWAWNL- 773 (905)
Q Consensus 720 ---------------------~y~APE~~~~~~~t~ksDVySfGvvl~El~tg~~p~~~~~~~~~~----~l~~~~~~~- 773 (905)
.|+|||......++.++||||+||+++||+||+.||......... .+...+...
T Consensus 173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg 252 (362)
T d1q8ya_ 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252 (362)
T ss_dssp ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 75314421234454223665210571321466777643201237899999878899898755432102689999999837
Q ss_pred ------HHCC-CCCCCCC---------C-C----------CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf ------5139-5243327---------9-7----------88899999999999999802389999999899999
Q 002581 774 ------HENN-QSLGLVD---------P-T----------LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 821 (905)
Q Consensus 774 ------~~~~-~~~~~~d---------~-~----------l~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 821 (905)
.... ......+ . . ...........+.++..+|+..||.+|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred CCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 998788624532200013201220243235776444210001567435899999999987799457908999966
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.2e-30 Score=166.29 Aligned_cols=197 Identities=24% Similarity=0.224 Sum_probs=112.1
Q ss_pred CCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99979987799899989521138955667751366588988612339987874763366588999923358777647780
Q 002581 76 QYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYI 155 (905)
Q Consensus 76 ~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 155 (905)
..+.+++.+++.++. +|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|+++ .+| .++.
T Consensus 10 ~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~--------- 75 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGT--------- 75 (266)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSC---------
T ss_pred CCCEEEECCCCCCCE-ECCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCC-CCCC---------
T ss_conf 898699806999886-196757--68898988499289859778634565522135665444-431-1111---------
Q ss_pred CCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 34477888861221167664000257625688998877764578243225568887982235999998998028636778
Q 002581 156 DSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235 (905)
Q Consensus 156 ~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~ 235 (905)
+++|+.|++++|++.. .+..+..+++|+.|++++|.+....+.
T Consensus 76 ---------------l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~--------------------- 118 (266)
T d1p9ag_ 76 ---------------LPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLG--------------------- 118 (266)
T ss_dssp ---------------CTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSS---------------------
T ss_pred ---------------CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEECC---------------------
T ss_conf ---------------2232111112222211-111212222222222222311011001---------------------
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC--C
Q ss_conf 92434078754411222520358898334799998999566896876688111399999799786886966799888--9
Q 002581 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK--S 313 (905)
Q Consensus 236 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~--~ 313 (905)
.+..+.++..|++.+|.+....+..+..+++|+.+++++|++++..+..+..+++|++|+|++|.++ .+|... .
T Consensus 119 ---~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~ 194 (266)
T d1p9ag_ 119 ---ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGS 194 (266)
T ss_dssp ---TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred ---CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCC
T ss_conf ---1222211112212434210221233322111000000015652237200134212423430139785-568667778
Q ss_pred CCCCEEEEECCCCC
Q ss_conf 99889980158799
Q 002581 314 ENLQNIDLSYNHLS 327 (905)
Q Consensus 314 ~~L~~LdLs~N~ls 327 (905)
.+|+.|+|++|.+.
T Consensus 195 ~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 195 HLLPFAFLHGNPWL 208 (266)
T ss_dssp CCCSEEECCSCCBC
T ss_pred CCCCEEEECCCCCC
T ss_conf 88999983699987
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.93 E-value=1.2e-22 Score=128.50 Aligned_cols=137 Identities=22% Similarity=0.255 Sum_probs=90.2
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 07799951475468898001599999799877998999895211389556677513665889886123399878747633
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLA 132 (905)
Q Consensus 53 ~i~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 132 (905)
+++.|++.+++++. +|+ .+++|++|++++|+|+ .+|.. +.+|+.|++.+|.++ .++. + .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~---~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPE---LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCS---CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEECC
T ss_pred CCCEEEECCCCCCC-CCC---CCCCCCEEECCCCCCC-CCCCC---HHHHHHHHHHHCCCC-HHHH-H--CCCCCCCCCC
T ss_conf 99899937999887-889---8789888989999796-33620---332033266551432-0321-0--2211111334
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 66588999923358777647780344778888612211676640002576256889988777645782432255688
Q 002581 133 NNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 133 ~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 209 (905)
+|.+. .+|. ++.+++|+.|++++|.+.... ... ..+..+.+..+... ....+..+..++.|+++.|...
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~-~~~---~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP-DLP---PSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC-CCC---TTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCS
T ss_pred CCCCC-CCCC-HHHHCCCEEECCCCCCCCCCC-CCC---CCCCCHHHCCCCCC--CCCCCCCCCCCEECCCCCCCCC
T ss_conf 55432-2210-011013123113565100132-233---33210000122222--3332000122200111233443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=9.1e-25 Score=139.24 Aligned_cols=152 Identities=15% Similarity=0.127 Sum_probs=95.6
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCEEECCC
Q ss_conf 79995147546889800159999979987799899989521138955667751366588988-61233998787476336
Q 002581 55 TKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPV-PRELGNLKELNLLSLAN 133 (905)
Q Consensus 55 ~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~Ls~ 133 (905)
+.+...+.+++ .+|+.+. +++++|++++|.++.+.+..|.++++|++|++++|.+...+ +..|.+++++++|.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEECCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 99998189988-7688889--98899987699189649668614643232110221124201001122222222211111
Q ss_pred -CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC-HHHHCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCC
Q ss_conf -65889999233587776477803447788886-122116766400025762568899887776-45782432255688
Q 002581 134 -NNFSGALPPEIGNLAKLEELYIDSCGASGEIP-STFAKLHNMQILRASDAHFTGKIPDFIGNW-TKLTALRLQGNSFQ 209 (905)
Q Consensus 134 -N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~ 209 (905)
|++....+..|.++++|++|++.+|.+....+ ..+..+..+..+...++.+....+..|..+ ..++.|+++.|.++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 2343222222122222222223421111255433322211112222222121112222222222331001220012333
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.91 E-value=4.8e-24 Score=135.59 Aligned_cols=77 Identities=30% Similarity=0.397 Sum_probs=38.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 78754411222520358898334799998999566896876688111399999799786886966799888999889980
Q 002581 242 SLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDL 321 (905)
Q Consensus 242 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~LdL 321 (905)
..++|+.|.+.+|.+.... .+..+++|+.|++++|++++ ++. +..+++|++|+|++|++++..|....++|+.|++
T Consensus 149 ~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~l 224 (227)
T d1h6ua2 149 GLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTL 224 (227)
T ss_dssp GCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCH--HHCCCCCCEECCCCCCCCCC-CHH-HCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 0211100233333333100--10564633564458884177-853-4479999989795996899802036999898971
Q ss_pred E
Q ss_conf 1
Q 002581 322 S 322 (905)
Q Consensus 322 s 322 (905)
+
T Consensus 225 s 225 (227)
T d1h6ua2 225 T 225 (227)
T ss_dssp E
T ss_pred E
T ss_conf 2
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.91 E-value=2.3e-21 Score=122.00 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=69.8
Q ss_pred CCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 99799877998999895211389556677513665889886123399878747633665889999233587776477803
Q 002581 77 YLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYID 156 (905)
Q Consensus 77 ~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 156 (905)
+|+.|+|+++.++ .+|+. +++|++|+|++|.|+ .+|..+ .+|+.|++++|.++ .++. + .++|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C--CTTCCEEECC
T ss_pred CCCEEEECCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCCH---HHHHHHHHHHCCCC-HHHH-H--CCCCCCCCCC
T ss_conf 9989993799988-78898---789888989999796-336203---32033266551432-0321-0--2211111334
Q ss_pred CCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 4477888861221167664000257625688998877764578243225568887982235999998998028636
Q 002581 157 SCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYF 232 (905)
Q Consensus 157 ~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 232 (905)
+|.+.. +|. +..+++|+.|++.++.+... +.. ...+..+.+..+... ....+..+..++.+.+..+..
T Consensus 107 ~n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~-~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 107 NNQLEK-LPE-LQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp SSCCSS-CCC-CTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCC
T ss_pred CCCCCC-CCC-HHHHCCCEEECCCCCCCCCC-CCC---CCCCCCHHHCCCCCC--CCCCCCCCCCCEECCCCCCCC
T ss_conf 554322-210-01101312311356510013-223---333210000122222--333200012220011123344
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=7e-24 Score=134.74 Aligned_cols=213 Identities=17% Similarity=0.114 Sum_probs=109.0
Q ss_pred CEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCEEEECC
Q ss_conf 79987799899989521138955667751366588988612339987874763366588999-92335877764778034
Q 002581 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGAL-PPEIGNLAKLEELYIDS 157 (905)
Q Consensus 79 ~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~ 157 (905)
+.++.++..++ .+|..+. +++++|+|++|.|....+..|.++++|++|++++|.+...+ +..|.++++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEECCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 99998189988-7688889--98899987699189649668614643232110221124201001122222222211111
Q ss_pred -CCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf -477888861221167664000257625688998-877764578243225568887982235999998998028636778
Q 002581 158 -CGASGEIPSTFAKLHNMQILRASDAHFTGKIPD-FIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSS 235 (905)
Q Consensus 158 -n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~ 235 (905)
|.+....+..|.++++|+.+++.+|.+....+. .+..+..+..+...++.+....+..+..+.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~--------------- 152 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------- 152 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSB---------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------
T ss_conf 23432222221222222222234211112554333222111122222221211122222222223---------------
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 92434078754411222520358898334799998999-56689687668811139999979978688696679988899
Q 002581 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTL-DLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE 314 (905)
Q Consensus 236 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L-~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 314 (905)
..+..+++.+|.++...+. .....++..+ ++++|+++...+..|..+++|++|++++|+++ .+|.....
T Consensus 153 --------~~l~~L~l~~n~l~~i~~~-~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~ 222 (242)
T d1xwdc1 153 --------FESVILWLNKNGIQEIHNC-AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLE 222 (242)
T ss_dssp --------SSCEEEECCSSCCCEECTT-TTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCT
T ss_pred --------CCCEEEECCCCCCCCCCCC-CCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCC-CCCHHHHC
T ss_conf --------3100122001233332222-2220111012123543246424788668999998989799289-45977973
Q ss_pred CCCEE
Q ss_conf 98899
Q 002581 315 NLQNI 319 (905)
Q Consensus 315 ~L~~L 319 (905)
++..|
T Consensus 223 ~l~~L 227 (242)
T d1xwdc1 223 NLKKL 227 (242)
T ss_dssp TCCEE
T ss_pred CCCCC
T ss_conf 77134
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.91 E-value=2.2e-23 Score=132.27 Aligned_cols=190 Identities=25% Similarity=0.291 Sum_probs=104.8
Q ss_pred CCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 15999997998779989998952113895566775136658898861233998787476336658899992335877764
Q 002581 72 LVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLE 151 (905)
Q Consensus 72 l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~ 151 (905)
+..+.+|+.|++.+|.++.. + .+.++++|++|++++|.+.+..+ +..+++|+++++++|.++ .+ ..+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i-~~l~~l~~L~ 110 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NV-SAIAGLQSIK 110 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CC-GGGTTCTTCC
T ss_pred HHHCCCCCEEECCCCCCCCC-H-HHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCC
T ss_conf 87848868997779999766-4-57448888376357853202543--112334320121112222-22-2222222221
Q ss_pred EEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 77803447788886122116766400025762568899887776457824322556888798223599999899802863
Q 002581 152 ELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIY 231 (905)
Q Consensus 152 ~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~ 231 (905)
.+.++.+..... ..+.....+..+.++. +.+... ..+....+|+.|.+.++.
T Consensus 111 ~l~l~~~~~~~~--~~~~~~~~~~~l~~~~------------------------~~~~~~--~~~~~~~~L~~L~l~~n~ 162 (227)
T d1h6ua2 111 TLDLTSTQITDV--TPLAGLSNLQVLYLDL------------------------NQITNI--SPLAGLTNLQYLSIGNAQ 162 (227)
T ss_dssp EEECTTSCCCCC--GGGTTCTTCCEEECCS------------------------SCCCCC--GGGGGCTTCCEEECCSSC
T ss_pred CCCCCCCCCCCC--CHHCCCCCHHHHHCHH------------------------HHHCHH--HHHCCCCCCCCCCCCCCC
T ss_conf 221222443311--0000023012220000------------------------000000--000102111002333333
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 6778924340787544112225203588983347999989995668968766881113999997997868
Q 002581 232 FVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN 301 (905)
Q Consensus 232 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 301 (905)
+.. ...+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++++ ++. +..+++|+.|++++
T Consensus 163 ~~~--~~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~-i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 163 VSD--LTPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp CCC--CGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCB-CGG-GTTCTTCCEEEEEE
T ss_pred CCC--CHHHCCCCCCEECCCCCCCCCC-CH-HHCCCCCCCEEECCCCCCCC-CCC-CCCCCCCCEEEEEC
T ss_conf 331--0010564633564458884177-85-34479999989795996899-802-03699989897129
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.88 E-value=6.1e-23 Score=130.00 Aligned_cols=130 Identities=21% Similarity=0.257 Sum_probs=82.9
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 077999514754688980015999997998779989998-9521138955667751366588988612339987874763
Q 002581 53 HITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGP-LPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSL 131 (905)
Q Consensus 53 ~i~~L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N~l~~~-~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 131 (905)
..+.++..+++++ .+|..+. +++++|+|++|.|+.. .+..|..+++|+.|+|++|.+....+..+..+++|++|+|
T Consensus 9 ~~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 9 EGTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCEEEEECCCCC-CCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 6999997089967-0298989--787889848987755302002578762721301363221212122211222210100
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCC
Q ss_conf 366588999923358777647780344778888612211676640002576256
Q 002581 132 ANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT 185 (905)
Q Consensus 132 s~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~ 185 (905)
++|++....|..|.++++|++|+|++|.+.+..+..|..+.+|+++++++|.+.
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 355344349799807974655245774535359778568753342000364434
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.88 E-value=2.7e-22 Score=126.67 Aligned_cols=127 Identities=23% Similarity=0.281 Sum_probs=56.0
Q ss_pred CEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 79987799899989521138955667751366588988-61233998787476336658899992335877764778034
Q 002581 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPV-PRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDS 157 (905)
Q Consensus 79 ~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~ 157 (905)
++++.+++.++ .+|..+. +++++|+|++|.|+..+ +..|+++++|++|+|++|.+....+..+..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEECCCCC-CCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 99997089967-0298989--78788984898775530200257876272130136322121212221122221010035
Q ss_pred CCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 477888861221167664000257625688998877764578243225568
Q 002581 158 CGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSF 208 (905)
Q Consensus 158 n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 208 (905)
|++....+..|.++++|+.|+|++|+++...+..|..+++|++|++++|.+
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 534434979980797465524577453535977856875334200036443
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.88 E-value=1.2e-21 Score=123.45 Aligned_cols=54 Identities=33% Similarity=0.416 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 8754411222520358898334799998999566896876688111399999799786
Q 002581 243 LKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLG 300 (905)
Q Consensus 243 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 300 (905)
+++|+.+++++|.+++ ++ .+.++++|+.|++++|+++. ++ .+..+++|+.|+|+
T Consensus 155 l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 155 LTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred CCCCCCCCCCCCCCCC-CC-CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECC
T ss_conf 1332100134643025-64-53678989999897998998-72-11699998999711
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.87 E-value=5.5e-21 Score=120.07 Aligned_cols=125 Identities=26% Similarity=0.334 Sum_probs=57.6
Q ss_pred CCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99997998779989998952113895566775136658898861233998787476336658899992335877764778
Q 002581 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154 (905)
Q Consensus 75 L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 154 (905)
+..|+.|++++|.++... .+..+++|++|+|++|.+++ ++ .++++++|++|++++|+++ .+| .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEE
T ss_pred HCCCCEEECCCCCCCCCH--HHHHCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
T ss_conf 548458978279888744--47648998987698960258-60-1135862120143333321-222-121222111223
Q ss_pred ECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 0344778888612211676640002576256889988777645782432255688
Q 002581 155 IDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 155 L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 209 (905)
+++|.+.. + ..+..+.+++.++++.|.++. +..+..+++|+.+++++|++.
T Consensus 119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~ 169 (210)
T d1h6ta2 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS 169 (210)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred CCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf 45653221-1-220111112221122233345--431000133210013464302
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.86 E-value=6.5e-21 Score=119.70 Aligned_cols=80 Identities=24% Similarity=0.275 Sum_probs=31.8
Q ss_pred CCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99997998779989998952113895566775136658898861233998787476336658899992335877764778
Q 002581 75 LQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELY 154 (905)
Q Consensus 75 L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 154 (905)
+..++.|++++|.++.. ..+..+++|++|++++|.+++. +. ++++++|++|+++.|.+. .++ .+.++++|+.|+
T Consensus 39 l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEE
T ss_pred HCCCCEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
T ss_conf 46878998999999775--2021378867575456556676-40-167752231111222222-221-111122322211
Q ss_pred ECCCCC
Q ss_conf 034477
Q 002581 155 IDSCGA 160 (905)
Q Consensus 155 L~~n~l 160 (905)
+++|..
T Consensus 113 l~~~~~ 118 (199)
T d2omxa2 113 LFNNQI 118 (199)
T ss_dssp CCSSCC
T ss_pred CCCCCC
T ss_conf 122222
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.86 E-value=4.7e-21 Score=120.43 Aligned_cols=177 Identities=22% Similarity=0.336 Sum_probs=93.8
Q ss_pred EECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 98779989998952113895566775136658898861233998787476336658899992335877764778034477
Q 002581 81 LKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGA 160 (905)
Q Consensus 81 L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l 160 (905)
+.++.+.+++.++ ...+.++++|++++|.+.. + +.+..+++|++|++++|+++.. + .+.++++|++|+++.|.+
T Consensus 23 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~-~-~l~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 23 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQI 96 (199)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCC
T ss_pred HHHCCCCCCCCCC--HHHHCCCCEEECCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCC
T ss_conf 9967787788559--8794687899899999977-5-2021378867575456556676-4-016775223111122222
Q ss_pred CCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 88886122116766400025762568899887776457824322556888798223599999899802863677892434
Q 002581 161 SGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFVSSSLDFV 240 (905)
Q Consensus 161 ~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~ 240 (905)
... + .+.++..|+.|+++++..... ..+..+++|+.|++++|.+.. + +.+
T Consensus 97 ~~~-~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-------------------------~~l 146 (199)
T d2omxa2 97 ADI-T-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-------------------------SAL 146 (199)
T ss_dssp CCC-G-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-------------------------GGG
T ss_pred CCC-C-CCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCC-C-------------------------CCC
T ss_conf 222-1-111122322211122222232--100012236776431111002-3-------------------------433
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 078754411222520358898334799998999566896876688111399999799
Q 002581 241 MSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYL 297 (905)
Q Consensus 241 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 297 (905)
..+++|+.|++.+|.+++. + .+.++++|+.|++++|++++ ++ .+..+++|+.|
T Consensus 147 ~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 147 SGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp TTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred CCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCC
T ss_conf 3211111122345555677-0-11679989999787997998-81-01278998949
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.4e-23 Score=133.15 Aligned_cols=109 Identities=24% Similarity=0.225 Sum_probs=67.9
Q ss_pred EEEEEEECCCCCCCCC-CCCCCCCCCCCEEECCCCCCCC----CCCHHHCCCCCCCEEECCCCCCCCC----CCCCCC-C
Q ss_conf 0779995147546889-8001599999799877998999----8952113895566775136658898----861233-9
Q 002581 53 HITKLRVYALNKKGVI-PEELVTLQYLTFLKIDRNFFTG----PLPSFIGNLSRLTLLSLAHNVFSGP----VPRELG-N 122 (905)
Q Consensus 53 ~i~~L~l~~~~~~~~~-p~~l~~L~~L~~L~L~~N~l~~----~~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~l~-~ 122 (905)
+++.|++..++++... ..-+..+++|+.|+|++|.++. .+...+..+++|++|+|++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEEECCCCCC
Q ss_conf 98787476336658899----9923358777647780344778
Q 002581 123 LKELNLLSLANNNFSGA----LPPEIGNLAKLEELYIDSCGAS 161 (905)
Q Consensus 123 L~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~n~l~ 161 (905)
..+|++|+|++|.++.. ++..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCH
T ss_conf 8877887788877543221012110000343200244433202
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=9.8e-22 Score=123.86 Aligned_cols=62 Identities=23% Similarity=0.163 Sum_probs=31.4
Q ss_pred HCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCC-CCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 07875441122252-035889833479999899956689-687668811139999979978688
Q 002581 241 MSLKNLKDLSLRNA-LITGTIPSGIGELQNLQTLDLSFN-NLTGQIPRTLFNIDSLNYLFLGNN 302 (905)
Q Consensus 241 ~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N 302 (905)
..+++|++|++++| .+++.....+..+++|++|+++++ .+++.....+..+++|+.|++.++
T Consensus 172 ~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 172 RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC
T ss_conf 2322212355322347783033332135768779899999787378999726999898964488
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.9e-22 Score=127.50 Aligned_cols=109 Identities=18% Similarity=0.261 Sum_probs=48.8
Q ss_pred CCCEEECCCCCCCCCC-CHHHCCCCCCCEEECCCCCCCC----CCCCCCCCCCCCCEEECCCCCCCCC----CCCCCC-C
Q ss_conf 9979987799899989-5211389556677513665889----8861233998787476336658899----992335-8
Q 002581 77 YLTFLKIDRNFFTGPL-PSFIGNLSRLTLLSLAHNVFSG----PVPRELGNLKELNLLSLANNNFSGA----LPPEIG-N 146 (905)
Q Consensus 77 ~L~~L~L~~N~l~~~~-p~~l~~L~~L~~L~Ls~N~l~~----~~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~l~-~ 146 (905)
+|+.||+++|+++... ...+..+++++.|+|++|.++. .+...+..+++|++|+|++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEEECCCCCCCC----CCHHHHCCCCCCEECCCCCCCC
Q ss_conf 77764778034477888----8612211676640002576256
Q 002581 147 LAKLEELYIDSCGASGE----IPSTFAKLHNMQILRASDAHFT 185 (905)
Q Consensus 147 L~~L~~L~L~~n~l~~~----~p~~l~~L~~L~~L~L~~n~l~ 185 (905)
..+|+.|+|++|.+... ++..+..+++|+.|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCH
T ss_conf 8877887788877543221012110000343200244433202
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.76 E-value=7.8e-21 Score=119.30 Aligned_cols=250 Identities=17% Similarity=0.166 Sum_probs=124.2
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCC----CCHHHCCCCCCCEEECCCCCCCCC----------CCCCCCCCCCCCEEECCC
Q ss_conf 980015999997998779989998----952113895566775136658898----------861233998787476336
Q 002581 68 IPEELVTLQYLTFLKIDRNFFTGP----LPSFIGNLSRLTLLSLAHNVFSGP----------VPRELGNLKELNLLSLAN 133 (905)
Q Consensus 68 ~p~~l~~L~~L~~L~L~~N~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~~----------~p~~l~~L~~L~~L~Ls~ 133 (905)
+...+.....|+.|+|++|.+... +...+...++|+.|+++++..... +...+...++|++|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999638997889784983778999999999985899888888777543345421067879998875477756330000
Q ss_pred CCCCCCC----CCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 6588999----923358777647780344778888612211676640002576256889988777645782432255688
Q 002581 134 NNFSGAL----PPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 134 N~l~~~~----p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 209 (905)
|.+...- ...+...++|+.|++++|.+...-...+.. .+..+.... .......|+.|.++.|.+.
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~--~l~~~~~~~---------~~~~~~~L~~l~l~~n~i~ 171 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--ALQELAVNK---------KAKNAPPLRSIICGRNRLE 171 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--HHHHHHHHH---------HHHTCCCCCEEECCSSCCT
T ss_pred CCCCCCCCCCHHHHHCCCCCCHHEECCCCCCCCCCCCCCCC--CCCCCCCCC---------CCCCCCCCCEEECCCCCCC
T ss_conf 13455433310111002343210000024666654311112--122221100---------0146764211101365013
Q ss_pred CC----CCCCCCCCCCCCEEEECCCCCCCCC-----HHHHHCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCEEECC
Q ss_conf 87----9822359999989980286367789-----24340787544112225203588----98334799998999566
Q 002581 210 GP----IPSSLSKLASLESLRISDIYFVSSS-----LDFVMSLKNLKDLSLRNALITGT----IPSGIGELQNLQTLDLS 276 (905)
Q Consensus 210 ~~----~p~~l~~l~~L~~L~l~~n~~~~~~-----~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls 276 (905)
.. +...+.....|+.|++..|.+.... ...+...++|+.|+|++|.++.. +...+...++|+.|+++
T Consensus 172 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls 251 (344)
T d2ca6a1 172 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 251 (344)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 55433221111233321335433322222223200243321101211222333322222222344433232211110300
Q ss_pred CCCCCCCCCCC----CC--CCCCCCEEECCCCCCCCCC----CC---CCCCCCCEEEEECCCCCC
Q ss_conf 89687668811----13--9999979978688696679----98---889998899801587999
Q 002581 277 FNNLTGQIPRT----LF--NIDSLNYLFLGNNSLSGTL----PT---QKSENLQNIDLSYNHLSG 328 (905)
Q Consensus 277 ~N~l~~~~p~~----l~--~l~~L~~L~Ls~N~l~g~~----p~---~~~~~L~~LdLs~N~lsg 328 (905)
+|.+.+.-... +. ....|+.|++++|.+...- .. ...+.|+.|++++|.+..
T Consensus 252 ~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 252 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
T ss_conf 47567156678887763156888898989898698089999999997038999989787980898
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=3.1e-20 Score=116.30 Aligned_cols=61 Identities=20% Similarity=0.179 Sum_probs=36.9
Q ss_pred CCCCCCCCEEECCCC-CCCCCCCCCCCCCCCCCEEECCCC-CCCCCCCC--CCCCCCCEEEEECC
Q ss_conf 479999899956689-687668811139999979978688-69667998--88999889980158
Q 002581 264 IGELQNLQTLDLSFN-NLTGQIPRTLFNIDSLNYLFLGNN-SLSGTLPT--QKSENLQNIDLSYN 324 (905)
Q Consensus 264 l~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N-~l~g~~p~--~~~~~L~~LdLs~N 324 (905)
+..+++|+.|++++| .+++.....+..+++|++|+++++ .++..... ...++|+.|+++++
T Consensus 171 ~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 171 VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC
T ss_conf 32322212355322347783033332135768779899999787378999726999898964488
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2e-18 Score=107.11 Aligned_cols=112 Identities=14% Similarity=0.091 Sum_probs=66.3
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 01599999799877998999895211389556677513665889886123399878747633665889999233587776
Q 002581 71 ELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKL 150 (905)
Q Consensus 71 ~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L 150 (905)
.+.+...|++|+|++|+|+. ++..+..+++|++|+|++|.|+. + +.+..+++|++|++++|.++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred HCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCEEECCCCCCCC-C-CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 51685748489788997886-57620041459989897997876-4-774457613064310213457776322334534
Q ss_pred CEEEECCCCCCCCCC-HHHHCCCCCCEECCCCCCCC
Q ss_conf 477803447788886-12211676640002576256
Q 002581 151 EELYIDSCGASGEIP-STFAKLHNMQILRASDAHFT 185 (905)
Q Consensus 151 ~~L~L~~n~l~~~~p-~~l~~L~~L~~L~L~~n~l~ 185 (905)
+.|++++|.+..... ..+..+++|+.|++.+|.++
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 434203000166542110013653206640799634
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.73 E-value=2.5e-20 Score=116.76 Aligned_cols=226 Identities=16% Similarity=0.163 Sum_probs=120.8
Q ss_pred CCHHHCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCCC---C-------CCCCCCCCCCEEEECC
Q ss_conf 952113895566775136658898----8612339987874763366588999---9-------2335877764778034
Q 002581 92 LPSFIGNLSRLTLLSLAHNVFSGP----VPRELGNLKELNLLSLANNNFSGAL---P-------PEIGNLAKLEELYIDS 157 (905)
Q Consensus 92 ~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~~~---p-------~~l~~L~~L~~L~L~~ 157 (905)
+...+.....|+.|+|++|.+... +...+...++|+.|+++.+...... + ..+...++|+.|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999638997889784983778999999999985899888888777543345421067879998875477756330000
Q ss_pred CCCCCC----CCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 477888----8612211676640002576256889988777645782432255688879822359999989980286367
Q 002581 158 CGASGE----IPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSSLSKLASLESLRISDIYFV 233 (905)
Q Consensus 158 n~l~~~----~p~~l~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 233 (905)
|.+... +...+...++|+.|++++|.+...-...++ ..|..+.. .........|+.+.++++.+.
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~--~~l~~~~~---------~~~~~~~~~L~~l~l~~n~i~ 171 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA--RALQELAV---------NKKAKNAPPLRSIICGRNRLE 171 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH--HHHHHHHH---------HHHHHTCCCCCEEECCSSCCT
T ss_pred CCCCCCCCCCHHHHHCCCCCCHHEECCCCCCCCCCCCCCC--CCCCCCCC---------CCCCCCCCCCCEEECCCCCCC
T ss_conf 1345543331011100234321000002466665431111--21222211---------000146764211101365013
Q ss_pred CCCHH----HHHCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECC
Q ss_conf 78924----340787544112225203588-----983347999989995668968766----88111399999799786
Q 002581 234 SSSLD----FVMSLKNLKDLSLRNALITGT-----IPSGIGELQNLQTLDLSFNNLTGQ----IPRTLFNIDSLNYLFLG 300 (905)
Q Consensus 234 ~~~~~----~~~~l~~L~~L~L~~n~l~~~-----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls 300 (905)
..... .+...+.|+.|+|++|.+... +...+..+++|+.|++++|.++.. +...+...++|+.|+|+
T Consensus 172 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls 251 (344)
T d2ca6a1 172 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 251 (344)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 55433221111233321335433322222223200243321101211222333322222222344433232211110300
Q ss_pred CCCCCCCC--------CCCCCCCCCEEEEECCCCCC
Q ss_conf 88696679--------98889998899801587999
Q 002581 301 NNSLSGTL--------PTQKSENLQNIDLSYNHLSG 328 (905)
Q Consensus 301 ~N~l~g~~--------p~~~~~~L~~LdLs~N~lsg 328 (905)
+|.+...- .......|+.||+++|.++.
T Consensus 252 ~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 252 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCH
T ss_conf 475671566788877631568888989898986980
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.8e-18 Score=106.36 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=69.0
Q ss_pred HCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCC
Q ss_conf 13895566775136658898861233998787476336658899992335877764778034477888861221167664
Q 002581 96 IGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQ 175 (905)
Q Consensus 96 l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~ 175 (905)
|.++.+|++|+|++|.|+ .++..+..+++|++|+|++|.++ .++ .+..+++|++|++++|.+....+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCC-CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 168574848978899788-65762004145998989799787-647-744576130643102134577763223345344
Q ss_pred EECCCCCCCCCCCC-CCCCCCCCCCEEECCCCCCC
Q ss_conf 00025762568899-88777645782432255688
Q 002581 176 ILRASDAHFTGKIP-DFIGNWTKLTALRLQGNSFQ 209 (905)
Q Consensus 176 ~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 209 (905)
.|++++|++..... ..+..+++|+.|++++|.+.
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 34203000166542110013653206640799634
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.69 E-value=7.6e-17 Score=99.08 Aligned_cols=102 Identities=21% Similarity=0.309 Sum_probs=64.1
Q ss_pred CEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 79987799899989521138955667751366588988612339987874763366588999923358777647780344
Q 002581 79 TFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSC 158 (905)
Q Consensus 79 ~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n 158 (905)
|+|+|++|+++. ++ .+..+++|++|++++|.++ .+|..++.+++|++|++++|.++ .+| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEECCCCCCCC-CC-CCCCCCCCCEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCC-CCC-CCCCCCCCCEEECCCC
T ss_conf 989868998988-71-0105898898979787168-65215655431354532432112-357-4123355576888898
Q ss_pred CCCCCC-CHHHHCCCCCCEECCCCCCCC
Q ss_conf 778888-612211676640002576256
Q 002581 159 GASGEI-PSTFAKLHNMQILRASDAHFT 185 (905)
Q Consensus 159 ~l~~~~-p~~l~~L~~L~~L~L~~n~l~ 185 (905)
.+.... ...+..+++|+.+++++|.++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCCCHHHCCCCCCCEEECCCCCCC
T ss_conf 6588888256537999999989799688
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.66 E-value=2.6e-16 Score=96.39 Aligned_cols=101 Identities=28% Similarity=0.339 Sum_probs=44.4
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEECCCCC
Q ss_conf 67751366588988612339987874763366588999923358777647780344778888612211676640002576
Q 002581 103 TLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDA 182 (905)
Q Consensus 103 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~L~~n 182 (905)
|+|+|++|.++ .++ .+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+... | .+..+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSS
T ss_pred CEEECCCCCCC-CCC-CCCCCCCCCEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCCCC-C-CCCCCCCCCEEECCCC
T ss_conf 98986899898-871-0105898898979787168-6521565543135453243211235-7-4123355576888898
Q ss_pred CCCCCC-CCCCCCCCCCCEEECCCCCC
Q ss_conf 256889-98877764578243225568
Q 002581 183 HFTGKI-PDFIGNWTKLTALRLQGNSF 208 (905)
Q Consensus 183 ~l~~~~-p~~~~~l~~L~~L~Ls~N~l 208 (905)
++.... ...+..+++|+.|++++|.+
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCHHHCCCCCCCEEECCCCCC
T ss_conf 658888825653799999998979968
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.63 E-value=1.5e-18 Score=107.79 Aligned_cols=112 Identities=26% Similarity=0.321 Sum_probs=52.1
Q ss_pred CCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCC
Q ss_conf 95211389556677513665889886123399878747633665889999233587776477803447788886122116
Q 002581 92 LPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGEIPSTFAKL 171 (905)
Q Consensus 92 ~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~L 171 (905)
++..+..+++|++|+|++|.|+. ++ .+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+... ..+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHH
T ss_pred HHHHHHCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCC
T ss_conf 24677626046151994468998-64-4247825357341353432-1000033221233333333222222--222222
Q ss_pred CCCCEECCCCCCCCCCCC-CCCCCCCCCCEEECCCCCC
Q ss_conf 766400025762568899-8877764578243225568
Q 002581 172 HNMQILRASDAHFTGKIP-DFIGNWTKLTALRLQGNSF 208 (905)
Q Consensus 172 ~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l 208 (905)
++|+.|++++|+++.... ..+..+++|+.|++++|.+
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred CCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 23411123410212554221236777630234279843
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.61 E-value=1.5e-18 Score=107.72 Aligned_cols=111 Identities=20% Similarity=0.232 Sum_probs=52.5
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 00159999979987799899989521138955667751366588988612339987874763366588999923358777
Q 002581 70 EELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAK 149 (905)
Q Consensus 70 ~~l~~L~~L~~L~L~~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~ 149 (905)
..+..+++|+.|+|++|+|+.+ + .+..+++|++|+|++|.++ .++..+..+++|++|++++|.++. + ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHH
T ss_pred HHHHCCCCCCEEECCCCCCCCC-C-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCC
T ss_conf 6776260461519944689986-4-4247825357341353432-100003322123333333322222-2-22222223
Q ss_pred CCEEEECCCCCCCCCC-HHHHCCCCCCEECCCCCCCC
Q ss_conf 6477803447788886-12211676640002576256
Q 002581 150 LEELYIDSCGASGEIP-STFAKLHNMQILRASDAHFT 185 (905)
Q Consensus 150 L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~L~~n~l~ 185 (905)
|+.|++++|.+..... ..+..+++|+.|++++|.+.
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 4111234102125542212367776302342798434
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=3.4e-15 Score=90.70 Aligned_cols=103 Identities=18% Similarity=0.089 Sum_probs=78.8
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEECCCC-CCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 995147546889800159999979987799-8999895211389556677513665889886123399878747633665
Q 002581 57 LRVYALNKKGVIPEELVTLQYLTFLKIDRN-FFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNN 135 (905)
Q Consensus 57 L~l~~~~~~~~~p~~l~~L~~L~~L~L~~N-~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 135 (905)
++..+++.. ..|..+..+++|++|++.+| .++.+.+..|..+++|+.|+|++|.|+...+..|..+++|++|+|++|+
T Consensus 13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEECCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 985289976-5860025765657431689866443692122566666721620212477420111245543333226787
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 88999923358777647780344778
Q 002581 136 FSGALPPEIGNLAKLEELYIDSCGAS 161 (905)
Q Consensus 136 l~~~~p~~l~~L~~L~~L~L~~n~l~ 161 (905)
++ .+|.......+|+.|+|++|.+.
T Consensus 92 l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 92 LE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred CC-CCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 85-15745633532124335798633
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.02 E-value=4.7e-11 Score=69.71 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=52.2
Q ss_pred CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCC------------------CCHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 7894354463619999917993999999122281------------------0389999999999508999910187399
Q 002581 647 PSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH------------------QGKNQFVNEIATISAVQHRNLVRLYGCC 708 (905)
Q Consensus 647 ~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~~~H~niv~l~g~~ 708 (905)
..+.||+|+||+||+|...+|+.||||+++.... .....+.+|...+.++.|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred HCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 27780248565999999799999999998604434666556563000888999999778999999981699914499862
Q ss_pred EECCEEEEEEC
Q ss_conf 80996489973
Q 002581 709 IEGARRLLVYD 719 (905)
Q Consensus 709 ~~~~~~~Lv~e 719 (905)
..++++|
T Consensus 84 ----~~~lvme 90 (191)
T d1zara2 84 ----GNAVLME 90 (191)
T ss_dssp ----TTEEEEE
T ss_pred ----CCEEEEE
T ss_conf ----8889999
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=1.7e-10 Score=66.85 Aligned_cols=122 Identities=19% Similarity=0.098 Sum_probs=0.0
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC--CCHHHHCCCCCCEE
Q ss_conf 5566775136658898861233998787476336658899992335877764778034477888--86122116766400
Q 002581 100 SRLTLLSLAHNVFSGPVPRELGNLKELNLLSLANNNFSGALPPEIGNLAKLEELYIDSCGASGE--IPSTFAKLHNMQIL 177 (905)
Q Consensus 100 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~n~l~~~--~p~~l~~L~~L~~L 177 (905)
...+.|+++++... ..+..+..+..++...+... .++..+.++++|++|+|++|+++.. ++..+..+++|+.|
T Consensus 22 ~~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L 96 (162)
T d1koha1 22 GSQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKIL 96 (162)
T ss_dssp SSSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCC
T ss_pred HHHCEEECCCCCCC----CHHHHCCCHHHCCHHHHHHH-HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 33086534359898----21554664011225556766-60788974878788637776666773158898658856100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-------CCCCCCCCEEE
Q ss_conf 02576256889988777645782432255688879822-------35999998998
Q 002581 178 RASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPSS-------LSKLASLESLR 226 (905)
Q Consensus 178 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-------l~~l~~L~~L~ 226 (905)
++++|.+....+-.+....+|+.|++++|.+....... +..+++|+.|+
T Consensus 97 ~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 97 NLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEC
T ss_conf 04357213423442220331042664899767676661569999999889978799
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.15 E-value=4.9e-07 Score=49.37 Aligned_cols=10 Identities=20% Similarity=0.218 Sum_probs=3.9
Q ss_pred CCCCEEECCC
Q ss_conf 9997998779
Q 002581 76 QYLTFLKIDR 85 (905)
Q Consensus 76 ~~L~~L~L~~ 85 (905)
+.|++|+|++
T Consensus 15 ~~L~~L~L~~ 24 (167)
T d1pgva_ 15 TDLKEVNINN 24 (167)
T ss_dssp SSCCEEECTT
T ss_pred CCCCEEEECC
T ss_conf 9981978279
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.43 E-value=9.4e-06 Score=42.86 Aligned_cols=15 Identities=7% Similarity=-0.033 Sum_probs=5.9
Q ss_pred CCCCCCEEECCCCCC
Q ss_conf 895566775136658
Q 002581 98 NLSRLTLLSLAHNVF 112 (905)
Q Consensus 98 ~L~~L~~L~Ls~N~l 112 (905)
..++|+.|+|++|.+
T Consensus 44 ~n~~L~~L~Ls~n~l 58 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRS 58 (166)
T ss_dssp TCCSCCEEECTTSCC
T ss_pred CCCCCCEEECCCCCC
T ss_conf 198257430158961
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.13 E-value=1.1e-05 Score=42.50 Aligned_cols=15 Identities=7% Similarity=0.022 Sum_probs=5.7
Q ss_pred CCCCCCEEECCCCCC
Q ss_conf 998787476336658
Q 002581 122 NLKELNLLSLANNNF 136 (905)
Q Consensus 122 ~L~~L~~L~Ls~N~l 136 (905)
..++|++|+|++|.+
T Consensus 44 ~n~~L~~L~Ls~n~l 58 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRS 58 (166)
T ss_dssp TCCSCCEEECTTSCC
T ss_pred CCCCCCEEECCCCCC
T ss_conf 198257430158961
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.09 E-value=0.17 Score=21.34 Aligned_cols=87 Identities=9% Similarity=-0.014 Sum_probs=54.7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEEEEEECCEE
Q ss_conf 99998715999789435446361999991799399999912228103899999999995089-99910187399809964
Q 002581 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQ-HRNLVRLYGCCIEGARR 714 (905)
Q Consensus 636 ~~l~~~t~~~~~~~~lG~G~fG~Vy~g~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~~~-H~niv~l~g~~~~~~~~ 714 (905)
.|+..--..|...+..+.+....||+.... +..+.+|+...........+.+|...+..+. +--+.++++++...+..
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~ 85 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHHHHHHCEEEEECCCCCCCCCEEEEEEC-CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCE
T ss_conf 999975135279976789987718999908-9869999848876532556999999999876069987289997508964
Q ss_pred EEEECCCCCH
Q ss_conf 8997388882
Q 002581 715 LLVYDGYLAP 724 (905)
Q Consensus 715 ~Lv~e~y~AP 724 (905)
++|++ |+..
T Consensus 86 ~lv~~-~l~G 94 (263)
T d1j7la_ 86 NLLMS-EADG 94 (263)
T ss_dssp EEEEE-CCSS
T ss_pred EEEEE-ECCC
T ss_conf 99998-6043
|