Citrus Sinensis ID: 002589

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900----

MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTSDGDSESESSLIDREPIDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

ccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccccccHHHHHcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccHHccccccHHHHHHHHHcccccccccccEEEEEEcccccccccccHHHHHcHHHHHHHHccccEEEEEccccccccHHHcccccccEEEEEEEcccEEEEEEEEEEEccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHcccccccccccEEEEEccccccccccHHcHHHcccccccccccccccccccccccHHHHHHHHHccEEcccccHHHHHHcccccccccHHHHHHcccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccEEcccccccccccccccc

ccccccHHEcccccEEEEEEccccccEEEEEEEEcccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEccHHcHHEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHHccccHcHHHHHcccccccccccccccccccccccEEEEEEEcccHHHcccccHHHHHccHHHHHHcccEEEEEEcccccccHHHHHHHHHccEEEEEEEcccEEEEEEEEEEEccEEEEEEccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHHcccccHHHHHHccccHHHcccccccccccccccEEHHHHHEEEccEEEEEcccHHHHEEccccccccHHHHHHccccEEEEEEccccccccccccccEcEccccccHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcHHHHHHHcccHHHHHHHHcccEEEccccccccHHEEEEcc

maskistsfispfvihfncknsnnknkhlnvpllfssrrllpaSCKMRQrsfgsqqkrqhvkkgspdqqrpndadlvptsdgdsesesslidrepidvehteeqnlgsvfvpelkeslvlncdggeelstsQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELThrgvsehseldvfanqnepanedlvlnnsEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESkkravhepvddmpWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTsssissglHVIHIAAEMapvakvggLGDVVAGLGKALqkkghlveivlpkydcmqydriddLRALDVVVESyfdgrlfknKVWVStieglpvyfiephhpdkffwrgqfygehddfrrFSFFSRAALELLLQagkqpdiihchdwqtafvaplywdlyvpkglnsarvcftchnfeyqgtapakelascgldvqqlnrpdrmqdnsahdrinplkgAIVFSNIVttvspsyaqevrtseggqglhstlnfhsKKFVGILngidtdawnpatDTFLKVQYNandlqgkaeNKESIRKhlglssadarkplvgcitrlvpqkgvHLIRHAIYRTLELGGQFillgsspvphiqvypiLLSSFSFLRKHIFNICNLYIKlgqggdltvnnncepwLHHIEVWC

maskistsfispfVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQrsfgsqqkrqhvkkgspdqqrpndadlvptsdgdsesesslidrepidveHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAelnsvkdaderVVMLEMERSSLESSLKELESklsisqedvaKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKeeskkravhepvddmpWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYfdgrlfknkVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLglssadarkPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTSDGDSESESSLIDREPIDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVmlemersslesslkelesklsISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPvakvgglgdvvaglgkalQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDfrrfsffsrAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

*******SFISPFVIHFNCKNSNNKNKHLNVPLLFSSR********************************************************************GSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQ*********************************************************************************************************KLSTLKVECKDLYEKVENLQGLLAKA*******************************************************************SYVQLYQ*************************VDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDV*****************INPLKGAIVFSNIVTTVSPSYAQEV******QGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNAND**********************RKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVW*

*****ST*FISPFVIHFNCKNSN**NKHLNVPLLFSSRRL*******************************************************************************************QLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLA****************ELLEDQLQKLQ****************FANQNEPANEDLVLNNSEI**************************************VMLEM**S******K******************LKVECKDLYEKVENLQGLLA***************************************************************************************************************RLLLIID*************************R*********************************VIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASC*********************************************IDREPIDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEME***************SISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

****ISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCK***********************************************************LGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHR*******************EDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEE*K*************EFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEK*************SSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTSDGDSESESSLIDREPIDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLTHRGVSEHSELDVFANQNEPANEDLVLNNSExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDERxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxADQxxxxxxxxxxxxxxxxxxxxxxxxxxxxKLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHIEVWC

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		904	2.2.26 [Sep-21-2011]
Q0WVX5		1040	Probable starch synthase	yes	no	0.918	0.798	0.647	0.0
Q6MAS9		500	Glycogen synthase OS=Prot	yes	no	0.379	0.686	0.509	4e-96
Q604D9		487	Glycogen synthase 2 OS=Me	yes	no	0.376	0.698	0.498	4e-92
Q2JNM6		491	Glycogen synthase 1 OS=Sy	yes	no	0.369	0.680	0.495	6e-86
Q2JSZ9		491	Glycogen synthase 1 OS=Sy	yes	no	0.399	0.735	0.459	4e-85
Q3M9U1		492	Glycogen synthase 1 OS=An	yes	no	0.371	0.682	0.469	5e-85
Q3JEW3		487	Glycogen synthase 1 OS=Ni	yes	no	0.405	0.753	0.432	2e-84
Q8Z0Q9		492	Probable glycogen synthas	yes	no	0.371	0.682	0.454	3e-83
P72623		491	Probable glycogen synthas	N/A	no	0.398	0.733	0.436	4e-83
F4IAG2		1042	Starch synthase 3, chloro	no	no	0.327	0.284	0.455	2e-75

>sp\|Q0WVX5\|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1	Back alignment and function desciption

 Score = 1171 bits (3030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/910 (64%), Positives = 708/910 (77%), Gaps = 80/910 (8%)

Query: 1   MASKIST-SFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQ 59
           M +K+S+  F++  +   +C+  +  ++         SRRL+  SCKMRQ+      KRQ
Sbjct: 1   MTTKLSSFCFLTHGLAGISCEREHGSSRRF---FYLPSRRLVSTSCKMRQQRGFDSSKRQ 57

Query: 60  HVKKGSPDQ--------QRPND---------ADLVPTSDGDSESESSL---ID------- 92
            VKKGSP          Q  ND         AD VP+   D+E  SS+   ID       
Sbjct: 58  EVKKGSPKPILSINSGLQSNNDEESDLENGSADSVPSLKSDAEKGSSIHGSIDMNHADEN 117

Query: 93  ---------------------------REPIDVEHTEEQNLGSVFVPELKESLVLNCDGG 125
                                         ID+ H + +NL ++ VPE+ ++L LN   G
Sbjct: 118 LEKKDDIQTTEVTRRKSKTAKKKGESIHATIDIGHDDGKNLDNITVPEVAKALSLNKSEG 177

Query: 126 EELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAET 185
           E++S  Q   L++MIR+AEKNIL L+EAR  AL+DL+KIL +KEALQGEIN LEM+L+ET
Sbjct: 178 EQISDGQFGELMTMIRSAEKNILRLDEARATALDDLNKILSDKEALQGEINVLEMKLSET 237

Query: 186 DARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEI 245
           D RI+ AAQEK HVELLE+QL+KL+HE+                   P   D       +
Sbjct: 238 DERIKTAAQEKAHVELLEEQLEKLRHEMI-----------------SPIESD-----GYV 275

Query: 246 HSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLS 305
            + SKEL++LK ENLSL+NDI++LK+EL+SVKD  ERVV+LE E S LESS+K+LESKLS
Sbjct: 276 LALSKELETLKLENLSLRNDIEMLKSELDSVKDTGERVVVLEKECSGLESSVKDLESKLS 335

Query: 306 ISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEES 365
           +SQEDV++LSTLK+EC DL+ KVE LQ LL +ATKQA+QA+ VLQQNQ+LR KVDK+EES
Sbjct: 336 VSQEDVSQLSTLKIECTDLWAKVETLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEES 395

Query: 366 LDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSL 425
           L EAN+YK SSEK+QQYNELMQ K+ LLEERL++SD EI SYVQLYQES+KEFQ+TL SL
Sbjct: 396 LKEANVYKESSEKIQQYNELMQHKVTLLEERLEKSDAEIFSYVQLYQESIKEFQETLESL 455

Query: 426 KEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAY 485
           KEESKK++  EPVDDMPW++WSRLLL +DGWLLEKK+++++A LLR+MVWK++ RI D Y
Sbjct: 456 KEESKKKSRDEPVDDMPWDYWSRLLLTVDGWLLEKKIASNDADLLRDMVWKKDRRIHDTY 515

Query: 486 MECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKG 545
           ++ K+KNE +AIS FLKL SS  SSGL+V+HIAAEMAPVAKVGGLGDVVAGLGKALQ+KG
Sbjct: 516 IDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAEMAPVAKVGGLGDVVAGLGKALQRKG 575

Query: 546 HLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPD 605
           HLVEI+LPKYDCMQYDR+ DLRALD VVESYFDG+L+KNK+W+ T+EGLPV+FIEP HP 
Sbjct: 576 HLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPS 635

Query: 606 KFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPK 665
           KFFWRGQFYGE DDFRRFS+FSRAALELLLQ+GK+PDIIHCHDWQTAFVAPLYWDLY PK
Sbjct: 636 KFFWRGQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK 695

Query: 666 GLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFS 725
           GL+SAR+CFTCHNFEYQGTA A EL SCGLDV QLNRPDRMQD+S+ DR+NP+KGAI+FS
Sbjct: 696 GLDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFS 755

Query: 726 NIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNA 785
           NIVTTVSP+YAQEVRT+EGG+GLHSTLNFHSKKF+GILNGIDTD+WNPATD FLK Q+NA
Sbjct: 756 NIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNA 815

Query: 786 NDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFIL 845
            DLQGK ENK ++RK LGLSSA++R+PLVGCITRLVPQKGVHLIRHAIYRTLELGGQF+L
Sbjct: 816 KDLQGKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVL 875

Query: 846 LGSSPVPHIQ 855
           LGSSPVPHIQ
Sbjct: 876 LGSSPVPHIQ 885

Probably involved in the priming of starch granule formation. May play a regulatory role in the control of starch accumulation in plastids. Is necessary and sufficient to establish the correct number of starch granules observed in chloroplasts.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1

>sp\|Q6MAS9\|GLGA_PARUW Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1	Back alignment and function description

>sp\|Q604D9\|GLGA2_METCA Glycogen synthase 2 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=glgA2 PE=3 SV=2	Back alignment and function description

>sp\|Q2JNM6\|GLGA1_SYNJB Glycogen synthase 1 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=glgA1 PE=3 SV=1	Back alignment and function description

>sp\|Q2JSZ9\|GLGA1_SYNJA Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA1 PE=3 SV=1	Back alignment and function description

>sp\|Q3M9U1\|GLGA1_ANAVT Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1	Back alignment and function description

>sp\|Q3JEW3\|GLGA1_NITOC Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1	Back alignment and function description

>sp\|Q8Z0Q9\|GLGA2_NOSS1 Probable glycogen synthase 2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=glgA2 PE=3 SV=1	Back alignment and function description

>sp\|P72623\|GLGA2_SYNY3 Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=glgA2 PE=1 SV=1	Back alignment and function description

>sp\|F4IAG2\|SSY3_ARATH Starch synthase 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS3 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		904
225463426		1011	PREDICTED: uncharacterized protein LOC10	0.929	0.830	0.718	0.0
356512165		989	PREDICTED: uncharacterized protein LOC10	0.918	0.839	0.693	0.0
224055495		887	predicted protein [Populus trichocarpa]	0.810	0.826	0.769	0.0
42566924		1040	starch synthase 4 [Arabidopsis thaliana]	0.918	0.798	0.647	0.0
255557389		998	starch synthase, putative [Ricinus commu	0.888	0.804	0.669	0.0
2832698		1071	starch synthase-like protein [Arabidopsi	0.918	0.774	0.637	0.0
350538831		1001	starch synthase IV [Solanum lycopersicum	0.892	0.806	0.694	0.0
356524929		873	PREDICTED: glycogen synthase-like [Glyci	0.792	0.820	0.754	0.0
4582783		874	starch synthase, isoform V [Vigna unguic	0.793	0.820	0.748	0.0
357132826		921	PREDICTED: glycogen synthase-like [Brach	0.755	0.741	0.577	0.0

>gi\|225463426\|ref\|XP_002274716.1\| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera] gi\|297740652\|emb\|CBI30834.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/874 (71%), Positives = 726/874 (83%), Gaps = 34/874 (3%)

Query: 1   MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQH 60
           MA+K+ST F+S      +CK SN +        L  S RLLPASCKMR R+F SQ KRQ 
Sbjct: 1   MAAKLSTCFLSHGWGSLDCKRSNGR-------FLAPSHRLLPASCKMRHRNFSSQHKRQQ 53

Query: 61  VKKGSPDQQRPNDADLVPTSDGDSESESSLID------------------REPIDVEHTE 102
            KK SPD+ RP ++      D D+E E++L D                     I +EH  
Sbjct: 54  TKKVSPDR-RPTNSHFQSNGDEDTEPENALADGVSSLNQGTTPDDEDADVDSHIAIEHIN 112

Query: 103 EQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLH 162
           +  L  + V E    L +N   GE+LS+ QL++L+ M++NAEKNILLLN+ARV+AL+DL 
Sbjct: 113 DNPLKHLTVSEEMTPLGINVKSGEQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLE 172

Query: 163 KILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHS 222
           KIL EK+ALQGEIN LEMRLAET+ARI+VAAQEKIHVE+LE+QL  L++EL+HRGV+E S
Sbjct: 173 KILTEKDALQGEINILEMRLAETNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGS 232

Query: 223 ELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADER 282
             D+  N N+  +         +HS  KEL  L+TEN+SLK+DI  LK EL+ V+  D+R
Sbjct: 233 GADMHENWNKAFDG--------VHSLGKELSLLRTENVSLKDDILALKEELSHVQKTDKR 284

Query: 283 VVMLEMERSSLESSLKELESKLSISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQA 342
           VVMLE ERS LES+LKELE KL  SQEDV+KLSTLK ECK+L+++VENLQ LL +AT QA
Sbjct: 285 VVMLEKERSFLESALKELEFKLVASQEDVSKLSTLKFECKNLWDRVENLQVLLDRATDQA 344

Query: 343 DQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDE 402
           D+AI VL+QNQELRKKVD LEESL+EAN+YKLSSEKMQQYN+LMQ+K+KLLEERL RSDE
Sbjct: 345 DKAILVLEQNQELRKKVDMLEESLEEANVYKLSSEKMQQYNDLMQKKIKLLEERLDRSDE 404

Query: 403 EIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKL 462
           EI SYV+LYQES+KEFQDTL++LKEESK+RA++EPVDDMPW+FWSRLLLIIDGWLLEKK+
Sbjct: 405 EILSYVKLYQESIKEFQDTLNNLKEESKRRALNEPVDDMPWDFWSRLLLIIDGWLLEKKI 464

Query: 463 STSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMA 522
           S ++AKLLREMVWKR+GRIRDAY+ CK+ NEHEA++ FLKLTSS   S LHVIHIAAEMA
Sbjct: 465 SANDAKLLREMVWKRDGRIRDAYLVCKDTNEHEAVAIFLKLTSSPKRSRLHVIHIAAEMA 524

Query: 523 PVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLF 582
           PVAKVGGLGDVV+GL +ALQKKGHLVEIVLPKYDCMQYDRI DLR LD+ +ESYFDGRLF
Sbjct: 525 PVAKVGGLGDVVSGLSRALQKKGHLVEIVLPKYDCMQYDRIRDLRVLDMELESYFDGRLF 584

Query: 583 KNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPD 642
           +NKVWV T+EGLPVYFIEPHHP KFFWRG  YGEHDDFRRFS+FSRAALELLLQAGK+PD
Sbjct: 585 RNKVWVGTVEGLPVYFIEPHHPSKFFWRGTVYGEHDDFRRFSYFSRAALELLLQAGKKPD 644

Query: 643 IIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNR 702
           IIHCHDWQTAFVAPLYWDLY PKGLNSAR+CFTCHNFEYQGTAPA E+ASCGLDV  LNR
Sbjct: 645 IIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNR 704

Query: 703 PDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGI 762
           PDRMQDNSAHDR+NP+KGAIVFSNIVTTVSP+YAQEVRTSEGG+GLHSTLN HSKKF+GI
Sbjct: 705 PDRMQDNSAHDRVNPVKGAIVFSNIVTTVSPTYAQEVRTSEGGRGLHSTLNSHSKKFIGI 764

Query: 763 LNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVP 822
           LNGIDTDAW+PATD +LK Q+NANDLQGKAENKE++RKHLGLS AD R+PLVGCI RLVP
Sbjct: 765 LNGIDTDAWDPATDVYLKSQFNANDLQGKAENKEALRKHLGLSYADTRRPLVGCIARLVP 824

Query: 823 QKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQV 856
           QKG+HLIRHAIYRTLELGGQF+LLGSSPVPHIQV
Sbjct: 825 QKGIHLIRHAIYRTLELGGQFVLLGSSPVPHIQV 858

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356512165\|ref\|XP_003524791.1\| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]	Back alignment and taxonomy information

>gi\|224055495\|ref\|XP_002298514.1\| predicted protein [Populus trichocarpa] gi\|222845772\|gb\|EEE83319.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|42566924\|ref\|NP_193558.3\| starch synthase 4 [Arabidopsis thaliana] gi\|122230204\|sp\|Q0WVX5.1\|SSY4_ARATH RecName: Full=Probable starch synthase 4, chloroplastic/amyloplastic; Short=AtSS4; AltName: Full=Soluble starch synthase IV; Flags: Precursor gi\|110741548\|dbj\|BAE98723.1\| starch synthase-like protein [Arabidopsis thaliana] gi\|332658615\|gb\|AEE84015.1\| starch synthase 4 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|255557389\|ref\|XP_002519725.1\| starch synthase, putative [Ricinus communis] gi\|223541142\|gb\|EEF42698.1\| starch synthase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|2832698\|emb\|CAA16796.1\| starch synthase-like protein [Arabidopsis thaliana] gi\|7268617\|emb\|CAB78826.1\| starch synthase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|350538831\|ref\|NP_001234617.1\| starch synthase IV [Solanum lycopersicum] gi\|247643234\|gb\|ACT09058.1\| starch synthase IV precursor [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|356524929\|ref\|XP_003531080.1\| PREDICTED: glycogen synthase-like [Glycine max]	Back alignment and taxonomy information

>gi\|4582783\|emb\|CAB40375.1\| starch synthase, isoform V [Vigna unguiculata]	Back alignment and taxonomy information

>gi\|357132826\|ref\|XP_003568029.1\| PREDICTED: glycogen synthase-like [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		904
TAIR\|locus:2141936		1040	SS4 "starch synthase 4" [Arabi	0.859	0.747	0.593	3.2e-248
TAIR\|locus:505006717		460	AT5G65685 [Arabidopsis thalian	0.438	0.860	0.312	6.9e-56
TIGR_CMR\|GSU_3257		484	GSU_3257 "glycogen synthase" [	0.369	0.690	0.313	1.4e-40
TIGR_CMR\|GSU_1023		501	GSU_1023 "glycogen synthase" [	0.367	0.662	0.317	3.4e-35
TIGR_CMR\|BA_5120		476	BA_5120 "glycogen synthase" [B	0.372	0.707	0.275	1.9e-34
UNIPROTKB\|P0A6U8		477	glgA [Escherichia coli K-12 (t	0.358	0.679	0.272	1.3e-24
TAIR\|locus:2102102		792	SS2 "starch synthase 2" [Arabi	0.360	0.411	0.296	7.8e-22
TAIR\|locus:2169749		652	SS1 "starch synthase 1" [Arabi	0.222	0.308	0.361	2.2e-21
UNIPROTKB\|Q9KRB6		484	glgA "Glycogen synthase" [Vibr	0.275	0.514	0.299	3e-21
TIGR_CMR\|VC_1726		484	VC_1726 "glycogen synthase" [V	0.275	0.514	0.299	3e-21

TAIR\|locus:2141936 SS4 "starch synthase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2391 (846.7 bits), Expect = 3.2e-248, P = 3.2e-248
 Identities = 476/802 (59%), Positives = 590/802 (73%)

Query:    74 ADLVPTSDGDSESESSL---IDR----EPI----DVEHTEEQNLGSVFVPELKESLVLNC 122
             AD VP+   D+E  SS+   ID     E +    D++ TE     S    +  ES+    
Sbjct:    89 ADSVPSLKSDAEKGSSIHGSIDMNHADENLEKKDDIQTTEVTRRKSKTAKKKGESIHATI 148

Query:   123 DGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALED--LHKILQEKEALQGEINAL-E 179
             D G +     LDN+   +    K  L LN++  + + D    +++    + +  I  L E
Sbjct:   149 DIGHD-DGKNLDNIT--VPEVAK-ALSLNKSEGEQISDGQFGELMTMIRSAEKNILRLDE 204

Query:   180 MRLAETDARIRVAAQEKI---HVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANE 236
              R    D   ++ + ++     + +LE +L +    +      E + +++   Q E    
Sbjct:   205 ARATALDDLNKILSDKEALQGEINVLEMKLSETDERIK-TAAQEKAHVELLEEQLEKLRH 263

Query:   237 DLVL---NNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVXXXXXXXXX 293
             +++    ++  + + SKEL++LK ENLSL+NDI++LK+EL+SVKD  ERVV         
Sbjct:   264 EMISPIESDGYVLALSKELETLKLENLSLRNDIEMLKSELDSVKDTGERVVVLEKECSGL 323

Query:   294 XXXXXXXXXXXXISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQ 353
                         +SQEDV++LSTLK+EC DL+ KVE LQ LL +ATKQA+QA+ VLQQNQ
Sbjct:   324 ESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVETLQLLLDRATKQAEQAVIVLQQNQ 383

Query:   354 ELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQE 413
             +LR KVDK+EESL EAN+YK SSEK+QQYNELMQ K+ LLEERL++SD EI SYVQLYQE
Sbjct:   384 DLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTLLEERLEKSDAEIFSYVQLYQE 443

Query:   414 SVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREM 473
             S+KEFQ+TL SLKEESKK++  EPVDDMPW++WSRLLL +DGWLLEKK+++++A LLR+M
Sbjct:   444 SIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDGWLLEKKIASNDADLLRDM 503

Query:   474 VWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPXXXXXXXXXX 533
             VWK++ RI D Y++ K+KNE +AIS FLKL SS  SSGL+V+HIAAEMAP          
Sbjct:   504 VWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAEMAPVAKVGGLGDV 563

Query:   534 XXXXXXXXQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEG 593
                     Q+KGHLVEI+LPKYDCMQYDR+ DLRALD VVESYFDG+L+KNK+W+ T+EG
Sbjct:   564 VAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIGTVEG 623

Query:   594 LPVYFIEPHHPDKFFWRGQFYGEHDDXXXXXXXXXAALELLLQAGKQPDIIHCHDWQTAF 653
             LPV+FIEP HP KFFWRGQFYGE DD         AALELLLQ+GK+PDIIHCHDWQTAF
Sbjct:   624 LPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDWQTAF 683

Query:   654 VAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHD 713
             VAPLYWDLY PKGL+SAR+CFTCHNFEYQGTA A EL SCGLDV QLNRPDRMQD+S+ D
Sbjct:   684 VAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGD 743

Query:   714 RINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNP 773
             R+NP+KGAI+FSNIVTTVSP+YAQEVRT+EGG+GLHSTLNFHSKKF+GILNGIDTD+WNP
Sbjct:   744 RVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNP 803

Query:   774 ATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 833
             ATD FLK Q+NA DLQGK ENK ++RK LGLSSA++R+PLVGCITRLVPQKGVHLIRHAI
Sbjct:   804 ATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAI 863

Query:   834 YRTLELGGQFILLGSSPVPHIQ 855
             YRTLELGGQF+LLGSSPVPHIQ
Sbjct:   864 YRTLELGGQFVLLGSSPVPHIQ 885

GO:0009011 "starch synthase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009250 "glucan biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005982 "starch metabolic process" evidence=RCA;IMP

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR\|locus:505006717 AT5G65685 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

TIGR_CMR\|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)]	Back alignment and assigned GO terms

UNIPROTKB\|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)]	Back alignment and assigned GO terms

TAIR\|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

TIGR_CMR\|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0WVX5	SSY4_ARATH	2, ., 4, ., 1, ., 2, 1	0.6472	0.9181	0.7980	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.21	LOW CONFIDENCE prediction!
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.I.2314.1	hypothetical protein (887 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_LG_V001651	SubName- Full=Starch branching enzyme I; (701 aa)	•			•	•	0.563
	eugene3.00280310	SubName- Full=Starch branching enzyme II; (730 aa)	•				•	0.557
	estExt_fgenesh4_pg.C_LG_IX1158	hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)	•	•	•		•	0.540
	fgenesh4_pm.C_LG_XIV000240	glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)	•	•			•	0.538
	gw1.V.1420.1	glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)		•			•	0.533
	estExt_Genewise1_v1.C_LG_IV2986	hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)	•	•	•		•	0.525
	eugene3.00141188	RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (523 aa)		•			•	0.518
	estExt_fgenesh4_pm.C_LG_II0158	glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)		•			•	0.516
	estExt_Genewise1_v1.C_LG_IX1717	glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (527 aa)		•			•	0.512
	estExt_Genewise1_v1.C_LG_VIII1252	glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)		•			•	0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		904
PLN02939		977	PLN02939, PLN02939, transferase, transferring glyc	0.0
TIGR02095		473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	1e-141
cd03791		476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	1e-140
PRK00654		466	PRK00654, glgA, glycogen synthase; Provisional	1e-133
PLN02316		1036	PLN02316, PLN02316, synthase/transferase	9e-98
COG0297		487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	3e-90
pfam08323		234	pfam08323, Glyco_transf_5, Starch synthase catalyt	7e-82
PRK14099		485	PRK14099, PRK14099, glycogen synthase; Provisional	7e-48
PRK14098		489	PRK14098, PRK14098, glycogen synthase; Provisional	1e-39
cd03801		374	cd03801, GT1_YqgM_like, This family is most closel	1e-13
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	8e-13
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-12
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	1e-11
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	2e-10
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	7e-10
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	9e-10
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-09
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-09
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	1e-09
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	5e-09
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	8e-09
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	1e-08
pfam12718		143	pfam12718, Tropomyosin_1, Tropomyosin like	4e-08
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	5e-08
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	6e-08
COG5185		622	COG5185, HEC1, Protein involved in chromosome segr	1e-07
pfam13579		158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	2e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-07
cd03798		377	cd03798, GT1_wlbH_like, This family is most closel	8e-07
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	1e-06
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	2e-06
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	3e-06
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	5e-06
COG5185		622	COG5185, HEC1, Protein involved in chromosome segr	6e-06
COG1579		239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	6e-06
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	7e-06
pfam12718		143	pfam12718, Tropomyosin_1, Tropomyosin like	1e-05
pfam02463		1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	1e-05
TIGR03346		852	TIGR03346, chaperone_ClpB, ATP-dependent chaperone	2e-05
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	3e-05
TIGR00606		1311	TIGR00606, rad50, rad50	5e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-05
COG1579		239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	6e-05
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	7e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-04
pfam07888		546	pfam07888, CALCOCO1, Calcium binding and coiled-co	2e-04
TIGR04211		198	TIGR04211, SH3_and_anchor, SH3 domain protein	2e-04
pfam07111		739	pfam07111, HCR, Alpha helical coiled-coil rod prot	2e-04
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	3e-04
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	3e-04
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	3e-04
COG5022		1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	3e-04
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	4e-04
PRK01156		895	PRK01156, PRK01156, chromosome segregation protein	4e-04
COG3096		1480	COG3096, MukB, Uncharacterized protein involved in	4e-04
COG4942		420	COG4942, COG4942, Membrane-bound metallopeptidase	5e-04
COG4372		499	COG4372, COG4372, Uncharacterized protein conserve	5e-04
pfam13514		1118	pfam13514, AAA_27, AAA domain	8e-04
pfam02463		1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.001
PRK01156		895	PRK01156, PRK01156, chromosome segregation protein	0.001
COG4372		499	COG4372, COG4372, Uncharacterized protein conserve	0.001
pfam05557		722	pfam05557, MAD, Mitotic checkpoint protein	0.001
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	0.001
pfam07926		132	pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	0.001
COG1579		239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	0.002
pfam13514		1118	pfam13514, AAA_27, AAA domain	0.002
cd03807		365	cd03807, GT1_WbnK_like, This family is most closel	0.002
cd03825		365	cd03825, GT1_wcfI_like, This family is most closel	0.002
pfam13851		201	pfam13851, GAS, Growth-arrest specific micro-tubul	0.002
pfam10186		307	pfam10186, Atg14, UV radiation resistance protein	0.002
pfam10174		774	pfam10174, Cast, RIM-binding protein of the cytoma	0.002
pfam05557		722	pfam05557, MAD, Mitotic checkpoint protein	0.003
TIGR04320		356	TIGR04320, Surf_Exclu_PgrA, SEC10/PgrA surface exc	0.003
pfam07926		132	pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	0.004
TIGR03185		650	TIGR03185, DNA_S_dndD, DNA sulfur modification pro	0.004

>gnl\|CDD\|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups	Back alignment and domain information

 Score = 1312 bits (3398), Expect = 0.0
 Identities = 557/842 (66%), Positives = 655/842 (77%), Gaps = 52/842 (6%)

Query: 30  NVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTSDGDSESESS 89
             P    SRR L  SC+ R+R F SQQK++   K    +QR +++ L   +D + + E++
Sbjct: 20  RAPFYLPSRRRLAVSCRARRRGFSSQQKKK-RGKNIAPKQRSSNSKLQSNTDENGQLENT 78

Query: 90  LIDREP---------------IDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLD 134
            +                     ++  E           +      N   GE+LS  QL+
Sbjct: 79  SLRTVMELPQKSTSSDDDHNRASMQRDEAIA-------AIDNEQQTNSKDGEQLSDFQLE 131

Query: 135 NLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQ 194
           +L+ MI+NAEKNILLLN+AR+QALEDL KIL EKEALQG+IN LEMRL+ETDARI++AAQ
Sbjct: 132 DLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQ 191

Query: 195 EKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDS 254
           EKIHVE+LE+QL+KL++EL  RG +E                        +HS SKELD 
Sbjct: 192 EKIHVEILEEQLEKLRNELLIRGATE---------------------GLCVHSLSKELDV 230

Query: 255 LKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVAKL 314
           LK EN+ LK+DI+ LKAEL  V + +ERV  LE ERS L++SL+ELESK  ++QEDV+KL
Sbjct: 231 LKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKL 290

Query: 315 STLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKL 374
           S L+ +C   +EKVENLQ LL +AT Q ++A  VL QNQ+LR KVDKLE SL EAN+ K 
Sbjct: 291 SPLQYDC--WWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKF 348

Query: 375 SSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAV 434
           SS K+    EL+QQK+KLLEERLQ SD EIHSY+QLYQES+KEFQDTL  LKEESKKR++
Sbjct: 349 SSYKV----ELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSL 404

Query: 435 HEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEH 494
             P DDMP EFWSR+LL+IDGWLLEKK+S ++AKLLREMVWKR+GRIR+AY+ CK KNE 
Sbjct: 405 EHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNER 464

Query: 495 EAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPK 554
           EA+  FLKLT S  SSGLH++HIAAEMAPVAKVGGL DVV+GLGKALQKKGHLVEIVLPK
Sbjct: 465 EAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPK 524

Query: 555 YDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFY 614
           YDCMQYD+I +L+ LDVVVESYFDG LFKNK+W  T+EGLPVYFIEP HP KFFWR Q+Y
Sbjct: 525 YDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYY 584

Query: 615 GEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCF 674
           GEHDDF+RFS+FSRAALELL Q+GK+PDIIHCHDWQTAFVAPLYWDLY PKG NSAR+CF
Sbjct: 585 GEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICF 644

Query: 675 TCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPS 734
           TCHNFEYQGTAPA +LASCGLDV QL+RPDRMQDN+ H RIN +KGAIV+SNIVTTVSP+
Sbjct: 645 TCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNA-HGRINVVKGAIVYSNIVTTVSPT 703

Query: 735 YAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAEN 794
           YAQEVR+ EGG+GL  TL FHSKKFVGILNGIDTD WNP+TD FLKVQYNANDLQGKA N
Sbjct: 704 YAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAAN 762

Query: 795 KESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHI 854
           K ++RK LGLSSADA +PLVGCITRLVPQKGVHLIRHAIY+T ELGGQF+LLGSSPVPHI
Sbjct: 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHI 822

Query: 855 QV 856
           Q 
Sbjct: 823 QR 824

Length = 977

>gnl\|CDD\|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type	Back alignment and domain information

>gnl\|CDD\|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|234809 PRK00654, glgA, glycogen synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|215180 PLN02316, PLN02316, synthase/transferase	Back alignment and domain information

>gnl\|CDD\|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain	Back alignment and domain information

>gnl\|CDD\|237610 PRK14099, PRK14099, glycogen synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|172588 PRK14098, PRK14098, glycogen synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|205039 pfam12718, Tropomyosin_1, Tropomyosin like	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|227512 COG5185, HEC1, Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|227512 COG5185, HEC1, Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|205039 pfam12718, Tropomyosin_1, Tropomyosin like	Back alignment and domain information

>gnl\|CDD\|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	Back alignment and domain information

>gnl\|CDD\|234173 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|129694 TIGR00606, rad50, rad50	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain (CALCOCO1) like	Back alignment and domain information

>gnl\|CDD\|234501 TIGR04211, SH3_and_anchor, SH3 domain protein	Back alignment and domain information

>gnl\|CDD\|148617 pfam07111, HCR, Alpha helical coiled-coil rod protein (HCR)	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|225638 COG3096, MukB, Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>gnl\|CDD\|205692 pfam13514, AAA_27, AAA domain	Back alignment and domain information

>gnl\|CDD\|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	Back alignment and domain information

>gnl\|CDD\|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>gnl\|CDD\|218636 pfam05557, MAD, Mitotic checkpoint protein	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	Back alignment and domain information

>gnl\|CDD\|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|205692 pfam13514, AAA_27, AAA domain	Back alignment and domain information

>gnl\|CDD\|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding	Back alignment and domain information

>gnl\|CDD\|220623 pfam10186, Atg14, UV radiation resistance protein and autophagy-related subunit 14	Back alignment and domain information

>gnl\|CDD\|220614 pfam10174, Cast, RIM-binding protein of the cytomatrix active zone	Back alignment and domain information

>gnl\|CDD\|218636 pfam05557, MAD, Mitotic checkpoint protein	Back alignment and domain information

>gnl\|CDD\|234541 TIGR04320, Surf_Exclu_PgrA, SEC10/PgrA surface exclusion domain	Back alignment and domain information

>gnl\|CDD\|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	Back alignment and domain information

>gnl\|CDD\|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		904
PLN02939		977	transferase, transferring glycosyl groups	100.0
PRK14099		485	glycogen synthase; Provisional	100.0
PRK14098		489	glycogen synthase; Provisional	100.0
PLN02316		1036	synthase/transferase	100.0
PRK00654		466	glgA glycogen synthase; Provisional	100.0
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
COG0297		487	GlgA Glycogen synthase [Carbohydrate transport and	100.0
cd03791		476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
TIGR02094		601	more_P_ylases alpha-glucan phosphorylases. This fa	100.0
PF08323		245	Glyco_transf_5: Starch synthase catalytic domain;	100.0
cd04299		778	GT1_Glycogen_Phosphorylase_like This family is mos	99.97
TIGR02472		439	sucr_P_syn_N sucrose-phosphate synthase, putative,	99.97
TIGR02470		784	sucr_synth sucrose synthase. This model represents	99.96
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	99.96
TIGR02468		1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.96
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.96
cd03796		398	GT1_PIG-A_like This family is most closely related	99.96
PRK10307		412	putative glycosyl transferase; Provisional	99.96
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.96
cd04962		371	GT1_like_5 This family is most closely related to	99.95
PLN00142		815	sucrose synthase	99.94
cd03800		398	GT1_Sucrose_synthase This family is most closely r	99.94
cd03793		590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.94
PRK10125		405	putative glycosyl transferase; Provisional	99.94
cd03812		358	GT1_CapH_like This family is most closely related	99.94
cd03819		355	GT1_WavL_like This family is most closely related	99.93
cd03802		335	GT1_AviGT4_like This family is most closely relate	99.93
cd04951		360	GT1_WbdM_like This family is most closely related	99.93
cd03805		392	GT1_ALG2_like This family is most closely related	99.93
cd04955		363	GT1_like_6 This family is most closely related to	99.93
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.93
PLN02846		462	digalactosyldiacylglycerol synthase	99.93
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	99.93
cd03792		372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.92
cd03821		375	GT1_Bme6_like This family is most closely related	99.92
cd03818		396	GT1_ExpC_like This family is most closely related	99.92
cd03795		357	GT1_like_4 This family is most closely related to	99.91
cd03807		365	GT1_WbnK_like This family is most closely related	99.91
cd03817		374	GT1_UGDG_like This family is most closely related	99.91
KOG1111		426	consensus N-acetylglucosaminyltransferase complex,	99.91
PRK09922		359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.91
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	99.9
cd03823		359	GT1_ExpE7_like This family is most closely related	99.9
cd03794		394	GT1_wbuB_like This family is most closely related	99.9
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	99.9
cd03825		365	GT1_wcfI_like This family is most closely related	99.9
cd03814		364	GT1_like_2 This family is most closely related to	99.9
cd03809		365	GT1_mtfB_like This family is most closely related	99.9
cd03799		355	GT1_amsK_like This is a family of GT1 glycosyltran	99.89
cd03801		374	GT1_YqgM_like This family is most closely related	99.89
cd03811		353	GT1_WabH_like This family is most closely related	99.88
cd03822		366	GT1_ecORF704_like This family is most closely rela	99.88
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	99.88
cd03820		348	GT1_amsD_like This family is most closely related	99.88
PLN02501		794	digalactosyldiacylglycerol synthase	99.88
cd03808		359	GT1_cap1E_like This family is most closely related	99.88
cd03798		377	GT1_wlbH_like This family is most closely related	99.88
cd03816		415	GT1_ALG1_like This family is most closely related	99.88
PRK15490		578	Vi polysaccharide biosynthesis protein TviE; Provi	99.86
TIGR03087		397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.85
PLN02275		371	transferase, transferring glycosyl groups	99.84
cd03806		419	GT1_ALG11_like This family is most closely related	99.84
cd03813		475	GT1_like_3 This family is most closely related to	99.81
PLN02949		463	transferase, transferring glycosyl groups	99.78
cd03804		351	GT1_wbaZ_like This family is most closely related	99.78
PHA01633		335	putative glycosyl transferase group 1	99.77
PHA01630		331	putative group 1 glycosyl transferase	99.76
PF05693		633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.76
TIGR02918		500	accessory Sec system glycosylation protein GtfA. M	99.75
PRK00726		357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.74
cd03788		460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.74
cd03785		350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.71
TIGR01133		348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.7
cd04946		407	GT1_AmsK_like This family is most closely related	99.69
cd04949		372	GT1_gtfA_like This family is most closely related	99.68
TIGR02400		456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.67
cd01635		229	Glycosyltransferase_GTB_type Glycosyltransferases	99.61
PRK05749		425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.59
PRK13609		380	diacylglycerol glucosyltransferase; Provisional	99.57
PLN02605		382	monogalactosyldiacylglycerol synthase	99.53
PRK14501		726	putative bifunctional trehalose-6-phosphate syntha	99.51
PF13439		177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.49
PLN03063		797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.49
PF13579		160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.46
cd04950		373	GT1_like_1 Glycosyltransferases catalyze the trans	99.45
PRK13608		391	diacylglycerol glucosyltransferase; Provisional	99.34
PRK00025		380	lpxB lipid-A-disaccharide synthase; Reviewed	99.29
TIGR02398		487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.27
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	99.26
cd03786		363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.24
TIGR00236		365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.13
TIGR00215		385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.08
PLN03064		934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.01
COG0438		381	RfaG Glycosyltransferase [Cell envelope biogenesis	98.92
KOG0853		495	consensus Glycosyltransferase [Cell wall/membrane/	98.89
PF09314		185	DUF1972: Domain of unknown function (DUF1972); Int	98.75
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	98.67
PF13477		139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.53
KOG3742		692	consensus Glycogen synthase [Carbohydrate transpor	98.43
PF13692		135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	98.43
PRK12446		352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.38
cd04300		797	GT1_Glycogen_Phosphorylase This is a family of oli	98.35
COG0058		750	GlgP Glucan phosphorylase [Carbohydrate transport	98.3
KOG1387		465	consensus Glycosyltransferase [Cell wall/membrane/	98.13
PRK14985		798	maltodextrin phosphorylase; Provisional	98.02
PRK14986		815	glycogen phosphorylase; Provisional	98.02
PRK10117		474	trehalose-6-phosphate synthase; Provisional	97.94
PF00982		474	Glyco_transf_20: Glycosyltransferase family 20; In	97.9
TIGR02093		794	P_ylase glycogen/starch/alpha-glucan phosphorylase	97.9
COG0380		486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	97.85
PF00862		550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	97.84
PF00343		713	Phosphorylase: Carbohydrate phosphorylase; InterPr	97.6
COG0707		357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	97.59
PLN02205		854	alpha,alpha-trehalose-phosphate synthase [UDP-form	97.57
PF04007		335	DUF354: Protein of unknown function (DUF354); Inte	97.36
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	97.25
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	97.25
TIGR03713		519	acc_sec_asp1 accessory Sec system protein Asp1. Th	97.25
PRK02224		880	chromosome segregation protein; Provisional	97.2
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	97.14
PRK02224		880	chromosome segregation protein; Provisional	97.12
KOG2941		444	consensus Beta-1,4-mannosyltransferase [Posttransl	97.09
PHA02562		562	46 endonuclease subunit; Provisional	97.07
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	97.0
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	96.96
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	96.95
PRK03918		880	chromosome segregation protein; Provisional	96.89
KOG0933		1174	consensus Structural maintenance of chromosome pro	96.78
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	96.65
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	96.61
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	96.61
KOG0971		1243	consensus Microtubule-associated protein dynactin	96.57
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	96.56
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	96.45
cd03784		401	GT1_Gtf_like This family includes the Gtfs, a grou	96.38
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.26
PRK03918		880	chromosome segregation protein; Provisional	96.23
KOG0996		1293	consensus Structural maintenance of chromosome pro	96.2
PRK11637		428	AmiB activator; Provisional	96.2
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.18
PF12000		171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	96.14
PF00038		312	Filament: Intermediate filament protein; InterPro:	96.09
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	96.06
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	96.05
TIGR02919		438	accessory Sec system glycosyltransferase GtfB. Mem	95.94
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	95.87
PHA02562		562	46 endonuclease subunit; Provisional	95.82
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	95.67
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	95.64
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	95.61
PF13528		318	Glyco_trans_1_3: Glycosyl transferase family 1	95.59
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	95.49
PRK04778		569	septation ring formation regulator EzrA; Provision	95.45
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	95.38
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	95.3
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	95.29
KOG0996		1293	consensus Structural maintenance of chromosome pro	95.27
PRK01156		895	chromosome segregation protein; Provisional	95.25
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	95.12
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	95.06
PRK01156		895	chromosome segregation protein; Provisional	94.82
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	94.77
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	94.76
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	94.72
KOG4673		961	consensus Transcription factor TMF, TATA element m	94.72
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	94.62
TIGR03568		365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	94.61
KOG0971		1243	consensus Microtubule-associated protein dynactin	94.52
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	94.5
PF15294		278	Leu_zip: Leucine zipper	94.4
COG0763		381	LpxB Lipid A disaccharide synthetase [Cell envelop	94.21
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	94.2
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	94.19
PRK01021		608	lpxB lipid-A-disaccharide synthase; Reviewed	94.12
PRK04863		1486	mukB cell division protein MukB; Provisional	93.97
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	93.9
PRK11637		428	AmiB activator; Provisional	93.84
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	93.79
KOG0964		1200	consensus Structural maintenance of chromosome pro	93.79
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	93.7
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	93.67
PLN03229		762	acetyl-coenzyme A carboxylase carboxyl transferase	93.66
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	93.49
TIGR00634		563	recN DNA repair protein RecN. All proteins in this	93.41
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	93.31
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	93.29
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	93.24
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	93.23
PRK09039		343	hypothetical protein; Validated	93.16
PRK04778		569	septation ring formation regulator EzrA; Provision	93.11
TIGR03492		396	conserved hypothetical protein. This protein famil	92.92
KOG0249		916	consensus LAR-interacting protein and related prot	92.92
PRK04863		1486	mukB cell division protein MukB; Provisional	92.84
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	92.74
COG5185		622	HEC1 Protein involved in chromosome segregation, i	92.74
PRK10929		1109	putative mechanosensitive channel protein; Provisi	92.66
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	92.63
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	92.39
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	92.13
KOG0018		1141	consensus Structural maintenance of chromosome pro	92.06
KOG4673		961	consensus Transcription factor TMF, TATA element m	92.05
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	92.02
KOG0933		1174	consensus Structural maintenance of chromosome pro	91.94
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	91.64
PF02684		373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	91.53
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	91.41
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	91.34
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	91.28
PRK09841		726	cryptic autophosphorylating protein tyrosine kinas	91.26
PF08288		90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	91.21
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	91.1
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	90.81
PF14662		193	CCDC155: Coiled-coil region of CCDC155	90.77
PF01496		759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	90.69
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	90.69
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	90.67
KOG4809		654	consensus Rab6 GTPase-interacting protein involved	90.64
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	90.61
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	90.61
PF11997		268	DUF3492: Domain of unknown function (DUF3492); Int	90.59
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	90.57
PRK11281		1113	hypothetical protein; Provisional	90.52
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	90.52
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	90.36
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	90.27
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	90.19
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	90.11
COG4942		420	Membrane-bound metallopeptidase [Cell division and	89.62
PRK10929		1109	putative mechanosensitive channel protein; Provisi	89.62
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	89.62
cd07627		216	BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of	89.55
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	89.42
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	89.36
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	89.28
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	89.18
PLN03229		762	acetyl-coenzyme A carboxylase carboxyl transferase	88.9
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	88.86
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	88.6
PRK11281		1113	hypothetical protein; Provisional	88.55
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	88.4
PLN02939		977	transferase, transferring glycosyl groups	88.38
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	88.06
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	88.01
PF12252		1439	SidE: Dot/Icm substrate protein; InterPro: IPR0210	88.01
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	87.96
TIGR03017		444	EpsF chain length determinant protein EpsF. Sequen	87.76
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	87.73
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	87.67
PF04912		388	Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit	87.59
PRK11519		719	tyrosine kinase; Provisional	87.56
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	87.54
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	87.51
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	87.4
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	87.13
KOG0979		1072	consensus Structural maintenance of chromosome pro	87.08
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	86.28
PF09325		236	Vps5: Vps5 C terminal like; InterPro: IPR015404 Vp	86.01
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	85.2
TIGR01000		457	bacteriocin_acc bacteriocin secretion accessory pr	84.76
cd07623		224	BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of	84.63
COG1817		346	Uncharacterized protein conserved in archaea [Func	84.59
PF13514		1111	AAA_27: AAA domain	84.44
PF10186		302	Atg14: UV radiation resistance protein and autopha	84.21
KOG4302		660	consensus Microtubule-associated protein essential	84.19
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	84.04
PRK09039		343	hypothetical protein; Validated	83.91
COG4942		420	Membrane-bound metallopeptidase [Cell division and	83.82
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	83.32
KOG0963		629	consensus Transcription factor/CCAAT displacement	83.24
KOG3156		220	consensus Uncharacterized membrane protein [Functi	83.22
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	83.16
cd00176		213	SPEC Spectrin repeats, found in several proteins i	83.08
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	82.93
PF06705		247	SF-assemblin: SF-assemblin/beta giardin	82.47
COG0497		557	RecN ATPase involved in DNA repair [DNA replicatio	82.32
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	82.3
cd07665		234	BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of S	82.3
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	82.0
PF13844		468	Glyco_transf_41: Glycosyl transferase family 41; P	81.89
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	81.4
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	81.4
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	81.14
PF05278		269	PEARLI-4: Arabidopsis phospholipase-like protein (	80.67
COG5185		622	HEC1 Protein involved in chromosome segregation, i	80.54
COG1519		419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	80.48
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	80.25
cd07647		239	F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/	80.05
COG4717		984	Uncharacterized conserved protein [Function unknow	80.03

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

Probab=100.00  E-value=7.4e-206  Score=1815.32  Aligned_cols=855  Identities=67%  Similarity=1.033  Sum_probs=786.8

Q ss_pred             CCcccccccccCcceeecccCCCCcCCccccccccccccccccccccccCCCchhHHhhhcccCCCCCCCCCCCCCccCC
Q 002589            1 MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTS   80 (904)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~k~~~~k~~~~~~~~~~~~~~~~~~   80 (904)
                      ||.+-++||++|||+++.|          +.+||+|+||++|+||+||||+|||||||||+|+++|+| ||+|++||+|+
T Consensus         1 ~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   69 (977)
T PLN02939          1 AAAAESAALLSHGCGPIRS----------RAPFYLPSRRRLAVSCRARRRGFSSQQKKKRGKNIAPKQ-RSSNSKLQSNT   69 (977)
T ss_pred             CchhhhhhHhhcccccccc----------CCCCCCchhccccccccccCCCchhhhhhhhccCCCCcc-cccccccccCc
Confidence            5778899999999999954          668999999999999999999999999999999999998 99999999999


Q ss_pred             CCCCcccccccCC--CCC-Ccccccccccc-cccccccccccc----cccCCCccccccchhHHHHHHHhhhhhHHHHHH
Q 002589           81 DGDSESESSLIDR--EPI-DVEHTEEQNLG-SVFVPELKESLV----LNCDGGEELSTSQLDNLISMIRNAEKNILLLNE  152 (904)
Q Consensus        81 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (904)
                      |||+|+||++.++  +.| +.|+.+.+.+. +...++.+.+..    -+..+|+|+|++|||||+|||||||||||||||
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (977)
T PLN02939         70 DENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQ  149 (977)
T ss_pred             cccccccccccccccccccCCCCccccccchhhcchhhhccccHhhhhccccccccccccHHHHHHHHHHHHhhhHhHHH
Confidence            9999999999986  444 44554444443 223334433332    367889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhchhhhhhhhhhhhhhHhhhHHHHHHHHHHhhhcccCcccchhhhccCCC
Q 002589          153 ARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNE  232 (904)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (904)
                      ||++||+||+|||+|||+||||||||||||||||+|+|+++|+++||||+|+|||||||||+++++++|+          
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  219 (977)
T PLN02939        150 ARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGL----------  219 (977)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhhhhhhhhccccchhhHHHHHHHhhhhhcccccccc----------
Confidence            9999999999999999999999999999999999999999999999999999999999999999999754          


Q ss_pred             CcccccccCCcccchhhHhhhhhhhhhccchhHHHHHHHHhhhhhhhhhHHHHHHhhhhhHHhhHHHHHhhhhcchhhhh
Q 002589          233 PANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVA  312 (904)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (904)
                                 .+|+|++||++||+|||+||+||++||++|++|++|+||+++|||||++|+++|+|||+||++||+||+
T Consensus       220 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (977)
T PLN02939        220 -----------CVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVS  288 (977)
T ss_pred             -----------ccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence                       577999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHhhhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhhhhhchHHHHHHHHHHHHHHHH
Q 002589          313 KLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKL  392 (904)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (904)
                      ||+||++||  |||||||||+||++||||+|+|++||+||||||+|||+||+||+|||+||+||+++    ++||||+|+
T Consensus       289 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  362 (977)
T PLN02939        289 KLSPLQYDC--WWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKV----ELLQQKLKL  362 (977)
T ss_pred             hccchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhHhhhhHHHH----HHHHHHHHH
Confidence            999999998  99999999999999999999999999999999999999999999999999999977    999999999


Q ss_pred             HHHhhccchHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhcccCCCCCCCChHHHHHHHHHhhhhhhhcccChHHHHHHHH
Q 002589          393 LEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLRE  472 (904)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~d~~~~~~~~~~~~a~~l~~  472 (904)
                      +|||+|+||+||+||+++|++||++||++|++|++|++|++.++|+++|||+|||+||||||+|+|+++|+++||+.||+
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~  442 (977)
T PLN02939        363 LEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLRE  442 (977)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCcchhhhHHhhhhhhhhhHHhhhhccCCCCCCCCeEEEEcCccCCCcCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 002589          473 MVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVL  552 (904)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~MkILhIt~E~~P~akvGGLg~vV~~LarAL~k~GHeV~VIt  552 (904)
                      |||+|+.+++++|++|++++|+|++++|++|+.+.++++|||+|||+|++|++++||+|+|+.+|+++|+++||+|+||+
T Consensus       443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIl  522 (977)
T PLN02939        443 MVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVL  522 (977)
T ss_pred             HHHhhhhhHHHHHHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCcccccccccccceeeecccCCccccceeeeeeeCCeeEEEeCCCCCCcccccCCCCCCCcchhhHHHHHHHHHH
Q 002589          553 PKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALE  632 (904)
Q Consensus       553 P~y~~l~~~~v~~L~~l~i~v~s~fdG~~~~~~V~~g~v~GV~V~fIdp~~Ps~~F~r~~iYg~~dd~~Rfs~FsraaLe  632 (904)
                      |.|+++....+..++.....+..+|.|..+.++||.+.++||++|||+++||+.||+|+.+|++.|++.||++||+++++
T Consensus       523 P~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe  602 (977)
T PLN02939        523 PKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALE  602 (977)
T ss_pred             CCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHH
Confidence            99998764444444433334445567766678999999999999999987776689999999999999999999999999


Q ss_pred             HHHHhCCCccEEEEcCCchhhHHHHHHHhhccCCCCCCeEEEEecCCcccCCCChhhhhhcCCcccccCCcccccccccc
Q 002589          633 LLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAH  712 (904)
Q Consensus       633 ~Lrq~g~kPDIIHaHdW~talvapL~~~~ya~~gL~giPiV~TIHnl~~qG~~p~~~L~~~GL~~~~l~~~drLqd~~~~  712 (904)
                      ++.+.+++|||||||||++++++|+++..|+..++.++|+|+||||+.|||.++...+..+|+++.+++++++++++ ++
T Consensus       603 ~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~-~~  681 (977)
T PLN02939        603 LLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN-AH  681 (977)
T ss_pred             HHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc-cC
Confidence            99988899999999999999998999887766667789999999999999999888888899999888778888765 67


Q ss_pred             cchhhhhHHhhhcCEEEEcCHHHHHHHHhhcCCCCcccccccCCCeEEEEecCccCCCCCCCccchhhhccccccccchh
Q 002589          713 DRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKA  792 (904)
Q Consensus       713 ~~in~lK~ai~~AD~VItVS~syaeeI~~~~~g~GL~~~L~~~~~Ki~VIPNGID~d~F~P~~d~~L~~~ys~ddl~gK~  792 (904)
                      +++|++++|+.+||.|+||||+|++++.+ .+|+||++++..++.|+.+||||||++.|+|.+|++++.+|+++++.||.
T Consensus       682 ~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~  760 (977)
T PLN02939        682 GRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKA  760 (977)
T ss_pred             CchHHHHHHHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhh
Confidence            89999999999999999999999999998 78899999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHcCCCCCCCCCcEEEEEecccCccCHHHHHHHHHHhhcCCcEEEEEecCCcccccH----------------
Q 002589          793 ENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHIQV----------------  856 (904)
Q Consensus       793 ~~K~aLRk~LGL~~~d~d~plVgfVGRL~~qKGIdlLIeAiarLle~nvqLVLVGdGp~~~lek----------------  856 (904)
                      .||.++|+++|++..+++.|+|+||||++++||++++++|+..+.+.+++|+|+|+|+.+.++.                
T Consensus       761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~  840 (977)
T PLN02939        761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIR  840 (977)
T ss_pred             hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEE
Confidence            9999999999998422467999999999999999999999999877789999999997532110                


Q ss_pred             ----------HHHHHhcCeEEEcCCCCCChHHHHHHccCCccc-ccCCCc
Q 002589          857 ----------YPILLSSFSFLRKHIFNICNLYIKLGQGGDLTV-NNNCEP  895 (904)
Q Consensus       857 ----------e~LyAaADVfVlPS~~EpFGLv~LEAMg~gl~V-~~~v~~  895 (904)
                                ..+|++||+||+||+|||||+++||||++|+|+ ...+.|
T Consensus       841 FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG  890 (977)
T PLN02939        841 LILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG  890 (977)
T ss_pred             EEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC
Confidence                      069999999999999999999999999999554 444444

>PRK14099 glycogen synthase; Provisional	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02094 more_P_ylases alpha-glucan phosphorylases	Back alignment and domain information

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2	Back alignment and domain information

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences	Back alignment and domain information

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain	Back alignment and domain information

>TIGR02470 sucr_synth sucrose synthase	Back alignment and domain information

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK10307 putative glycosyl transferase; Provisional	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN00142 sucrose synthase	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

>PRK10125 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>PLN02846 digalactosyldiacylglycerol synthase	Back alignment and domain information

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]	Back alignment and domain information

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional	Back alignment and domain information

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02501 digalactosyldiacylglycerol synthase	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>PLN02275 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02949 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PHA01633 putative glycosyl transferase group 1	Back alignment and domain information

>PHA01630 putative group 1 glycosyl transferase	Back alignment and domain information

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3	Back alignment and domain information

>TIGR02918 accessory Sec system glycosylation protein GtfA	Back alignment and domain information

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	Back alignment and domain information

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor	Back alignment and domain information

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis	Back alignment and domain information

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	Back alignment and domain information

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding	Back alignment and domain information

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	Back alignment and domain information

>PRK13609 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PLN02605 monogalactosyldiacylglycerol synthase	Back alignment and domain information

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional	Back alignment and domain information

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A	Back alignment and domain information

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A	Back alignment and domain information

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK13608 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)	Back alignment and domain information

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase	Back alignment and domain information

>TIGR00215 lpxB lipid-A-disaccharide synthase	Back alignment and domain information

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like	Back alignment and domain information

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A	Back alignment and domain information

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	Back alignment and domain information

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases	Back alignment and domain information

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PRK14985 maltodextrin phosphorylase; Provisional	Back alignment and domain information

>PRK14986 glycogen phosphorylase; Provisional	Back alignment and domain information

>PRK10117 trehalose-6-phosphate synthase; Provisional	Back alignment and domain information

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases	Back alignment and domain information

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2	Back alignment and domain information

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>TIGR02919 accessory Sec system glycosyltransferase GtfB	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PF15294 Leu_zip: Leucine zipper	Back alignment and domain information

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>TIGR00634 recN DNA repair protein RecN	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>TIGR03492 conserved hypothetical protein	Back alignment and domain information

>KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional	Back alignment and domain information

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>TIGR03017 EpsF chain length determinant protein EpsF	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []	Back alignment and domain information

>PRK11519 tyrosine kinase; Provisional	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein	Back alignment and domain information

>cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2	Back alignment and domain information

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]	Back alignment and domain information

>PF13514 AAA_27: AAA domain	Back alignment and domain information

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking	Back alignment and domain information

>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>KOG3156 consensus Uncharacterized membrane protein [Function unknown]	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PF06705 SF-assemblin: SF-assemblin/beta giardin	Back alignment and domain information

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins	Back alignment and domain information

>COG4717 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		904
1rzu_A		485	Crystal Structure Of The Glycogen Synthase From A.		1e-29
1rzv_A		485	Crystal Structure Of The Glycogen Synthase From Agr		1e-27
3d1j_A		477	Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408		4e-26
2qzs_A		485	Crystal Structure Of Wild-Type E.Coli Gs In Complex		4e-26
3cop_A		485	Crystal Structure Of E.Coli Gs Mutant E377a In Comp		5e-26
3vue_A		536	Crystal Structure Of Rice Granule Bound Starch Synt		4e-22
3fro_A		439	Crystal Structure Of Pyrococcus Abyssi Glycogen Syn		6e-04
2bis_A		440	Structure Of Glycogen Synthase From Pyrococcus Abys		7e-04
3l01_A		428	Crystal Structure Of Monomeric Glycogen Synthase Fr		8e-04

>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485