Citrus Sinensis ID: 002660
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 895 | 2.2.26 [Sep-21-2011] | |||||||
| O22060 | 1057 | Probable sucrose-phosphat | N/A | no | 0.989 | 0.838 | 0.995 | 0.0 | |
| Q43845 | 1053 | Probable sucrose-phosphat | N/A | no | 0.982 | 0.834 | 0.790 | 0.0 | |
| Q43876 | 1059 | Probable sucrose-phosphat | N/A | no | 0.988 | 0.835 | 0.805 | 0.0 | |
| O04932 | 1054 | Probable sucrose-phosphat | N/A | no | 0.977 | 0.830 | 0.772 | 0.0 | |
| Q94BT0 | 1043 | Sucrose-phosphate synthas | yes | no | 0.970 | 0.833 | 0.783 | 0.0 | |
| P31928 | 1056 | Sucrose-phosphate synthas | N/A | no | 0.974 | 0.825 | 0.744 | 0.0 | |
| P49031 | 1045 | Probable sucrose-phosphat | N/A | no | 0.974 | 0.834 | 0.746 | 0.0 | |
| Q6ZHZ1 | 1066 | Probable sucrose-phosphat | yes | no | 0.967 | 0.812 | 0.707 | 0.0 | |
| Q9FY54 | 1047 | Probable sucrose-phosphat | no | no | 0.967 | 0.827 | 0.709 | 0.0 | |
| O04933 | 1081 | Probable sucrose-phosphat | N/A | no | 0.972 | 0.804 | 0.582 | 0.0 |
| >sp|O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1827 bits (4733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 882/886 (99%), Positives = 884/886 (99%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM
Sbjct: 232 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA
Sbjct: 292 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI
Sbjct: 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT
Sbjct: 412 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL
Sbjct: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLLVDPHDQQS+ADALLKLVA KQLWARCRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIAGCKPRHPQWQR DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK
Sbjct: 652 SWPEHCKTYLSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR
Sbjct: 712 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 771
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL
Sbjct: 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD
Sbjct: 832 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 891
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR+
Sbjct: 892 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRV 951
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS
Sbjct: 952 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 1011
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 895
NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV
Sbjct: 1012 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Citrus unshiu (taxid: 55188) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q43845|SPSA_SOLTU Probable sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1482 bits (3837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/887 (79%), Positives = 796/887 (89%), Gaps = 8/887 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTE L P ++D M +MGESSGAYIIRIPFGP++KYI KE LWP+IPEFVDGALNHII+M
Sbjct: 232 PTE-LAPISTDGLMTEMGESSGAYIIRIPFGPREKYIPKEQLWPYIPEFVDGALNHIIQM 290
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIG G PVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL Q
Sbjct: 291 SKVLGEQIGSGYPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLAQG 350
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
R S+DEIN+TYKIMRRIEAEEL+LDASEIVITSTRQEI+EQWRLYDGFDP+LERKLRARI
Sbjct: 351 RKSKDEINSTYKIMRRIEAEELTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARI 410
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYG+FMPRMA+IPPGMEFHHIVP +GDMDGETEG+ED +PDPPIW+EIMRFF+
Sbjct: 411 KRNVSCYGRFMPRMAVIPPGMEFHHIVPHEGDMDGETEGSEDG-KTPDPPIWAEIMRFFS 469
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKN+TTLVKAFGECRPLR+LANLTLIMGNRD IDEMSST++++LL
Sbjct: 470 NPRKPMILALARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLL 529
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
S+LK+IDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+G
Sbjct: 530 SILKMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYG 589
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VATKNGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLVADKQLWA+CR NGLKNIHLF
Sbjct: 590 LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAKCRANGLKNIHLF 649
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDGE 548
SWPEHCKTYLSRIA CKPR P+W R+ DD E SE+DSP DSLRDI DISLNL+FSLDGE
Sbjct: 650 SWPEHCKTYLSRIASCKPRQPRWLRSIDDDDENSETDSPSDSLRDIHDISLNLRFSLDGE 709
Query: 549 KSGASGN-DDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPA 607
K+ N D++LD E R+S+LENAVL+ SKG LK T KS S+DK DQN GA KFPA
Sbjct: 710 KNDNKENADNTLDPEV----RRSKLENAVLSLSKGALKSTSKSWSSDKADQNPGAGKFPA 765
Query: 608 LRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG 667
+RRR+HIFVI+VDCD+++GL + KKI EAVEKER EGSIGFIL+TS ISE+ SFL+S
Sbjct: 766 IRRRRHIFVIAVDCDASSGLSGSVKKIFEAVEKERAEGSIGFILATSFNISEVQSFLLSE 825
Query: 668 HLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV 727
++P+DFDA+ICNSG DLYYS+ +SE PFVVD YYHSHIEYRWGGEGLRKTLVRWA+ +
Sbjct: 826 GMNPTDFDAYICNSGGDLYYSSFHSEQNPFVVDLYYHSHIEYRWGGEGLRKTLVRWAASI 885
Query: 728 TDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGS 787
DK E+G+ ++ E S +YCY F V KPG PP KELRKV+RIQALRCH +YCQNGS
Sbjct: 886 IDKNGENGDHIVVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMRIQALRCHAVYCQNGS 945
Query: 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSS 847
RINVIPVLASRSQALRYLYLRWG++LSK+VVFVGESGDTDYEGL+GG+ K VI+KG+C++
Sbjct: 946 RINVIPVLASRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGLRKAVIMKGLCTN 1005
Query: 848 SSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
+S+ IH NR+YPLSDV+P DSPN++Q E+C++++IR LE+L +LK
Sbjct: 1006 ASSLIHGNRNYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLAVLK 1052
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q43876|SPSA_VICFA Probable sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1476 bits (3821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/886 (80%), Positives = 810/886 (91%), Gaps = 1/886 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGE
Sbjct: 173 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGE 232
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEML PRN+D+F DDMGESSGAYIIRIPFGP++KYI KE LWP+IPEFVDGA+ HII+M
Sbjct: 233 PTEMLAPRNTDEFGDDMGESSGAYIIRIPFGPRNKYIPKEELWPYIPEFVDGAMGHIIQM 292
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S LGEQIG G VWPVAIHGHYADAGDSAALLSGALNVPM+FTGHSLGRDKLEQLLKQ
Sbjct: 293 SKALGEQIGSGHAVWPVAIHGHYADAGDSAALLSGALNVPMIFTGHSLGRDKLEQLLKQG 352
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLS DEIN+TYKIMRRIEAEEL+LD +EIVITSTRQEIEEQWRLY+GFDPVLERK+RARI
Sbjct: 353 RLSTDEINSTYKIMRRIEAEELALDGTEIVITSTRQEIEEQWRLYNGFDPVLERKIRARI 412
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG++MPRM++IPPGMEFHHI P DGD++ E EG D+PA DPPIWSEIMRFF+
Sbjct: 413 RRNVSCYGRYMPRMSVIPPGMEFHHIAPLDGDIETEPEGILDHPAPQDPPIWSEIMRFFS 472
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS+SVLL
Sbjct: 473 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLL 532
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+G
Sbjct: 533 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYG 592
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VATKNGGPVDIHRVLDNGLL+DPHD++S+ADALLKLV++KQLWA+CRQNGLKNIHLF
Sbjct: 593 LPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALLKLVSNKQLWAKCRQNGLKNIHLF 652
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQR-NDDGGETSESDSPGDSLRDIQDISLNLKFSLDGE 548
SWPEHCKTYLS+IA CKPRHPQWQR D G + +SPGDSLRDIQD+SLNLKFSLDGE
Sbjct: 653 SWPEHCKTYLSKIATCKPRHPQWQRSEDGGESSESEESPGDSLRDIQDLSLNLKFSLDGE 712
Query: 549 KSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608
+SG SGND+SLD +GN DR ++LENAVL+WSKG+ KDTR+ G+T+K QN+ A+KFP L
Sbjct: 713 RSGDSGNDNSLDPDGNATDRTTKLENAVLSWSKGISKDTRRGGATEKSGQNSNASKFPPL 772
Query: 609 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 668
R R +FVI+VDCD+T+GLL+ K I EA +ER EGS+GFILSTS+TISEI SFL+SG
Sbjct: 773 RSRNRLFVIAVDCDTTSGLLEMIKLIFEAAGEERAEGSVGFILSTSLTISEIQSFLISGG 832
Query: 669 LSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT 728
LSP+DFDA+ICNSGSDLYY +LNSED FV D Y+HSHIEYRWGGEGLRKTL+RWAS +T
Sbjct: 833 LSPNDFDAYICNSGSDLYYPSLNSEDRLFVGDLYFHSHIEYRWGGEGLRKTLIRWASSIT 892
Query: 729 DKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR 788
DKK+E+ E++++PAEQLST+YCYAF+V+K GM PP+KELRK++RIQALRCH IYCQNG+R
Sbjct: 893 DKKSENNEQIVSPAEQLSTDYCYAFNVRKAGMAPPLKELRKLMRIQALRCHPIYCQNGTR 952
Query: 789 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848
+NVIPVLASRSQALRYLY+RWG ELSKMVVFVGE GDTDYEGL+GG+HK+VILKG+ S +
Sbjct: 953 LNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRA 1012
Query: 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
+Q+H NR+YPLSDVMP+DSPNIVQ E +++DI++ LE++G K
Sbjct: 1013 ISQLHNNRNYPLSDVMPLDSPNIVQATEGSSSADIQALLEKVGYHK 1058
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Vicia faba (taxid: 3906) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04932|SPSA1_CRAPL Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1453 bits (3762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/894 (77%), Positives = 781/894 (87%), Gaps = 19/894 (2%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEML PRNS++ MD+MGESSG+YI+RIPFGPKDKY+AKELLWPHIPEFVDGAL HII+M
Sbjct: 232 PTEMLPPRNSENMMDEMGESSGSYIVRIPFGPKDKYVAKELLWPHIPEFVDGALGHIIQM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIG G P+WP AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL+Q
Sbjct: 292 SKVLGEQIGNGHPIWPAAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLRQG 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN+TYKIMRRIEAEELSLDASE+VITSTRQEIEEQWRLYDGFDP+LERKLRARI
Sbjct: 352 RLSRDEINSTYKIMRRIEAEELSLDASEMVITSTRQEIEEQWRLYDGFDPILERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYG+FMPRM +IPPGMEFHHIVP DGD+D E E NED+ SPDP IW+EIMRFF+
Sbjct: 412 KRNVSCYGRFMPRMMVIPPGMEFHHIVPHDGDLDAEPEFNEDS-KSPDPHIWTEIMRFFS 470
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKN+TTLVKAFGEC+PLRELANLTLIMGNRD IDEMS T+ASVLL
Sbjct: 471 NPRKPMILALARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLL 530
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
S+LK+IDKYDLYG VAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 531 SILKMIDKYDLYGLVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 590
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNG+LVDPH+Q+S+ADALLKLVA+K LWA+CR NGLKNIHLF
Sbjct: 591 LPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALLKLVAEKHLWAKCRANGLKNIHLF 650
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDG- 547
SWPEHCK+YLS++A CKPR P+W RN +D E SESDSP DSLRDIQDISLNLKFS DG
Sbjct: 651 SWPEHCKSYLSKLASCKPRQPRWLRNEEDDDENSESDSPSDSLRDIQDISLNLKFSFDGD 710
Query: 548 -----EKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGA 602
EK G S D DR S++ENAVL WSKGV K ++S S +K + N+ A
Sbjct: 711 KNESREKGGGSHPD----------DRASKIENAVLEWSKGVAKGPQRSMSIEKGEHNSNA 760
Query: 603 AKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHS 662
KFPALRRRK +FVI+VDC + GL ++ +K+ AVE ER EGS+GFIL+TS ISEI
Sbjct: 761 GKFPALRRRKIMFVIAVDCKPSAGLSESVRKVFAAVENERAEGSVGFILATSFNISEIRH 820
Query: 663 FLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR 722
FLVS L+P+DFDAFICNSG DLYYS+ +SED PFVVD YYHS IEYRWGGEGLRKTLVR
Sbjct: 821 FLVSEKLNPTDFDAFICNSGGDLYYSSHHSEDNPFVVDLYYHSQIEYRWGGEGLRKTLVR 880
Query: 723 WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIY 782
WA+ +TDKK E E V+ E+ S +YCY+F VQKP + PPVKE RKV+RIQALRCHV+Y
Sbjct: 881 WAASITDKKGEKEEHVIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQALRCHVVY 940
Query: 783 CQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842
CQNG++INVIPVLASR+QALRYLYLRWG+ELSK VV VGESGDTDYE +LGGVHKTV+L
Sbjct: 941 CQNGNKINVIPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVHKTVVLS 1000
Query: 843 GICSSSSNQIHANRSYPLSDVMPIDSPNIVQT-PEDCTTSDIRSSLEQLGLLKV 895
G+C++++N +HANRSYPL+DV+ D NI +T E+C+++D+R+ LE+ G K
Sbjct: 1001 GVCTTATNLLHANRSYPLADVVCFDDLNIFKTHNEECSSTDLRALLEEHGAFKA 1054
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q94BT0|SPSA1_ARATH Sucrose-phosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1432 bits (3707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/885 (78%), Positives = 796/885 (89%), Gaps = 16/885 (1%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD+SYGE
Sbjct: 174 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGE 233
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTPR+S+DF D+MGESSGAYI+RIPFGPKDKYI KELLWPHIPEFVDGA++HI++M
Sbjct: 234 PTEMLTPRDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQM 293
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+G GKP+WP AIHGHYADAGD+ ALLSGALNVPML TGHSLGRDKLEQLL+Q
Sbjct: 294 SNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQG 353
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLS++EIN+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARI
Sbjct: 354 RLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARI 413
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYG+FMPRM IPPGMEF+HIVP GDM+ +T+GNE++P SPDPPIW+EIMRFF+
Sbjct: 414 KRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFS 472
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
N RKP+ILALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRDGIDEMSSTS+SVLL
Sbjct: 473 NSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLL 532
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAK+KGVFINPA IEPFGLTLIEAAAHG
Sbjct: 533 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHG 592
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VATKNGGPVDIHRVLDNGLLVDPHDQQS+++ALLKLVADK LWA+CRQNGLKNIH F
Sbjct: 593 LPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQF 652
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRI KPRHPQWQ +DDGG+ SE +SP DSLRDIQDISLNLKFS DG
Sbjct: 653 SWPEHCKTYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDG-- 709
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SGND+ ++ EG+ DRKS++E AV WSKG KD+RK GS ++ + N+G KFPA+R
Sbjct: 710 ---SGNDNYMNQEGSSMDRKSKIEAAVQNWSKG--KDSRKMGSLERSEVNSG--KFPAVR 762
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRK I VI++D D L+ATK+I +AVEKER EGS+GFILSTS+TISE+ SFLVSG L
Sbjct: 763 RRKFIVVIALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGL 822
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
+P+DFDAFICNSGSDL+Y++LN+EDGPFVVDFYYHSHIEYRWGGEGLRKTL+RWAS + +
Sbjct: 823 NPNDFDAFICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNE 882
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKA++ E+++T AE LST+YCY F+V+KP PPV+ELRK+LRIQALRCHV+Y QNG+RI
Sbjct: 883 KKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRI 942
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASR QALRYL++RWG++++KM VFVGESGDTDYEGLLGG+HK+V+LKG+ S+
Sbjct: 943 NVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSAC 1002
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
+HANRSYPL+DV+ +S N+V D SD+R +L++L LLK
Sbjct: 1003 --LHANRSYPLTDVISFESNNVVHASPD---SDVRDALKKLELLK 1042
|
Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31928|SPSA_SPIOL Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1368 bits (3542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/887 (74%), Positives = 755/887 (85%), Gaps = 15/887 (1%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAP VDWSYGE
Sbjct: 180 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPGVDWSYGE 239
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEML+ RNS++ + +GESSGAYIIRIPFGPKDKY+AKELLWP+IPEFVDGAL+HI +M
Sbjct: 240 PTEMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQM 299
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIGGG PVWP ++HGHYADAGDSAALLSGALNVPM+FTGHSLGRDKL+QLLKQ
Sbjct: 300 SKVLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQG 359
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSR+E++ATYKIMRRIEAEEL LDASEIVITSTRQEIEEQW+LY GFD VLERKLRAR+
Sbjct: 360 RLSREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRARM 419
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+R VSC+G+FMPRMA IPPGMEF+HI P+D DMD + +G++++ A+PDP IWSEIMRFF+
Sbjct: 420 RRGVSCHGRFMPRMAKIPPGMEFNHIAPEDADMDTDIDGHKESNANPDPVIWSEIMRFFS 479
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
N RKP+ILALARPDPKKN+TTLVKAFGECRPLRELANLTLI+GNRD IDEMS+TS+SVL+
Sbjct: 480 NGRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLI 539
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
S+LKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+G
Sbjct: 540 SILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYG 599
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDI VLDNGLL+DPHDQ+S+ADALLKLVADK LW +CRQNGLKNIHLF
Sbjct: 600 LPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALLKLVADKHLWTKCRQNGLKNIHLF 659
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCK YLSRIA CKPR P WQR D+G E S++DS GDSLRDIQDISLNLK SLD E+
Sbjct: 660 SWPEHCKNYLSRIASCKPRQPNWQRIDEGSENSDTDSAGDSLRDIQDISLNLKLSLDAER 719
Query: 550 S-GASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608
+ G + DDSLDSE A+ K ++ENAV SK S DK + G KFPA+
Sbjct: 720 TEGGNSFDDSLDSEE--ANAKRKIENAVAKLSK----------SMDKAQVDVGNLKFPAI 767
Query: 609 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 668
RRRK IFVI++DCD T+ LL K + V ++R GSIGFILSTSMT+SE+ S L SG
Sbjct: 768 RRRKCIFVIALDCDVTSDLLQVIKTVISIVGEQRPTGSIGFILSTSMTLSEVDSLLDSGG 827
Query: 669 LSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT 728
L P+DFDAFICNSGS+LYY + + + PFV+D Y+SHI+YRWGGEGL KTLV+WA+ V
Sbjct: 828 LRPADFDAFICNSGSELYYPSTDYSESPFVLDQDYYSHIDYRWGGEGLWKTLVKWAASVN 887
Query: 729 DKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR 788
+KK E+ ++ E ST +CYAF V + PP KELRK++RIQALRCH IYCQNG+R
Sbjct: 888 EKKGENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTR 947
Query: 789 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848
+NVIPVLASRSQALRYL++RWGVELS VVFVGESGDTDYEGLLGGVHKTVILKGI S++
Sbjct: 948 LNVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHKTVILKGIGSNT 1007
Query: 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 895
SN HA R+YP+ VMP+DSPN+ QT C DI +L ++G LK
Sbjct: 1008 SN-FHATRAYPMEHVMPVDSPNMFQTG-GCNIDDISDALSKIGCLKA 1052
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P49031|SPSA_BETVU Probable sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1338 bits (3464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/885 (74%), Positives = 761/885 (85%), Gaps = 13/885 (1%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGE
Sbjct: 167 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGE 226
Query: 70 PTEMLTPRNSDDFMD---DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHI 126
PTEML PR+S+ F D +MGESSGAYI+RIPFGP+DKYIAKE LWP+IPEFVDGALNHI
Sbjct: 227 PTEMLNPRDSNGFDDDDDEMGESSGAYIVRIPFGPRDKYIAKEELWPYIPEFVDGALNHI 286
Query: 127 IRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186
++MS VLGEQIG G+ VWPVAIHGHYADAGDSAALLSG LNVPML TGHSLGRDKLEQLL
Sbjct: 287 VQMSKVLGEQIGSGETVWPVAIHGHYADAGDSAALLSGGLNVPMLLTGHSLGRDKLEQLL 346
Query: 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLR 246
KQ R+S+D+IN TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFDPVLERKLR
Sbjct: 347 KQGRMSKDDINNTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLR 406
Query: 247 ARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR 306
AR+KR VSCYG+FMPRM +IPPGMEF+HIVP +GDMDGETE E++P SPDPPIW+EIMR
Sbjct: 407 ARMKRGVSCYGRFMPRMVVIPPGMEFNHIVPHEGDMDGETEETEEHPTSPDPPIWAEIMR 466
Query: 307 FFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS 366
FF+ PRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS+S
Sbjct: 467 FFSKPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSS 526
Query: 367 VLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 426
VLLSVLKLID+YDLYGQVAYPKHHKQ+DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA
Sbjct: 527 VLLSVLKLIDQYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 586
Query: 427 AHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486
AHGLP+VATKNGGPVDI RVLDNGLLVDPH+QQS+A ALLKLVADKQLW +C+QNGLKNI
Sbjct: 587 AHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALLKLVADKQLWTKCQQNGLKNI 646
Query: 487 HLFSWPEHCKTYLSRIAGCKPRHPQWQR-NDDGGETSESDSPGDSLRDIQDISLNLKFSL 545
HL+SWPEH KTYLSRIA + R PQWQR +D+G + E +SP DSLRDI+DISLNL+ +
Sbjct: 647 HLYSWPEHSKTYLSRIASSRQRQPQWQRSSDEGLDNQEPESPSDSLRDIKDISLNLEVLV 706
Query: 546 DGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKF 605
EK +L G + SR+ + +WS GV K RK+ +DKVDQ ++K+
Sbjct: 707 RPEK-----RVKTLKILGLMTKANSRM--LLCSWSNGVHKMLRKARFSDKVDQ--ASSKY 757
Query: 606 PALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLV 665
PA RRRK I+VI+VD D GL D ++I +A KE+ EGSIGFILSTS ++ EI ++L+
Sbjct: 758 PAFRRRKLIYVIAVDGDYEDGLFDIVRRIFDAAGKEKIEGSIGFILSTSYSMPEIQNYLL 817
Query: 666 SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 725
S + DFDA+ICNSGS+LYYS+LNSE+ + D YHSHIEYRWGGEGLR+TL+RWA+
Sbjct: 818 SKGFNLHDFDAYICNSGSELYYSSLNSEESNIIADSDYHSHIEYRWGGEGLRRTLLRWAA 877
Query: 726 QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 785
+T+K E+ E+V+T E++ST YC+AF ++ PP KELRK +RIQALRCHVIYCQN
Sbjct: 878 SITEKNGENEEQVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQN 937
Query: 786 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 845
GS++NVIPVLASRSQALRYLY+RWGVELSKMVVFVGE GDTDYEGLLGGVHKTVILKG+
Sbjct: 938 GSKMNVIPVLASRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHKTVILKGVS 997
Query: 846 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890
+++ +HANRSYPLS V+ +DSPNI + + C++S+I+S + +L
Sbjct: 998 NTALRSLHANRSYPLSHVVSLDSPNIGEVSKGCSSSEIQSIVTKL 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q6ZHZ1|SPSA4_ORYSJ Probable sucrose-phosphate synthase 4 OS=Oryza sativa subsp. japonica GN=SPS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1297 bits (3356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/891 (70%), Positives = 723/891 (81%), Gaps = 25/891 (2%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
SIHGLIRGENMELGRDSDTGGQVKYVVELARALGS PGVYRVDLLTRQ+SAPDVDWSYGE
Sbjct: 192 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSTPGVYRVDLLTRQISAPDVDWSYGE 251
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEML+PRNS++F DMGESSGAYI+RIPFGP+DKYI KE LWPHI EFVDGAL HI++M
Sbjct: 252 PTEMLSPRNSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQM 311
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQ+G G+ VWPV IHGHYADAGDSAALLSGALNVPM+FTGHSLGRDKLEQLLKQ
Sbjct: 312 SKVLGEQVGSGQLVWPVVIHGHYADAGDSAALLSGALNVPMIFTGHSLGRDKLEQLLKQG 371
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
R +RDEIN YKIMRRIEAEEL LDASEI+ITSTRQEIE+QW LYDGFD + RKLRARI
Sbjct: 372 RQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIEQQWGLYDGFDLTMARKLRARI 431
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KR VSCYG++MPRM +PPGMEF HIVP D D DGE E NED S DPPIW++IMRFF+
Sbjct: 432 KRGVSCYGRYMPRMIAVPPGMEFSHIVPHDVDQDGE-EANEDGSGSTDPPIWADIMRFFS 490
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNITTLVKAFGE R LR LANLTLIMGNRD IDEMSST+++VL
Sbjct: 491 NPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTLIMGNRDVIDEMSSTNSAVLT 550
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
S+LKLIDKYDLYGQVAYPKHHKQS+VP+IYRLAA+TKGVFIN AFIEPFGLTLIEAAA+G
Sbjct: 551 SILKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGVFINCAFIEPFGLTLIEAAAYG 610
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VAT+NGGPVDIHRVLDNG+LVDPH+Q +A+AL KLV+DKQLWA+CRQNGLKNIH F
Sbjct: 611 LPMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYKLVSDKQLWAQCRQNGLKNIHQF 670
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCK YLSR+ KPRHP+WQ++DD E SE+DSPGDSLRD+ DISLNLK SLD EK
Sbjct: 671 SWPEHCKNYLSRVGTLKPRHPRWQKSDDATEVSEADSPGDSLRDVHDISLNLKLSLDSEK 730
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
S N + LE+AV S+GV + RK+ S + ++ TG K+P+LR
Sbjct: 731 SSTKEN-----------SVRRNLEDAVQKLSRGVSAN-RKTESVENMEATTG-NKWPSLR 777
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHI VI++D L++ K I A ER GS+GF+LSTS ISE+HS L SG +
Sbjct: 778 RRKHIVVIAIDSVQDANLVEIIKNIFVASSNERLSGSVGFVLSTSRAISEVHSLLTSGGI 837
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDG------PFVVDFYYHSHIEYRWGGEGLRKTLVRW 723
+DFDAFICNSGSDL Y + NSED PF++D YH+ IEYRWGGEGLRKTL+ W
Sbjct: 838 EATDFDAFICNSGSDLCYPSSNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICW 897
Query: 724 ASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYC 783
A++ K+E G+ VL E+ S+ YC +F V+ PPVKELRK +RIQALRCHV+Y
Sbjct: 898 AAE----KSEGGQVVLVEDEECSSTYCISFRVKNAEAVPPVKELRKTMRIQALRCHVLYS 953
Query: 784 QNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843
+GS++NVIPVLASRSQALRYLY+RWGVELS M V VGESGDTDYEGLLGGVHKT+ILKG
Sbjct: 954 HDGSKLNVIPVLASRSQALRYLYIRWGVELSNMTVVVGESGDTDYEGLLGGVHKTIILKG 1013
Query: 844 ICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
++ NQ+HA RSY L DV+ D P I E +++S+L+Q G+LK
Sbjct: 1014 SFNAVPNQVHAARSYSLQDVISFDKPGITSI-EGYGPDNLKSALQQFGILK 1063
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q9FY54|SPSA2_ARATH Probable sucrose-phosphate synthase 2 OS=Arabidopsis thaliana GN=SPS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1283 bits (3320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/906 (70%), Positives = 742/906 (81%), Gaps = 40/906 (4%)
Query: 2 IFNNYFA-----------CSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR 50
+F N+FA S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR
Sbjct: 162 VFENWFAQHKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR 221
Query: 51 VDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKEL 110
VDLLTRQV+APDVD SY EP+EML P ++D + GESSGAYIIRIPFGPKDKY+ KEL
Sbjct: 222 VDLLTRQVTAPDVDSSYSEPSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKEL 280
Query: 111 LWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM 170
LWPHIPEFVD AL+HI+++S VLGEQIGGG+ VWPV+IHGHYADAGDS ALLSGALNVPM
Sbjct: 281 LWPHIPEFVDRALSHIMQISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPM 340
Query: 171 LFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 230
+FTGHSLGRDKLEQLLKQ R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQ
Sbjct: 341 VFTGHSLGRDKLEQLLKQGR-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQ 399
Query: 231 WRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNE 290
WRLYDGFDPVLERKLRAR+KR VSC G+FMPRM +IPPGMEFHHIVP D D DG+ E
Sbjct: 400 WRLYDGFDPVLERKLRARMKRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADGDDE--- 456
Query: 291 DNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLI 350
NP + DPPIWSEIMRFF+NPRKP+ILALARPDPKKN+ TLVKAFGECRPLRELANLTLI
Sbjct: 457 -NPQTADPPIWSEIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLI 515
Query: 351 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410
MGNR+ IDE+SST++SVLLS+LKLIDKYDLYGQVA PKHH+QSDVPEIYRLAAKTKGVFI
Sbjct: 516 MGNRNDIDELSSTNSSVLLSILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFI 575
Query: 411 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 470
NPAFIEPFGLTLIEA AHGLP VAT NGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLV+
Sbjct: 576 NPAFIEPFGLTLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVS 635
Query: 471 DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDS 530
D+QLW RCRQNGL NIHLFSWPEHCKTYL+RIA CK RHP+WQR + E S+SDSP DS
Sbjct: 636 DRQLWGRCRQNGLNNIHLFSWPEHCKTYLARIASCKQRHPKWQRVE--FENSDSDSPSDS 693
Query: 531 LRDIQDISLNLKFSLDGEKSGA-SGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRK 589
LRDI DISLNLK SLDGEKSG+ +G D +LD+E A+RK+ +E AV ++ K
Sbjct: 694 LRDINDISLNLKLSLDGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQ-------K 746
Query: 590 SGSTDKVDQNTGAAKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGF 649
S T+K D +K P L+RRK+IFVISVDC +T+ LL K + +A + S GF
Sbjct: 747 SKPTEKFD-----SKMPTLKRRKNIFVISVDCSATSDLLAVVKTVIDAAGR---GSSTGF 798
Query: 650 ILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDG---PFVVDFYYHSH 706
ILSTSMTISE H+ L+SG L P DFDA IC+SGS+LY+++ SED P+ +D YHSH
Sbjct: 799 ILSTSMTISETHTALLSGGLKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSH 858
Query: 707 IEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKE 766
IE+RWGGE LRKTL+RW S V +KK ++L E STNYC +F V+ P + PP+KE
Sbjct: 859 IEFRWGGESLRKTLIRWISSVEEKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKE 918
Query: 767 LRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 826
LRK++R QALRC+ +YCQNG+R+NVIPVLASRSQALRYL +RWG++LS MVVFVG+SGDT
Sbjct: 919 LRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDT 978
Query: 827 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSS 886
DYEGLLGG+HKTVILKG+ S Q NRSYP+ DV P++SPNI + E C I+ +
Sbjct: 979 DYEGLLGGIHKTVILKGLASDLREQ-PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVA 1036
Query: 887 LEQLGL 892
LE+LG+
Sbjct: 1037 LEKLGI 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04933|SPSA2_CRAPL Probable sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/908 (58%), Positives = 674/908 (74%), Gaps = 38/908 (4%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGL+RGENMELGRDSDTGGQ+KYVVE+ARAL MPGVYRVDL TRQ+S+P+VDWSY E
Sbjct: 180 SLHGLVRGENMELGRDSDTGGQIKYVVEVARALAKMPGVYRVDLFTRQISSPEVDWSYAE 239
Query: 70 PTEMLTPRNSD----------DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFV 119
PTEML+ ++ + +D+GE SGAYIIRIPFGP+DKY+ KELLWPHI EFV
Sbjct: 240 PTEMLSSSSTTAGEAHEPEEEEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQEFV 299
Query: 120 DGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGR 179
DGAL+HI+ MS LG+QIGGG+PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGR
Sbjct: 300 DGALSHIVNMSKALGDQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR 359
Query: 180 DKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239
+KLEQLLKQ R ++++IN+ Y+IMRRIEAEELSLDA+E+VITST+QEIEEQW LYDGFD
Sbjct: 360 NKLEQLLKQGRQTKEDINSMYRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDGFDV 419
Query: 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIV-PQDG---DMDGETEGNEDNPAS 295
LER LRAR +R V+C+G+FMPRMA+IPPGM+F ++V P+DG D D T +P S
Sbjct: 420 KLERVLRARARRGVNCHGRFMPRMAVIPPGMDFSNVVVPEDGSEGDGDLATLTEATSPRS 479
Query: 296 PDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD 355
P IW+++MRF TNP KP+ILAL+RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD
Sbjct: 480 V-PAIWADVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD 538
Query: 356 GIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI 415
IDEMS +ASVL +VLKLID+YDLYGQVA+PKHHKQSDVPEIYRLA+KTKGVFINPAFI
Sbjct: 539 DIDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFINPAFI 598
Query: 416 EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 475
EPFGLTLIEAAAHGLP+VATKNGGPVDIHR L+NGLLVDPHDQ ++A+ALLKLV++K LW
Sbjct: 599 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALLKLVSEKNLW 658
Query: 476 ARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQ 535
CR+NGLKNIHLFSWPEHC+TYL+R+A C+ RHPQW+ + ET+ DS DSL+D+
Sbjct: 659 NECRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWKTDTPLDETAIDDSLNDSLKDVL 718
Query: 536 DISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDK 595
D+SL L S+DGEK + S++ G A + L + V + VL ++ S
Sbjct: 719 DMSLRL--SVDGEKMSVN-ESSSVELPGGEA---AELPDQV----RRVLNKIKRQDSGPA 768
Query: 596 VDQNTGAA-----KFPALRRRKHIFVISVDCDSTTG-----LLDATKKICEAVEKERTEG 645
+ G A K+P LRRR+ +FVI++DC G ++ + ++I AV +
Sbjct: 769 QREAEGKAGDVPGKYPMLRRRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMS 828
Query: 646 SI-GFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY-STLNSEDGPFVVDFYY 703
GF LST+M ++E+ FL +G + +DFDA IC+SGS++YY T E G +D Y
Sbjct: 829 RFSGFALSTAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKLYLDPDY 888
Query: 704 HSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPP 763
SHIEYRWGG+GL+KT+ + + D K+ + + S ++C +++++ P
Sbjct: 889 TSHIEYRWGGDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKK 948
Query: 764 VKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES 823
V ++R+ LR++ LRCH++YC+N + + V+P+LASRSQALRYL++RW + ++ M V +GE+
Sbjct: 949 VDDMRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGET 1008
Query: 824 GDTDYEGLLGGVHKTVILKGICSSSSNQ-IHANRSYPLSDVMPIDSPNIVQTPEDCTTSD 882
GDTDYE L+ G HKT+I++G+ S + + SY DV+P D+P I +
Sbjct: 1009 GDTDYEELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADKGAKAEH 1068
Query: 883 IRSSLEQL 890
I + QL
Sbjct: 1069 IVETFRQL 1076
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 895 | ||||||
| 3915023 | 1057 | RecName: Full=Probable sucrose-phosphate | 0.989 | 0.838 | 0.995 | 0.0 | |
| 425875179 | 1056 | sucrose phosphate synthase [Mangifera in | 0.987 | 0.837 | 0.883 | 0.0 | |
| 425875169 | 1056 | sucrose phosphate synthase [Mangifera in | 0.987 | 0.837 | 0.882 | 0.0 | |
| 425875183 | 1056 | sucrose phosphate synthase [Mangifera in | 0.987 | 0.837 | 0.881 | 0.0 | |
| 402534430 | 1056 | sucrose phosphate synthase [Mangifera in | 0.987 | 0.837 | 0.881 | 0.0 | |
| 255582303 | 998 | sucrose phosphate syntase, putative [Ric | 0.987 | 0.885 | 0.851 | 0.0 | |
| 224120346 | 1049 | predicted protein [Populus trichocarpa] | 0.985 | 0.840 | 0.854 | 0.0 | |
| 399138448 | 1045 | sucrose phosphate synthase [Litchi chine | 0.972 | 0.832 | 0.859 | 0.0 | |
| 385282640 | 1057 | sucrose phosphate synthase 1f [Prunus pe | 0.988 | 0.837 | 0.846 | 0.0 | |
| 157313316 | 1057 | sucrose phosphate synthase protein 1 [Pr | 0.988 | 0.837 | 0.845 | 0.0 |
| >gi|3915023|sp|O22060.1|SPS1_CITUN RecName: Full=Probable sucrose-phosphate synthase 1; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase 1 gi|2588888|dbj|BAA23213.1| sucrose-phosphate synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1827 bits (4733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 882/886 (99%), Positives = 884/886 (99%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM
Sbjct: 232 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA
Sbjct: 292 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI
Sbjct: 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT
Sbjct: 412 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL
Sbjct: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLLVDPHDQQS+ADALLKLVA KQLWARCRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIAGCKPRHPQWQR DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK
Sbjct: 652 SWPEHCKTYLSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR
Sbjct: 712 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 771
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL
Sbjct: 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD
Sbjct: 832 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 891
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR+
Sbjct: 892 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRV 951
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS
Sbjct: 952 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 1011
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 895
NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV
Sbjct: 1012 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875179|dbj|BAM68535.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1655 bits (4287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 782/885 (88%), Positives = 845/885 (95%), Gaps = 1/885 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP NS+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHIIRM
Sbjct: 232 PTEMLTPVNSEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIRM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+GGG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 292 SNVLGEQVGGGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI
Sbjct: 352 RLSRDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+ MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFT
Sbjct: 412 RRNVSCYGRIMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLL
Sbjct: 472 NPRKPMILALARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK
Sbjct: 652 SWPEHCKTYLSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
GASGND+SL+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALR
Sbjct: 712 GGASGNDNSLESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALR 770
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVIS+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG
Sbjct: 771 RRKHIFVISLDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGF 830
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
P+DFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + V D
Sbjct: 831 RPNDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSVND 890
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAE+ +KV+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RI
Sbjct: 891 KKAENEDKVVTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARI 950
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+S
Sbjct: 951 NVIPVLASRSQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSAS 1010
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
NQ+HANRSYPL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1011 NQVHANRSYPLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875169|dbj|BAM68530.1| sucrose phosphate synthase [Mangifera indica] gi|425875171|dbj|BAM68531.1| sucrose phosphate synthase [Mangifera indica] gi|425875173|dbj|BAM68532.1| sucrose phosphate synthase [Mangifera indica] gi|425875181|dbj|BAM68536.1| sucrose phosphate synthase [Mangifera indica] gi|425875185|dbj|BAM68538.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1654 bits (4283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/885 (88%), Positives = 845/885 (95%), Gaps = 1/885 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP NS+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHII+M
Sbjct: 232 PTEMLTPVNSEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIQM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+GGG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 292 SNVLGEQVGGGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI
Sbjct: 352 RLSRDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+ MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFT
Sbjct: 412 RRNVSCYGRIMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLL
Sbjct: 472 NPRKPMILALARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK
Sbjct: 652 SWPEHCKTYLSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
GASGND+SL+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALR
Sbjct: 712 GGASGNDNSLESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALR 770
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVIS+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG
Sbjct: 771 RRKHIFVISLDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGF 830
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
P+DFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + V D
Sbjct: 831 RPNDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSVND 890
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAE+ +KV+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RI
Sbjct: 891 KKAENEDKVVTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARI 950
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+S
Sbjct: 951 NVIPVLASRSQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSTS 1010
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
NQ+HANRSYPL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1011 NQVHANRSYPLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875183|dbj|BAM68537.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1652 bits (4278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/885 (88%), Positives = 844/885 (95%), Gaps = 1/885 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP NS+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHII+M
Sbjct: 232 PTEMLTPVNSEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIQM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+GGG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 292 SNVLGEQVGGGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI
Sbjct: 352 RLSRDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+ MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFT
Sbjct: 412 RRNVSCYGRIMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLL
Sbjct: 472 NPRKPMILALARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK
Sbjct: 652 SWPEHCKTYLSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
GASGND+SL+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALR
Sbjct: 712 GGASGNDNSLESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALR 770
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVIS+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG
Sbjct: 771 RRKHIFVISLDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGF 830
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
P+DFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + D
Sbjct: 831 RPNDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSAND 890
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAE+ +KV+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RI
Sbjct: 891 KKAENEDKVVTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARI 950
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+S
Sbjct: 951 NVIPVLASRSQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSAS 1010
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
NQ+HANRSYPL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1011 NQVHANRSYPLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|402534430|dbj|BAM37540.1| sucrose phosphate synthase [Mangifera indica] gi|425875175|dbj|BAM68533.1| sucrose phosphate synthase [Mangifera indica] gi|425875177|dbj|BAM68534.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1652 bits (4278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/885 (88%), Positives = 844/885 (95%), Gaps = 1/885 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE
Sbjct: 172 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP NS+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHIIRM
Sbjct: 232 PTEMLTPVNSEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIRM 291
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+GGG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 292 SNVLGEQVGGGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 351
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI
Sbjct: 352 RLSRDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARI 411
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+ MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFT
Sbjct: 412 RRNVSCYGRIMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFT 471
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLL
Sbjct: 472 NPRKPMILALARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLL 531
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLF 651
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK
Sbjct: 652 SWPEHCKTYLSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEK 711
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
GASGND+SL+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALR
Sbjct: 712 GGASGNDNSLESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALR 770
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKHIFVIS+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG
Sbjct: 771 RRKHIFVISLDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGF 830
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
P+DFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + D
Sbjct: 831 RPNDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSAND 890
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKAE+ +KV+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RI
Sbjct: 891 KKAENEDKVVTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARI 950
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+S
Sbjct: 951 NVIPVLASRSQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSAS 1010
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
NQ+HANRSYPL+DV+P DSP+I+QT ED +S++RS LE+L +LK
Sbjct: 1011 NQVHANRSYPLTDVIPFDSPSIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582303|ref|XP_002531942.1| sucrose phosphate syntase, putative [Ricinus communis] gi|223528388|gb|EEF30424.1| sucrose phosphate syntase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1602 bits (4148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/884 (85%), Positives = 831/884 (94%)
Query: 11 IHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP 70
+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGEP
Sbjct: 114 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEP 173
Query: 71 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMS 130
TEMLT RN ++F D+MGESSGAYI+RIPFGP+DKY+ KELLWPHIPEFVDGALNHII+MS
Sbjct: 174 TEMLTLRNLENFEDEMGESSGAYIVRIPFGPRDKYVPKELLWPHIPEFVDGALNHIIQMS 233
Query: 131 NVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQAR 190
VLGEQIGGGKP+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ R
Sbjct: 234 KVLGEQIGGGKPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGR 293
Query: 191 LSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIK 250
LSRDEIN TYKIMRRIEAEE SLD+SEIVITSTRQEI+EQWRLYDGFDP+LERKLRARIK
Sbjct: 294 LSRDEINLTYKIMRRIEAEEFSLDSSEIVITSTRQEIDEQWRLYDGFDPILERKLRARIK 353
Query: 251 RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 310
RNVSCYG+FMPRMAIIPPGMEFHHIVPQ+GDMDGE EGNED+P SPDPPIW+EIMRFFTN
Sbjct: 354 RNVSCYGRFMPRMAIIPPGMEFHHIVPQEGDMDGEIEGNEDHPTSPDPPIWTEIMRFFTN 413
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 370
PRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTL+MGNRDGIDEMSST+ASVLLS
Sbjct: 414 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLVMGNRDGIDEMSSTNASVLLS 473
Query: 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430
VLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL
Sbjct: 474 VLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 533
Query: 431 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 490
PIVATKNGGPVDIHRVLDNGLLVDPHDQQS+ADALLKLVADKQLW +CRQNGLKNIHLFS
Sbjct: 534 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVADKQLWEKCRQNGLKNIHLFS 593
Query: 491 WPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKS 550
WPEHCK+YLSRIA CKPRHP+W++N+DGG+TS++DSPGDSLRDI D+SLNLKFSLDGEK+
Sbjct: 594 WPEHCKSYLSRIASCKPRHPKWEKNNDGGDTSDTDSPGDSLRDIHDLSLNLKFSLDGEKT 653
Query: 551 GASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRR 610
GASG D+SL+ EG+ +D+K+++ENAVLAWSKGV K+T+K GST+K + N + KFPALRR
Sbjct: 654 GASGTDNSLEYEGDGSDKKTKIENAVLAWSKGVSKNTQKMGSTEKGEHNNSSGKFPALRR 713
Query: 611 RKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670
RK IFVI+VD D+ + LL+AT+KI +AVE+ERTEGSIGFILSTS+TISEIHSFLVSG S
Sbjct: 714 RKQIFVIAVDFDNISVLLEATRKIFDAVERERTEGSIGFILSTSLTISEIHSFLVSGGFS 773
Query: 671 PSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDK 730
PSDFDAFICNSGSDLYYS N EDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWA+ V DK
Sbjct: 774 PSDFDAFICNSGSDLYYSNHNPEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAASVNDK 833
Query: 731 KAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRIN 790
K+++ E ++T AEQLSTNYCYAF VQ PG+ PPVKELRK+LRIQALR HVIYCQNG+RIN
Sbjct: 834 KSKNEEHIVTAAEQLSTNYCYAFKVQTPGLVPPVKELRKLLRIQALRSHVIYCQNGTRIN 893
Query: 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 850
VIPVLASRSQALRYLY+RWGVEL+ MV+FVGE GDTDYEGLLGG+HK++ILKG+C ++N
Sbjct: 894 VIPVLASRSQALRYLYVRWGVELANMVIFVGECGDTDYEGLLGGIHKSIILKGVCCGANN 953
Query: 851 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
Q+HANR+YPLSDV+P D+ N+VQT E+CT SDI SLEQLG LK
Sbjct: 954 QLHANRNYPLSDVIPSDNSNVVQTAEECTCSDILGSLEQLGCLK 997
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120346|ref|XP_002331025.1| predicted protein [Populus trichocarpa] gi|222872955|gb|EEF10086.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1601 bits (4145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/889 (85%), Positives = 828/889 (93%), Gaps = 7/889 (0%)
Query: 6 YFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 65
Y HGL ENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDL TRQVSAPDVDW
Sbjct: 167 YIVLIRHGLNFRENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLFTRQVSAPDVDW 226
Query: 66 SYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNH 125
SYGEPTEMLT RNS+DF+D+MGESSGAYI+RIPFGPKDKY+ KELLWPHIPEFVDGAL H
Sbjct: 227 SYGEPTEMLTLRNSEDFLDEMGESSGAYIVRIPFGPKDKYVPKELLWPHIPEFVDGALCH 286
Query: 126 IIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185
II+MS LGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL
Sbjct: 287 IIQMSKSLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 346
Query: 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245
LKQ RLSRDEIN+TYKIMRRIEAEELSLD+SEIVITSTRQEIE+QWRLYDGFDP+LERKL
Sbjct: 347 LKQGRLSRDEINSTYKIMRRIEAEELSLDSSEIVITSTRQEIEQQWRLYDGFDPILERKL 406
Query: 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIM 305
RARIKRNVSCYGKFMPRMAIIPPGMEFHHI+PQDGDMDGE EGNED+P SPDPPIW+EIM
Sbjct: 407 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIIPQDGDMDGEIEGNEDHPTSPDPPIWAEIM 466
Query: 306 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSA 365
RFFTNPRKP+ILALARPDPKKNITTLV+AFGECR LRELANLTLIMGNRDGIDEMSST+A
Sbjct: 467 RFFTNPRKPMILALARPDPKKNITTLVEAFGECRQLRELANLTLIMGNRDGIDEMSSTNA 526
Query: 366 SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425
SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEA
Sbjct: 527 SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 586
Query: 426 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKN 485
AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS+A ALLKLVA+K LWA+CRQNGLKN
Sbjct: 587 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIAGALLKLVAEKHLWAKCRQNGLKN 646
Query: 486 IHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSL 545
IHLFSWPEHCKTYLSRIA CK RHPQWQ++DDG +TS++DSPGDSLRDIQD+SLNLKFSL
Sbjct: 647 IHLFSWPEHCKTYLSRIASCKSRHPQWQKSDDGADTSDTDSPGDSLRDIQDLSLNLKFSL 706
Query: 546 DGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKF 605
DGEK+G SGN++ LDSEGN D+KS++ENAVL+WSKGV+KDTRK+ VDQN+ + KF
Sbjct: 707 DGEKTGGSGNENPLDSEGNATDKKSKIENAVLSWSKGVVKDTRKA-----VDQNSSSGKF 761
Query: 606 PALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLV 665
P+LRRRK IFVI+VD D+ + L +AT+KI EAVEKERTEGSIGFILSTS+TISEI SFL
Sbjct: 762 PSLRRRKQIFVIAVDFDTISSLAEATRKIFEAVEKERTEGSIGFILSTSLTISEIRSFLA 821
Query: 666 SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 725
SG SPSDFDAFICNSGSDLYYST N EDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS
Sbjct: 822 SGGFSPSDFDAFICNSGSDLYYSTPNPEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 881
Query: 726 QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 785
V+DKKAE+ E+++T AEQLST+YCYAF+V+KPG+ PPVKEL+K LRIQALRCH IYCQN
Sbjct: 882 SVSDKKAENEERIVTAAEQLSTDYCYAFTVKKPGLVPPVKELQKALRIQALRCHAIYCQN 941
Query: 786 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 845
G+R+NVIPVLASRSQALRYLY+RWGVEL+ MVVF GE GDTDYEGLL G+HK+V+LKG+C
Sbjct: 942 GTRLNVIPVLASRSQALRYLYVRWGVELANMVVFAGECGDTDYEGLLCGLHKSVVLKGVC 1001
Query: 846 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
SS+SNQ+HANRSYPL+DVMP +SPNIVQ PE+ +SDIRSSLEQLG LK
Sbjct: 1002 SSASNQLHANRSYPLTDVMPSESPNIVQAPEE--SSDIRSSLEQLGCLK 1048
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138448|gb|AFP23360.1| sucrose phosphate synthase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 1593 bits (4126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 767/892 (85%), Positives = 830/892 (93%), Gaps = 22/892 (2%)
Query: 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPD 62
N + +HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPD
Sbjct: 175 LNFSYLVFLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPD 234
Query: 63 VDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGA 122
VDWSYGEPTEMLTPRNS+D MD+MGESSGAYIIRIPFGPKDKYI KELLWPHIPEFVDGA
Sbjct: 235 VDWSYGEPTEMLTPRNSEDCMDEMGESSGAYIIRIPFGPKDKYIPKELLWPHIPEFVDGA 294
Query: 123 LNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKL 182
NHII+MS+VLGEQ+GGGKPVWP+AIHGHYADAGD+AALLSGALNVPMLFTGHSLGRDKL
Sbjct: 295 FNHIIQMSSVLGEQVGGGKPVWPIAIHGHYADAGDAAALLSGALNVPMLFTGHSLGRDKL 354
Query: 183 EQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242
EQLLKQ RLSRDEIN TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP+LE
Sbjct: 355 EQLLKQGRLSRDEINKTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPILE 414
Query: 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302
RKLRARI+RNVSCYG+FMPRMAIIPPGMEFHHIVP DGDMDGETEGNED+P+SPDP IWS
Sbjct: 415 RKLRARIRRNVSCYGRFMPRMAIIPPGMEFHHIVPVDGDMDGETEGNEDHPSSPDPHIWS 474
Query: 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS 362
EIMRFFTNPRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS
Sbjct: 475 EIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS 534
Query: 363 TSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 422
T+ASVLLSV+KLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTL
Sbjct: 535 TNASVLLSVIKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 594
Query: 423 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482
IEAAAHGLP+VATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNG
Sbjct: 595 IEAAAHGLPMVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNG 654
Query: 483 LKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLK 542
LKNIHLFSWPEHCK+YL+RIA CKPR+PQW ++DDGGETSESDSPGDSLRDI DISLNLK
Sbjct: 655 LKNIHLFSWPEHCKSYLTRIASCKPRYPQWLKDDDGGETSESDSPGDSLRDIHDISLNLK 714
Query: 543 FSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGA 602
FSLDGEK+G+SGND+SL+SEGNV++R+S++ENAVLA A
Sbjct: 715 FSLDGEKNGSSGNDNSLESEGNVSERRSKIENAVLA----------------------CA 752
Query: 603 AKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHS 662
KFPA+RRRKHIFVISVD D+T GLL+A +KI EAV KE+TEGSIGFILSTS+TISE+HS
Sbjct: 753 GKFPAVRRRKHIFVISVDYDTTAGLLEAIRKIFEAVGKEKTEGSIGFILSTSLTISEMHS 812
Query: 663 FLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR 722
FLV G SPSDFDAFICNSGSDLYYSTLN EDGPFV+DFYYHSHIEYRWGGEGLRKTL+R
Sbjct: 813 FLVLGGFSPSDFDAFICNSGSDLYYSTLNPEDGPFVLDFYYHSHIEYRWGGEGLRKTLIR 872
Query: 723 WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIY 782
W + V DKKAE+ EK++T AEQLSTNYCYAF+VQKPGM P+KELRK+LRIQALRCHVIY
Sbjct: 873 WVASVADKKAENEEKIVTAAEQLSTNYCYAFTVQKPGMVTPIKELRKLLRIQALRCHVIY 932
Query: 783 CQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842
CQNG+RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE GDTDYE LLGG+HK++ILK
Sbjct: 933 CQNGTRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGECGDTDYEALLGGLHKSIILK 992
Query: 843 GICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
G CSS+SNQ+HANRSYPLSDVMP DSPNIV+TPED T+SD+R+SLE LG+LK
Sbjct: 993 GACSSASNQVHANRSYPLSDVMPCDSPNIVETPEDFTSSDVRNSLESLGILK 1044
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|385282640|gb|AFI57907.1| sucrose phosphate synthase 1f [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1593 bits (4125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/886 (84%), Positives = 823/886 (92%), Gaps = 1/886 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDWSYGE
Sbjct: 173 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGE 232
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP N+D F ++MGESSG+YIIRIPFGPKDKYI KE LWPHIPEFVDGALNHII+M
Sbjct: 233 PTEMLTPINADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQM 292
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 293 SKVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 352
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI
Sbjct: 353 RLSRDEINTTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARI 412
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+FMPRM IIPPGMEFHHIVPQDGDMDGETE NED+P +PDPPIWSEIMRFFT
Sbjct: 413 RRNVSCYGRFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFT 472
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS TS+SVLL
Sbjct: 473 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLL 532
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDK+DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 533 SVLKLIDKHDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 592
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIH+VLDNGLLVDPHDQQS+ADALLKLVADKQLWARCRQNGLKNIHLF
Sbjct: 593 LPIVATKNGGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLF 652
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPRHPQWQR++DG ETSESDSP DSLRDIQD+SLNLKFSLDGEK
Sbjct: 653 SWPEHCKTYLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEK 712
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SG S ND S + EGN ADR++++ENAVLAWSKG+ +DTRK+G ++K D N+ A KFP LR
Sbjct: 713 SGTSVNDSSSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNS-AGKFPVLR 771
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKH+ VI+VDCD+ T L++ T+KI EA KER+EGS+GFILSTS+TISEI SFLVSG L
Sbjct: 772 RRKHLIVIAVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGL 831
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
SP+DFDAFICNSGSDLYY +++SE+ PFVVDFYYHSHIEYRWGGEGLRKTLVRWA V D
Sbjct: 832 SPNDFDAFICNSGSDLYYPSIHSEERPFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVND 891
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KK S E+++T A+QLST+YCYAF VQKPG PPVKELRK+LRIQALRCHVIYCQNG+R+
Sbjct: 892 KKTGSVEQIVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRV 951
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLYLRWGV+LSK+VV GE GDTDYEGLLGG+HK+V+LKG+ S++
Sbjct: 952 NVIPVLASRSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAI 1011
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 895
+Q+H NR+YPLSDV+ +DSPNIVQT E C + DIR SLE+LG++K
Sbjct: 1012 SQLHTNRNYPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVKT 1057
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157313316|gb|ABV32551.1| sucrose phosphate synthase protein 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1592 bits (4122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 749/886 (84%), Positives = 823/886 (92%), Gaps = 1/886 (0%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDWSYGE
Sbjct: 173 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGE 232
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTP N+D F ++MGESSG+YIIRIPFGPKDKYI KE LWPHIPEFVDGALNHII+M
Sbjct: 233 PTEMLTPINADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQM 292
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 293 SKVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQG 352
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLSRDEIN TYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI
Sbjct: 353 RLSRDEINTTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARI 412
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+RNVSCYG+FMPRM IIPPGMEFHHIVPQDGDMDGETE NED+P +PDPPIWSEIMRFFT
Sbjct: 413 RRNVSCYGRFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFT 472
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPK+NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS TS+SVLL
Sbjct: 473 NPRKPMILALARPDPKRNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLL 532
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDK+DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 533 SVLKLIDKHDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 592
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LPIVATKNGGPVDIH+VLDNGLLVDPHDQQS+ADALLKLVADKQLWARCRQNGLKNIHLF
Sbjct: 593 LPIVATKNGGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLF 652
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRIA CKPRHPQWQR++DG ETSESDSP DSLRDIQD+SLNLKFSLDGEK
Sbjct: 653 SWPEHCKTYLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEK 712
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SG S ND S + EGN ADR++++ENAVLAWSKG+ +DTRK+G ++K D N+ A KFP LR
Sbjct: 713 SGTSVNDSSSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNS-AGKFPVLR 771
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRKH+ VI+VDCD+ T L++ T+KI EA KER+EGS+GFILSTS+TISEI SFLVSG L
Sbjct: 772 RRKHLIVIAVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGL 831
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
SP+DFDAFICNSGSDLYY +++SE+ PFVVDFYYHSHIEYRWGGEGLRKTLVRWA V D
Sbjct: 832 SPNDFDAFICNSGSDLYYPSIHSEERPFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVND 891
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KK S E+++T A+QLST+YCYAF VQKPG PPVKELRK+LRIQALRCHVIYCQNG+R+
Sbjct: 892 KKTGSVEQIVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRV 951
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASRSQALRYLYLRWGV+LSK+VV GE GDTDYEGLLGG+HK+V+LKG+ S++
Sbjct: 952 NVIPVLASRSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAI 1011
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 895
+Q+H NR+YPLSDV+ +DSPNIVQT E C + DIR SLE+LG++K
Sbjct: 1012 SQLHTNRNYPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVKT 1057
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 895 | ||||||
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.970 | 0.833 | 0.754 | 0.0 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.958 | 0.819 | 0.693 | 0.0 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.965 | 0.813 | 0.563 | 2e-262 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.631 | 0.538 | 0.623 | 1.5e-247 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.535 | 0.593 | 0.266 | 3.2e-30 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.530 | 0.587 | 0.264 | 2.3e-27 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.530 | 0.504 | 0.260 | 6.6e-27 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.543 | 0.581 | 0.25 | 6.4e-26 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.529 | 0.586 | 0.250 | 2.1e-25 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.526 | 0.577 | 0.247 | 9.1e-24 |
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3565 (1260.0 bits), Expect = 0., P = 0.
Identities = 668/885 (75%), Positives = 769/885 (86%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD+SYGE
Sbjct: 174 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGE 233
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTPR+S+DF D+MGESSGAYI+RIPFGPKDKYI KELLWPHIPEFVDGA++HI++M
Sbjct: 234 PTEMLTPRDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQM 293
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQA 189
SNVLGEQ+G GKP+WP AIHGHY NVPML TGHSLGRDKLEQLL+Q
Sbjct: 294 SNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQG 353
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
RLS++EIN+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARI
Sbjct: 354 RLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARI 413
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KRNVSCYG+FMPRM IPPGMEF+HIVP GDM+ +T+GNE++P SPDPPIW+EIMRFF+
Sbjct: 414 KRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFS 472
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXXXXXXXX 369
N RKP+ILALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRDGIDEM
Sbjct: 473 NSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLL 532
Query: 370 XXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
IDKYDLYGQVAYPKHHKQSDVP+IYRLAAK+KGVFINPA IEPFGLTLIEAAAHG
Sbjct: 533 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHG 592
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VATKNGGPVDIHRVLDNGLLVDPHDQQS+++ALLKLVADK LWA+CRQNGLKNIH F
Sbjct: 593 LPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQF 652
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYLSRI KPRHPQWQ +DDGG+ SE +SP DSLRDIQDISLNLKFS DG
Sbjct: 653 SWPEHCKTYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDG-- 709
Query: 550 SGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609
SGND+ ++ EG+ DRKS++E AV WSKG KD+RK GS ++ + N+G KFPA+R
Sbjct: 710 ---SGNDNYMNQEGSSMDRKSKIEAAVQNWSKG--KDSRKMGSLERSEVNSG--KFPAVR 762
Query: 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669
RRK I VI++D D L+ATK+I +AVEKER EGS+GFILSTS+TISE+ SFLVSG L
Sbjct: 763 RRKFIVVIALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGL 822
Query: 670 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 729
+P+DFDAFICNSGSDL+Y++LN+EDGPFVVDFYYHSHIEYRWGGEGLRKTL+RWAS + +
Sbjct: 823 NPNDFDAFICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNE 882
Query: 730 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 789
KKA++ E+++T AE LST+YCY F+V+KP PPV+ELRK+LRIQALRCHV+Y QNG+RI
Sbjct: 883 KKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRI 942
Query: 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849
NVIPVLASR QALRYL++RWG++++KM VFVGESGDTDYEGLLGG+HK+V+LKG+ S+
Sbjct: 943 NVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSAC 1002
Query: 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 894
+HANRSYPL+DV+ +S N+V D SD+R +L++L LLK
Sbjct: 1003 --LHANRSYPLTDVISFESNNVVHASPD---SDVRDALKKLELLK 1042
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3166 (1119.5 bits), Expect = 0., P = 0.
Identities = 615/887 (69%), Positives = 709/887 (79%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVD SY E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
P+EML P ++D + GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL+HI+++
Sbjct: 241 PSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQI 299
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIGGG+ VWPV+IHGHY NVPM+FTGHSLGRDKLEQLLKQ
Sbjct: 300 SKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQG 359
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQWRLYDGFDPVLERKLRAR+
Sbjct: 360 R-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRARM 418
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
KR VSC G+FMPRM +IPPGMEFHHIVP D D DG+ E NP + DPPIWSEIMRFF+
Sbjct: 419 KRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADGDDE----NPQTADPPIWSEIMRFFS 474
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXXXXXXXX 369
NPRKP+ILALARPDPKKN+ TLVKAFGECRPLRELANLTLIMGNR+ IDE+
Sbjct: 475 NPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSSTNSSVLL 534
Query: 370 XXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
IDKYDLYGQVA PKHH+QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA AHG
Sbjct: 535 SILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHG 594
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP VAT NGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLV+D+QLW RCRQNGL NIHLF
Sbjct: 595 LPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLF 654
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 549
SWPEHCKTYL+RIA CK RHP+WQR + E S+SDSP DSLRDI DISLNLK SLDGEK
Sbjct: 655 SWPEHCKTYLARIASCKQRHPKWQRVEF--ENSDSDSPSDSLRDINDISLNLKLSLDGEK 712
Query: 550 SGAS-GNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608
SG++ G D +LD+E A+RK+ +E AV ++ KS T+K D +K P L
Sbjct: 713 SGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQ-------KSKPTEKFD-----SKMPTL 760
Query: 609 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 668
+RRK+IFVISVDC +T+ LL K + +A + S GFILSTSMTISE H+ L+SG
Sbjct: 761 KRRKNIFVISVDCSATSDLLAVVKTVIDAAGRG---SSTGFILSTSMTISETHTALLSGG 817
Query: 669 LSPSDFDAFICNSGSDLYYSTLNSEDG---PFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 725
L P DFDA IC+SGS+LY+++ SED P+ +D YHSHIE+RWGGE LRKTL+RW S
Sbjct: 818 LKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWIS 877
Query: 726 QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 785
V +KK ++L E STNYC +F V+ P + PP+KELRK++R QALRC+ +YCQN
Sbjct: 878 SVEEKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQN 937
Query: 786 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 845
G+R+NVIPVLASRSQALRYL +RWG++LS MVVFVG+SGDTDYEGLLGG+HKTVILKG+
Sbjct: 938 GARLNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKGLA 997
Query: 846 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892
S Q NRSYP+ DV P++SPNI + E C I+ +LE+LG+
Sbjct: 998 SDLREQ-PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVALEKLGI 1042
|
|
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2525 (893.9 bits), Expect = 2.0e-262, P = 2.0e-262
Identities = 507/899 (56%), Positives = 634/899 (70%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGL+RGENMELG DSDTGGQVKYVVELARAL MPGVYRVDL TRQ+ + +VDWSY E
Sbjct: 176 SLHGLVRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAE 235
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLT D D+ GESSGAYIIRIPFGP+DKY+ KE+LWP + EFVDGAL HI+ M
Sbjct: 236 PTEMLTTAEDCDG-DETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNM 294
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIG GKPVWP IHGHY NVPM+ TGHSLGR+KLEQLLKQ
Sbjct: 295 SKVLGEQIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 354
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
R S+++IN+TYKI RRIEAEELSLDA+E+VITSTRQEI+EQW LYDGFD LE+ LRAR
Sbjct: 355 RQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARA 414
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHI-----VPQ-DGDMDGETEGNEDNPASPDPPIWSE 303
+R V+C+G+FMPRMA+IPPGM+F ++ P+ DGD+ G E + P IWSE
Sbjct: 415 RRGVNCHGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSE 474
Query: 304 IMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXX 363
+MRFFTNP KP+ILAL+RPDPKKNITTL+KAFGECRPLRELANLTLIMGNRD IDE+
Sbjct: 475 VMRFFTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSG 534
Query: 364 XXXXXXXXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI 423
IDKYDLYG VAYPKHHKQSDVP+IYRLAA TKGVFINPA +EPFGLTLI
Sbjct: 535 NASVLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLI 594
Query: 424 EAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483
EAAAHGLP+VATKNGGPVDIHR L NGLLVDPHDQ+++A+ALLKLV++K LW CR NG
Sbjct: 595 EAAAHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGW 654
Query: 484 KNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESD-SPGDSLRDIQDISLNLK 542
KNIHLFSWPEHC+TYL+RIA C+ RHPQWQ + D + + S DSL+D+QD+SL L
Sbjct: 655 KNIHLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDEFSLNDSLKDVQDMSLRL- 713
Query: 543 FSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGA 602
S+DG+K +G+ + +S V SR+ + SK L+ ++S N G+
Sbjct: 714 -SMDGDKPSLNGSLEP-NSADPVKQIMSRMRTPEIK-SKPELQGKKQS-------DNLGS 763
Query: 603 AKFPALRRRKHIFVISVDCDSTTGLLDAT------KKICEAVEKE-RTEGSIGFILSTSM 655
K+P LRRR+ + V++VDC G D + I +AV + + + GF +STSM
Sbjct: 764 -KYPVLRRRERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSM 822
Query: 656 TISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEG 715
+ E+ FL S + S+FD IC+SGS++YY E+G + D Y SHI+YRWG EG
Sbjct: 823 PLDELTRFLKSAKIQVSEFDTLICSSGSEVYYP--GGEEGKLLPDPDYSSHIDYRWGMEG 880
Query: 716 LRKTLVRW--ASQVTDKKAESGEKVLTPAEQLSTN-YCYAFSVQKPGMTPPVKELRKVLR 772
L+ T+ + + V + G L +Q S+N +C A+ ++ V +LR+ LR
Sbjct: 881 LKNTVWKLMNTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLR 940
Query: 773 IQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 832
++ LRCH +YC+N +R+ ++P+LASRSQALRYL++RW + ++ M V VG+ GDTDYE L+
Sbjct: 941 LRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELI 1000
Query: 833 GGVHKTVILKGICSSSSNQIHANRSYPL-SDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890
G HKTVI+KG+ + S+ + RS L D++P +SP I D +I +QL
Sbjct: 1001 SGTHKTVIVKGLVTLGSDALL--RSTDLRDDIVPSESPFIGFLKVDSPVKEITDIFKQL 1057
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1869 (663.0 bits), Expect = 1.5e-247, Sum P(2) = 1.5e-247
Identities = 366/587 (62%), Positives = 446/587 (75%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGL+RGENMELGRDSDTGGQVKYVVELARAL + GV+RVDLLTRQ+S+P+VD+SYGE
Sbjct: 201 SMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVHRVDLLTRQISSPEVDYSYGE 260
Query: 70 PTEMLT--PRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHII 127
P EML+ P SD S G+YIIRIP G +DKYI KE LWPHIPEFVDGALNHI+
Sbjct: 261 PVEMLSCPPEGSD--------SCGSYIIRIPCGSRDKYIPKESLWPHIPEFVDGALNHIV 312
Query: 128 RMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLK 187
++ LGEQ+ GGKP+WP IHGHY NVPM+ TGHSLGR+K EQLL+
Sbjct: 313 SIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGHSLGRNKFEQLLQ 372
Query: 188 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRA 247
Q R++R++I+ TYKIMRRIEAEE SLDA+E+V+TSTRQEI+ QW LYDGFD LERKLR
Sbjct: 373 QGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYDGFDIKLERKLRV 432
Query: 248 RIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDG-DMDGETE---GNEDNPAS-PDPPIWS 302
R +R VSC G++MPRM +IPPGM+F +++ QD + DG+ + G + N P PPIWS
Sbjct: 433 RRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDRNQIKKPVPPIWS 492
Query: 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXX 362
EIMRFF+NP KP ILAL+RPD KKN+TTLVKAFGEC+PLRELANL LI+GNRD I+EM
Sbjct: 493 EIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLILGNRDDIEEMPN 552
Query: 363 XXXXXXXXXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 422
ID+YDLYGQVAYPKHHKQS+VP+IYRLAAKTKGVFINPA +EPFGLTL
Sbjct: 553 SSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFINPALVEPFGLTL 612
Query: 423 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482
IEAAA+GLPIVAT+NGGPVDI + L+NGLLVDPHDQQ+++DALLKLVA+K LWA CR+NG
Sbjct: 613 IEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLVANKHLWAECRKNG 672
Query: 483 LKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLK 542
LKNIH FSWPEHC+ YLS + C+ RHP + D + E + DSLRD+ DISL +
Sbjct: 673 LKNIHRFSWPEHCRNYLSHVEHCRNRHPT--SSLDIMKVPE-ELTSDSLRDVDDISL--R 727
Query: 543 FSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRK 589
FS +G+ + +G D+ + + D S++ N++ S + R+
Sbjct: 728 FSTEGDFT-LNGELDAGTRQKKLVDAISQM-NSMKGCSAAIYSPGRR 772
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 138/517 (26%), Positives = 231/517 (44%)
Query: 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSA 60
M+FN S HG N+ LG DTGGQV Y+++ RAL + + R+ +V
Sbjct: 274 MVFN-VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIQKQGLEVIP 329
Query: 61 PDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIP 116
+ + P T N ++ + + A+I+RIPF G K+I++ +WP++
Sbjct: 330 KILIVTRLLPEAKGTTCNQR--LERVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLE 387
Query: 117 EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHS 176
F + A SN + ++ G P I G+Y V H+
Sbjct: 388 TFAEDA-------SNEISAELQGV----PNLIIGNYSDGNLVASLLASKLGVIQCNIAHA 436
Query: 177 LGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDG 236
L + K + R D+ Y + A+ ++++ ++ +ITST QEI
Sbjct: 437 LEKTKYPESDIYWRNHEDK----YHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQ 492
Query: 237 FDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVP-QDGD--MDGETEGNEDNP 293
++ + + R V F P+ I+ PG + P D + + E E+
Sbjct: 493 YESHTAFTMPG-LYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEELL 551
Query: 294 ASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN 353
S + E + ++ KP+I ++AR D KN+T LV+ + + LRELANL ++ G
Sbjct: 552 FSAEQN--DEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGY 609
Query: 354 RDGIDEMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINP 412
D I++YDL+G+ + ++ E+YR A TKGVF+ P
Sbjct: 610 IDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQP 669
Query: 413 AFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV--- 469
AF E FGLT++E+ LP AT +GGP +I +G +DP+ VA L+
Sbjct: 670 AFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETC 729
Query: 470 -ADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAG 504
+ W + + GLK I+ ++W ++ + L+ +AG
Sbjct: 730 NTNPNHWVKISEGGLKRIYERYTWKKYSERLLT-LAG 765
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 341 (125.1 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 138/521 (26%), Positives = 225/521 (43%)
Query: 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTR-QVS 59
M+FN S HG N+ LG DTGGQV Y+++ RAL ++L R +
Sbjct: 277 MVFN-VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRAL-------ETEMLLRIKRQ 326
Query: 60 APDVDWSYGEPTEMLTPRNSDDFMDDMGESSGA---YIIRIPF----GPKDKYIAKELLW 112
D+ S T ++ + SG +I+R+PF G K+I++ +W
Sbjct: 327 GLDISPSILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVW 386
Query: 113 PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLF 172
P++ + A + I+ GE G P I G+Y V
Sbjct: 387 PYLENYAQDAASEIV------GELQGV-----PDFIIGNYSDGNLVASLMAHRMGVTQCT 435
Query: 173 TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 232
H+L + K + + + + Y + A+ ++++ ++ +ITST QEI
Sbjct: 436 IAHALEKTKYPD----SDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKN 491
Query: 233 LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGET--EGN- 289
++ L + R V F P+ I+ PG + P + T G+
Sbjct: 492 TVGQYESHGAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEETRRLTALHGSI 550
Query: 290 EDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL 349
E+ SPD E + ++ KP++ ++AR D KNI+ LV+ + + LREL NL +
Sbjct: 551 EEMLYSPDQT--DEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVV 608
Query: 350 IMGNRDGIDEMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGV 408
I GN D + Y L GQ + ++ E+YR A T+G
Sbjct: 609 IAGNIDVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGA 668
Query: 409 FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-HDQQS---VADA 464
F PAF E FGLT++EA GLP AT +GGP +I +G +DP H +Q+ +AD
Sbjct: 669 FAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADF 728
Query: 465 LLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAG 504
+ D W + GL+ I+ ++W + + ++ +AG
Sbjct: 729 FERCKEDPNHWKKVSDAGLQRIYERYTWKIYSERLMT-LAG 768
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 6.6e-27, P = 6.6e-27
Identities = 140/538 (26%), Positives = 237/538 (44%)
Query: 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD 64
N S+HG G+ LG DTGGQV Y+++ RAL +LL R ++ +
Sbjct: 284 NVVIFSVHGYF-GQQDVLGLP-DTGGQVVYILDQVRALEE-------ELLIR-INQQGLG 333
Query: 65 WSYGEPTEMLTPR--------NSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLW 112
+ +P ++ R D ++ + + ++I+R+PF G +++++ ++
Sbjct: 334 F---KPQILVVTRLIPEARGTKCDQELEAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIY 390
Query: 113 PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLF 172
P++ F A + I++ + P I G+Y V
Sbjct: 391 PYLERFTQDATSKILQRLDCK-----------PDLIIGNYTDGNLVASLMATKLGVTQGT 439
Query: 173 TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 232
H+L + K E A+ E++ Y + A+ ++++ ++ +ITST QEI
Sbjct: 440 IAHALEKTKYED--SDAKWK--ELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKD 495
Query: 233 LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNED- 291
++ + + R VS F P+ I PG + P T+ +
Sbjct: 496 RPGQYESHTAFTMPG-LCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKDKRFTKFHPSI 554
Query: 292 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM 351
+ +E M + + KP+I ++AR D KNIT LV+ +G+ + LRE+ANL ++
Sbjct: 555 QELLYNEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVA 614
Query: 352 GNRDGIDEMXXXXXXXXXXXXXXIDKYDLYGQ----VAYPKHHKQSDVPEIYRLAAKTKG 407
G D I+KY L G+ A ++ S E+YR A TKG
Sbjct: 615 GFFDMSKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNS---ELYRCIADTKG 671
Query: 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD-QQSVA-- 462
VF+ PA E FGLT+IEA GLP AT GGP +I ++D +G +DP++ +SV
Sbjct: 672 VFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI--IVDGVSGFHIDPNNGDESVTKI 729
Query: 463 -DALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAGCKPRHPQWQR-NDD 517
D K +D W + GLK I+ ++W K Y ++ + W++ N+D
Sbjct: 730 GDFFSKCRSDGLYWDNISKGGLKRIYECYTW----KIYAEKLLKMGSLYGFWRQVNED 783
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 328 (120.5 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 133/532 (25%), Positives = 230/532 (43%)
Query: 2 IFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAP 61
IFN S+HG G+ LG DTGGQV Y+++ +AL + R++
Sbjct: 271 IFN-VVIFSVHGYF-GQTDVLGLP-DTGGQVVYILDQVKALEDEL-LQRINSQGLNFKPQ 326
Query: 62 DVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIPE 117
+ + P T N + ++ + + + I+RIPF G +++++ ++P++
Sbjct: 327 ILVVTRLIPDAKKTKCNQE--LEPIFGTKYSNILRIPFVTENGILRRWVSRFDIYPYLER 384
Query: 118 FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSL 177
F A I+ ++L GKP I G+Y + H+L
Sbjct: 385 FTKDATTKIL---DILE-----GKPD---LIIGNYTDGNLVASLMANKLGITQATIAHAL 433
Query: 178 GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 237
+ K E + + E + Y + A+ +S+++++ +I ST QEI +
Sbjct: 434 EKTKYED----SDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQY 489
Query: 238 DPVLERKLRARIKRNVSCYGKFMPRMAIIPPGME---FHHIVPQDGDMDGETEGNEDNPA 294
+ + + + R VS F PR I PG + + QD ++
Sbjct: 490 ESHMSFTVPG-LYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDELLY 548
Query: 295 SPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 354
S E + + + +KP+I ++AR D KN+T L + + + + LR+L NL ++ G
Sbjct: 549 SQSEN--DEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFF 606
Query: 355 DGIDEMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPA 413
D I+KY L GQ + ++ E+YR A T+G F+ PA
Sbjct: 607 DASKSKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAFVQPA 666
Query: 414 FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD-QQS---VADALLK 467
E FGLT+IEA + GL AT GGP +I ++D +G +DP + ++S +AD K
Sbjct: 667 HYEAFGLTVIEAMSCGLVTFATNQGGPAEI--IVDGVSGFHIDPSNGEESSDKIADFFEK 724
Query: 468 LVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAGCKPRHPQWQR-NDD 517
D W GL+ I+ ++W K Y +++ + W+ N D
Sbjct: 725 SGMDPDYWNMFSNEGLQRINECYTW----KIYANKVINMGSTYSYWRHLNKD 772
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 127/507 (25%), Positives = 220/507 (43%)
Query: 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD 64
N S HG +N+ LG DTGGQV Y+++ RAL + + R+ + +
Sbjct: 280 NVVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRAL-EIEMLQRIKQQGLNIKPRILI 336
Query: 65 WSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIPEFVD 120
+ P + T + ++ + +S I+R+PF G K+I++ +WP++ + +
Sbjct: 337 LTRLLPDAVGT--TCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE 394
Query: 121 GALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRD 180
A + +S L GKP I G+Y V H+L +
Sbjct: 395 DAA---VELSKELN-----GKPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKT 443
Query: 181 KLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240
K + + +++ Y + A+ +++ ++ +ITST QEI ++
Sbjct: 444 KYPD----SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESH 499
Query: 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300
L + R V F P+ I+ PG + P + T+ + + +
Sbjct: 500 TAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDV 558
Query: 301 WS-EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDE 359
+ E + + +KP++ +AR D KN++ LV+ +G+ LRELANL ++ G+R +
Sbjct: 559 ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRK-ES 617
Query: 360 MXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 418
I++Y L GQ + + E+YR TKG F+ PA E F
Sbjct: 618 KDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAF 677
Query: 419 GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH--DQ--QSVADALLKLVADKQL 474
GLT++EA GLP AT GGP +I +G +DP+ DQ ++AD K D
Sbjct: 678 GLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSH 737
Query: 475 WARCRQNGLKNIH-LFSWPEHCKTYLS 500
W + GL+ I ++W + + L+
Sbjct: 738 WDEISKGGLQRIEEKYTWQIYSQRLLT 764
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 126/510 (24%), Positives = 212/510 (41%)
Query: 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD 64
N S HG N+ LG DTGGQV Y+++ RA+ + + R+ ++ +
Sbjct: 283 NVVIMSPHGYFAQANV-LGYP-DTGGQVVYILDQVRAMENEM-LLRIKQQGLNITPRILI 339
Query: 65 WSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD----KYIAKELLWPHIPEFVD 120
+ P T ++ + + +I+R+PF ++ K+I++ +WP++ F D
Sbjct: 340 VTRLLPDA--TGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTD 397
Query: 121 GALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRD 180
+ +I G P I G+Y V H+L +
Sbjct: 398 D-----------VAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKT 446
Query: 181 KLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240
K + L + Y + + ++++ ++ +ITST QEI ++
Sbjct: 447 KYPN----SDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESH 502
Query: 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300
+ + + R V F P+ I+ PG + P T + + +
Sbjct: 503 MAFTMPG-LYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEV 561
Query: 301 WSEIMRFFTNPR-KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDE 359
+ +F R KP+I ++AR D KN+T LV+ +G L+EL NL ++ G+ G
Sbjct: 562 DNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDH-GNPS 620
Query: 360 MXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 418
I++Y+L G + + + E+YR TKG F+ PAF E F
Sbjct: 621 KDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAF 680
Query: 419 GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALL-----KLVADKQ 473
GLT++E+ GLP AT GGP +I +G +DP+ Q A ALL K D
Sbjct: 681 GLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPY-QGDKASALLVEFFEKCQEDPS 739
Query: 474 LWARCRQNGLKNIH-LFSWPEHCKTYLSRI 502
W + Q GL+ I ++W K Y R+
Sbjct: 740 HWTKISQGGLQRIEEKYTW----KLYSERL 765
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43876 | SPSA_VICFA | 2, ., 4, ., 1, ., 1, 4 | 0.8058 | 0.9888 | 0.8356 | N/A | no |
| Q94BT0 | SPSA1_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7830 | 0.9709 | 0.8331 | yes | no |
| Q9FY54 | SPSA2_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7097 | 0.9675 | 0.8271 | no | no |
| P31927 | SPSA_MAIZE | 2, ., 4, ., 1, ., 1, 4 | 0.5684 | 0.9553 | 0.8005 | N/A | no |
| P31928 | SPSA_SPIOL | 2, ., 4, ., 1, ., 1, 4 | 0.7440 | 0.9743 | 0.8257 | N/A | no |
| Q6ZHZ1 | SPSA4_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.7070 | 0.9675 | 0.8123 | yes | no |
| Q43845 | SPSA_SOLTU | 2, ., 4, ., 1, ., 1, 4 | 0.7903 | 0.9821 | 0.8347 | N/A | no |
| P49031 | SPSA_BETVU | 2, ., 4, ., 1, ., 1, 4 | 0.7468 | 0.9743 | 0.8344 | N/A | no |
| O04932 | SPSA1_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.7729 | 0.9776 | 0.8301 | N/A | no |
| O22060 | SPSA1_CITUN | 2, ., 4, ., 1, ., 1, 4 | 0.9954 | 0.9899 | 0.8382 | N/A | no |
| O04933 | SPSA2_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5825 | 0.9720 | 0.8048 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_1520214 | hypothetical protein (1049 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| PtrSuSY1 | sucrose synthase (EC-2.4.1.13) (805 aa) | • | • | • | 0.915 | ||||||
| PtrSuSY2 | sucrose synthase (EC-2.4.1.13) (803 aa) | • | • | • | 0.915 | ||||||
| eugene3.00440147 | sucrose synthase (EC-2.4.1.13) (815 aa) | • | • | • | 0.915 | ||||||
| estExt_Genewise1_v1.C_1220111 | sucrose synthase (EC-2.4.1.13) (801 aa) | • | • | • | 0.915 | ||||||
| estExt_fgenesh4_pm.C_LG_II0867 | sucrose synthase (EC-2.4.1.13) (812 aa) | • | • | • | 0.914 | ||||||
| gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | ||||||||
| gw1.IV.2527.1 | trehalose-6-phosphate synthase (769 aa) | • | 0.899 | ||||||||
| gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_scaffold_9882000001 | annotation not avaliable (198 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_III000738 | hypothetical protein (861 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 895 | |||
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 0.0 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 1e-177 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-150 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 2e-47 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-34 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 2e-31 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-26 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-25 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 3e-24 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 9e-22 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-20 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 3e-19 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 9e-19 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 2e-17 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-16 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 3e-16 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 5e-16 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 1e-15 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 1e-15 | |
| TIGR02471 | 236 | TIGR02471, sucr_syn_bact_C, sucrose phosphate synt | 2e-15 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 6e-14 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 5e-13 | |
| pfam05116 | 247 | pfam05116, S6PP, Sucrose-6F-phosphate phosphohydro | 9e-12 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 1e-11 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-11 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 1e-11 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-11 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 2e-10 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 2e-10 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 6e-10 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 1e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-09 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 3e-08 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 4e-08 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 4e-08 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 5e-08 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 3e-07 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 7e-07 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 8e-07 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 3e-06 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 4e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 5e-06 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-05 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 5e-05 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 8e-05 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 1e-04 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 1e-04 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-04 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 5e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 8e-04 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 0.001 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 0.003 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 1743 bits (4516), Expect = 0.0
Identities = 687/884 (77%), Positives = 766/884 (86%), Gaps = 11/884 (1%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGL+RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGE
Sbjct: 176 SLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGE 235
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
PTEMLTPR+S++ D+MGESSGAYIIRIPFGP+DKYI KE LWP+IPEFVDGAL+HI+ M
Sbjct: 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNM 295
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
S VLGEQIG G PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGRDKLEQLLKQ
Sbjct: 296 SKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQG 355
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
R+S++EIN+TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFD +LERKLRAR
Sbjct: 356 RMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARA 415
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
+R VSCYG+FMPRMA+IPPGMEF HIVP DGDMDGETEGNE++PA PDPPIWSEIMRFFT
Sbjct: 416 RRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFT 475
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
NPRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMSS S+SVL
Sbjct: 476 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLT 535
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
SVLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG
Sbjct: 536 SVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 595
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 489
LP+VATKNGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLVADKQLWA CRQNGLKNIHLF
Sbjct: 596 LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIHLF 655
Query: 490 SWPEHCKTYLSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDGE 548
SWPEHCKTYLSRIA C+PRHPQWQR+ DDG E SE +SPGDSLRDIQDISLNL D E
Sbjct: 656 SWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKE 715
Query: 549 KSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608
+ S N + ADR +++ENAV +WSK GS+ K Q +GA K+PAL
Sbjct: 716 SNNGSSNVEGSGPP---ADRVAKIENAVRSWSKS------PKGSSAKAQQGSGAGKYPAL 766
Query: 609 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 668
RRRK +FVI+VDC LL K I EAV KER EGS GFILSTSMTISEI SFL SG
Sbjct: 767 RRRKRLFVIAVDCYDDKDLLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGG 826
Query: 669 LSPSDFDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV 727
L+P+DFDA ICNSGS+LYY +LN SE+G V D YHSHIEYRWGGEGLRKTLV+WA+ +
Sbjct: 827 LNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASI 886
Query: 728 TDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGS 787
+KK E+ E+++ E+ ST++CYAF V+ P PPVKELRK+LRIQ LRCH +YC+NG+
Sbjct: 887 NEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGT 946
Query: 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSS 847
R+NVIP+LASRSQALRYL++RWG+EL+ M VFVGESGDTDYEGLLGG+HKTVILKG+ S
Sbjct: 947 RLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSR 1006
Query: 848 SSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891
S Q+HANRSYPL DV+P+DSPNIVQ ++ DI +L++L
Sbjct: 1007 GSEQLHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 518 bits (1337), Expect = e-177
Identities = 222/497 (44%), Positives = 293/497 (58%), Gaps = 69/497 (13%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HGLIRG ++ELGRD+DTGGQ KYV+ELARAL V +VDL+TR + V Y +
Sbjct: 7 SLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQ 66
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
P E + P GA I+R+PFGP+ +Y+ KELLWP++ E D L H+
Sbjct: 67 PIERIAP--------------GARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHL--- 108
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
+ G P IH HYADAG A LS L VP++FTGHSLGR+K +LL
Sbjct: 109 ------RQQGHLPDL---IHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAG 159
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
L +I Y I RRIEAEE +L + +VITST QEIEEQ+ LYD + P
Sbjct: 160 -LKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---------- 208
Query: 250 KRNVSCYGKFMPRMAIIPPGME---FHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR 306
RM +IPPG++ F+ + I + +
Sbjct: 209 -----------ERMQVIPPGVDLSRFYPP----------------QSSEETSEIDNLLAP 241
Query: 307 FFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS 366
F +P KP ILA++RPD +KNI +LV+A+G L+E+ANL L++G RD I +M S
Sbjct: 242 FLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQRE 301
Query: 367 VLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 426
VL VL LID+YDLYG+VAYPKHH+ DVPE+YRLAA+++G+F+NPA EPFGLTL+EAA
Sbjct: 302 VLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAA 361
Query: 427 AHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486
A GLPIVAT +GGP DI NGLLVD D +++A AL ++D W +NG++ +
Sbjct: 362 ACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEGV 421
Query: 487 HL-FSWPEHCKTYLSRI 502
+SW H + YL +
Sbjct: 422 RRHYSWDAHVEKYLRIL 438
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 447 bits (1153), Expect = e-150
Identities = 162/492 (32%), Positives = 222/492 (45%), Gaps = 100/492 (20%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
S+HG + +DTGGQ YV+ELARAL + + VD+ TR++
Sbjct: 6 SLHGSPLAQPGG----ADTGGQNVYVLELARALARL--GHEVDIFTRRIDDALPPIVELA 59
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
P G ++R+P GP +Y+ KE LWP++ EF D L +
Sbjct: 60 P--------------------GVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFL--- 95
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
+ P IH HY D+G A LL+ L +P++ T HSLG K L
Sbjct: 96 ---------RREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAAD 146
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 249
TY+ RRIEAEE L A++ VI ST QE EE + LY +
Sbjct: 147 ---------TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPR---------- 187
Query: 250 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 309
R+ ++PPG++ P + R
Sbjct: 188 ------------RIRVVPPGVDLERFTPYGRA-------------------EARRARLLR 216
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
+P KP ILA+ R DP+K I TL++A+ E LRE ANL ++ G RD I M L
Sbjct: 217 DPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELA 276
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
L +ID+ D +P + D+P +YR A VF+NPA EPFGLT +EA A G
Sbjct: 277 RELGVIDRVD------FPGRVSREDLPALYRAA----DVFVNPALYEPFGLTALEAMACG 326
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-L 488
LP+VAT GGP DI GLLVDP D +++A AL +L+ D L R + GL+
Sbjct: 327 LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARAR 386
Query: 489 FSWPEHCKTYLS 500
++W L
Sbjct: 387 YTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 2e-47
Identities = 145/535 (27%), Positives = 243/535 (45%), Gaps = 80/535 (14%)
Query: 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARA-------------LGSMPG 47
M+FN S HG EN+ LG DTGGQV Y+++ RA L P
Sbjct: 254 MVFN-VVILSPHGYFGQENV-LGLP-DTGGQVVYILDQVRALENEMLQRIKLQGLEITP- 309
Query: 48 VYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFG---PKD- 103
++ ++TR + PD + + + ++ + + A+I+R+PF
Sbjct: 310 --KILIVTRLI--PDAEGTT-----------CNQRLEKVYGTEHAWILRVPFRTENGIIL 354
Query: 104 -KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162
+I++ +WP++ F + A I+ GKP I G+Y+D A+LL
Sbjct: 355 RNWISRFEIWPYLETFAEDAEKEILA--------ELQGKPD---LIIGNYSDGNLVASLL 403
Query: 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222
+ L V H+L + K + + E Y + A+ ++++A++ +ITS
Sbjct: 404 ARKLGVTQCTIAHALEKTKYPD----SDIYWQEFEDKYHFSCQFTADLIAMNAADFIITS 459
Query: 223 TRQEI------EEQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGME---- 271
T QEI Q+ + F P L R V F P+ I+ PG +
Sbjct: 460 TYQEIAGTKDSVGQYESHQAFTMPGLYRV--------VHGIDVFDPKFNIVSPGADESIY 511
Query: 272 FHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTL 331
F + + + E E+ S + E + +P KP+I ++AR D KN+T L
Sbjct: 512 FPYSDKEKRLTNLHPE-IEELLFSLEDN--DEHYGYLKDPNKPIIFSMARLDRVKNLTGL 568
Query: 332 VKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH- 390
V+ +G LREL NL ++ G D + + + + LID+Y L+GQ+ +
Sbjct: 569 VECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQL 628
Query: 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNG 450
+ E+YR A TKG+F+ PA E FGLT++EA GLP AT+ GGP++I + +G
Sbjct: 629 NRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSG 688
Query: 451 LLVDPHDQQSVADALL----KLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 500
+DP+ + A+ ++ K D W + Q GL+ I+ ++W + + L+
Sbjct: 689 FHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT 743
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 3e-34
Identities = 103/477 (21%), Positives = 175/477 (36%), Gaps = 126/477 (26%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG ++V+ELARAL + + V +LT E E
Sbjct: 14 GGAERHVLELARALAARG--HEVTVLTPG-------DGGLPDEE---------------E 49
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 148
G ++R P + + + LL L ++R +
Sbjct: 50 VGGIVVVRPPPLLRVRRLLLLLLLAL-------RLRRLLRRER-------------FDVV 89
Query: 149 HGHYADAGDSAALLSGALNVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIE 207
H H A +AAL + L +P++ T H L +L +L+R + RI
Sbjct: 90 HAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRI- 148
Query: 208 AEELSLDASEIVIT-STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266
I ++ +TR+E+ E G ++ +I
Sbjct: 149 ----------IAVSEATREELRE-------------------------LGGVPPEKITVI 173
Query: 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 326
P G+ + P + R +PVIL + R P+K
Sbjct: 174 PNGV---------------------DTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRK 212
Query: 327 NITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385
+ L++A + R +E ++ L++ G+ +E+ L + L +V
Sbjct: 213 GVDLLLEALAKLR--KEYPDVRLVIVGDGPLREEL-----------EALAAELGLGDRVT 259
Query: 386 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI-- 443
+ D+P +Y A VF+ P+ E FGL L+EA A GLP+VA+ GG ++
Sbjct: 260 FLGFVPDEDLPALYAAAD----VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVE 315
Query: 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 499
GLLV P D +++A+A+L+L+ D +L R + + + FSW
Sbjct: 316 DGE--TGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-31
Identities = 154/557 (27%), Positives = 245/557 (43%), Gaps = 125/557 (22%)
Query: 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARA-------------LGSMPG 47
M+FN S HG N+ LG DTGGQV Y+++ RA L P
Sbjct: 278 MVFN-VVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQGLDIKP- 333
Query: 48 VYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKD 103
++ ++TR + PD + G T N ++ + + ++I+R+PF G
Sbjct: 334 --QILIVTRLI--PD---AKG------TTCNQR--LEKVSGTEHSHILRVPFRTEKGILR 378
Query: 104 KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163
K+I++ +WP++ F + A + I+ GKP I G+Y+D A+LL+
Sbjct: 379 KWISRFDVWPYLETFAEDAASEIL--------AELQGKPDL---IIGNYSDGNLVASLLA 427
Query: 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223
L V H+L + K + + + + Y + A+ ++++ ++ +ITST
Sbjct: 428 HKLGVTQCTIAHALEKTKYPD----SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITST 483
Query: 224 RQEIEE------QWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGME----F 272
QEI Q+ + F P L R V F P+ I+ PG + F
Sbjct: 484 YQEIAGSKDTVGQYESHTAFTLPGLYRV--------VHGIDVFDPKFNIVSPGADMSIYF 535
Query: 273 HHIVPQD--GDMDGETE----GNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 326
+ Q + E E N E + + + +KP+I ++AR D K
Sbjct: 536 PYTEKQKRLTSLHPSIEELLYSPEQN---------DEHIGYLKDRKKPIIFSMARLDRVK 586
Query: 327 NITTLVKAFGECRPLRELANLTLIMGNRDG-----------IDEMSSTSASVLLSVLKLI 375
N+T LV+ +G+ + LREL NL ++ G D I +M S LI
Sbjct: 587 NLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHS-----------LI 635
Query: 376 DKYDLYGQVAYPKHHKQSDVP---EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPI 432
+KY+L GQ + Q++ E+YR A TKG F+ PA E FGLT++EA GLP
Sbjct: 636 EKYNLKGQFRWIA--AQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPT 693
Query: 433 VATKNGGPVDI--HRVLDNGLLVDPH--DQQS--VADALLKLVADKQLWARCRQNGLKNI 486
AT GGP +I V +G +DP+ D+ + +AD K D W + GL+ I
Sbjct: 694 FATCQGGPAEIIVDGV--SGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRI 751
Query: 487 H-LFSWPEHCKTYLSRI 502
+ ++W K Y R+
Sbjct: 752 YECYTW----KIYAERL 764
|
Length = 815 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-26
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 310 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 369
K V+L + R DP+K + L++A + + L ++ + +E+
Sbjct: 196 EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREEL--------- 246
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
KL K L V + + ++ E+ A VF+ P+ E FGL L+EA A G
Sbjct: 247 --EKLAKKLGLEDNVKFLGYVPDEELAELLASAD----VFVLPSLSEGFGLVLLEAMAAG 300
Query: 430 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HL 488
P++A+ GG ++ + GLLV P D + +ADAL +L+ D +L + + +
Sbjct: 301 TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEE 360
Query: 489 FSWPEHCKTYLS 500
FSW + L
Sbjct: 361 FSWERIAEQLLE 372
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-25
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 313 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSV 371
KP+IL + R P+K + L++AF + NL L++ G+ + ++
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFA--LLKEQHPNLKLVIVGDGEEEKKLK---------- 49
Query: 372 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP 431
KL K L V + D+ E+YR+A +F+ P+ E FGL L+EA A G+P
Sbjct: 50 -KLALKLGLEDNVIFVGFVPDEDLIELYRIA----DLFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 432 IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484
++AT GGP +I + + GLLVDP D +++A+A+ KL+ D++L R +N K
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-24
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 292 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM 351
+P PP +E++R +P L + +P+KN+ L++AF L +I+
Sbjct: 174 DPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL-VIV 232
Query: 352 GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFIN 411
G R ++E +L + + L +V + + ++ +YR A F+
Sbjct: 233 GKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGAR----AFVF 278
Query: 412 PAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-DNGLLVDPHDQQSVADALLKLVA 470
P+ E FGL ++EA A G P++A+ + V D L DP D +++A A+ +L+
Sbjct: 279 PSLYEGFGLPVLEAMACGTPVIASNISS---LPEVAGDAALYFDPLDPEALAAAIERLLE 335
Query: 471 DKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
D L R+ GL FSW + + L
Sbjct: 336 DPALREELRERGLARAKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 9e-22
Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 81/357 (22%)
Query: 145 PVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIM 203
P IH H+A G +AALL L +P++ T H ++N +
Sbjct: 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHG-----------------SDVNLLPRKR 136
Query: 204 RRIEAEELSLDASEIVIT-STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPR 262
+L ++ VI S L +K G +
Sbjct: 137 LLRALLRRALRRADAVIAVS--------------------EALADELKA----LGIDPEK 172
Query: 263 MAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322
+ +IP G++ P D +E + K VIL + R
Sbjct: 173 VTVIPNGVDTERFSPAD---------------------RAEARKLGLPEDKKVILFVGRL 211
Query: 323 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382
P+K I L++A R +L +I+G DG + + L + L L D+ G
Sbjct: 212 VPRKGIDYLIEALARLLKKRPDVHL-VIVG--DGPLREALEA---LAAELGLEDRVTFLG 265
Query: 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD 442
V +VP Y A VF+ P+ E FGL L+EA A GLP+VAT GG +
Sbjct: 266 AVP------HEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPE 315
Query: 443 IHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
I +NGLLV P D +++A+A+L+L+AD L R + FSW + L
Sbjct: 316 IITDGENGLLVPPGDPEALAEAILRLLADPWLRLG-RAARRRVAERFSWENVAERLL 371
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 3e-20
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 292 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-I 350
NP P S ++ + ILA+ R P+K L++A+ + ++ + L I
Sbjct: 163 NPLPFPPEEPS------SDLKSKRILAVGRLVPQKGFDLLIEAW--AKIAKKHPDWKLRI 214
Query: 351 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410
+G DG + ++ LI + L +V ++ E Y A+ +F+
Sbjct: 215 VG--DGPER---------EALEALIKELGLEDRVIL--LGFTKNIEEYYAKAS----IFV 257
Query: 411 NPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDI--HRVLDNGLLVDPHDQQSVADALLK 467
+ E F + L+EA A GLP+++ GP +I V NGLLV D +++A+ALL+
Sbjct: 258 LTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV--NGLLVPNGDVEALAEALLR 315
Query: 468 LVADKQLWARCRQNGLKNIHLFSWP 492
L+ D++L R N ++ FS
Sbjct: 316 LMEDEELRKRMGANARESAERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 3e-19
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 370
PV L +AR K I L++A + L L+ G DE + +
Sbjct: 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-G---DGDEENPAAILE--- 238
Query: 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430
I+K L G+V + + DVPE+ A VF+ P++ E L+EA A G
Sbjct: 239 ----IEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEAMAMGR 288
Query: 431 PIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486
P++AT G + V+D NG LV P D +++ADA+ +L+ D +L AR Q K
Sbjct: 289 PVIATDVPGCREA--VIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRA 344
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 9e-19
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 314 PVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK 373
+I +AR P+K+ TL++A A L L++G DG D + + L L
Sbjct: 194 FLIGIVARLHPQKDHATLLRAAALLLKKFPNARL-LLVG--DGPDR--ANLELLALKELG 248
Query: 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIV 433
L DK L G+ +SDVP + VF+ + E F L+EA A GLP+V
Sbjct: 249 LEDKVILLGE--------RSDVPALLNAL----DVFVLSSLSEGFPNVLLEAMACGLPVV 296
Query: 434 ATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWAR 477
AT G ++ V D G LV P D +++A+A+ L+AD L
Sbjct: 297 ATDVGDNAEL--VGDTGFLVPPGDPEALAEAIEALLADPALRQA 338
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 2e-17
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 292 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM 351
+P D + + P +PV+L + R P+KN+ L+ A PLR + L++
Sbjct: 180 HPRRRDEALRAR----LGPPDRPVLLYVGRLAPEKNLEALLDAD---LPLRRRPPVRLVI 232
Query: 352 -GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410
G DG + L+ Y V + ++ Y A VF+
Sbjct: 233 VG--DGPA----------RARLE-----ARYPNVHFLGFLDGEELAAAYASA----DVFV 271
Query: 411 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 470
P+ E FGL ++EA A GLP+VA GGP DI +NGLLV+P D ++ A AL L+A
Sbjct: 272 FPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLA 331
Query: 471 DKQLWARCRQNGLKNIHLFSWPEHC 495
D +L R SW
Sbjct: 332 DPELRRRMAARARAEAERRSWEAFL 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 79.6 bits (196), Expect = 1e-16
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 315 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 374
+ + R P+K + L++AF + L + + +L
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYL------------EEL 153
Query: 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVA 434
+ L +V + ++ + AA VF+ P+ E FGL ++EA A GLP++A
Sbjct: 154 LAALLLLDRVIFLGGLDPEELLALLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIA 210
Query: 435 TKNGGPVDIHRVLDNGLLV 453
T GGP +I GLLV
Sbjct: 211 TDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 3e-16
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 26/186 (13%)
Query: 310 NPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASV 367
RKP I+ +AR P+K + L+KAF + ++++ + TL I G D +++
Sbjct: 200 KQRKPHKIITVARLAPEKQLDQLIKAFA--KVVKQVPDATLDIYGYGDEEEKLK------ 251
Query: 368 LLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 427
+LI++ L V + + D+ E+Y+ A + + + E FGL+L+EA +
Sbjct: 252 -----ELIEELGLEDYVFLKGYTR--DLDEVYQKA----QLSLLTSQSEGFGLSLMEALS 300
Query: 428 HGLPIVATK-NGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484
HGLP+++ N GP +I + D NG LV D +++A+A+++L+ D +L + + +
Sbjct: 301 HGLPVISYDVNYGPSEI--IEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYE 358
Query: 485 NIHLFS 490
N +S
Sbjct: 359 NAERYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 5e-16
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 292 NPASPDPPI--WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL 349
NP + E + P PVILA+ R P+K TL++AF R A L +
Sbjct: 166 NPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-V 224
Query: 350 IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVF 409
I+G DG + L + L +V + QS+ + A +F
Sbjct: 225 ILG--DGPLR---------EELEALAKELGLADRVHFLGF--QSNPYPYLKAAD----LF 267
Query: 410 INPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469
+ + E F L+EA A G P+VAT GP +I +NGLLV D+ ++A A L L+
Sbjct: 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALL 327
Query: 470 ADKQ 473
Sbjct: 328 DLLL 331
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 111/469 (23%), Positives = 172/469 (36%), Gaps = 102/469 (21%)
Query: 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDM 86
D GG Y++E A L G+ VD+ TR E+
Sbjct: 18 DAGGMNVYILETATELARR-GI-EVDIFTRATRPSQ-----PPVVEV------------- 57
Query: 87 GESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 146
+ G + + GP + + KE L + F G L +P +
Sbjct: 58 --APGVRVRNVVAGPYEG-LDKEDLPTQLCAFTGGVL-----------RAEARHEPGYYD 103
Query: 147 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRI 206
IH HY +G LL VP++ T H+L K + + + RRI
Sbjct: 104 LIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK--------NAALADGDTPEPEARRI 155
Query: 207 EAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266
++L +D ++ +I +T +E + R YD DP R+ ++
Sbjct: 156 GEQQL-VDNADRLIANTDEEARDLVRHYDA-DP---------------------DRIDVV 192
Query: 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 326
PG + P GD +E R V+ + R P K
Sbjct: 193 APGADLERFRP--GDRA------------------TERARLGLPLDTKVVAFVGRIQPLK 232
Query: 327 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG---Q 383
L++A E NL +I+ + S S L + LI+ G +
Sbjct: 233 APDVLLRAVAELLDRDPDRNLRVIV--------VGGPSGSGLATPDALIELAAELGIADR 284
Query: 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-PVD 442
V + ++ +YR A V P++ E FGL +EA A G P+VA + GG PV
Sbjct: 285 VRFLPPRPPEELVHVYRAAD----VVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVA 340
Query: 443 IHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSW 491
+ + GLLVD HD ADAL +L+ D + R +++ FSW
Sbjct: 341 V-ADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSW 388
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 1e-15
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 21/193 (10%)
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 370
P K +IL L R PKK + L++AF + + L++ G DE +
Sbjct: 201 PDKRIILFLGRLHPKKGLDLLIEAF--AKLAERFPDWHLVIA---GPDEGG------YRA 249
Query: 371 VLKLI-DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 429
LK I L +V + D A +F+ P+ E FG+ + EA A G
Sbjct: 250 ELKQIAAALGLEDRVTFTGMLYGEDKAAALADAD----LFVLPSHSENFGIVVAEALACG 305
Query: 430 LPIVATKNGGPVDIHRVLDNG-LLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH- 487
P+V T V +++ G V D ++A AL + + Q +NG +
Sbjct: 306 TPVVTTDK---VPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEE 362
Query: 488 LFSWPEHCKTYLS 500
FSW + L
Sbjct: 363 RFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|131524 TIGR02471, sucr_syn_bact_C, sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 2e-15
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 616 VISVDCDSTTGLLDATKKICEAVEKERTEG-SIGFILSTSMTISEIHSFLVSGHLSPSDF 674
+I D D+T LL + + VE R G ++GF ++T ++ S + PS
Sbjct: 1 LIITDLDNT--LLGDDEGLASFVELLRGSGDAVGFGIATGRSVESAKS-RYAKLNLPSP- 56
Query: 675 DAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 734
D I G+++YY E P D ++ HI++ W R+ +V + +
Sbjct: 57 DVLIARVGTEIYYG---PELQP---DRFWQKHIDHDW----RRQAVVEALADI------P 100
Query: 735 GEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPV 794
G + EQ Y P P + ++R+ LR Q+ VI G ++V+P+
Sbjct: 101 GLTLQDDQEQGPFKISYLL---DPEGEPILPQIRQRLRQQSQAAKVIL-SCGWFLDVLPL 156
Query: 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841
AS+ ALRYL RWG+ L +++V D E +L G+ V++
Sbjct: 157 RASKGLALRYLSYRWGLPLEQILVAGDSGND---EEMLRGLTLGVVV 200
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. Length = 236 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 6e-14
Identities = 77/356 (21%), Positives = 143/356 (40%), Gaps = 72/356 (20%)
Query: 148 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 207
H ++ G ++ L +P++ T H++ D + L+R K+ RR
Sbjct: 90 THTPFS-LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLAR--AVVRRKLSRRF- 145
Query: 208 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 267
+ + VI + ++I + R Y +KR + +IP
Sbjct: 146 -----YNRCDAVIAPS-EKIADLLREYG-------------VKRPIE----------VIP 176
Query: 268 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 327
G++ P E + +PV+L + R +KN
Sbjct: 177 TGIDLD-------------------RFEPVDGDD-ERRKLGIPEDEPVLLYVGRLAKEKN 216
Query: 328 ITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 386
I L++AF R L+E ++ L++ G DG + +L + L +V +
Sbjct: 217 IDFLIRAF--ARLLKEEPDVKLVIVG--DG---------PEREELEELARELGLADRVIF 263
Query: 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 446
+ ++P+ Y+ A +F+ + E GL L+EA A GLP+VA G D+
Sbjct: 264 TGFVPREELPDYYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD 319
Query: 447 LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502
+NG L P +++A+ALL+L+ D +L R +N ++ FS+ + + +
Sbjct: 320 GENGFLFPP-GDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 5e-13
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELA---NLTLIMGNRDGIDEMSSTSASV 367
IL++ R KK + L++A L++ L ++ G +
Sbjct: 177 GEPLRILSVGRLVEKKGLDYLLEA---LALLKDRGIDFRLDIV-----GDGPLRD----- 223
Query: 368 LLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLT 421
+ LI + L +V Q +V E+ R A +F+ P+ E +
Sbjct: 224 --ELEALIAELGLEDRVTLLGAKSQEEVRELLRAAD----LFVLPSVTAADGDREGLPVV 277
Query: 422 LIEAAAHGLPIVATKNGGPVDIHRVLD---NGLLVDPHDQQSVADALLKLVADKQLWARC 478
L+EA A GLP+++T G I +++ GLLV P D +++ADA+ +L+ D +L
Sbjct: 278 LMEAMAMGLPVISTDVSG---IPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREM 334
Query: 479 RQNG 482
+ G
Sbjct: 335 GEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|218442 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 9e-12
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 675 DAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 734
D I + G+++YY V D + H++Y W + + + K
Sbjct: 62 DVLITSVGTEIYYG------PSLVPDQAWQEHLDYGWDRQAVV--------EALAKFPG- 106
Query: 735 GEKVLTP-AEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP 793
LT E+ + ++ + +KEL ++L + L VIY +G ++++P
Sbjct: 107 ----LTLQPEEEQRPHKVSYFLDPEAAPAVLKELEQLLEKRGLDVKVIY-SSGRDLDILP 161
Query: 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 836
+ AS+ QALRYL +WG+ +V G+SG+ D E +GGV
Sbjct: 162 LRASKGQALRYLAKKWGLPPENTLV-CGDSGN-DAELFIGGVR 202
|
This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyzes the final step in the pathway of sucrose biosynthesis. Length = 247 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 1e-11
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 297 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRD 355
DP ++ R PV+ + R P K+I T ++A R +++ + ++G D
Sbjct: 277 DPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTD 334
Query: 356 G----IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFIN 411
+E +L++ L V K +V E V +
Sbjct: 335 EDPEYAEE-----------CRELVESLGLEDNV---KFTGFQNVKEYLPKL----DVLVL 376
Query: 412 PAFIEPFGLTLIEAAAHGLPIVATKNGG-PVDIHRVLDN-----GLLVDPHDQQSVADAL 465
+ E L ++EA A G+P+VAT G I D G +V P D +++A A+
Sbjct: 377 TSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436
Query: 466 LKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTY 498
L+L+ D +L + G K + ++ +Y
Sbjct: 437 LRLLKDPELRRAMGEAGRKRVERYYTLERMIDSY 470
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 1e-11
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 324 PKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382
P K + +++ F +++ L++ G DG + +L+ + L
Sbjct: 210 PVKRVEDVIEVFAR---VQQEVPAKLLLVG--DGPE---------RSPAEQLVRELGLTD 255
Query: 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-P- 440
+V + KQ DV E+ ++ +F+ P+ E FGL +EA A G+P++A+ GG P
Sbjct: 256 RVLFLG--KQDDVAELLSIS----DLFLLPSEKESFGLAALEAMACGVPVIASNAGGIPE 309
Query: 441 VDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484
V H V G L D D +++A+ + L+ D++L R +
Sbjct: 310 VVEHGV--TGFLCDVGDVETMAEYAISLLEDEELLQRFSAAARE 351
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 1e-11
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383
P K I +++ F + R +E+ L++G DG E S +L + L
Sbjct: 208 PVKRIDDVIRIFAKVR--KEVPARLLLVG--DG-PERSPA--------ERLARELGLQDD 254
Query: 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-P-V 441
V + KQ V E+ +A +F+ P+ E FGL +EA A G+P+VA+ GG P V
Sbjct: 255 VLF--LGKQDHVEELLSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEV 308
Query: 442 DIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486
H G LVD D +++A+ L L+ D +LW +
Sbjct: 309 VKHGE--TGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRA 351
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 4e-11
Identities = 73/278 (26%), Positives = 107/278 (38%), Gaps = 65/278 (23%)
Query: 214 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI---IPPG- 269
DA+ TS + +W LY R+ AR +F+ + PP
Sbjct: 116 DAT----TSLALLLRSRWALY-----ARRRRRLARRAALFIAVSQFIRDRLLALGFPPEK 166
Query: 270 MEFHHIVPQDGDMDGETEG-NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNI 328
+ H I G + P R P IL + R KK
Sbjct: 167 VHVHPI------------GVDTAKFTPATPA-----------RRPPRILFVGRFVEKKGP 203
Query: 329 TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK-LIDKYDLYGQVAYP 387
L++AF L +I G DG LL+ L+ L L G+V +
Sbjct: 204 LLLLEAFARLARRVPEVRLVII-G--DG----------PLLAALEALARALGLGGRVTFL 250
Query: 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEP------FGLTLIEAAAHGLPIVATKNGGPV 441
++V E+ R A +F+ P+ P + L+EA A G+P+VAT++GG
Sbjct: 251 GAQPHAEVRELMRRAR----IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIP 306
Query: 442 DIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWAR 477
+ V D GLLV D ++A AL +L+AD L AR
Sbjct: 307 EA--VEDGETGLLVPEGDVAALAAALGRLLADPDLRAR 342
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-10
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 416 EPFGLTLIEAAAHGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 472
E FG+ L+EA A G P+++T+ G V++H V GL+V P D ++A+A+ +L+ D
Sbjct: 276 EAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGV--TGLVVPPGDPAALAEAIRRLLEDP 333
Query: 473 QLWARCRQNG 482
+L R +
Sbjct: 334 ELRERLGEAA 343
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 416 EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 475
E F L + EA A G+P++A+ GG ++ R NGLL P D + +A AL +L+ D L
Sbjct: 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLL 333
Query: 476 ARCRQNGLKNIH 487
R R
Sbjct: 334 ERLRAGIEPPRS 345
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 6e-10
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 397 EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH 456
IY A VF+ P+ E F T IEA A G P+VA GG DI G L P
Sbjct: 260 LIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPG 315
Query: 457 DQQSVADALLKLVADKQL------WAR 477
D + +A+ + L+AD AR
Sbjct: 316 DPEDLAEGIEWLLADPDEREELGEAAR 342
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-09
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 28/204 (13%)
Query: 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGID 358
+ R+ + +P IL + R +K + L+ A + + + L G D
Sbjct: 187 DGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAV---HYIPKDVQVVLCAGAPD--- 240
Query: 359 EMSSTSASVLLSVLKLIDKYD--LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE 416
+ V V + + D G + K + ++ E+ A VF+ P+ E
Sbjct: 241 -----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE----VFVCPSIYE 291
Query: 417 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD------QQSVADALLKL 468
P G+ +EA A G P+VA+ GG ++ V+D G LV P + Q +A A+ L
Sbjct: 292 PLGIVNLEAMACGTPVVASATGGIPEV--VVDGETGFLVPPDNSDADGFQAELAKAINIL 349
Query: 469 VADKQLWARCRQNGLKN-IHLFSW 491
+AD +L + G K FSW
Sbjct: 350 LADPELAKKMGIAGRKRAEEEFSW 373
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 315 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 374
VILA+ R K+ L+KAF + L LI G DG + +T + +L
Sbjct: 190 VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-LIAG--DG--PLRAT-------LERL 237
Query: 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVA 434
I L +V D+ Y A +F+ + E FGL + EA A LP+VA
Sbjct: 238 IKALGLSNRVKLLGLR--DDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVA 291
Query: 435 TKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD 471
T GG ++ V D+GL+V D +++A+ + +++
Sbjct: 292 TDAGGVREV--VGDSGLIVPISDPEALANKIDEILKM 326
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 3e-08
Identities = 46/200 (23%), Positives = 75/200 (37%), Gaps = 29/200 (14%)
Query: 308 FTNPRKPVILALARPDPKKNITTLVKAFG---ECRPLRELANLTLIMGN---RDGIDEMS 361
F V+ + R K+ TLV+AF P +I+G+ R ++M
Sbjct: 189 FFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMV 248
Query: 362 STSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGL 420
+ + + P ++ DVP + + +F+ P+ E
Sbjct: 249 RAAG---------------LAHLVWLPG--ERDDVPALMQ----ALDLFVLPSLAEGISN 287
Query: 421 TLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 480
T++EA A GLP++AT GG ++ + G LV P D ++A AL V+D
Sbjct: 288 TILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGA 347
Query: 481 NGLKNIHL-FSWPEHCKTYL 499
G FS Y
Sbjct: 348 AGRARAEQQFSINAMVAAYA 367
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-08
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 292 NPASPDP-PIWSEIMR-----FFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 345
+ DP + E + + KPVIL R K ++A + ++
Sbjct: 158 DLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLK--KDDP 215
Query: 346 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT 405
++ L++ A +L +LI + L +V + H SD+P Y LA
Sbjct: 216 DVHLLIV--GDAQGRRFYYAELL----ELIKRLGLQDRVTFVGH--CSDMPAAYALAD-- 265
Query: 406 KGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 464
+ ++ + E FG T +EA A G P++A+ +GG + R + GLLV P D +++A A
Sbjct: 266 --IVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQA 323
Query: 465 LLKL 468
L ++
Sbjct: 324 LDQI 327
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 4e-08
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 314 PVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMG-----NRDGIDEMSSTSASVL 368
P +LA+ +P+KN L++AF R R A L + G E + +A +
Sbjct: 194 PYVLAVGGIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAELG 253
Query: 369 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 428
L ++ + G V +D+P +YR A F P+ E FGL ++EA A
Sbjct: 254 LDPGAVV----ITGPVP------DADLPALYRCAD----AFAFPSLKEGFGLVVLEALAS 299
Query: 429 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD 471
G+P+VA + P + + DP D S+ADAL +
Sbjct: 300 GIPVVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALDP 341
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 5e-08
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 421 TLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARC 478
L A G P+++T G + VLD GLLV P D ++A+A+ +L+AD +L
Sbjct: 285 VLAYAIGFGKPVISTPVGHAEE---VLDGGTGLLVPPGDPAALAEAIRRLLADPELAQAL 341
Query: 479 RQNGLKNIHLFSWPE 493
R + SW
Sbjct: 342 RARAREYARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 3e-07
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 422 LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481
L E A G P++A+ +G ++ GL+V P D +++A A+L+L+ D + A +N
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGEN 375
Query: 482 GLKNIH-LFSWPEHCKTYL 499
G + + FS + + L
Sbjct: 376 GRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 7e-07
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRP-LRELANLTLIMGNRDGIDEMSSTSASVLL 369
K L++ R + KKNI ++AF + L E N+ L++ G D + + L
Sbjct: 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAG--GYDPRVAENVEYLE 266
Query: 370 SVLKLIDKY-DLYGQVAY----PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424
+ +L ++ L QV + K+ L + + + P+ E FG+ +E
Sbjct: 267 ELQRLAEELLLLEDQVIFLPSISDSQKEL-------LLSSARALLYTPSN-EHFGIVPLE 318
Query: 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484
A G P++A +GGP++ + G L +P + A+A+LKL D L R G K
Sbjct: 319 AMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK 377
Query: 485 NIH-LFS 490
+ FS
Sbjct: 378 RVKEKFS 384
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 8e-07
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDN- 449
+ SD E+ L A+ + F+ PA E FG+ +EA A G P++A GG ++ V+D
Sbjct: 249 RVSD-EELRDLYARARA-FLFPA-EEDFGIVPVEAMASGTPVIAYGKGGALET--VIDGV 303
Query: 450 -GLLVDPHDQQSVADALLKLVADKQLW-ARCRQNGLKNIHLFSWP 492
G+L + +S+A A+ + ++ R + + FS
Sbjct: 304 TGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHAER----FSES 344
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 3e-06
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 47/242 (19%)
Query: 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGS----------MPGVYR 50
M+FN S HG N+ LG DTGGQV Y+++ RAL S + R
Sbjct: 271 MVFN-VVILSPHGYFAQANV-LGY-PDTGGQVVYILDQVRALESEMLVRIKQQGLDITPR 327
Query: 51 VDLLTRQVSAPD-VDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKY 105
+ ++TR + PD V + + E + + +I+R+PF G K+
Sbjct: 328 ILIVTRLL--PDAVGTTCNQRLEKVF------------GTEHTHILRVPFRTEKGILRKW 373
Query: 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 165
I++ +WP++ F + + +I P I G+Y+D A+LL+
Sbjct: 374 ISRFEVWPYLETFAEDVAS-----------EIAAELQAKPDLIIGNYSDGNLVASLLAHK 422
Query: 166 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQ 225
L V H+L + K + + + Y + A+ ++++ ++ +ITST Q
Sbjct: 423 LGVTQCTIAHALEKTK----YPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQ 478
Query: 226 EI 227
EI
Sbjct: 479 EI 480
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKG-VFINPAFIEPFGLTLIEAAAHGLP 431
++ +KY+L +V V ++ +G +F+N + E F + ++EAA+ GL
Sbjct: 241 EMREKYNLQDRVELLGAVPHERVRDVLV-----QGHIFLNTSLTEAFCIAIVEAASCGLL 295
Query: 432 IVATKNGGPVDIHRVLDNGL--LVDPHDQQSVADALLK 467
+V+T+ GG I VL + L +P D +S+ L +
Sbjct: 296 VVSTRVGG---IPEVLPPDMILLAEP-DVESIVRKLEE 329
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 389 HHKQSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 447
D+ + A V + P F L L+EA A GLP+VAT + G + L
Sbjct: 57 LGFVEDLAALLASAD----VALAPLRFGAGSPLKLLEALAAGLPVVAT-DIGAEGLPEDL 111
Query: 448 DNGLLVDPHDQQSVADALLKLVAD 471
G+LV D + A+A+++L+AD
Sbjct: 112 GWGVLV-ADDPEEFAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 1e-05
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 41/227 (18%)
Query: 256 YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPV 315
Y + +P I IVP ++ + N + +P + V
Sbjct: 154 YEERLPNADI--------SIVPNGFCLETYQSNPQPNLRQ----------QLNISPDETV 195
Query: 316 ILALARPDPKKNITTLVKAFGECRPLRELANLTLI-----MGNRDGIDEMSSTSASVLLS 370
+L R P K I L++AF + NL L+ + G E ++ VL +
Sbjct: 196 LLYAGRISPDKGILLLMQAFEKLATAHS--NLKLVVVGDPTASSKG--EKAAYQKKVLEA 251
Query: 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430
++ D+ + G K H Y LA V + E F + +EA A G
Sbjct: 252 AKRIGDRCIMLGGQPPEKMH------NYYPLADL---VVVPSQVEEAFCMVAVEAMAAGK 302
Query: 431 PIVATKNGGPVDIHRVLDNGL---LVDPHDQQSVADALLKLVADKQL 474
P++A+ GG + VL+ L +P S+ + + +AD +L
Sbjct: 303 PVLASTKGGITEF--VLEGITGYHLAEPMTSDSIISDINRTLADPEL 347
|
Length = 380 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 5e-05
Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 25/160 (15%)
Query: 288 GNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANL 347
G + + I + K VI + R +KN L++ F E A L
Sbjct: 167 GIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKL 226
Query: 348 TLIMGN---RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404
L+ G+ + I + L L DK G +DVPE+ +
Sbjct: 227 LLV-GDGELEEEIKKKVKE--------LGLEDKVIFLGVR--------NDVPELLQAM-- 267
Query: 405 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDI 443
VF+ P+ E L LIEA A GLP + + VD+
Sbjct: 268 --DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 8e-05
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 416 EPFGLTLIEAAAHGLPIVATKNGG-P--VDIHRVLDNGLLVDPHDQQSVADALLKLVA-D 471
EPFGL +IEA A G P++A + G P V+ G LVD ++ +A A+ + D
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVT---GFLVDSVEE--LAAAVARADRLD 309
Query: 472 KQLWARCRQ 480
+ A CR+
Sbjct: 310 R---AACRR 315
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 416 EPFGLTLIEAAAHG-LPIV-ATKNGG----PVDIHRVLD--NGLLVDPHDQQSVADAL-- 465
EP GLT + A +G +PIV AT GG +D + G + + ++ ++ AL
Sbjct: 381 EPCGLTQMYAMRYGTVPIVRAT--GGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRR 438
Query: 466 -LKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
L L D + W + ++N + FSW K YL
Sbjct: 439 ALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL 471
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--------NGLLVDPHDQQ 459
+ P+ EP GLT + A +G + + GG D V+D G L + +D
Sbjct: 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT--VVDGDPEAESGTGFLFEEYDPG 425
Query: 460 SVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
++ AL + + D LW ++N + FSW + K Y+
Sbjct: 426 ALLAALSRALRLYRQDPSLWEALQKNAMSQD--FSWDKSAKQYV 467
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHRVLD------NGLLVDPHDQQ 459
V + P+ EP GLT + A +G + + GG D + R G L +
Sbjct: 371 VILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430
Query: 460 SVADALLKLV----ADKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
+A+AL + + A LW + + N + FSW K Y+
Sbjct: 431 HLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYV 472
|
Length = 487 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 5e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI---HRVLDNGLLVDPHDQQSVADA 464
VF+ P+ E G ++EA A G+P+VA + GG DI + G L P D +
Sbjct: 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
Query: 465 LLKLVADKQLWARCRQNGLKNIHLFSW 491
L L+AD +L R + + + W
Sbjct: 394 LETLLADPELRERMGAAAREEVEKWDW 420
|
Length = 465 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 8e-04
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 306 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN--RDGIDEMSST 363
++ +P +P I ++R DP K+ ++ A+ + + L +++G+ D +
Sbjct: 183 KYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE----- 236
Query: 364 SASVLLSVLKL--IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLT 421
V VL+ D D++ P E+ L + V + + E FGLT
Sbjct: 237 GWIVYEEVLEYAEGDP-DIHVLTLPPVSDL-----EVNALQRAST-VVLQKSIREGFGLT 289
Query: 422 LIEAAAHGLPIVATKNGG-PVDI-HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479
+ EA G P++A GG P+ I G LVD ++ A +L L+ D +L +
Sbjct: 290 VTEALWKGKPVIAGPVGGIPLQIEDGE--TGFLVDTVEE--AAVRILYLLRDPELRRKMG 345
Query: 480 QNG 482
N
Sbjct: 346 ANA 348
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 36/206 (17%), Positives = 61/206 (29%), Gaps = 60/206 (29%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG +YV+ELARAL + + V ++T + P + +D
Sbjct: 1 GGAERYVLELARALAAR--GHEVTVVTPR-----------------GPPGRPELEED--- 38
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 148
G + R+P + + + P +
Sbjct: 39 --GVRVHRLPVPRRPSLPGDLRALRRLRRLLRRE---------------------RPDVV 75
Query: 149 HGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEA 208
H H AG A L + VP++ T H L + L ++
Sbjct: 76 HAHGPLAGLLARLAARRRGVPVVVTPHGLALRQGSGLKRRLAR---------------AL 120
Query: 209 EELSLDASEIVITSTRQEIEEQWRLY 234
E L ++ V+ + E E L
Sbjct: 121 ERRLLRRADAVVAVSEAEAELLRALG 146
|
Length = 158 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 423 IEAAAHGLPIVATKNGGPVDIHRVL----DNGLLVDPHDQQSVADALLKLVADKQLWARC 478
+EA A G + A+ GG HR L + G+L D ++A ALL L+ ++ W
Sbjct: 312 LEAMAQGRLVAASDVGG----HRELIRDGETGVLFPAGDPAALAAALLALLDNRAQWPEL 367
Query: 479 RQNGLK 484
R +
Sbjct: 368 RAAARR 373
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 895 | |||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.98 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.98 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.98 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.98 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.97 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.97 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.97 | |
| PLN02887 | 580 | hydrolase family protein | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.96 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.96 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 99.96 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.96 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.96 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.96 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.95 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.95 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.94 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.94 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.93 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.92 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.92 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.9 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.9 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.88 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.87 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.87 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.87 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.87 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.86 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.85 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.84 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.82 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.81 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.8 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.8 | |
| PLN02423 | 245 | phosphomannomutase | 99.79 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.77 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.77 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.76 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.76 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.73 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.73 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.73 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.71 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.71 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.71 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.69 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.67 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.65 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.54 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.54 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.47 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.43 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.42 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.42 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.4 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.38 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.37 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.29 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.25 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.23 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.11 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.11 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.06 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.05 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.01 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.99 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.92 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.9 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.84 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.83 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.82 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.8 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.69 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.62 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.6 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.52 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.5 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.46 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.43 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.37 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.35 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.34 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.32 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.19 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.18 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.14 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.1 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.09 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.09 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.07 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.05 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.98 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.95 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.84 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.8 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.79 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.78 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.76 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.69 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.65 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.64 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.64 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.61 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.54 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.52 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.37 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 97.36 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.35 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.33 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 97.29 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.26 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.24 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.23 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.22 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.19 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 97.19 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.19 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.18 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.18 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.18 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.14 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.14 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.98 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.88 | |
| PLN02954 | 224 | phosphoserine phosphatase | 96.87 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 96.83 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.82 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.81 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 96.79 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.79 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.79 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.76 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.75 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.73 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.73 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.72 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.71 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.69 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.69 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.69 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.68 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.67 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.67 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.63 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.62 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.61 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.61 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.54 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 96.45 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.43 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 96.4 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 96.39 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.38 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.36 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.33 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.17 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.11 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.1 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.09 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 96.09 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.07 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.03 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.98 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 95.97 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.94 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.92 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 95.91 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 95.9 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 95.87 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 95.79 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 95.79 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.71 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 95.66 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.62 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 95.61 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.53 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.47 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.36 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.15 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.04 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.95 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 94.84 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.82 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 94.8 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.78 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.57 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 94.52 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.52 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 94.48 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 94.44 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 94.43 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.38 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.96 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 93.92 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 93.78 | |
| PRK08238 | 479 | hypothetical protein; Validated | 93.64 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 93.56 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.39 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 93.35 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 93.35 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 93.34 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.24 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 93.13 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 93.13 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 93.07 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.06 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 93.04 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 92.78 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 92.76 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 92.4 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 92.17 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 92.1 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.06 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 92.03 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 92.0 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 91.94 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.75 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 91.58 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 91.56 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 90.94 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 90.49 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 90.49 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 90.48 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 90.47 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 90.43 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 90.3 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 90.08 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 89.69 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 89.67 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 89.28 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.98 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 88.93 | |
| PLN02940 | 382 | riboflavin kinase | 88.92 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 88.63 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 88.2 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 87.59 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 87.39 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 85.33 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 84.98 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 84.35 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 84.34 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 83.89 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 83.48 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 83.28 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 83.22 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 82.86 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 82.82 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 81.06 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 81.06 |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-122 Score=1084.99 Aligned_cols=877 Identities=78% Similarity=1.256 Sum_probs=756.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+|||+||++||+|+|+|||+|+||+.+||.+||++|+++||||+|+|+|++..+|.++++|+++.|.+.+...++++
T Consensus 170 ~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~ 249 (1050)
T TIGR02468 170 LYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDG 249 (1050)
T ss_pred eEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999998888999999999999877777777
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
+++...+|++|+|+|++|..+|++++.+|+++..|.+.++.++.++.+.|.+++..+++..|||||+|||+++++++.++
T Consensus 250 ~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~ 329 (1050)
T TIGR02468 250 DEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLS 329 (1050)
T ss_pred ccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHH
Confidence 88888899999999999985699999999999999999999988877888887766555679999999999999999999
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+.+++|+|+|+|+++..++.+++..|..+...+...|++.+++.+|+.++..||.||++|.+++++|++.|..+++.+.+
T Consensus 330 ~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~ 409 (1050)
T TIGR02468 330 GALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILER 409 (1050)
T ss_pred HhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhh
Confidence 99999999999999999988888777655666777788899999999999999999999999999999999999999999
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+||+|+.+||.++|++++++.|||||||++.|.|....................+..+..+++++..+++++|+++||+.
T Consensus 410 ~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~ 489 (1050)
T TIGR02468 410 KLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPD 489 (1050)
T ss_pred hhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCc
Confidence 99999999999999999999999999999999985433211111000011123445667788888889999999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
++||++.||+||..+..+.+.+++.+|+|++++.+.+......+..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 490 p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad 569 (1050)
T TIGR02468 490 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 569 (1050)
T ss_pred cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhh
Confidence 99999999999999975555667877889888777666666677889999999999999999999999999999999995
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
.+.||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|+++|.+++++++.+++++++++
T Consensus 570 ~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr 649 (1050)
T TIGR02468 570 KTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGL 649 (1050)
T ss_pred hcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 55679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCC-CCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccc
Q 002660 484 KNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRND-DGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSE 562 (895)
Q Consensus 484 ~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (895)
+.+++|||+.++++|++.+..+..++++|+... .+.+.+++++|.++++++++++++++++.|....+.+.|. ..+
T Consensus 650 ~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~ 726 (1050)
T TIGR02468 650 KNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNV---EGS 726 (1050)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhcccccccccccccccc---ccc
Confidence 999889999999999999999999888887632 2345667889999999999999555554444444432222 245
Q ss_pred CcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccccccCeEEE--EEecCCCCcchhHHHHHHHHHHHh
Q 002660 563 GNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV--ISVDCDSTTGLLDATKKICEAVEK 640 (895)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~--~DiDGTL~~~~~~~~~~~l~~l~~ 640 (895)
+++.++...+...+.++.+++ .+++++.+++++..++|.++++++||+ +|+|.| ....+.++++++++++
T Consensus 727 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~--~~~~~~l~~~~~~~~~ 798 (1050)
T TIGR02468 727 GPPADRVAKIENAVRSWSKSP------KGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD--KDLLQIIKNIFEAVRK 798 (1050)
T ss_pred cchhhHHHHHHHHHhhccccc------cccccccccccccccCccccccceEEEEEeccCCC--CChHHHHHHHHHHHhc
Confidence 566677766666766666433 268888999999999999899999999 788887 4467788888888874
Q ss_pred hccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC-CCCCCcccchhhHHHhhcccCcchHHHH
Q 002660 641 ERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKT 719 (895)
Q Consensus 641 ~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 719 (895)
....+.+.|+|+|||++.++.+++++.++++..||++||+.|++|||...+ .+...+..|..|..+|.+.|..+.++..
T Consensus 799 ~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~ 878 (1050)
T TIGR02468 799 ERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKT 878 (1050)
T ss_pred cccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHH
Confidence 211246999999999999999999999995337999999999999997321 2234678889999999999999999988
Q ss_pred HHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChH
Q 002660 720 LVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRS 799 (895)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg 799 (895)
+..++....+.+.........+....+..||++|++.++...+.++++++.|+..+..++++++++..+|||+|.++|||
T Consensus 879 L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKg 958 (1050)
T TIGR02468 879 LVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRS 958 (1050)
T ss_pred HHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHH
Confidence 87877754333333333345556677899999999878887888999999999999999999999755999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCC
Q 002660 800 QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCT 879 (895)
Q Consensus 800 ~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~ 879 (895)
.||+||+.+|||+++++++|+||++||||.+||.....+|++.+.++....+.+++.+|.++||+|.++|++.++.+.+.
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~ 1038 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSS 1038 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCC
Confidence 99999999999999999999999999997779999999999999886565667799999999999999999999999999
Q ss_pred hHHHHHHHHHhC
Q 002660 880 TSDIRSSLEQLG 891 (895)
Q Consensus 880 ~dGI~~al~~~~ 891 (895)
.+.|..||+++|
T Consensus 1039 ~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1039 SDDISDALKKLS 1050 (1050)
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-56 Score=516.23 Aligned_cols=460 Identities=28% Similarity=0.473 Sum_probs=350.0
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHH--------hcCCCee----EEEEeecCccCCCCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVSAPDVDWSYG 68 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L--------~~~G~~h----~V~v~t~~~~~~~~~~~y~ 68 (895)
|+ |||+|||+||+++.++ .+|+ ||+||+..||.++|++| +++| | +|+|+|+...+.. ...|.
T Consensus 254 ~~-~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 254 MV-FNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred cc-ceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 66 6999999999988877 5997 69999999999999985 6888 8 8889999875432 34455
Q ss_pred CcccccCCCCCCcccccCCCCCCeEEEecCCCCC-----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCC
Q 002660 69 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK-----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPV 143 (895)
Q Consensus 69 ~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~-----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~ 143 (895)
++.|.. ...++++|+|+|++|. ++|++++.+|+|+..|...+.+++.... +.
T Consensus 328 ~~~e~~------------~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~-----------~~ 384 (784)
T TIGR02470 328 QRLEKV------------YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAEL-----------QG 384 (784)
T ss_pred cccccc------------cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhc-----------CC
Confidence 554443 3457999999999884 2579999999999999999887765311 25
Q ss_pred CCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 144 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
+||+||+|+|+++++|..+++.+|+|+++|.|++...++. ..+. .+......|++..++.+|..+++.||.||++|
T Consensus 385 ~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT 460 (784)
T TIGR02470 385 KPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITST 460 (784)
T ss_pred CCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECc
Confidence 7999999999999999999999999999999999766532 1121 22234456777788888999999999999999
Q ss_pred hHHHH------HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 224 RQEIE------EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 224 ~~~~~------~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
.+++. .||+.|..|... .. +++..| .+.+.+|+.+||||+|.+.|.|.....+.. ......-..-.
T Consensus 461 ~qEi~~~~~~v~qY~s~~~ft~p--~L--y~vvnG---id~~~~Ki~VVpPGVD~~iF~P~~~~~~r~-~~~~~~ie~ll 532 (784)
T TIGR02470 461 YQEIAGTKDSVGQYESHQAFTMP--GL--YRVVHG---IDVFDPKFNIVSPGADESIYFPYSDKEKRL-TNLHPEIEELL 532 (784)
T ss_pred HHHhhhhhhhhhhhhhccccccc--ce--eeeecC---ccCCcCCeEEECCCcChhhcCCCCchhhhh-hhhhcchhhhc
Confidence 88765 355544443321 00 011222 223567999999999999998754321100 00000000000
Q ss_pred CchhHHhhhh--cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-ccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRF--FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG-IDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~--~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~-~~~~~~~~~~~~~~l~~~ 374 (895)
.........+ ...+++++|+++||+++.||++.+++|+..+..+.+..++ +|+|++.+ .+....+..+...++..+
T Consensus 533 ~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~L-VIVGGg~~~~~s~d~ee~~~i~~L~~l 611 (784)
T TIGR02470 533 FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNL-VVVAGKLDAKESKDREEQAEIEKMHNL 611 (784)
T ss_pred cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEE-EEEeCCcccccccchhHHHHHHHHHHH
Confidence 0001111222 3367889999999999999999999999987655555666 45665532 222222334567889999
Q ss_pred HHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 375 IDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
++++++.++|.|+|.. +..++.++|+.++.++||||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 612 a~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLV 691 (784)
T TIGR02470 612 IDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHI 691 (784)
T ss_pred HHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 9999999999999975 667899999864444479999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++.+.
T Consensus 692 dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 692 DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999886 59999999999999999 6999999999999886
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-55 Score=509.08 Aligned_cols=459 Identities=27% Similarity=0.444 Sum_probs=343.9
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHH--------HHHhcCCCeeEE----EEeecCccCCCCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWSYG 68 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La--------~~L~~~G~~h~V----~v~t~~~~~~~~~~~y~ 68 (895)
|+ |||+|||+||++++.+ ++|+ ||||||..||.++| ++|+++| |+| +|+||...+.. ...|.
T Consensus 278 ~~-~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 278 MV-FNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred Hh-Hhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 66 4999999999999998 5997 99999999998766 6777889 866 59999886554 45666
Q ss_pred CcccccCCCCCCcccccCCCCCCeEEEecCCCCC----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCC
Q 002660 69 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVW 144 (895)
Q Consensus 69 ~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~ 144 (895)
++.|.+ ...++++|+|+|++|. .+|++|+.+|+|+..|...+..++.+.. +.+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~-----------~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAEL-----------QGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhc-----------CCC
Confidence 666555 3356999999999984 2577999999999999999887764311 256
Q ss_pred CcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 145 PVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
||+||+|||+++++|..+++++|+|+|+|.|+++..++. ..+ ..+......|++..++.+|+.++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~-~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSD-IYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccC-CcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877742 222 2333455677888888899999999999999999
Q ss_pred HHHH------HHHhhhcCCC-hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 225 QEIE------EQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 225 ~~~~------~~~~~~~~~~-~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++. .||..+..|. +. | +|+-.|+ +.+.+++.+||+|+|...|.|...... ....+.+.-....
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~----L-~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~~~-rl~~l~n~I~~~l 555 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPG----L-YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEKQK-RLTSLHPSIEELL 555 (815)
T ss_pred HHHhcccchhhhhhcccccccch----h-hhhhccc---cccccCeeEECCCCChhhcCCCChHHh-hHHhhcccchhhc
Confidence 8886 3444443332 22 1 2333444 234559999999999999886442110 0000000000000
Q ss_pred CchhHHhhhhc--CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRFF--TNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~~--~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~-~~~~~~~~~~~~~~~l~~~ 374 (895)
.........++ ..+++++|+++||+++.||++.+|+|++.+.++.+..++ +|+|++. .......+..+...++..+
T Consensus 556 ~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~L 634 (815)
T PLN00142 556 YSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSL 634 (815)
T ss_pred CChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHH
Confidence 00001111222 356788999999999999999999999988654544555 4667652 1111112223345778899
Q ss_pred HHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 375 IDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
++++++.++|.|.|... ..+..++|+..+...|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|+++
T Consensus 635 a~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV 714 (815)
T PLN00142 635 IEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHI 714 (815)
T ss_pred HHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 99999999999998654 23344444421111299999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++++.
T Consensus 715 ~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 715 DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999987654 69999999999999999 6999999999999876
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=487.69 Aligned_cols=438 Identities=50% Similarity=0.855 Sum_probs=342.9
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
.||++||+||+++++++.+|++|+.||+++|+.+|+++|+++|.+|+|+|+|+...++...+.|..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~--------- 71 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERI--------- 71 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEe---------
Confidence 38999999999999999999999999999999999999999993239999998654333333343322222
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
.+|++++|+++++. .+.+....|+++..|...+.+.+++. ..+|||||+|++.++.++..++
T Consensus 72 -----~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~DvIH~h~~~~~~~~~~~~ 133 (439)
T TIGR02472 72 -----APGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQQ------------GHLPDLIHAHYADAGYVGARLS 133 (439)
T ss_pred -----CCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHHc------------CCCCCEEEEcchhHHHHHHHHH
Confidence 25999999998776 46566667777777776666655431 1369999999988888898899
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|+|.|+.+......+...+. ....+...+.+..++..|+..++.+|.|+++|..++.+++..+..+.+
T Consensus 134 ~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 208 (439)
T TIGR02472 134 RLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208 (439)
T ss_pred HHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc----
Confidence 999999999999875433221111111 111222233444555568889999999999998766665544433333
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+++.+||||||.+.|.+..... ........+++++..++.++|+++||+.
T Consensus 209 -----------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~ 258 (439)
T TIGR02472 209 -----------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISRPD 258 (439)
T ss_pred -----------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcCCc
Confidence 3899999999999997643111 1111223344455567788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
+.||++.+|+|++.+......+++.+++|++++.+.+++...++..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 259 ~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~ 338 (439)
T TIGR02472 259 RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAA 338 (439)
T ss_pred ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999999987643344466666778888776776655667778888999999999999999999999999999874
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
.+.|+||+||..|+||++++||||||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.+++++++++
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI 418 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 002660 484 KNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 484 ~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+.+ ++|||+.++++|+++++
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 999 69999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-52 Score=503.04 Aligned_cols=558 Identities=13% Similarity=0.131 Sum_probs=391.0
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++. ..++-+.+|-.++... .+. ...+... -...+-.+|.|-..+
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~--~f~-----------~lp~~~~---ll~~ll~~Dligf~t 197 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE--VFR-----------LLPWREE---ILEGLLGADLIGFHT 197 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChH--HHh-----------hCCChHH---HHHHHhcCCeEEeCC
Confidence 4899999997777888776653 5788999998776431 110 0111111 123678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..++... .+.|+.. ...++.+.|+.. ++.++|+|||++.|.+..... .......
T Consensus 198 ~~~~r~Fl~~~-------~~~l~~~~~~~~~~~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~ 256 (726)
T PRK14501 198 YDYVRHFLSSV-------LRVLGYETELGEIRLGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIR 256 (726)
T ss_pred HHHHHHHHHHH-------HHHcCCccCCCeEEECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHH
Confidence 88777665532 1222211 223466666655 799999999999998643111 0011111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEec----C-CCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGN----R-DGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~----~-~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++.. .+++++|+++||+++.||+..+|+||+.+.+..+.+ ++++ ++|. + +++++++++..+..++|+..
T Consensus 257 ~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~ 334 (726)
T PRK14501 257 RLRQD--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGE 334 (726)
T ss_pred HHHHH--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 12222 256789999999999999999999999987545543 3443 4442 2 44556666667777777777
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccCCC
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 449 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~~~ 449 (895)
.+..++.+.++|.+.++.++++++|+.| ||||+||.+||||++++||||| |+||+++..|++.++. .
T Consensus 335 ~~~~~~~pv~~~~~~~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~ 406 (726)
T PRK14501 335 FGTVDWTPIHYFYRSLPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----E 406 (726)
T ss_pred cCCCCcceEEEEeCCCCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----c
Confidence 7777788888999999999999999999 9999999999999999999999 6688889999999884 5
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 002660 450 GLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 528 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (895)
|++|+|+|++++|++|.++++++ +++....+++++.+.+|||..|+++|++.|+++...+.....
T Consensus 407 ~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~-------------- 472 (726)
T PRK14501 407 ALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFAS-------------- 472 (726)
T ss_pred CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccc--------------
Confidence 99999999999999999999965 556666677888888999999999999999987654321111
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccc
Q 002660 529 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608 (895)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (895)
.. ++....+.++.+|+
T Consensus 473 ------~~------------------------------~~~~~~~~~~~~y~---------------------------- 488 (726)
T PRK14501 473 ------KP------------------------------ITPAAAEEIIARYR---------------------------- 488 (726)
T ss_pred ------cc------------------------------CCccCHHHHHHHHH----------------------------
Confidence 00 11234667889998
Q ss_pred cccCeEEEEEecCCCCc--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDSTT--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+|+|++|+||||+. .+++.+.++|++|+++ +|+.|+|+|||++..+.+++..+++ ++|++
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liae 559 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAE 559 (726)
T ss_pred hccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEe
Confidence 67789999999999942 3678999999999996 4799999999999999999987665 69999
Q ss_pred CCceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCC
Q 002660 681 SGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM 760 (895)
Q Consensus 681 nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 760 (895)
||++++..++.+.. .. .....|. +.+..+++.+....... +.+ ....++++++.+.+.
T Consensus 560 nG~~i~~~~~~w~~--~~-------~~~~~w~-~~v~~il~~~~~~~~gs--------~ie----~k~~~l~~~~r~~d~ 617 (726)
T PRK14501 560 HGAWSRAPGGEWQL--LE-------PVATEWK-DAVRPILEEFVDRTPGS--------FIE----EKEASLAWHYRNADP 617 (726)
T ss_pred CCEEEeCCCCceEE--CC-------CcchhHH-HHHHHHHHHHHhcCCCc--------EEE----EcceEEEEEccCCCH
Confidence 99999865421100 00 0122332 44555554443322111 111 113456666543321
Q ss_pred C---ccHHHHHHHHHhc--cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 761 T---PPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 761 ~---~~~~~l~~~l~~~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
. ...+++.+.+... ...+.++ +++ +++||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+
T Consensus 618 ~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~ 690 (726)
T PRK14501 618 ELGEARANELILALSSLLSNAPLEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRAL 690 (726)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhc
Confidence 1 0123445555432 2233333 334 599999999999999999999 777788888 666666 7 9999996
Q ss_pred ---ceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 ---HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 ---g~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+.+|+|||+. +.|.|...++ +++...|+.+
T Consensus 691 ~~~~~~v~vG~~~-----------------------s~A~~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 691 PETAITVKVGPGE-----------------------SRARYRLPSQ--REVRELLRRL 723 (726)
T ss_pred ccCceEEEECCCC-----------------------CcceEeCCCH--HHHHHHHHHH
Confidence 7999999865 2344555655 5588888765
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=474.71 Aligned_cols=543 Identities=14% Similarity=0.129 Sum_probs=393.2
Q ss_pred cEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 146 VAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 146 DvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|+|..|.+...+++..+.++ ...++-|.+|..++..- ++. ...+.. .-...+-.||.|-..|.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--ifr-----------~LP~r~---eiL~glL~aDlIGFht~ 266 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYK-----------TLPIRE---ELLRALLNSDLIGFHTF 266 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH--HHh-----------hCCcHH---HHHHHHhcCCeEEecCH
Confidence 79999998777777777765 45789999998766431 110 000111 12346789999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHh-----ccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIK-----RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
..+..+... ..+.|+.+.. .|+.+.|+.+ ++.++|.|||++.|....... ....
T Consensus 267 ~yar~Fl~~-------~~r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~~~-------------~~~~ 325 (854)
T PLN02205 267 DYARHFLSC-------CSRMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLSLP-------------ETEA 325 (854)
T ss_pred HHHHHHHHH-------HHHHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhcCh-------------hHHH
Confidence 888776552 2334443322 3677788887 899999999999886432111 1122
Q ss_pred hhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCccccccchHHHHHHH
Q 002660 300 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLSV 371 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G~~~~~~~~~~~~~~~~~~l 371 (895)
...+++..+..+++++|+.++|+|+.|||...+.||++|++.+|.+ ++++| + +.+++|++++.+..+.+++|
T Consensus 326 ~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rI 405 (854)
T PLN02205 326 KVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRI 405 (854)
T ss_pred HHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHH
Confidence 2333443332346899999999999999999999999998777766 44442 2 45678889999999999999
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc--------------------CCC
Q 002660 372 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH--------------------GLP 431 (895)
Q Consensus 372 ~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~--------------------G~P 431 (895)
|+.+++.+|.+.+++...++.+++.++|+.| ||+++||++|||||+++||++| |+.
T Consensus 406 N~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvL 481 (854)
T PLN02205 406 NETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSML 481 (854)
T ss_pred HhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccCccccccccccccccCCCCce
Confidence 9999999999999999999999999999999 9999999999999999999987 678
Q ss_pred EEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCC
Q 002660 432 IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHP 510 (895)
Q Consensus 432 Vvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~ 510 (895)
|||..+|+..++ ..+++|||+|++++|+||.++|+++ ++++...+..++++..++...|++.|+..+++....+.
T Consensus 482 iLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~ 557 (854)
T PLN02205 482 VVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHS 557 (854)
T ss_pred EeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 889999999888 4689999999999999999999965 45566666667777999999999999999988743221
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCC
Q 002660 511 QWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKS 590 (895)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (895)
.... -.+.++++|++ +++++++++...++++.+|+
T Consensus 558 ~~~~--------------------~~~g~g~~~~~---------------~~~~~~~~~l~~~~i~~~y~---------- 592 (854)
T PLN02205 558 RRRC--------------------WGIGFGLSFRV---------------VALDPNFRKLSMEHIVSAYK---------- 592 (854)
T ss_pred hhhh--------------------ccccccccccc---------------ccccccccccCHHHHHHHHH----------
Confidence 1111 01123344444 56777888889999999999
Q ss_pred CCCccccccCcCCCCccccccCeEEEEEecCCCC------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHH
Q 002660 591 GSTDKVDQNTGAAKFPALRRRKHIFVISVDCDST------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL 664 (895)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~kli~~DiDGTL~------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l 664 (895)
++.+|+|++|+||||. ..+++.+.++|++|.+. +|+.|+|+|||++.++.+++
T Consensus 593 ------------------~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 593 ------------------RTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred ------------------hhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHh
Confidence 6788999999999993 25678899999998776 58999999999999999999
Q ss_pred HhCC-CCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhH---HHhhcccCcchHHHHHHhh----hhhccccccccCC
Q 002660 665 VSGH-LSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYH---SHIEYRWGGEGLRKTLVRW----ASQVTDKKAESGE 736 (895)
Q Consensus 665 ~~l~-l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 736 (895)
.... + ++||+||+++...+.. .|. ......|. +.+..+++.+ ++...+.+
T Consensus 652 ~~~~~l------~laaEHG~~ir~~~~~----------~w~~~~~~~~~~w~-~~v~~i~~~y~ertpGs~IE~K----- 709 (854)
T PLN02205 652 SPCEKL------GIAAEHGYFLRLKRDV----------EWETCVPVADCSWK-QIAEPVMQLYTETTDGSTIEDK----- 709 (854)
T ss_pred CCCCCe------EEEEeCCEEEEeCCCc----------eeeecchhhhHHHH-HHHHHHHHHHhcCCCchhheec-----
Confidence 7753 4 6999999999865421 111 00112232 2223333323 23222222
Q ss_pred cccccccccCCceEEEEEeeCCCC-Cc--cHHHHHHHHHhccCeE-EEEEecCCeeEEeecCCCChHHHHHHHHH---Hh
Q 002660 737 KVLTPAEQLSTNYCYAFSVQKPGM-TP--PVKELRKVLRIQALRC-HVIYCQNGSRINVIPVLASRSQALRYLYL---RW 809 (895)
Q Consensus 737 ~~~~~~~~~~~~~k~~~~~~~~~~-~~--~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~g~sKg~al~~L~~---~~ 809 (895)
...+.+++++.+. .. ..+++...+.....+. ..+.+.. +++||.|+|+|||.|++.|++ ++
T Consensus 710 -----------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~gvnKG~Al~~Ll~~~~~~ 777 (854)
T PLN02205 710 -----------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQGVSKGLVAKRLLSIMQER 777 (854)
T ss_pred -----------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 4566677654321 10 1234444444321111 1234444 499999999999999999985 46
Q ss_pred CCCcccEEEEecCCCCCCccccccCcc
Q 002660 810 GVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 810 gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
|++++.+++ +||+.| | ++||+.++
T Consensus 778 g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 778 GMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred CCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 999999988 555656 6 99999886
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=467.63 Aligned_cols=535 Identities=12% Similarity=0.088 Sum_probs=376.8
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++.+.+|..++..- ++. .++ +.+ .-...+-.||.|-..|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e--~fr--~lp---------~r~---~il~gll~aDligF~t 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE--IYK--TLP---------SRS---ELLRAVLTADLIGFHT 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH--HHh--hCC---------CHH---HHHHHHhcCCEEEeCC
Confidence 479999998777788777765 46899999998766431 110 001 111 1224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..+.... .+.|+.. ...++.+.|+.. ++.+||+|||++.|.+..... .......
T Consensus 212 ~~y~r~Fl~~~-------~r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-------------~~~~~~~ 270 (797)
T PLN03063 212 YDFARHFLSAC-------TRILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-------------EVKQHMK 270 (797)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765532 2233322 234566666666 899999999999887532110 0011111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.+++. ..++++|+++||+++.||+..+|+||+.+.+.++.+ +++|+ + |+++.++.+++...++.++++..
T Consensus 271 ~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~ 348 (797)
T PLN03063 271 ELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGR 348 (797)
T ss_pred HHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcc
Confidence 22222 246789999999999999999999999987656655 35443 2 24455666666666666677777
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccCCCe
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 450 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~~~g 450 (895)
++..++.+.+++.+.++.+++.++|+.| ||||+||++||||++++||||||+| +|+|..+|..+.+ +.+|
T Consensus 349 ~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~a 422 (797)
T PLN03063 349 FGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGA 422 (797)
T ss_pred cccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCe
Confidence 7777888888899999999999999999 9999999999999999999999998 8888888877765 4579
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 451 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGD 529 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (895)
++|||+|++++|++|.++|+ ++++++++.+..++++.+++|..|++.|++.++++...+.....
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~--------------- 487 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR--------------- 487 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc---------------
Confidence 99999999999999999999 66778888888999999999999999999999887654321111
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCcccc
Q 002660 530 SLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609 (895)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (895)
+. .+......++.+|+ .
T Consensus 488 -----~~------------------------------~~~l~~~~~~~~y~----------------------------~ 504 (797)
T PLN03063 488 -----NI------------------------------PLELPEQDVIQQYS----------------------------K 504 (797)
T ss_pred -----CC------------------------------CCCCCHHHHHHHHH----------------------------h
Confidence 00 01234567889998 6
Q ss_pred ccCeEEEEEecCCCC-----------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEE
Q 002660 610 RRKHIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 678 (895)
Q Consensus 610 ~~~kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I 678 (895)
+.+++||+|+||||. ..+++.+.++|++|.+. ++..|+|+|||+...+..++...++ +++
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~ 575 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLA 575 (797)
T ss_pred ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEE
Confidence 778999999999993 12667899999999997 5889999999999999999987666 599
Q ss_pred EcCCceEeeccCCCCC-CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 679 CNSGSDLYYSTLNSED-GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 679 ~~nGa~I~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
++||+++...++.+.. .....+..|...+. ..++...++.+++..+.+ .+.+.|+++.
T Consensus 576 aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~-----~~l~~~~~rtpGs~iE~K----------------~~sla~HyR~ 634 (797)
T PLN03063 576 AENGMFLRHTSGEWVTTMPEHMNLDWVDGVK-----NVFKYFTDRTPRSYVEKS----------------ETSLVWNYEY 634 (797)
T ss_pred EeCCEEEecCCCceeeccccccChhHHHHHH-----HHHHHHHHhCCCcEEEEc----------------CeEEEEEcCC
Confidence 9999998754321110 00001122322211 122333444555555554 5667788764
Q ss_pred CCCC---ccHHHHHHHHHhc---cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh------CCCcccEEEEecCC-C
Q 002660 758 PGMT---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW------GVELSKMVVFVGES-G 824 (895)
Q Consensus 758 ~~~~---~~~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~------gi~~~~viaf~Gd~-n 824 (895)
.+.. ....++...+... ...+.+ ..+.+.+||.|.|+|||.|++.|++++ +-+. +++.++||+ .
T Consensus 635 adp~~g~~~a~el~~~l~~~~~~~~~~~v--~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~-dfvl~~Gdd~~ 711 (797)
T PLN03063 635 ADVEFGRAQARDMLQHLWAGPISNASVDV--VRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPI-DFVFCSGYFLE 711 (797)
T ss_pred CChHHHHHHHHHHHHHHHHhhccCCCcEE--EECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCC-CEEEEeCCCCC
Confidence 4211 2234455554221 123433 344469999999999999999999987 2233 345446665 6
Q ss_pred CCCccccccCcce
Q 002660 825 DTDYEGLLGGVHK 837 (895)
Q Consensus 825 n~D~~eMl~~ag~ 837 (895)
+ | ++||++.+-
T Consensus 712 ~-D-EdmF~~l~~ 722 (797)
T PLN03063 712 K-D-EDVYTFFEP 722 (797)
T ss_pred C-c-HHHHHhccc
Confidence 6 8 999998763
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-47 Score=448.05 Aligned_cols=535 Identities=13% Similarity=0.108 Sum_probs=382.9
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
=|+|.+|.+...+++..+.++. ..++-|.+|..++..- ++. .++ +.. .-...+-.||.|-.-|
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~E--ifr--~LP---------~r~---elL~glL~aDlIGFqT 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSE--IHR--TLP---------SRS---ELLRSVLAADLVGFHT 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChH--HHh--hCC---------cHH---HHHHHHhcCCeEEeCC
Confidence 3799999987778888887654 5788999998766431 110 001 111 1224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..+.... .+.|+.+ ...+|.+.|+.+ ++.++|.|||++.|....... .......
T Consensus 296 ~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-------------~v~~~~~ 354 (934)
T PLN03064 296 YDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-------------QVQQHIK 354 (934)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765532 2333333 234577777776 799999999999997532111 1112222
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEE--E----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN--LTLI--M----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~--l~li--v----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++... .++++|++++|+++.|||...|+||+++++.+|.+. ++++ + +++++|+.++++..+.+++||..
T Consensus 355 ~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 355 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 432 (934)
T ss_pred HHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 333322 367899999999999999999999999877677653 4433 1 55677888999999999999999
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccCCC
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 449 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~~~ 449 (895)
++..+|.+.+++...++.+++.++|+.| ||+|+||++|||||+++||||| |++||+...|+..++ +..
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~ 505 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAG 505 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCc
Confidence 9999999999999999999999999999 9999999999999999999999 788887667766665 346
Q ss_pred eEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 002660 450 GLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 528 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (895)
|++|||+|++++|++|.++|+ ++++++++.+..++.+..+|+..|++.|++.+......+.....
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~-------------- 571 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTR-------------- 571 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccc--------------
Confidence 899999999999999999999 67788888899999999999999999999999877543211111
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccc
Q 002660 529 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608 (895)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (895)
+ . .+......++.+|+
T Consensus 572 ------~-~-----------------------------~~~l~~~~~~~~y~---------------------------- 587 (934)
T PLN03064 572 ------Q-V-----------------------------PPQLPPEDAIQRYL---------------------------- 587 (934)
T ss_pred ------c-c-----------------------------CCCCCHHHHHHHHH----------------------------
Confidence 0 0 01334567888998
Q ss_pred cccCeEEEEEecCCCC-----c------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCC
Q 002660 609 RRRKHIFVISVDCDST-----T------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 671 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-----~------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~ 671 (895)
.+.+++||+|+||||. . .+++.+.++|++|.+. ++..|+|+|||+...+..++..+++
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L-- 662 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM-- 662 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc--
Confidence 6778999999999993 1 1457889999999997 6889999999999999999988776
Q ss_pred CCCCEEEEcCCceEeeccCCCC-CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceE
Q 002660 672 SDFDAFICNSGSDLYYSTLNSE-DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYC 750 (895)
Q Consensus 672 ~~~d~~I~~nGa~I~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 750 (895)
+++++||+++...+..+. ......+..|...+. ..++...++.+++..+.+ .+.
T Consensus 663 ----~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~-----~ile~~~eRtPGS~IE~K----------------~~S 717 (934)
T PLN03064 663 ----WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVK-----HVFEYFTERTPRSHFETR----------------ETS 717 (934)
T ss_pred ----eEEeeCCeEEecCCCcceeccccccchHHHHHHH-----HHHHHHHhcCCCcEEEEc----------------CcE
Confidence 599999999875432211 000011123322221 122333444555555554 566
Q ss_pred EEEEeeCCC--CC-ccHHHHHHHHHh-c--cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhC----C-CcccEEEE
Q 002660 751 YAFSVQKPG--MT-PPVKELRKVLRI-Q--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG----V-ELSKMVVF 819 (895)
Q Consensus 751 ~~~~~~~~~--~~-~~~~~l~~~l~~-~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~g----i-~~~~viaf 819 (895)
+.|+++..+ .. ....++.+++.. . ...+.+ ..+.+++||.|.|+|||.|++.|++++. . ..-++|.+
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V--~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc 795 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV--VQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLC 795 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE--EeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEE
Confidence 777776442 11 113455555522 1 123443 3444599999999999999999999762 1 12245555
Q ss_pred ecCCCCCCccccccCcc
Q 002660 820 VGESGDTDYEGLLGGVH 836 (895)
Q Consensus 820 ~Gd~nn~D~~eMl~~ag 836 (895)
+||+..|| ++||++..
T Consensus 796 ~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 796 IGHFLGKD-EDIYTFFE 811 (934)
T ss_pred eCCCCCCc-HHHHHHHh
Confidence 77754337 99999864
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=379.76 Aligned_cols=402 Identities=26% Similarity=0.353 Sum_probs=293.1
Q ss_pred EeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccccc
Q 002660 6 YFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 85 (895)
Q Consensus 6 I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~ 85 (895)
|++++.|.. +...+-..+.||+++++.+|+++|+++| |+|+|+|+....+.. +..
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~------~~~------------- 55 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQP------PVV------------- 55 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCC------Ccc-------------
Confidence 678888885 3222222346999999999999999999 999999975321110 000
Q ss_pred CCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc
Q 002660 86 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 165 (895)
Q Consensus 86 ~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~ 165 (895)
...+|+++++++..+. .......+...+..|...+++.+. .. ...+||+||+|.+..+++++.+++.
T Consensus 56 -~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 56 -EVAPGVRVRNVVAGPY-EGLDKEDLPTQLCAFTGGVLRAEA------RH-----EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred -ccCCCcEEEEecCCCc-ccCCHHHHHHHHHHHHHHHHHHHh------hc-----cCCCCCeEEechHHHHHHHHHHHHh
Confidence 1125899999876554 211111111111112211111111 10 1247999999998778888888888
Q ss_pred CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHH
Q 002660 166 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245 (895)
Q Consensus 166 ~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l 245 (895)
.++|+|+|.|+.+......+. .... .........|+..++.+|.|+++|+...+.+...+..
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~~-~~~~--------~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 184 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAALA-DGDT--------PEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYDA--------- 184 (405)
T ss_pred cCCCEEEeccchHHHHHHhcc-CCCC--------CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCC---------
Confidence 899999999987532211000 0000 0001111235667899999999999877766554421
Q ss_pred HHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCC
Q 002660 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 325 (895)
Q Consensus 246 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~ 325 (895)
+..++.+||||+|.+.|.+.. ......+++.++++++|+++||+.+.
T Consensus 185 -------------~~~ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 185 -------------DPDRIDVVAPGADLERFRPGD--------------------RATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred -------------ChhhEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCCCCcEEEEecCCCcc
Confidence 223899999999998886432 01123345555678999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 326 KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 326 Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
||++.+++|++.+.+..+..++.+ ++|+..... .....++..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999864444434654 677532111 01245677888899999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 405 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 405 ~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++.++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHccc
Q 002660 485 NIHLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 485 ~~~~~s~~~~a~~~~~~~~~~~ 506 (895)
.+++|||+.++++++++|.+++
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8889999999999999999765
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=381.94 Aligned_cols=439 Identities=18% Similarity=0.198 Sum_probs=285.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+|||.+.+ | -.-+||...++..|+++|+++| |+|+|+|+.+.. ....+..... ..........
T Consensus 1 m~i~~vs~e~~----P-----~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~~-~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA----P-----LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQV-VGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc----c-----CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCceE-EEEeeeEEEE
Confidence 79999998875 1 1338999999999999999999 999999987532 1000000000 0000000000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHH------HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGD 157 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~------f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~ 157 (895)
......+|+++++++.. .+..+..+..+.+. |...++..+.+ + ..+|||||+|+|.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~--------~----~~~pDiiH~h~w~~~~ 131 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFAFFSWAAAEFAEG--------L----DPRPDIVHAHDWHTGL 131 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHHHHHHHHHHHHHh--------c----CCCCceEEECCcHHHH
Confidence 00012358888888752 23333333333322 12222222221 1 1479999999999999
Q ss_pred HHHHHhccC-----CCCEEEEeCCCchhhHH--HHHHHhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCChHHHHH
Q 002660 158 SAALLSGAL-----NVPMLFTGHSLGRDKLE--QLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEE 229 (895)
Q Consensus 158 ~~~~~~~~~-----~ip~v~t~H~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~ 229 (895)
++..+++.. ++|+|+|+|++...... ..+..-.++..... ....+...+..++.++..||.|+++|+...++
T Consensus 132 ~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~e 211 (466)
T PRK00654 132 IPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYARE 211 (466)
T ss_pred HHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHH
Confidence 888887553 79999999998543210 00100000100000 00001111223556789999999999988777
Q ss_pred HHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCchhHHhhhhc
Q 002660 230 QWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PDPPIWSEIMRFF 308 (895)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 308 (895)
+...+..+. +... ++.+..++.+||||||.+.|.|..... ....+...... ........+++++
T Consensus 212 i~~~~~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~g 276 (466)
T PRK00654 212 ITTPEFGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFG 276 (466)
T ss_pred hccccCCcC--hHHH-----------HHhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhC
Confidence 643211100 0000 112234899999999999998753211 00000000000 0011123345566
Q ss_pred CCC-CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe-
Q 002660 309 TNP-RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY- 386 (895)
Q Consensus 309 ~~~-~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~- 386 (895)
.++ +.++|+++||+.++||++.+++|++++.+ ...++ +++|+++. .+..++..++.+++. ++.+
T Consensus 277 l~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~ 342 (466)
T PRK00654 277 LPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQ 342 (466)
T ss_pred CCCCCCcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEE
Confidence 553 67899999999999999999999999863 23444 46787742 234567777777763 4554
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC------CCeEEeCCCCHHH
Q 002660 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQS 460 (895)
Q Consensus 387 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~------~~g~lv~p~d~~~ 460 (895)
.++ +.+.+..+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|++.++ .+|++++|.|+++
T Consensus 343 ~g~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~ 417 (466)
T PRK00654 343 IGY-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAED 417 (466)
T ss_pred EeC-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHH
Confidence 554 445567899999 99999999999999999999999999999999999999887 8999999999999
Q ss_pred HHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 461 VADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 461 la~ai~~ll~---~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
++++|.++++ +++.+.++++++++ ++|||+..+++|+++|++++.
T Consensus 418 la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 418 LLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 9999999987 67778888777753 689999999999999998764
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=367.51 Aligned_cols=396 Identities=40% Similarity=0.622 Sum_probs=301.3
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||+|++.|+.+-+.+ | .|+.||+++++.+|+++|+++| |+|+|+|.....+... .
T Consensus 1 ~~~~~~~~~~~~~~~---~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~------~------------- 55 (398)
T cd03800 1 RIALISLHGSPLAQP---G-GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP------I------------- 55 (398)
T ss_pred CeEEEeccccccccC---C-CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC------c-------------
Confidence 588899998644332 2 3789999999999999999999 9999999754321110 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
....+++.+++++..+. .+.++..+++++..|...+...+... ..+||+||+|.+..++++..+++
T Consensus 56 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 56 -VELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRRE------------GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred -cccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHhc------------CCCccEEEEecCccchHHHHHHh
Confidence 11235889999887655 44555556666666666655554431 02799999999888888888899
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|+|++.|+............ ..+....+...|+..++.+|.|+++|....+.+...+..
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 184 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA-------- 184 (398)
T ss_pred hcCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc--------
Confidence 999999999998764332111000 000112223346778999999999999887776655432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..++.+||||+|.+.|.+..... ..+......+++++|+++||+.+
T Consensus 185 --------------~~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 185 --------------YPRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred --------------cccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 112689999999998886533110 01222334567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.||++.+++|+..+.+..+...+ +++|++..... .....++...++.+++.+++.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~~~~~l-~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a-- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELRERANL-VIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA-- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhCCCeEE-EEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC--
Confidence 99999999999999754333344 46777653211 11234567778888998999999999999999999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 405 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 405 ~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
|++++||..|++|++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.++++++++++
T Consensus 304 --di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~ 381 (398)
T cd03800 304 --DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLR 381 (398)
T ss_pred --CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hcCCHHHHHHHHH
Q 002660 485 NI-HLFSWPEHCKTYL 499 (895)
Q Consensus 485 ~~-~~~s~~~~a~~~~ 499 (895)
.+ ++|||+.++++|+
T Consensus 382 ~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 382 RARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 99 7999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=373.83 Aligned_cols=447 Identities=17% Similarity=0.164 Sum_probs=293.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcc-cc-----cCCC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EM-----LTPR 77 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~-e~-----~~~~ 77 (895)
|||+|||.-.. .-.-+||..-++..|.++|++.| |+|.|+++.+..-.......... +. +. .
T Consensus 482 mkILfVasE~a---------P~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~-g 549 (977)
T PLN02939 482 LHIVHIAAEMA---------PVAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFD-G 549 (977)
T ss_pred CEEEEEEcccc---------cccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEEEEeec-C
Confidence 89999995543 12568999999999999999999 99999999875321110000000 00 00 0
Q ss_pred CCCcccccCCCCCCeEEEecCCC-CCCcccccccCCCChH---HHH---HHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 78 NSDDFMDDMGESSGAYIIRIPFG-PKDKYIAKELLWPHIP---EFV---DGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 78 ~~~~~~~~~~~~~gv~i~~i~~~-~~~~~~~~~~~~~~l~---~f~---~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
..+...-.....+|+.++.+... +. .|+.+..+..+-+ +|. ..++.++.. ..++||||||
T Consensus 550 ~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~------------~~~~PDIIH~ 616 (977)
T PLN02939 550 NLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFKRFSYFSRAALELLYQ------------SGKKPDIIHC 616 (977)
T ss_pred ceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHHHHHHHHHHHHHHHHh------------cCCCCCEEEE
Confidence 00000001112346777777531 21 2333333332221 222 112222111 1267999999
Q ss_pred ccccchhHHHHHhc------cCCCCEEEEeCCCchhhHHH--HHHHhhccHHHHH---h-hhhhhHHHHHHHhhhcccCE
Q 002660 151 HYADAGDSAALLSG------ALNVPMLFTGHSLGRDKLEQ--LLKQARLSRDEIN---A-TYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 151 h~~~~~~~~~~~~~------~~~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~~~---~-~~~~~~~~~~e~~~l~~ad~ 218 (895)
|.|.+++++..+.+ ..++|+|+|+|++.++.... .+..-.++...+. . ...+...+...+..+..||.
T Consensus 617 HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~ 696 (977)
T PLN02939 617 HDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNI 696 (977)
T ss_pred CCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCe
Confidence 99988887443222 24589999999986543211 1110001111110 0 00011223334456778999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA-SPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~-~~~ 297 (895)
|+++|+..++++...+.. ++... ++.+..++.+||||||++.|.|.....-. ..+..... ...
T Consensus 697 VtTVSptYA~EI~te~G~---GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPatD~~L~--~~Ys~~dl~GK~ 760 (977)
T PLN02939 697 VTTVSPTYAQEVRSEGGR---GLQDT-----------LKFHSKKFVGILNGIDTDTWNPSTDRFLK--VQYNANDLQGKA 760 (977)
T ss_pred eEeeeHHHHHHHHHHhcc---chHHH-----------hccccCCceEEecceehhhcCCccccccc--cccChhhhhhhh
Confidence 999999998887652211 11111 23444589999999999999886421100 00000000 011
Q ss_pred CchhHHhhhhcCCC---CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNP---RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~~~~~---~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
......+++++.+. +.++|+++||+.++||++.+++|+..+.. ....+ +|+|+|++ ..+..++..+
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqL-VIvGdGp~--------~~~e~eL~~L 829 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQF-VLLGSSPV--------PHIQREFEGI 829 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEE-EEEeCCCc--------HHHHHHHHHH
Confidence 12234455666653 56899999999999999999999988753 33333 57898864 2234677788
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc--------
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-------- 446 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~-------- 446 (895)
+.+++..++|.|+|.++......+|+.| |+||+||++||||++++|||+||+|+|++++||..|+|.+
T Consensus 830 a~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~ 905 (977)
T PLN02939 830 ADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPV 905 (977)
T ss_pred HHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCcccccc
Confidence 8999988999999997766677899999 9999999999999999999999999999999999998865
Q ss_pred -CCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 447 -LDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 447 -~~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
+.+|++|+|.|+++++++|.+++. +++.|++++++++. +.|||+.++++|.++|++++.+
T Consensus 906 eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 906 ELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999875 79999999886643 6899999999999999998754
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=365.26 Aligned_cols=399 Identities=16% Similarity=0.143 Sum_probs=286.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC--CCCCCcccccCCCCCCc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD--WSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~--~~y~~~~e~~~~~~~~~ 81 (895)
|||++++.+++ |+.||.+.++.+|+++|+++| |+|+|+|+....|... ..|.... .
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~--~------- 58 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR--Y------- 58 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc--c-------
Confidence 79999997776 789999999999999999999 9999999863322211 1111000 0
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHH
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSA 159 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~ 159 (895)
.....+|++++|++....... ..+.+... ...+.......+...+ ..+||+||+|.+ .....+
T Consensus 59 ---~~~~~~~i~v~r~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 59 ---RRESEGGVTVWRCPLYVPKQP-------SGLKRLLH-LGSFALSSFFPLLAQR----RWRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred ---eeeecCCeEEEEccccCCCCc-------cHHHHHHH-HHHHHHHHHHHHhhcc----CCCCCEEEEeCCcHHHHHHH
Confidence 001135899999986322000 00111110 0001111111111111 156999999976 335566
Q ss_pred HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 160 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 160 ~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
..+++..++|+|+++|+.+++.. ...+...... ..++... .|+++++.+|.|+++|+...+.+...
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~---~~~~~~~~~~---~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------ 189 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAA---FGLGLLKGGK---VARLATA--FERSLLRRFDNVSTISRSMMNKAREK------ 189 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHH---HHhCCccCcH---HHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc------
Confidence 77888899999999999876442 1112211111 1122222 37778999999999999877765332
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 319 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~v 319 (895)
|.+..++.+||||+|.+.|.+.... .....+.+++.++++++|+|+
T Consensus 190 -----------------~~~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 190 -----------------GVAAEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred -----------------CCCcccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1122389999999999888653210 011233445556677899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 398 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~l 398 (895)
||+.+.||++.+++|++.+.+ .+++. +|+|+|+. .+++.++++.+++. +|.|+|+++.+++..+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998842 34455 48898864 35566778888886 7999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCC----CchHHHHHHHcCCCEEEcCCCC--chhccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 399 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAHGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 399 y~~A~~~~dv~v~ps~~Eg----~gl~~~Ea~a~G~PVvas~~gg--~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++++|+++++++|.++++++
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999988 5677899999999999999876 457776 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 473 QLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 473 ~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
++++++++++++.+ ++|||+.++++|++.|++++.+
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999 5999999999999999988753
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=383.24 Aligned_cols=416 Identities=15% Similarity=0.134 Sum_probs=281.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcc-cccCCCCCCc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EMLTPRNSDD 81 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~-e~~~~~~~~~ 81 (895)
+|+|+|||.+.. |. .-+||...++..|+++|+++| |+|.|+|+.+............. ..+.... ..
T Consensus 587 pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~-~~ 654 (1036)
T PLN02316 587 PMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG-TE 654 (1036)
T ss_pred CcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCC-EE
Confidence 489999998875 11 358999999999999999999 99999999865311100000000 0000000 00
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCCh---HHH---HHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHI---PEF---VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 155 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l---~~f---~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~ 155 (895)
..-.....+|+.++.+.... .++....+..+. .+| ...++.++.+ ...+|||||||+|.+
T Consensus 655 ~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~------------~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 655 IKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGERFGFFCHAALEFLLQ------------SGFHPDIIHCHDWSS 720 (1036)
T ss_pred EEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHHHHHHHHHHHHHHHHh------------cCCCCCEEEECCChH
Confidence 00000112477777776421 122222222221 122 2222222211 125799999999988
Q ss_pred hhHHHHHhcc------CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHH
Q 002660 156 GDSAALLSGA------LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEE 229 (895)
Q Consensus 156 ~~~~~~~~~~------~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~ 229 (895)
++++++++.. .++|+|+|+|++.... .. .+.++..||.|+++|+...++
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~------lk~~l~~AD~ViTVS~tya~E 775 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NH------IGKAMAYADKATTVSPTYSRE 775 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hH------HHHHHHHCCEEEeCCHHHHHH
Confidence 8888887653 3589999999874211 00 113578999999999988877
Q ss_pred HHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCchhHHhhhh
Q 002660 230 QWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP--ASPDPPIWSEIMRF 307 (895)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 307 (895)
+...+. +. .+..++.+||||||++.|.|.....-.. .+.... ..........++++
T Consensus 776 I~~~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~--~y~~~~~~~gK~~~k~~Lr~~l 833 (1036)
T PLN02316 776 VSGNSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPV--PYTSENVVEGKRAAKEALQQRL 833 (1036)
T ss_pred HHhccC-cc-------------------cccCCEEEEECCccccccCCcccccccc--cCCchhhhhhhhhhHHHHHHHh
Confidence 654321 00 1123899999999999998754211000 000000 00001122345566
Q ss_pred cCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCC--CCcE
Q 002660 308 FTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL--YGQV 384 (895)
Q Consensus 308 ~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l--~~~v 384 (895)
+++ ++.++|+++||+.++||++.|++|+..+.+ ....+ +|+|+|++ ..+..++..++.++++ .++|
T Consensus 834 GL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd--------~~~e~~l~~La~~Lg~~~~~rV 902 (1036)
T PLN02316 834 GLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPD--------PRIQNDFVNLANQLHSSHHDRA 902 (1036)
T ss_pred CCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCC--------HHHHHHHHHHHHHhCccCCCeE
Confidence 665 367999999999999999999999998853 33444 57898864 2235677788888765 5689
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC-------------CCeE
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-------------DNGL 451 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~-------------~~g~ 451 (895)
.|.+.++......+|+.| |+||+||++||||++++|||+||+|+|++++||+.|+|.++ .+|+
T Consensus 903 ~f~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 903 RLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred EEEecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 888775332234799999 99999999999999999999999999999999999999874 5899
Q ss_pred EeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 452 LVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
+|++.|+++++.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+++.
T Consensus 979 lf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 979 SFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred EeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999986 355566788888887 58999999999999998764
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=359.52 Aligned_cols=367 Identities=20% Similarity=0.198 Sum_probs=271.0
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||+++++.+|+++|+++| |+|+|+|+....+. ..+
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-------~~~------------ 48 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-------GIR------------ 48 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-------Ccc------------
Confidence 7899986664 789999999999999999999 99999997532110 000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccch--hHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--DSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~--~~~~~~ 162 (895)
....+++++++|..+. .....+. ....+...+.+.+. +.+|||||+|..... ..+..+
T Consensus 49 --~~~~~i~v~~~p~~~~---~~~~~~~-~~~~~~~~l~~~~~--------------~~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 49 --YLTNGLKVYYLPFVVF---YNQSTLP-TFFGTFPLLRNILI--------------RERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred --cccCceeEEEecceec---cCCcccc-chhhhHHHHHHHHH--------------hcCCCEEEECCCCchHHHHHHHH
Confidence 0124788888886432 1111111 11111111111111 167999999986433 345667
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|+|.|+.+.... . . ..+..+ .++..++.+|.++++|+...+.+.... ...
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~--~------~-------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~---- 166 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFAD--A------S-------SIHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SLD---- 166 (398)
T ss_pred hhhcCCcEEEEecccccccc--h------h-------hHHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CCC----
Confidence 88889999999998643110 0 0 000111 134568899999999987665432221 112
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
..++.+||||+|.+.|.+.... ..+++++++++||+
T Consensus 167 -----------------~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 167 -----------------PERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred -----------------hhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 2389999999999888753311 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
.+.||++.+++|+..+.+. .+++.+ ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 345554 7888763 3556788889999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 402 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
| |++|+||..|+||++++||||||+|||+++.||..|++.++ .+++++ .|.++++++|.++++++.+...++.+
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 345554 48999999999999987766677888
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 482 GLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
+++.+ ++|||+..+++++++|++++..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 88888 6999999999999999998753
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=368.75 Aligned_cols=441 Identities=18% Similarity=0.174 Sum_probs=287.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCC-CCCccccc---CCCCC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWS-YGEPTEML---TPRNS 79 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~-y~~~~e~~---~~~~~ 79 (895)
|||+|+|.... | -.-+||...++..|+++|+++| |+|.|+++.+..-..... ........ .....
T Consensus 1 m~i~~vs~E~~----P-----~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----P-----FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----c-----ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 79999997764 1 1348999999999999999999 999999987643111000 00000000 00000
Q ss_pred CcccccCCCCCCeEEEecCCCCCCccccc-ccCCC--C---hHH---HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 80 DDFMDDMGESSGAYIIRIPFGPKDKYIAK-ELLWP--H---IPE---FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 80 ~~~~~~~~~~~gv~i~~i~~~~~~~~~~~-~~~~~--~---l~~---f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
....-.....+|++++++.... ++.+ ..+.. + ..+ |...++..+.+ ...+|||||+
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~------------~~~~~DiiH~ 134 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSG------------LGWQPDVVHA 134 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh------------cCCCCCEEEE
Confidence 0000001123578888876532 1111 01111 1 112 22222222211 1267999999
Q ss_pred ccccchhHHHHHhccCC---CCEEEEeCCCchhhH--HHHHHHhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 151 HYADAGDSAALLSGALN---VPMLFTGHSLGRDKL--EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 151 h~~~~~~~~~~~~~~~~---ip~v~t~H~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|.|.+++++..+++..+ +|+|+|+|++..... ...+....++..... ..+.+...+..++.++..||.|+++|+
T Consensus 135 hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~ 214 (473)
T TIGR02095 135 HDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSP 214 (473)
T ss_pred CCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCH
Confidence 99999999888887766 999999999864321 001111000100000 011111123345678999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCchhHH
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN-PASPDPPIWSE 303 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 303 (895)
...+++....... .+...+ ..+..++.+||||||.+.|.|.....-. ..+... ...........
T Consensus 215 ~~~~ei~~~~~~~--~l~~~l-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l 279 (473)
T TIGR02095 215 TYAREILTPEFGY--GLDGVL-----------KARSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEAL 279 (473)
T ss_pred hHHHHhcCCcCCc--cchhHH-----------HhcCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHH
Confidence 8877764321110 000001 0122489999999999999875321100 000000 00011112233
Q ss_pred hhhhcCCC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 304 IMRFFTNP--RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 304 ~~~~~~~~--~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
+++++.+. +.++|+++||+.++||++.+++|+.++.+ ...++ +|+|+++. ++..++..++.+++
T Consensus 280 ~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~l~~~~~~~~-- 345 (473)
T TIGR02095 280 QEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LGGQL-VVLGTGDP---------ELEEALRELAERYP-- 345 (473)
T ss_pred HHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--cCcEE-EEECCCCH---------HHHHHHHHHHHHCC--
Confidence 45565554 78999999999999999999999999863 22333 47788751 23455666666554
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC------CCeEEeCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~------~~g~lv~p 455 (895)
.++.|.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|+|+++.||..|++.++ .+|++++|
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~ 421 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE 421 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC
Confidence 568887877777889999999 99999999999999999999999999999999999999988 89999999
Q ss_pred CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 456 HDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 456 ~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
.|+++++++|.+++. +++.++++++++++ ++|||+.++++|+++|+++
T Consensus 422 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 422 YDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999999999988 89999999887753 5899999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=360.93 Aligned_cols=377 Identities=19% Similarity=0.205 Sum_probs=272.3
Q ss_pred cceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCc
Q 002660 2 IFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 2 ~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~ 81 (895)
-.|||+++. |.. + .+..||++.++.+|+++|+++| |+|+|+|+....+. +
T Consensus 57 ~~mrI~~~~-~~~--------~-~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~---------~--------- 106 (465)
T PLN02871 57 RPRRIALFV-EPS--------P-FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ---------E--------- 106 (465)
T ss_pred CCceEEEEE-CCc--------C-CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc---------c---------
Confidence 358999986 332 1 2578999999999999999999 99999997532111 0
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHH
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAA 160 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~ 160 (895)
..++++++++..+. .+.... .+.. .+...+...+++ .+||+||+|... ..+.+.
T Consensus 107 -------~~g~~v~~~~~~~~-~~~~~~-~~~~--~~~~~l~~~i~~--------------~kpDiIh~~~~~~~~~~~~ 161 (465)
T PLN02871 107 -------FHGAKVIGSWSFPC-PFYQKV-PLSL--ALSPRIISEVAR--------------FKPDLIHASSPGIMVFGAL 161 (465)
T ss_pred -------ccCceeeccCCcCC-ccCCCc-eeec--cCCHHHHHHHHh--------------CCCCEEEECCCchhHHHHH
Confidence 12555554433221 111110 0000 111122222322 679999999863 344555
Q ss_pred HHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChH
Q 002660 161 LLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240 (895)
Q Consensus 161 ~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~ 240 (895)
.+++..++|+|++.|+......... ... ...+... ..++...+.+|.|+++|+...+.+...+.
T Consensus 162 ~~ak~~~ip~V~~~h~~~~~~~~~~------~~~---~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----- 225 (465)
T PLN02871 162 FYAKLLCVPLVMSYHTHVPVYIPRY------TFS---WLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV----- 225 (465)
T ss_pred HHHHHhCCCEEEEEecCchhhhhcc------cch---hhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC-----
Confidence 6778889999999998754332111 000 0011111 12455688999999999987776654321
Q ss_pred HHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc-CCCCCcEEEEE
Q 002660 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-TNPRKPVILAL 319 (895)
Q Consensus 241 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~il~v 319 (895)
.+..++.+||||+|.+.|.+..... ..+.++. ..+++++|+|+
T Consensus 226 -----------------~~~~kv~vi~nGvd~~~f~p~~~~~-------------------~~~~~~~~~~~~~~~i~~v 269 (465)
T PLN02871 226 -----------------TAANRIRVWNKGVDSESFHPRFRSE-------------------EMRARLSGGEPEKPLIVYV 269 (465)
T ss_pred -----------------CCcCeEEEeCCccCccccCCccccH-------------------HHHHHhcCCCCCCeEEEEe
Confidence 1123899999999999987643110 1111221 23467899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
||+.+.||++.++++++.+. +..+ +|+|+|+. .+++.+++.. .+|.|+|+++.+++..+|
T Consensus 270 Grl~~~K~~~~li~a~~~~~----~~~l-~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 270 GRLGAEKNLDFLKRVMERLP----GARL-AFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CCCchhhhHHHHHHHHHhCC----CcEE-EEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHHHH
Confidence 99999999999999998773 2333 48898764 2334444442 369999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc---CCCeEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~---~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 476 (895)
+.| |++|+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++++++.++
T Consensus 330 ~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 330 ASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred HHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 999 9999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHH-HHHcccCCC
Q 002660 477 RCRQNGLKNIHLFSWPEHCKTYLS-RIAGCKPRH 509 (895)
Q Consensus 477 ~~~~~~~~~~~~~s~~~~a~~~~~-~~~~~~~~~ 509 (895)
++++++++.+++|||+.+++++++ .|+++....
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 698887654
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=357.84 Aligned_cols=449 Identities=18% Similarity=0.144 Sum_probs=281.3
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCc--ccccCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP--TEMLTPRN 78 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~--~e~~~~~~ 78 (895)
|.-|||+|+|.-.. | =.-+||..-++..|.++|+++| |+|.|+++.+..= ....... ...+.. .
T Consensus 1 ~~~~~il~v~~E~~----p-----~~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~-~ 66 (485)
T PRK14099 1 MTPLRVLSVASEIF----P-----LIKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPD-L 66 (485)
T ss_pred CCCcEEEEEEeccc----c-----ccCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEee-e
Confidence 77899999995553 1 2679999999999999999999 9999999976431 0000000 000000 0
Q ss_pred CC-cccccCCCCCCeEEEecCCCCCCccccccc-CC------CChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 79 SD-DFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LW------PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 79 ~~-~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~-~~------~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
.. ...-.....+|+.++.+... .++.+.. +. +|.+.+.+.+ .+-+.....+ ..+ ...++|||||+
T Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~-~f~~a~~~~~-~~~--~~~~~pDIiH~ 139 (485)
T PRK14099 67 FGGPARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFA-ALARAAAAIG-QGL--VPGFVPDIVHA 139 (485)
T ss_pred CCceEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHH-HHHHHHHHHH-hhh--ccCCCCCEEEE
Confidence 00 00000011235655555321 1111110 11 1222211111 0101111111 100 01268999999
Q ss_pred ccccchhHHHHHhc--cCCCCEEEEeCCCchhhH--HHHHH-HhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 151 HYADAGDSAALLSG--ALNVPMLFTGHSLGRDKL--EQLLK-QARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 151 h~~~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~--~~~~~-~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|.|.+++++.++.. ..++|+|+|+|++..... ...+. .|. +..... ....+...+...+..+..||.|+++|+
T Consensus 140 Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~ 218 (485)
T PRK14099 140 HDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSP 218 (485)
T ss_pred CCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecCh
Confidence 99988888876653 346899999999854321 00110 111 111000 000111112235667999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CchhHH
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPIWSE 303 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 303 (895)
..++++...+... .+...| +.+..++.+||||||++.|.|.....-. ..+........ ......
T Consensus 219 ~~a~ei~~~~~g~--gl~~~l-----------~~~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 219 TYALEIQGPEAGM--GLDGLL-----------RQRADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAAL 283 (485)
T ss_pred hHHHHHhcccCCc--ChHHHH-----------HhhCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHH
Confidence 8887765432111 000111 1122489999999999999875421100 00000000000 001223
Q ss_pred hhhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 304 IMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 304 ~~~~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
+++++.+ ++.++|+++||+.++||++.+++|+..+.+ ....+ +++|+|+. ++..++.+++.++.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--
Confidence 4455554 356899999999999999999999998853 23344 47788752 23455666666654
Q ss_pred CcE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC---------CCe
Q 002660 382 GQV-AYPKHHKQSDVPEIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL---------DNG 450 (895)
Q Consensus 382 ~~v-~~~g~~~~~el~~ly~-~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~---------~~g 450 (895)
+++ .|.|+ .++++.+|. .| |+||+||.+||||++.+|||+||+|+|++++||..|+|.++ .+|
T Consensus 350 ~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 344 78898 788999885 58 99999999999999999999999988889999999998775 589
Q ss_pred EEeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 451 LLVDPHDQQSVADALLK---LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~---ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
++++|.|+++++++|.+ ++++++.+++++++++. ++|||+..+++|+++|++++..
T Consensus 424 ~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999997 66799999999998863 6899999999999999998753
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=353.02 Aligned_cols=378 Identities=22% Similarity=0.268 Sum_probs=275.4
Q ss_pred eeEeeeecccccccCcccCCCCCC-CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~-~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
|||++|+.... |+ .||.++++.+|+++|+++ |+|+|+|.... ..
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~~------------------- 45 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--RF------------------- 45 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--hh-------------------
Confidence 79999986553 66 499999999999999886 57777765321 00
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~ 162 (895)
...++.+.+++.... +. .....+..+...+. .. . ...+||+||+|.+.+++.+..+
T Consensus 46 -----~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~-~~-------~------~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 46 -----DSEGLTVKGYRPWSE---LK--EANKALGTFSVDLA-MA-------N------DPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred -----cCCCeEEEEecChhh---cc--chhhhhhhhhHHHH-Hh-------h------CCCCCCeEeecchhhhhHHHHH
Confidence 013777777653211 10 01111111111110 00 0 0146999999998777777777
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|++.|+..+...... ......+.+..+ .++..++.+|.|+++|+...+.+...+....+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWKE--------EQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeecccccccccc--------cccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 77789999999999754221000 000001122223 26678999999999999887776665533333
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.+||||+|.+.|.+.. ....+.+++.++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 2899999999998886532 11234455556778899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-CcEE-eCCCCCCCCHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVA-YPKHHKQSDVPEIYR 400 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-~~v~-~~g~~~~~el~~ly~ 400 (895)
.+.||++.+++|++.+. +...+ +++|++++. .++..++.+.+..++.. .++. +.+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999883 33344 355655432 22345666666666652 3455 467899999999999
Q ss_pred HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH------HHHHHHHHHHHhCHHH
Q 002660 401 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSVADALLKLVADKQL 474 (895)
Q Consensus 401 ~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~------~~la~ai~~ll~~~~~ 474 (895)
.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++++|. ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 475 WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 475 ~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
+++++.++++.+ ++|||+.+++++.++|++++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 999999999998 69999999999999998763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=353.71 Aligned_cols=450 Identities=14% Similarity=0.112 Sum_probs=283.6
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC-CCCCCc--ccccC-C-C
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEP--TEMLT-P-R 77 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~-~~y~~~--~e~~~-~-~ 77 (895)
||||+|+|.--. | =.-+||..-++..|.++|+++| |+|.|+++.+..-... ...... ...+. + .
T Consensus 5 ~~~il~v~~E~~----p-----~~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----P-----FVRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----h-----hcccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 489999995553 1 2689999999999999999999 9999999976431100 000000 00000 0 0
Q ss_pred CCCccccc-CC--CCCCeEEEecCCCCCCcccccccCC-------CChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcE
Q 002660 78 NSDDFMDD-MG--ESSGAYIIRIPFGPKDKYIAKELLW-------PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVA 147 (895)
Q Consensus 78 ~~~~~~~~-~~--~~~gv~i~~i~~~~~~~~~~~~~~~-------~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDv 147 (895)
........ .. ...++.++.+... .++.+..+. +|.+.+.+ +..+-......+.+ ..++|||
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~r-f~~f~~a~l~~~~~-----~~~~pDi 144 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEK-VIFFNVGVLETLQR-----LGWKPDI 144 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHH-HHHHHHHHHHHHHh-----cCCCCCE
Confidence 00000000 00 0113444443321 122222111 11111111 11111111111111 1267999
Q ss_pred EEeccccchhHHHHHhccC-------CCCEEEEeCCCchhhHHH--HHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 148 IHGHYADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLEQ--LLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 148 Vh~h~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
||+|+|.+++++.++++.. ++|+|+|+|++..+.... .+.. .++.............+..++.++..||.
T Consensus 145 iH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 145 IHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 9999999999888886543 799999999975432100 0000 01111111111111123335668999999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~ 297 (895)
|+++|+...+++.... .+.-.+...|+.+ ..++.+||||||++.|.|..... ..+.+...... ..
T Consensus 224 VitVS~~~a~ei~~~~-~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~ 289 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-EEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKL 289 (489)
T ss_pred ceeeCHHHHHHhCcCC-CCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHH
Confidence 9999998888764310 0000112222211 23899999999999998754211 00001000000 00
Q ss_pred CchhHHhhhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHH
Q 002660 298 PPIWSEIMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
......+++++.+ ++.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+|+. .+..++.+++
T Consensus 290 ~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~ 357 (489)
T PRK14098 290 ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQL-VICGSGDK---------EYEKRFQDFA 357 (489)
T ss_pred HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEE-EEEeCCCH---------HHHHHHHHHH
Confidence 0112233445544 467899999999999999999999999863 23333 47788752 2346677777
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc----CCCeE
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV----LDNGL 451 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~----~~~g~ 451 (895)
++++ ++|.|.+.++.+++..+|+.| |++|+||..|+||++.+|||+||+|+|+++.||..|.+.+ +.+|+
T Consensus 358 ~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 358 EEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 7763 689999999888899999999 9999999999999999999999999999999999998864 67999
Q ss_pred EeCCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 452 LVDPHDQQSVADALLKLV---ADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll---~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
++++.|+++++++|.+++ ++++.++++++++++ +.|||+..+++|+++|+++++
T Consensus 432 l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHhc
Confidence 999999999999999875 588888887766532 699999999999999998753
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=336.65 Aligned_cols=366 Identities=21% Similarity=0.291 Sum_probs=265.6
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++++ + |..||.++++.+|+++|+++| |+|+|+|..... .. ..
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~~-~~------~~------------ 45 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSRPF-RL------DE------------ 45 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCCCc-ch------hh------------
Confidence 7999997 2 567999999999999999999 999999874210 00 00
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..+++.+..++.... +......+.......+.+. +.+ .+||+||+|++........++
T Consensus 46 ----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~-------i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 46 ----YSPNIFFHEVEVPQY----PLFQYPPYDLALASKIAEV-------AKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred ----hccCeEEEEeccccc----chhhcchhHHHHHHHHHHH-------Hhc-------CCccEEeecccCCccHHHHHH
Confidence 012444444332211 0000001111111112221 222 689999999864333222222
Q ss_pred ----ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 164 ----GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 164 ----~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+..++|+|++.|+...... +. .. ..+. .++..++.+|.|++.|+...+.+.+.+.
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~------~~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 162 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ------DP---SFQP--ATRFSIEKSDGVTAVSESLRQETYELFD---- 162 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc------cc---cchH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC----
Confidence 2248999999997633210 00 00 1111 1445788999999999987776654431
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 319 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~v 319 (895)
+..++.+||||+|...|.+.... ..+.+++..+++++++++
T Consensus 163 -------------------~~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 163 -------------------ITKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred -------------------CcCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 11289999999998777543210 122344455678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
||+.+.||++.+++|+..+.+. ....+ +++|.+++ ...+...+.++++.++|.|+|. .+++..+|
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~-~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 268 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE-VPARL-LLVGDGPE-----------RSPAERLARELGLQDDVLFLGK--QDHVEELL 268 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc-CCceE-EEEcCCcC-----------HHHHHHHHHHcCCCceEEEecC--cccHHHHH
Confidence 9999999999999999988532 22333 47788764 2456677788888889999997 46899999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++.+.+++
T Consensus 269 ~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 269 SIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred Hhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 480 QNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
.++++.+ ++|||+.+++++.++|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999997 6999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=335.39 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=226.3
Q ss_pred CCCcEEEeccccchhHHHHHhc--cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.+||+||+|++..+..+..+++ ..+.|.++|.|+...... ... ..++. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~-~~~-----------~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR-EVL-----------NHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc-hhh-----------hhhhH-----HHHHHHHhCCEEE
Confidence 6799999999877777777765 445678999997643210 000 00100 1233578999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+...+.+... ..++ +++.+||||+|.+.|.+.....
T Consensus 180 ~~S~~~~~~l~~~--g~~~---------------------~ki~vi~nGvd~~~f~~~~~~~------------------ 218 (406)
T PRK15427 180 PISDLWAGRLQKM--GCPP---------------------EKIAVSRMGVDMTRFSPRPVKA------------------ 218 (406)
T ss_pred ECCHHHHHHHHHc--CCCH---------------------HHEEEcCCCCCHHHcCCCcccc------------------
Confidence 9999776665332 1222 3899999999999886532110
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
..+...|+++||+.+.||++.+++|++.+.+. .+++.+ ++|+|+. ..++.+++++++
T Consensus 219 ---------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 219 ---------PATPLEIISVARLTEKKGLHVAIEACRQLKEQ--GVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred ---------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh--CCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 13456799999999999999999999998643 345554 7898863 366778899999
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
+.++|.|+|+++.+++.++|+.| |++|+||.. ||+|++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 454 DPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
+|+|+++++++|.++++ +++.++++++++++.+ ++|||+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 6999999999999999753
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=329.58 Aligned_cols=357 Identities=20% Similarity=0.229 Sum_probs=260.8
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.||+++++.+|+++|.++| +++.|++....+ . +.... ...|+++++++..+..
T Consensus 12 ~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~~~----------------~~~~i~~~~~~~~~~~--- 65 (374)
T TIGR03088 12 DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRKRI----------------QRPDVAFYALHKQPGK--- 65 (374)
T ss_pred CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHHHH----------------HhcCceEEEeCCCCCC---
Confidence 46899999999999999998 999998753211 1 11000 0137788877643220
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCE-EEEeCCCchhhHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 185 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~-v~t~H~~~~~~~~~~ 185 (895)
. + .+...+.+.+.+ .+|||||+|... ...+..+++..++|. +++.|+.......
T Consensus 66 ----~---~-~~~~~l~~~l~~--------------~~~Divh~~~~~-~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-- 120 (374)
T TIGR03088 66 ----D---V-AVYPQLYRLLRQ--------------LRPDIVHTRNLA-ALEAQLPAALAGVPARIHGEHGRDVFDLD-- 120 (374)
T ss_pred ----C---h-HHHHHHHHHHHH--------------hCCCEEEEcchh-HHHHHHHHHhcCCCeEEEeecCcccccch--
Confidence 0 1 122223333333 689999999763 333445555667775 5566654221100
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
+ ....+.+. ++...+.+|.++++|+...+.+...+. .+..++.+
T Consensus 121 ---~------~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~~----------------------~~~~~~~v 164 (374)
T TIGR03088 121 ---G------SNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPVK----------------------VPPAKIHQ 164 (374)
T ss_pred ---h------hHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhcC----------------------CChhhEEE
Confidence 0 00011122 233556789999999977766544332 22238999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCC-
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLREL- 344 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~- 344 (895)
||||+|.+.|.+..... ...........++++|+++||+.+.||++.+++|+..+.+..+.
T Consensus 165 i~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~ 226 (374)
T TIGR03088 165 IYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEG 226 (374)
T ss_pred eccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCccc
Confidence 99999998886532110 01111222345678999999999999999999999988654332
Q ss_pred -CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHH
Q 002660 345 -ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 422 (895)
Q Consensus 345 -~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~ 422 (895)
+++.+ ++|+|+. ..++...++.+++..++.|+|. .+++..+|+.| |++|+||..||||+++
T Consensus 227 ~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~pS~~Eg~~~~~ 289 (374)
T TIGR03088 227 AERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQAL----DLFVLPSLAEGISNTI 289 (374)
T ss_pred ccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHhc----CEEEeccccccCchHH
Confidence 25554 7788763 2556677888899889999996 67999999999 9999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 423 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 423 ~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
+|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+..++.++++.+ ++|||+.++++|.++
T Consensus 290 lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~ 369 (374)
T TIGR03088 290 LEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGL 369 (374)
T ss_pred HHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred HHcc
Q 002660 502 IAGC 505 (895)
Q Consensus 502 ~~~~ 505 (895)
|+++
T Consensus 370 y~~~ 373 (374)
T TIGR03088 370 YDQL 373 (374)
T ss_pred HHHh
Confidence 9876
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=343.73 Aligned_cols=442 Identities=19% Similarity=0.150 Sum_probs=277.9
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC-CCCCCccccc---CCCCCC
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEPTEML---TPRNSD 80 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~-~~y~~~~e~~---~~~~~~ 80 (895)
||+|+|.-. +...-+||...++..|+++|+++| |+|+|+++.+..-... .......... ......
T Consensus 1 ~Il~v~~E~---------~p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEV---------APFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEccc---------cccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 689998443 322469999999999999999999 9999999876431110 0000000000 000000
Q ss_pred cccccCCCCCCeEEEecCCCCCC--cccccccCCCCh---HHH---HHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKD--KYIAKELLWPHI---PEF---VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY 152 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~--~~~~~~~~~~~l---~~f---~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~ 152 (895)
...-.....+|+.++++...... ..+.......+. .+| ...++..+.. + ..+|||||+|.
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~----~--------~~~pDviH~hd 137 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR----L--------GWKPDIIHCHD 137 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh----c--------CCCCcEEEECc
Confidence 00000111357888887653210 000000011111 111 1122222211 1 26799999999
Q ss_pred ccchhHHHHHhcc------CCCCEEEEeCCCchhhHHH---HHHHhhcc-HHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 153 ADAGDSAALLSGA------LNVPMLFTGHSLGRDKLEQ---LLKQARLS-RDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 153 ~~~~~~~~~~~~~------~~ip~v~t~H~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
|.+++++..+... .++|+|+|+|++....... +...+... .......+.+...+..++.++..||.|+++
T Consensus 138 ~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~v 217 (476)
T cd03791 138 WHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTV 217 (476)
T ss_pred hHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeec
Confidence 9888888777765 3899999999986533110 00000000 000000001112233467789999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCchh
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA-SPDPPIW 301 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~ 301 (895)
|+...++....+... .+...+ ..+..++.+||||||.+.|.|........ .+..... .......
T Consensus 218 S~~~~~~i~~~~~~~--gl~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~~--~~~~~~~~~~~~~k~ 282 (476)
T cd03791 218 SPTYAREILTPEFGE--GLDGLL-----------RARAGKLSGILNGIDYDVWNPATDPHLPA--NYSADDLEGKAENKA 282 (476)
T ss_pred CHhHHHHhCCCCCCc--chHHHH-----------HhccCCeEEEeCCCcCcccCccccchhhh--cCCccccccHHHHHH
Confidence 998777654321100 000000 11224899999999999998754221000 0000000 0011112
Q ss_pred HHhhhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 302 SEIMRFFT--NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 302 ~~~~~~~~--~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
..+++++. .++.++|+++||+.+.||++.+++|+..+.+ ...++ +++|+++. .+...+..+..++
T Consensus 283 ~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~~~~~~~~~- 349 (476)
T cd03791 283 ALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LGGQL-VILGSGDP---------EYEEALRELAARY- 349 (476)
T ss_pred HHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cCcEE-EEEecCCH---------HHHHHHHHHHHhC-
Confidence 23444554 3678999999999999999999999999863 22333 47787742 2345555666655
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCC------CeEEe
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD------NGLLV 453 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~------~g~lv 453 (895)
.+++.|.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+++.||..|++.++. +|+++
T Consensus 350 -~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~ 424 (476)
T cd03791 350 -PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF 424 (476)
T ss_pred -CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe
Confidence 4677776666666778999999 999999999999999999999999999999999999999887 99999
Q ss_pred CCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 454 DPHDQQSVADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~---~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+|.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|++
T Consensus 425 ~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 425 EGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYRS 476 (476)
T ss_pred CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHhC
Confidence 99999999999999886 66777777776654 479999999999999863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=325.07 Aligned_cols=373 Identities=17% Similarity=0.210 Sum_probs=265.5
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
|+- ||+|++.--+ + .+ +.-.||+|+++.++++.|+ ++|+|+|..... |...+ .
T Consensus 1 ~~~-~~~~~~~~~~----~--~p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~~------~~~~~-~------- 53 (380)
T PRK15484 1 MID-KIIFTVTPIF----S--IP-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNPG------YPEYT-K------- 53 (380)
T ss_pred CCc-eEEEEeccCC----C--CC-CccccHHHHHHHHhhhhcc-----CCeeEEEecCCC------CCchh-h-------
Confidence 774 9999885554 2 22 2347999999999999993 589999986421 11110 0
Q ss_pred cccccCCCCCCeEEEecCCCCCCcccccccCCCCh--HHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHI--PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 158 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l--~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~ 158 (895)
..+|+.++++++... +......|..+ ..+...++..+... ...++||||+|... .+.
T Consensus 54 -------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vi~v~~~~-~~~ 112 (380)
T PRK15484 54 -------VNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHKF-----------TITKDSVIVIHNSM-KLY 112 (380)
T ss_pred -------ccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHhc-----------CCCCCcEEEEeCcH-HhH
Confidence 124677777755321 11100111111 12223232222110 12569999999853 333
Q ss_pred HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 159 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 159 ~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
.....+..+.|+|++.|+.+... .+..++.|+++|+...+.+...++
T Consensus 113 ~~~~~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~--- 159 (380)
T PRK15484 113 RQIRERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP--- 159 (380)
T ss_pred HHHHhhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC---
Confidence 44445556789999999753211 234678999999877665433221
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
..++.+||||+|.+.|.+... .....+++..+++++|+|
T Consensus 160 ---------------------~~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~ 198 (380)
T PRK15484 160 ---------------------NADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLY 198 (380)
T ss_pred ---------------------CCCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEE
Confidence 127999999999888764320 012234445567789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 002660 319 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 397 (895)
Q Consensus 319 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ 397 (895)
+||+.+.||++.+++|+..+.+. .+++.+ ++|+++.... .+...+..++.+++..++ .++.|.|+++.+++..
T Consensus 199 ~Grl~~~Kg~~~Li~A~~~l~~~--~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~ 272 (380)
T PRK15484 199 AGRISPDKGILLLMQAFEKLATA--HSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHN 272 (380)
T ss_pred eccCccccCHHHHHHHHHHHHHh--CCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHH
Confidence 99999999999999999998643 345554 7787754211 122345667777777665 5799999999999999
Q ss_pred HHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeE-EeCCCCHHHHHHHHHHHHhCHHHH
Q 002660 398 IYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSVADALLKLVADKQLW 475 (895)
Q Consensus 398 ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~-lv~p~d~~~la~ai~~ll~~~~~~ 475 (895)
+|+.| |++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++.
T Consensus 273 ~~~~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~- 347 (380)
T PRK15484 273 YYPLA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL- 347 (380)
T ss_pred HHHhC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-
Confidence 99999 99999997 5999999999999999999999999999999999998 56899999999999999999985
Q ss_pred HHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 476 ARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 476 ~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
.++++++++.+ ++|||+.++++|++.|++..
T Consensus 348 ~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 348 TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 77999999988 69999999999999998653
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=329.60 Aligned_cols=379 Identities=18% Similarity=0.172 Sum_probs=250.1
Q ss_pred HHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccCCCC
Q 002660 35 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 114 (895)
Q Consensus 35 v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~ 114 (895)
..+||++|+++| |+|+++|..... .. ..|+++++++..+.. .+ ..+++
T Consensus 13 ~~~la~~L~~~G--~~v~~~~~~~~~-~~-------------------------~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQG--HEVVFLTEPNAA-PP-------------------------PGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHCC--CEEEEEecCCCC-CC-------------------------CCCeeEEEecCCCCC---CC-CCCcc
Confidence 457999999999 999999986321 10 016889988865431 11 35566
Q ss_pred hHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccH
Q 002660 115 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSR 193 (895)
Q Consensus 115 l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~ 193 (895)
...+...+.+.... .+.+.... .++.+|||||+|.... .+..+.+. .++|+|.+.|-+................
T Consensus 61 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 135 (396)
T cd03818 61 LREFEEAVLRGQAV-ARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPP 135 (396)
T ss_pred chhHHHHHHHHHHH-HHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCC
Confidence 66665544332111 11111110 1247899999997422 12223333 3688887665322110000000000000
Q ss_pred HHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCC
Q 002660 194 DEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFH 273 (895)
Q Consensus 194 ~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~ 273 (895)
.. ....++..+.......++.+|.||++|+...+.+...+. .++.+||||+|.+
T Consensus 136 ~~-~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~~ 189 (396)
T cd03818 136 SL-DDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDTD 189 (396)
T ss_pred ch-hHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCcccc
Confidence 00 000111111111345789999999999877665433221 2899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEe
Q 002660 274 HIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIMG 352 (895)
Q Consensus 274 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgr-l~~~Kgi~~ll~A~~~l~~~~~~~~l~livG 352 (895)
.|.+....... ........++.++|+|+|| +.+.||++.+++|+..+.+..++..+ +++|
T Consensus 190 ~f~~~~~~~~~------------------~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~l-vivG 250 (396)
T cd03818 190 RLRPDPQARLR------------------LPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARV-VIVG 250 (396)
T ss_pred ccCCCchhhhc------------------ccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEE-EEEc
Confidence 99764311100 0001112356789999998 99999999999999998644444444 3667
Q ss_pred cCC-CccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC
Q 002660 353 NRD-GIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430 (895)
Q Consensus 353 ~~~-~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~ 430 (895)
++. .+.......+++..++.+... +++ .++|.|+|+++.+++..+|+.| |++|+||..|++|++++||||||+
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAmA~G~ 325 (396)
T cd03818 251 GDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAMACGC 325 (396)
T ss_pred CCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHHHCCC
Confidence 532 221111111112233322222 222 4689999999999999999999 999999999999999999999999
Q ss_pred CEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh-cCCHHHHHHHHHH
Q 002660 431 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 500 (895)
Q Consensus 431 PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~-~~s~~~~a~~~~~ 500 (895)
|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++.++++++++++.++ +|||+.++++|++
T Consensus 326 PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 326 LVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999994 7999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=326.97 Aligned_cols=387 Identities=19% Similarity=0.200 Sum_probs=263.2
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+++.+.. ..||.++++.+||++|+++| |+|+|+|..... . ..+. +..
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~~~~---~~~--------- 50 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP--S-HCFE---ETK--------- 50 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc--h-hcch---hcc---------
Confidence 7999996332 36899999999999999999 999999974211 0 0000 000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..++.+..++. +++.. .+.....+... +......... .+ ....+||+||+|....+.......
T Consensus 51 -----~~~~~i~~~~~-----~~~~~-~~~~~~~~~~~-~~~~~~~~~~---~~--~~~~~~Dvi~~~~~~~~~~~~~~~ 113 (392)
T cd03805 51 -----DGTLPVRVRGD-----WLPRS-IFGRFHILCAY-LRMLYLALYL---LL--LPDEKYDVFIVDQVSACVPLLKLF 113 (392)
T ss_pred -----CCeeEEEEEeE-----EEcch-hhHhHHHHHHH-HHHHHHHHHH---Hh--cccCCCCEEEEcCcchHHHHHHHh
Confidence 11244433321 11110 11111111110 0110000000 00 012679999999764433322222
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhh-hhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
.+.|+|++.|... .. ... ........++ ...+ .|+..++.+|.|+++|+...+.+...++....
T Consensus 114 --~~~~~i~~~h~~~--~~---~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 114 --SPSKILFYCHFPD--QL---LAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred --cCCcEEEEEecCh--HH---hcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 2389999999432 11 100 0001111121 2233 37788999999999999877766555433211
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.+||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998886533110 01112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCccccccchHHHHHHHHHHHHh-cCCCCcEEeCCCCCCCCHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK-YDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~-~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~v~~~g~~~~~el~~ly 399 (895)
.+.||++.+++|++++.+..+ .+++.+ ++|+++... ....++.+++..++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRV---AENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCC---chhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999864320 135554 778765321 1223566788888998 8999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
+.| |++++||..|+||++++||||||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999889999976 89999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHH
Q 002660 480 QNGLKNI-HLFSWPEHCKTY 498 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~ 498 (895)
+++++.+ ++|||+.+++++
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999999 699999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=335.88 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=215.5
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEE-EeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLF-TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~-t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+|||||+|...+.+++..+++..++|+|+ +.|+......... ....++.... ......++.+++
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~~----~l~~~~~~i~Vs 464 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIYS----ELLKMRGVALSS 464 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHHH----HHHhcCCeEEEe
Confidence 689999999987778888888888999877 6676543221110 0011111111 111223456666
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.|....+.+...+ |.+..++.|||||||...|.+..... ..+
T Consensus 465 ~S~~~~~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~~~----------------~~~ 506 (694)
T PRK15179 465 NSQFAAHRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDACT----------------AMM 506 (694)
T ss_pred CcHHHHHHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCchhh----------------HHH
Confidence 6766555443332 22334899999999988886422100 000
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
... +...+.+.++|+++||+.+.||++.+|+|+..+.+.. +++. +|+|+|+. ..++.++++++++
T Consensus 507 ~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~--p~~~LvIvG~G~~-----------~~~L~~l~~~lgL 572 (694)
T PRK15179 507 AQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASH--PKVRFIMVGGGPL-----------LESVREFAQRLGM 572 (694)
T ss_pred Hhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHC--cCeEEEEEccCcc-----------hHHHHHHHHHcCC
Confidence 000 1112345678999999999999999999999886433 4454 48898764 3567788999999
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH--
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ-- 458 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~-- 458 (895)
.++|.|+|+. +++..+|+.| |++|+||.+||||++++|||+||+|||+|+.||..|+|.++.+|++++|+|.
T Consensus 573 ~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 573 GERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred CCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 9999999995 5899999999 9999999999999999999999999999999999999999999999998774
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++++|.+++.+......+++++++.+ ++|||+.++++++++|+
T Consensus 647 ~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 647 PDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677888999998 69999999999999985
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=312.35 Aligned_cols=360 Identities=19% Similarity=0.191 Sum_probs=255.9
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+|+ +|..||+++++.+|+++|+++| |+|+|+|........ .
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~-------~------------- 48 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK-------E------------- 48 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc-------c-------------
Confidence 6899988886 4788999999999999999999 999999975321110 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
....|++++++|.... .. +..+...+...+.. +.. ..++|+||...... ..+..+++
T Consensus 49 --~~~~~i~~~~~~~~~~-~~---------~~~~~~~~~~~~~~----~~~------~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 49 --TEYNGVRLIHIPAPEI-GG---------LGTIIYDILAILHA----LFV------KRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred --cccCCceEEEcCCCCc-cc---------hhhhHHHHHHHHHH----Hhc------cCCeEEEEecCccH-HHHHHHHH
Confidence 0124888888875331 00 11111111111111 000 14466666555433 33344455
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|++++.|+...... ..+. ....+.+. .|+..++.+|.|+++|+...+.+...|+.
T Consensus 106 ~~~~~~v~~~h~~~~~~~----~~~~-------~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRA----KWGR-------PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeec----cccc-------chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 569999999998643210 0000 01112222 35667899999999999877765444432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..+||||+|...+.+.. ....... ..+.+.++++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~~-~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKYG-LEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhcC-CCCCcEEEEEecccc
Confidence 238999999987765310 0111111 233457899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
.||++.+++|+..+. ....+ +++|+++.... +...+. .++..++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~---~~~~l-~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a- 268 (363)
T cd04955 205 ENNIDDLIEAFSKSN---SGKKL-VIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA- 268 (363)
T ss_pred cCCHHHHHHHHHhhc---cCceE-EEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC-
Confidence 999999999999884 23333 47888754322 222222 56778899999999999999999999
Q ss_pred cCCcEEEecCCC-CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFI-EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 404 ~~~dv~v~ps~~-Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.++
T Consensus 269 ---d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~ 341 (363)
T cd04955 269 ---ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAA 341 (363)
T ss_pred ---CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999865 7889987776 9999999999999999999999
Q ss_pred HHHh-hcCCHHHHHHHHHHHHH
Q 002660 483 LKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 483 ~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++.+ ++|||+.++++|+++|+
T Consensus 342 ~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 342 RERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998 58999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=316.87 Aligned_cols=278 Identities=27% Similarity=0.388 Sum_probs=225.2
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||+|....+..+..+++..|+|+|++.|+.......... . .. .++.... .++..++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~---~-~~-----~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL---L-RS-----RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh---c-cc-----chhHHHH--HHHHHHHhcCEEEEC
Confidence 67999999987777788888899999999999975432211000 0 00 0111222 255678999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+... ...+ .++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~~~---------------------~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GFPP---------------------EKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 2222 38999999999988865320
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
..+.+.++++|++.+.||++.+++|+..+.+. .+++.+ ++|+++. .+++..+++.+++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 23567899999999999999999999998643 344444 7787652 35677888888888
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p 455 (895)
++|.|.|.++.+++..+|+.| |++|+||. .||||++++|||+||+|||+++.|+..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 002660 456 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 500 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~ 500 (895)
.|+++++++|.+++++++.+++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998865
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=320.47 Aligned_cols=286 Identities=18% Similarity=0.218 Sum_probs=209.2
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+|||||+|.+....+ ....+..++|+|++.|+...... ...+++. +..++.+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 5799999998753222 22333348999999997543211 0111122 2346788998888
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
+...... .+. ..++ +||||||...+.... . .......
T Consensus 143 ~~~~~~~------~~~---------------------~~~~-vipngvd~~~~~~~~--~-------------~~~~~~~ 179 (372)
T cd03792 143 LPEYVPP------QVP---------------------PRKV-IIPPSIDPLSGKNRE--L-------------SPADIEY 179 (372)
T ss_pred HHHhcCC------CCC---------------------CceE-EeCCCCCCCccccCC--C-------------CHHHHHH
Confidence 7432211 111 1144 999999975321100 0 0011223
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
.+++++..+++++|+++||+.+.||++.+++|++.+.+..+...+ +++|+++..+.. ....+..+.+..++.+
T Consensus 180 ~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~------~~~~~~~~~~~~~~~~ 252 (372)
T cd03792 180 ILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE------GWIVYEEVLEYAEGDP 252 (372)
T ss_pred HHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEE-EEEeCCCCCCch------hHHHHHHHHHHhCCCC
Confidence 345566677899999999999999999999999998643344444 478887642211 1122333444566777
Q ss_pred cEEeCCCC--CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 383 QVAYPKHH--KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 383 ~v~~~g~~--~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
+|.|.|.. +.+++..+|+.| |++++||..||||++++||||||+|||+++.||..+++.++.+|++++ +.++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~ 326 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEE 326 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHH
Confidence 89998876 788999999999 999999999999999999999999999999999999999999999987 5678
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++++|.+++++++.++++++++++.+ ++|||+.++++++++|+.+
T Consensus 327 ~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 327 AAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 6999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=309.39 Aligned_cols=343 Identities=24% Similarity=0.287 Sum_probs=257.1
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.||+++++.+|+++|+++| |+|.+++...... ... ...+++++.++.....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~~~----------------~~~~~~~~~~~~~~~~--- 59 (355)
T cd03819 8 ESGGVERGTLELARALVERG--HRSLVASAGGRLV-------AEL----------------EAEGSRHIKLPFISKN--- 59 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------HHH----------------HhcCCeEEEccccccc---
Confidence 34899999999999999999 9999998642100 001 1136777776653321
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+..+ .+...+...+.+ .+||+||+|.....+.+..+++..++|+|++.|+.+....
T Consensus 60 ----~~~~~-~~~~~l~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---- 116 (355)
T cd03819 60 ----PLRIL-LNVARLRRLIRE--------------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF---- 116 (355)
T ss_pred ----hhhhH-HHHHHHHHHHHH--------------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH----
Confidence 11111 111222222222 6899999999877777777778889999999998754321
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
+ .+..++.+|.++++|+...+.+...++ .+..++.+|
T Consensus 117 ---------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i 153 (355)
T cd03819 117 ---------------R------YNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVI 153 (355)
T ss_pred ---------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEe
Confidence 0 122467899999999877766543332 222389999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...|.+..... ......++++...++.++++++||+.+.||++.+++|+..+.+. .++
T Consensus 154 ~ngi~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~~ 216 (355)
T cd03819 154 PRGVDLDRFDPGAVPP---------------ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DPD 216 (355)
T ss_pred cCCccccccCccccch---------------HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CCC
Confidence 9999998886532110 01111234444566788999999999999999999999999643 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCchHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIE 424 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~~Eg~gl~~~E 424 (895)
+.+ ++|.++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||++++|
T Consensus 217 ~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~E 283 (355)
T cd03819 217 VHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVE 283 (355)
T ss_pred eEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHH
Confidence 554 788876432 234566677888898889999999 78999999999 9999999 79999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHH
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPE 493 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~ 493 (895)
|||||+|||+++.||..|++.++.+|++++++|+++++++|..++. ++++++++++++++.+ ++|||+.
T Consensus 284 A~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 284 AQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999889999999999999999976665 8999999999999999 5999975
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=309.60 Aligned_cols=291 Identities=16% Similarity=0.108 Sum_probs=212.7
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEE-eCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFT-GHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+|||||+|...+...+...+...|+|.+++ .|+......... ....|...++ -..+...+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~---a~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQ---ALAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhh---hceeEecch-hhh
Confidence 7899999999877777777777789999664 665322211100 0011111110 001234444 445
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.+....+.+...+ |.+.+++.+||||||...|.+..... ...+
T Consensus 345 ~s~~v~~~l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r 387 (578)
T PRK15490 345 NNHCVTRHYADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSEVP---------------HKIW 387 (578)
T ss_pred ccHHHHHHHHHHh----------------------CCCHHHEEEEeCCcchhhcCccchhh---------------HHHH
Confidence 5554444332322 23334999999999999887643110 0001
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
... +...+++.++|+++||+.+.||+..+|+++..+.+.. +++. +++|+|+. ..++..+++++++
T Consensus 388 ~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~--pdirLvIVGdG~~-----------~eeLk~la~elgL 453 (578)
T PRK15490 388 QQF-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHH--PATRFVLVGDGDL-----------RAEAQKRAEQLGI 453 (578)
T ss_pred HHh-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHC--CCeEEEEEeCchh-----------HHHHHHHHHHcCC
Confidence 111 1222355679999999999999999999998875433 4555 47898863 3567788999999
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.|.|+ .+++..+|+.+ |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|+++++.|+++
T Consensus 454 ~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 454 LERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred CCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999 57999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 002660 461 VADAL---LKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 461 la~ai---~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~ 504 (895)
+++++ .++....+....+++++++.+ ++|||+.++++|.++|..
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 88887 334445555667889999999 599999999999999985
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=306.39 Aligned_cols=362 Identities=22% Similarity=0.256 Sum_probs=262.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||.+.++..|+++|+++| |+|+++|......... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 6888885553 677999999999999999999 9999999764221100 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~ 163 (895)
.....+...+.... .... ..+. ....+...+. ..+||+||++.. ..+..+..++
T Consensus 49 ----~~~~~~~~~~~~~~-~~~~--~~~~----~~~~~~~~~~--------------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 49 ----ARVVPVPSVPLPGY-PEIR--LALP----PRRRVRRLLD--------------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ----CCceeecccccCcc-cceE--eccc----chhhHHHHHH--------------hcCCCEEEEeccchhhHHHHHHH
Confidence 01222222222111 0000 0000 0111111111 167999999875 3455667778
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|++++.|+.+........ .. ... .+... .++..++.+|.++++|....+.+.....
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~-~~~---~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~-------- 164 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG-PLS---WLAWA--YLRWFHNRADRVLVPSPSLADELRARGF-------- 164 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc-hHh---HhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC--------
Confidence 88899999999987653321111 00 001 11112 2455688999999999987764332211
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.++.++|+|+|.+.|.+..... .....+. ..++++++++|++.
T Consensus 165 -----------------~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 165 -----------------RRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred -----------------CceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 2789999999998886533110 1112222 45678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+. +++. +++|.++..+. +. +..++|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999653 3444 47887764211 11 456789999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.++++++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHH
Q 002660 483 LKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 483 ~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++.+++|+|+.++++++++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 999989999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=316.38 Aligned_cols=293 Identities=21% Similarity=0.287 Sum_probs=233.9
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHH-HHHHHhhccHHHHHh-hhhhhHHHHHHHhhhcccCEE
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLE-QLLKQARLSRDEINA-TYKIMRRIEAEELSLDASEIV 219 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~l~~ad~v 219 (895)
.++|+||+|.. .+++++..+++..++|+|+|.|+.+..... .+....+ ....... ..+++..+ ++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~l--~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADW-EMSYFRRLWIRFFESL--GRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhccc-chHHHHHHHHHHHHHH--HHHHHHhCCEE
Confidence 47999999975 567888888889999999999997653321 1211110 1111111 12233333 66789999999
Q ss_pred EeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 220 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 220 i~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
+++|+...+.+.. + |.+.+++.+||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~-~----------------------g~~~~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIE-D----------------------GADPEKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHH-c----------------------CCCHHHeEEeCCCcCHHHcCCcccc------------------
Confidence 9999876655432 1 2222389999999999988754310
Q ss_pred hhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 300 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
....+.++|+++||+.+.||++.+++|++.+.+. .+++.+ |+|+++. ..++.+++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~-------~~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDE-------DPEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCc-------ChHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998643 455554 7888752 234568888999999
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc------CCCeEE
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV------LDNGLL 452 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~------~~~g~l 452 (895)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57899999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 453 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++|.|+++++++|.+++++++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 58999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=307.22 Aligned_cols=347 Identities=14% Similarity=0.121 Sum_probs=244.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~ 81 (895)
|||++++.. + +..||+++++.+++++|.++ | |+|.++++...... ...
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~~---------~~~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMDK---------AWL------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCCh---------HHH-------
Confidence 799999732 2 56799999999999999999 7 99999987432100 000
Q ss_pred ccccCCCCCCeEEE-ecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHH
Q 002660 82 FMDDMGESSGAYII-RIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAA 160 (895)
Q Consensus 82 ~~~~~~~~~gv~i~-~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~ 160 (895)
....++ .++..+. ..+.. ......+.+++++ .+||+||+|.....+++.
T Consensus 51 --------~~~~~~~~~~~~~~-~~~~~-------~~~~~~l~~~l~~--------------~~~Dii~~~~~~~~~~~~ 100 (359)
T PRK09922 51 --------KEIKYAQSFSNIKL-SFLRR-------AKHVYNFSKWLKE--------------TQPDIVICIDVISCLYAN 100 (359)
T ss_pred --------Hhcchhcccccchh-hhhcc-------cHHHHHHHHHHHh--------------cCCCEEEEcCHHHHHHHH
Confidence 011100 0111000 00000 0111222222222 789999999876666666
Q ss_pred HHhccCCCC--EEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 161 LLSGALNVP--MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 161 ~~~~~~~ip--~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
.+++..++| ++.+.|....... .+ +...+..+|.++++|+...+.+... ...
T Consensus 101 ~~~~~~~~~~~~~~~~h~~~~~~~----------------~~--------~~~~~~~~d~~i~~S~~~~~~~~~~--~~~ 154 (359)
T PRK09922 101 KARKKSGKQFKIFSWPHFSLDHKK----------------HA--------ECKKITCADYHLAISSGIKEQMMAR--GIS 154 (359)
T ss_pred HHHHHhCCCCeEEEEecCcccccc----------------hh--------hhhhhhcCCEEEEcCHHHHHHHHHc--CCC
Confidence 666666655 4666675321110 00 0011468999999998776665432 122
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
+ +++.+||||+|.+.+..... ...+++++++
T Consensus 155 ~---------------------~ki~vi~N~id~~~~~~~~~----------------------------~~~~~~~i~~ 185 (359)
T PRK09922 155 A---------------------QRISVIYNPVEIKTIIIPPP----------------------------ERDKPAVFLY 185 (359)
T ss_pred H---------------------HHEEEEcCCCCHHHccCCCc----------------------------ccCCCcEEEE
Confidence 2 38999999999765432110 0134678999
Q ss_pred EeCCC--CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC--C
Q 002660 319 LARPD--PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ--S 393 (895)
Q Consensus 319 vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~--~ 393 (895)
+||+. ..||+..+++|+..+. + ++. +++|+|++ .+++.++++.+++.++|.|+|+++. +
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 99986 4699999999999873 2 344 47898875 3556788888999999999998754 6
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
++.++|+.| |++|+||..||||++++||||||+|||+++ .||..|++.++.+|++++|+|+++++++|.++++++
T Consensus 250 ~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 250 VVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred HHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCc
Confidence 889999999 999999999999999999999999999999 899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 473 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 473 ~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
+.+. .....+.+.+|+.+...+++.++|..++.
T Consensus 326 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 326 VKYQ--HDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ccCC--HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 7541 22333344788999999999999987754
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=300.47 Aligned_cols=332 Identities=19% Similarity=0.173 Sum_probs=234.3
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++|+.... + .+ +|..||+++++.+|+++|+++| |+|++++.......
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 79999985443 0 01 3688999999999999999999 99999997532110
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
........... .... .. ...........+ .+.+. ..+||+||+|.+..... ++
T Consensus 51 --------~~~~~~~~~~~--~~~~---~~-~~~~~~~~~~~~---~~~~~-------~~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 51 --------APLVPVVPEPL--RLDA---PG-RDRAEAEALALA---ERALA-------AGDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred --------cceeeccCCCc--cccc---ch-hhHhhHHHHHHH---HHHHh-------cCCCCEEEecCcccchh---hh
Confidence 00011110000 0000 00 000001111111 11111 26799999999855544 56
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|++.|+........ ........+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~------------------------~~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK------------------------LYYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch------------------------HHHhhCcCCeEEEecHHHHhhcccc----------
Confidence 778999999999875433100 0123567788889888655432111
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.++.+||||+|.+.|.+. ..++..++++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 289999999999888652 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcC-CCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD-LYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~-l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++... ..++ +++|.++..+ .+........ +.++|.|+|+++.+++..+|+.|
T Consensus 182 ~~Kg~~~li~~~~~~-----~~~l-~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 182 PEKGPHLAIRAARRA-----GIPL-KLAGPVSDPD-----------YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred cccCHHHHHHHHHhc-----CCeE-EEEeCCCCHH-----------HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 999999999998754 2334 4788876422 2222222222 56789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.++++.+. .+
T Consensus 245 ----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~------~~ 312 (335)
T cd03802 245 ----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDR------AA 312 (335)
T ss_pred ----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHH------HH
Confidence 99999997 59999999999999999999999999999999889999985 9999999999876432 34
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHH
Q 002660 482 GLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+++.+ ++|||+..+++|+++|+
T Consensus 313 ~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 313 CRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 55666 69999999999999874
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=300.89 Aligned_cols=353 Identities=21% Similarity=0.249 Sum_probs=255.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.... |+.||.++++.+|+++|.++| |+|+|++........ ..
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~~------------ 48 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------DE------------ 48 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------hh------------
Confidence 6888885553 779999999999999999999 999999875322111 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
...+..+.+++.... . ..+.....+ ...+. + ...+||+||+|.............
T Consensus 49 ---~~~~~~~~~~~~~~~-----~-~~~~~~~~~----~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 49 ---ERNGHRVIRAPSLLN-----V-ASTPFSPSF----FKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred ---hccCceEEEeecccc-----c-ccccccHHH----HHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 012455666553211 0 011111111 11111 0 126799999998643322222333
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|.+++.|+..... .. .+++...+ ++..++.+|.|+++|+...+.....+.. .
T Consensus 104 ~~~~~~i~~~h~~~~~~-------~~--------~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~~~~~-~------ 159 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQ-------KL--------LLKLYRPL--QRRFLRRADAIVATSPNYAETSPVLRRF-R------ 159 (357)
T ss_pred ccCceEEEEEcChhhcc-------ch--------hhhhhhHH--HHHHHHhcCEEEeCcHHHHHHHHHhcCC-c------
Confidence 36899999999743211 00 11112222 4557899999999998776654333211 1
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
.++.++|||+|...+.+..... ........+.++|+++||+.+
T Consensus 160 ----------------~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 160 ----------------DKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ----------------cceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 2899999999998876432100 011122456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.||++.+++|++++. ...+ +++|+++. ...+.+.+.+.++.++|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~----~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a-- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP----DAPL-VIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC-- 264 (357)
T ss_pred ccCHHHHHHHHHhcc----CcEE-EEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC--
Confidence 999999999999884 2333 47787753 34566677788899999999999999999999999
Q ss_pred CCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc-CCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 405 TKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 405 ~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~-~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||. .|+||++++|||+||+|||+++.|+..+.+.+ +.+|++++++|+++++++|.+++++++.++.++++
T Consensus 265 --d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~ 342 (357)
T cd03795 265 --DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEA 342 (357)
T ss_pred --CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 99999986 69999999999999999999999999998886 88999999999999999999999999999999999
Q ss_pred HHHHh-hcCCHHHHH
Q 002660 482 GLKNI-HLFSWPEHC 495 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a 495 (895)
+++.+ ++|||+.++
T Consensus 343 ~~~~~~~~~s~~~~~ 357 (357)
T cd03795 343 ARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHhcchHhhC
Confidence 99999 699998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=300.07 Aligned_cols=381 Identities=15% Similarity=0.070 Sum_probs=243.8
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
.|||++++--++ |..+|+...+..++.+|+++|. |+|+||++..........|+.....-.+ .+.
T Consensus 4 ~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~---~~~ 68 (462)
T PLN02846 4 KQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSP---SEQ 68 (462)
T ss_pred CCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCc---hhh
Confidence 389999996665 8999999999999999999992 3999999864321111111100000000 000
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChH-HHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhH--
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIP-EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDS-- 158 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~-~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~-- 158 (895)
...+.+..+-++.+++.-+. ...+...-+++.. -....+.+.+.. .+|||||+|.+ ..++.
T Consensus 69 e~~~~~~~~~~v~r~~s~~~-p~yp~r~~~~~r~~~~~~~i~~~l~~--------------~~pDVIHv~tP~~LG~~~~ 133 (462)
T PLN02846 69 EAYVRQWLEERISFLPKFSI-KFYPGKFSTDKRSILPVGDISETIPD--------------EEADIAVLEEPEHLTWYHH 133 (462)
T ss_pred hhhhhhhccCeEEEeccccc-ccCcccccccccccCChHHHHHHHHh--------------cCCCEEEEcCchhhhhHHH
Confidence 00010111335556554433 1111110010000 011223333332 78999999997 45665
Q ss_pred HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhh-cccCEEEeCChHHHHHHHhhhcCC
Q 002660 159 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEIVITSTRQEIEEQWRLYDGF 237 (895)
Q Consensus 159 ~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~ad~vi~~s~~~~~~~~~~~~~~ 237 (895)
+..+++++++ +|.++|.....+.... ..|... ....++..++ +. .++|.|+++|....+ +.+
T Consensus 134 g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~----~~l~~~~~~~-----~~r~~~d~vi~pS~~~~~-l~~----- 196 (462)
T PLN02846 134 GKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVK----AFLLKYINSW-----VVDIYCHKVIRLSAATQD-YPR----- 196 (462)
T ss_pred HHHHHhcCCc-EEEEECCChHHHHHHh-ccchHH----HHHHHHHHHH-----HHHHhcCEEEccCHHHHH-Hhh-----
Confidence 6677777755 8889999654432221 111111 1111112221 11 248999999974322 211
Q ss_pred ChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCC--CcE
Q 002660 238 DPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPR--KPV 315 (895)
Q Consensus 238 ~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 315 (895)
.+.+.++|||.+.|.+..... .... ...+ .+.
T Consensus 197 ------------------------~~i~~v~GVd~~~f~~~~~~~---------------------~~~~-~~~~~~~~~ 230 (462)
T PLN02846 197 ------------------------SIICNVHGVNPKFLEIGKLKL---------------------EQQK-NGEQAFTKG 230 (462)
T ss_pred ------------------------CEEecCceechhhcCCCcccH---------------------hhhc-CCCCCcceE
Confidence 445567999999887643110 0011 1222 357
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCC
Q 002660 316 ILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSD 394 (895)
Q Consensus 316 il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~e 394 (895)
++|+||+.++||++.+|+|+..+.+.. +++. +|+|+|++ ..++.+++.++++..++ |.|. .+
T Consensus 231 ~l~vGRL~~eK~~~~Li~a~~~l~~~~--~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~---~~ 293 (462)
T PLN02846 231 AYYIGKMVWSKGYKELLKLLHKHQKEL--SGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR---DH 293 (462)
T ss_pred EEEEecCcccCCHHHHHHHHHHHHhhC--CCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC---CC
Confidence 999999999999999999999886433 3444 48899986 35566788888876444 7776 34
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHH
Q 002660 395 VPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 474 (895)
Q Consensus 395 l~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 474 (895)
..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.++++++.
T Consensus 294 ~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~~~- 365 (462)
T PLN02846 294 ADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAEEP- 365 (462)
T ss_pred HHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHccCc-
Confidence 45899999 999999999999999999999999999999997 59999999999884 89999999999998532
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 475 WARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 475 ~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
.+++..+ .+.|||+..++++++.++--
T Consensus 366 -~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 2222222 25999999999999999843
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=287.11 Aligned_cols=365 Identities=17% Similarity=0.230 Sum_probs=264.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
++|+|+|.|.+ |.+||++.++..|++.|-+.| |.|.++|-.+.+. . +...
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-~------giry---------- 50 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-V------GIRY---------- 50 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-c------ceee----------
Confidence 47999999999 999999999999999999999 9999999876432 1 1211
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc--hhHHHH
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA--GDSAAL 161 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~--~~~~~~ 161 (895)
.++|++|+.+|.... ......+.+......+...+.+ ++..+||.|..++ +--+..
T Consensus 51 ----lt~glkVyylp~~v~----~n~tT~ptv~~~~Pllr~i~lr--------------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 51 ----LTNGLKVYYLPAVVG----YNQTTFPTVFSDFPLLRPILLR--------------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred ----ecCCceEEEEeeeee----ecccchhhhhccCcccchhhhh--------------hceEEEecCChHHHHHHHHHH
Confidence 245788888886322 1222222222221111111111 5799999998743 334556
Q ss_pred HhccCCCCEEEEeCCCchhh-HHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChH
Q 002660 162 LSGALNVPMLFTGHSLGRDK-LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240 (895)
Q Consensus 162 ~~~~~~ip~v~t~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~ 240 (895)
.++.+|.++|+|-|+++-.. .... +... .-...+...|++||+|..-.+... .....
T Consensus 109 hartMGlktVfTdHSlfGfad~~si----------------~~n~--ll~~sL~~id~~IcVshtskentv-lr~~L--- 166 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFADIGSI----------------LTNK--LLPLSLANIDRIICVSHTSKENTV-LRGAL--- 166 (426)
T ss_pred HHHhcCceEEEeccccccccchhhh----------------hhcc--eeeeeecCCCcEEEEeecCCCceE-EEecc---
Confidence 78889999999999974311 1000 0111 123468899999998754322110 11112
Q ss_pred HHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEe
Q 002660 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALA 320 (895)
Q Consensus 241 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vg 320 (895)
..+++.+|||.++++.|.|..... ...+...|+.++
T Consensus 167 ------------------~p~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~s 202 (426)
T KOG1111|consen 167 ------------------APAKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVAS 202 (426)
T ss_pred ------------------CHhHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEe
Confidence 233999999999999999854221 013347899999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 321 RPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 321 rl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
|+.++||++++++++.++.++ .|++. +|+|+||... .+++..+++.++++|.++|.++.+++.+.|
T Consensus 203 RLvyrKGiDll~~iIp~vc~~--~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl 269 (426)
T KOG1111|consen 203 RLVYRKGIDLLLEIIPSVCDK--HPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVL 269 (426)
T ss_pred eeeeccchHHHHHHHHHHHhc--CCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHH
Confidence 999999999999999999744 45555 4789998643 345677888999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
..- |||++||+.|.|+++++||++||+|||+|.+||..|++.+. -+.....+++++++++.++++.-... -
T Consensus 270 ~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p 340 (426)
T KOG1111|consen 270 VRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---P 340 (426)
T ss_pred hcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---c
Confidence 999 99999999999999999999999999999999999998653 34355567889999998888632211 1
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 480 QNGLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
....+.+ +.|+|+..|++-...|.++...
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t 370 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATT 370 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 2233455 4899999999999999988764
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=305.74 Aligned_cols=375 Identities=15% Similarity=0.115 Sum_probs=246.8
Q ss_pred CchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccccc
Q 002660 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 108 (895)
Q Consensus 29 GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~ 108 (895)
+|.+..+..+|++|+++| |+|+|+|.....+. .+ .....|+.++.++..+. ...
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~~-------------~~~~~~v~~~~~~~~~~--~~~- 67 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------DE-------------ILSNPNITIHPLPPPPQ--RLN- 67 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------HH-------------HhcCCCEEEEECCCCcc--ccc-
Confidence 466778899999999999 99999987532111 00 01124899998876541 000
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 109 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 109 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
..+.+..+...++..+..+.+.+.. ..+||+||+|... ...++..+++..++|+|++.|+.+....
T Consensus 68 --~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 68 --KLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 0111111111111111121111111 1579999998742 2344555677789999999999753221
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..+..... ...++..++ |+..++.+|.|+++|+...+.+.+ + |.+..++.+
T Consensus 137 -~~~~~~~~---~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------------------~~~~~ki~v 187 (415)
T cd03816 137 -ALKLGENH---PLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------------------NNWKIRATV 187 (415)
T ss_pred -hcccCCCC---HHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h----------------------hccCCCeee
Confidence 11110000 112233443 777889999999999987776543 2 122349999
Q ss_pred eCCCCCCCCCCCCCCCCCCC-CCCC--CCCCCCCCCchhHHhhhh-cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 002660 266 IPPGMEFHHIVPQDGDMDGE-TEGN--EDNPASPDPPIWSEIMRF-FTNPRKPVILALARPDPKKNITTLVKAFGECRPL 341 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~ 341 (895)
||||. ...|.|........ .... ... .. ....... ...++..+++++||+.+.||++.+|+|+..+.+.
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~ 260 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHELFLKLAKTFL-----TR-ELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKS 260 (415)
T ss_pred cCCCC-HHHceeCcHHHHHHHHHhcccccc-----cc-ccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHh
Confidence 99994 45665532110000 0000 000 00 0000000 1123456788999999999999999999998532
Q ss_pred ----cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC---
Q 002660 342 ----RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA--- 413 (895)
Q Consensus 342 ----~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps--- 413 (895)
...+++.+ ++|+|+. ..++.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+
T Consensus 261 ~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~ 325 (415)
T cd03816 261 AATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSS 325 (415)
T ss_pred hcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEccccc
Confidence 12345664 7898874 35677888889987667777899999999999999 9998753
Q ss_pred CCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhhcCC
Q 002660 414 FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD---KQLWARCRQNGLKNIHLFS 490 (895)
Q Consensus 414 ~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~~~~s 490 (895)
..|++|++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.+++++ ++.+++|+.++++.. .++
T Consensus 326 ~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~ 402 (415)
T cd03816 326 SGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELR 402 (415)
T ss_pred cccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcC
Confidence 35789999999999999999999999999999999999994 899999999999999 899999999998887 444
Q ss_pred HHHH
Q 002660 491 WPEH 494 (895)
Q Consensus 491 ~~~~ 494 (895)
|.+-
T Consensus 403 ~~~~ 406 (415)
T cd03816 403 WDEN 406 (415)
T ss_pred HHHH
Confidence 4443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=301.01 Aligned_cols=371 Identities=22% Similarity=0.240 Sum_probs=258.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. |..||.++++.+|+++|+++| |+|++++......... .. .
T Consensus 1 kIl~i~~~~~-----------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~------~~-~---------- 50 (375)
T cd03821 1 KILHVIPSFD-----------PKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDPLL------VA-L---------- 50 (375)
T ss_pred CeEEEcCCCC-----------cccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCccch------hh-c----------
Confidence 6888875442 789999999999999999999 9999998754221100 00 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~~~~ 162 (895)
.......... .. ..... ..+.. +......+... ...+||+||+|.. .....+...
T Consensus 51 -----~~~~~~~~~~-~~-~~~~~-~~~~~---~~~~~~~~~~~------------~~~~~dii~~~~~~~~~~~~~~~~ 107 (375)
T cd03821 51 -----NGVPVKLFSI-NV-AYGLN-LARYL---FPPSLLAWLRL------------NIREADIVHVHGLWSYPSLAAARA 107 (375)
T ss_pred -----cCceeeeccc-ch-hhhhh-hhhhc---cChhHHHHHHH------------hCCCCCEEEEecccchHHHHHHHH
Confidence 0100000000 00 00000 00000 00001111111 0157999999973 345555666
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|++++.|+........ .. ...+.......++..+..++.+++++..........+
T Consensus 108 ~~~~~~~~i~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~-------- 168 (375)
T cd03821 108 ARKYGIPYVVSPHGMLDPWALP---HK--------ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG-------- 168 (375)
T ss_pred HHHhCCCEEEEccccccccccc---cc--------hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC--------
Confidence 7778999999999875433110 00 0011122223356678899999999976655543322
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
+..++.++|||+|.+.|.+..... .+.......++++++++||+
T Consensus 169 ----------------~~~~~~vi~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 212 (375)
T cd03821 169 ----------------LKAPIAVIPNGVDIPPFAALPSRG--------------------RRRKFPILPDKRIILFLGRL 212 (375)
T ss_pred ----------------CcccEEEcCCCcChhccCcchhhh--------------------hhhhccCCCCCcEEEEEeCc
Confidence 112899999999998886532110 02223345678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
.+.||++.+++|+..+.+..+...+ +++|.++.. ....+...+.++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~~~~~---------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 282 (375)
T cd03821 213 HPKKGLDLLIEAFAKLAERFPDWHL-VIAGPDEGG---------YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADA 282 (375)
T ss_pred chhcCHHHHHHHHHHhhhhcCCeEE-EEECCCCcc---------hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhC
Confidence 9999999999999999743333333 477876432 123444556888999999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++|+||..|+||++++|||+||+|||+++.||..+++.+ ..|+++++ +.++++++|.+++++++.++.+++++
T Consensus 283 ----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~ 356 (375)
T cd03821 283 ----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENG 356 (375)
T ss_pred ----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 78888764 56999999999999999999999999
Q ss_pred HHHh-hcCCHHHHHHHHH
Q 002660 483 LKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 483 ~~~~-~~~s~~~~a~~~~ 499 (895)
++.+ ++|||+..+++++
T Consensus 357 ~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 357 RALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 9997 7999999999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=290.24 Aligned_cols=245 Identities=22% Similarity=0.381 Sum_probs=181.2
Q ss_pred CeEEEEEecCCCCcchhHHHHHHHHHHH-hhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 612 KHIFVISVDCDSTTGLLDATKKICEAVE-KERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 612 ~kli~~DiDGTL~~~~~~~~~~~l~~l~-~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
++||++|+||||.......+.++.+.++ .. .+++.|+++|||++.++.+++++.+++ .||++||++|+.||+..
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~--~~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLEQQA--RPEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHHHHH--CCGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHHHhh--CCCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEcC-
Confidence 6899999999997333344444444444 22 258999999999999999999999984 58999999999999953
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHH
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 770 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 770 (895)
.+..+..|..++...|..+.+.+++..+++...+.. ..+..+|++|++........++++++.
T Consensus 77 -----~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~------------~~q~~~k~sy~~~~~~~~~~~~~i~~~ 139 (247)
T PF05116_consen 77 -----NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPE------------SEQRPFKISYYVDPDDSADILEEIRAR 139 (247)
T ss_dssp -----TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGC------------CCGCCTCECEEEETTSHCHHHHHHHHH
T ss_pred -----CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCc------------cccCCeeEEEEEecccchhHHHHHHHH
Confidence 566788999999999999889988888876544432 346678999998655444447889999
Q ss_pred HHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccc
Q 002660 771 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 850 (895)
Q Consensus 771 l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~ 850 (895)
+...+..+++++|++. ++||+|+++|||.||++|+++|+++++++++ +||+.| | ++||..+..||+||||.++...
T Consensus 140 l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e~~~ 215 (247)
T PF05116_consen 140 LRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPELLS 215 (247)
T ss_dssp HHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HHHHH
T ss_pred HHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHHHHH
Confidence 9988999999999885 9999999999999999999999999999999 788888 8 9999999999999999944100
Q ss_pred cccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 851 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 851 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
...... ....-.|++.....+||.+||+||||
T Consensus 216 ~~~~~~----------~~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 216 WLLEKL----------RQQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp HHHHCC-----------TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred HHHHhc----------ccCCceEecCCCCcHHHHHHHHHcCC
Confidence 000000 01223466788899999999999996
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=297.38 Aligned_cols=371 Identities=22% Similarity=0.282 Sum_probs=264.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++... .|+.||.+.++.+++++|+++| |+|+++|.......... .
T Consensus 1 kil~~~~~~-----------~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~-------~----------- 49 (374)
T cd03817 1 KIGIFTDTY-----------LPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE-------E----------- 49 (374)
T ss_pred CeeEeehhc-----------cCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc-------c-----------
Confidence 688887443 3889999999999999999999 99999987643211100 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~ 163 (895)
..+......... ...+ ..+.. .+...+...+. ..+||+||+|.. ..+..+..++
T Consensus 50 ----~~~~~~~~~~~~----~~~~-~~~~~--~~~~~~~~~~~--------------~~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 50 ----VVVVRPFRVPTF----KYPD-FRLPL--PIPRALIIILK--------------ELGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ----cccccccccccc----hhhh-hhccc--cHHHHHHHHHh--------------hcCCCEEEECCchhhhhHHHHHH
Confidence 001111111000 0000 01100 11111111111 167999999975 4556677788
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|++++.|+.+....... ....... . .... ...++..++.+|.++++|+...+.+....
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~-----~-~~~~-~~~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 167 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYV-PLGRLLA-----R-AVVR-RKLSRRFYNRCDAVIAPSEKIADLLREYG--------- 167 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHH-hcccchh-----H-HHHH-HHHHHHHhhhCCEEEeccHHHHHHHHhcC---------
Confidence 8899999999999866432221 1111000 0 0111 02366789999999999997665543321
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.. .++.++|+|+|...+.+.... ..+..+....+++.|+++|++.
T Consensus 168 --------------~~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 168 --------------VK-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred --------------CC-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 11 168999999999887653211 0122333456678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+. .+++.+ ++|+++. ...+...++++++.++|.|+|.++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998643 344554 6787653 34566777788888999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998887 99999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 002660 483 LKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 483 ~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
++.+++++ +++++.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997665 66666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=301.07 Aligned_cols=385 Identities=20% Similarity=0.256 Sum_probs=270.4
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+.. |+.||.+.++..++++|+++| |+|++++.....+.........
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~-------------- 53 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKGYK-------------- 53 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccccccccce--------------
Confidence 6899985553 566999999999999999999 9999998764322211000000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~~~~ 162 (895)
....+++++++++..... . . ..+..+..+.. +.......+.. +..+||+||++.+ .....+..+
T Consensus 54 -~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 54 -REEVDGVRVHRVPLPPYK-K--N-GLLKRLLNYLS----FALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred -EEecCCeEEEEEecCCCC-c--c-chHHHHHhhhH----HHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 011247888887754331 0 0 00000111111 11111111110 1267999999973 455566667
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|++++.|+.++....... ..... ...+++..++ ++..++.+|.++++|+...+.+. .+
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~-------- 183 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVALG---LLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RR-------- 183 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHcc---Ccccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hc--------
Confidence 777799999999998765432211 11110 0011233333 66789999999999998777653 11
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
+.+..++.++|||+|...+.+..... .+.+.....+++.++++|++
T Consensus 184 --------------~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 184 --------------GVPPEKISVIPNGVDLELFKPPPADE--------------------SLRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred --------------CCCcCceEEcCCCCCHHHcCCccchh--------------------hhhhccCCCCcEEEEEecCc
Confidence 12223899999999988776533110 01222234567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
.+.||++.+++|+..+.+. +++.+ ++|.++.. ..+...+...++ ++|.|.|+++.+++.++|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999643 44444 77877642 333444444454 67999999999999999999
Q ss_pred hhcCCcEEEecCCCCCC-----chHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 002660 402 AAKTKGVFINPAFIEPF-----GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~-----gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 476 (895)
| |++++|+..|++ |++++|||+||+|||+++.++..+++.++.+|++++++|+++++++|.+++++++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999998876 7889999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCHHHHHHHHH
Q 002660 477 RCRQNGLKNIH-LFSWPEHCKTYL 499 (895)
Q Consensus 477 ~~~~~~~~~~~-~~s~~~~a~~~~ 499 (895)
++++++++.+. +|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999995 999999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=300.87 Aligned_cols=363 Identities=22% Similarity=0.319 Sum_probs=258.5
Q ss_pred eEeeeecccccccCcccCCCCC-CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 5 NYFACSIHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~-~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
||++++.+.. + ..||+++|+.+|+++|+++| |+|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 5777764443 4 78999999999999999999 99999987643221110000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..... ... ......+.....+......... ..+||+||+++......
T Consensus 53 ------~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~Dii~~~~~~~~~~----- 99 (365)
T cd03809 53 ------AALRL--LLR------LPRRLLWGLLFLLRAGDRLLLL--------------LLGLDLLHSPHNTAPLL----- 99 (365)
T ss_pred ------hcccc--ccc------cccccccchhhHHHHHHHHHhh--------------hcCCCeeeecccccCcc-----
Confidence 00000 000 0001111111111111111111 15799999998754433
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+++++|+..+......... . .....+. .++..++.+|.++++|+...+.+.+.+.. .+.
T Consensus 100 ~~~~~~~i~~~hd~~~~~~~~~~~~-----~----~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~~--- 164 (365)
T cd03809 100 RLRGVPVVVTIHDLIPLRFPEYFSP-----G----FRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PPD--- 164 (365)
T ss_pred cCCCCCEEEEeccchhhhCcccCCH-----H----HHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CHH---
Confidence 5679999999999865442221110 0 1112222 25668999999999999888877666542 222
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
++.++|||+|...+.+.... . ........+++.|+++||+.
T Consensus 165 ------------------~~~vi~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 165 ------------------KIVVIPLGVDPRFRPPPAEA--------------------E-VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred ------------------HEEeeccccCccccCCCchH--------------------H-HHHHhcCCCCCeEEEeCCCc
Confidence 89999999999877643200 0 11223346788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
+.||++.+++++..+.+..+...+ +++|.+..... .....+.+.++.++|.++|+++.+++..+|+.|
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 273 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGA- 273 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCCCCE-EEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh-
Confidence 999999999999999754433344 46676543221 122233567888999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
|++++||..|++|++++|||++|+|||+++.|+..|++. .+|+++++.|.++++++|.+++.+++.+..++++++
T Consensus 274 ---d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 274 ---RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999874 578999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHH
Q 002660 484 KNIHLFSWPEHCKTYL 499 (895)
Q Consensus 484 ~~~~~~s~~~~a~~~~ 499 (895)
+.+++|||+.++++++
T Consensus 349 ~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 349 ARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 7778999999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=301.49 Aligned_cols=369 Identities=12% Similarity=0.083 Sum_probs=228.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++|.. + -..||+++.+.+|++.|.++| |+|.++......+....
T Consensus 1 mkil~i~~-~------------l~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~~------------------ 47 (405)
T PRK10125 1 MNILQFNV-R------------LAEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKESV------------------ 47 (405)
T ss_pred CeEEEEEe-e------------ecCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCccccc------------------
Confidence 79999973 2 246899999999999999999 99999887643222100
Q ss_pred ccCCCCCCe-EEEecCCCCCCcccccccCCCChHHHH-HHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHH
Q 002660 84 DDMGESSGA-YIIRIPFGPKDKYIAKELLWPHIPEFV-DGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAAL 161 (895)
Q Consensus 84 ~~~~~~~gv-~i~~i~~~~~~~~~~~~~~~~~l~~f~-~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~ 161 (895)
....+ .++.+..... .++... +.++. ...+.......+.+.+ ..+|||||.|....+++...
T Consensus 48 ----~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~~ 111 (405)
T PRK10125 48 ----SHQNYPQVIKHTPRMT-AMANIA-----LFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNLK 111 (405)
T ss_pred ----ccCCcceEEEecccHH-HHHHHH-----HHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecHH
Confidence 00111 1111111000 000000 00000 0000111111111211 27899999998754322111
Q ss_pred ---------HhccCCCCEEEEeCCCchhh---HH-H---HHHHhh--------ccHHHHHhh-hhhhHHHHHHHhhhccc
Q 002660 162 ---------LSGALNVPMLFTGHSLGRDK---LE-Q---LLKQAR--------LSRDEINAT-YKIMRRIEAEELSLDAS 216 (895)
Q Consensus 162 ---------~~~~~~ip~v~t~H~~~~~~---~~-~---~~~~~~--------~~~~~~~~~-~~~~~~~~~e~~~l~~a 216 (895)
..+..++|+|+|+||.|... .. . -...+. .+....... ..+.++...-+..++.+
T Consensus 112 ~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~ 191 (405)
T PRK10125 112 SVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALG 191 (405)
T ss_pred HHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcC
Confidence 12455799999999988531 00 0 000000 000000000 00111111122335567
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
+.+|++|++..+.+...+.. .++.+||||||++.+.+.....
T Consensus 192 ~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~-------------- 233 (405)
T PRK10125 192 CQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP-------------- 233 (405)
T ss_pred cEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc--------------
Confidence 89999999888765443321 2899999999975433211000
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALAR-P-DPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgr-l-~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~ 373 (895)
.....+++++|+++|+ + .+.||++.+++|+..+. + ++. +++|+++...
T Consensus 234 ---------~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~--~~~L~ivG~g~~~~--------------- 284 (405)
T PRK10125 234 ---------PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---D--KIELHTFGKFSPFT--------------- 284 (405)
T ss_pred ---------ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---C--CeEEEEEcCCCccc---------------
Confidence 0001246788999999 4 47899999999999873 2 344 4778764210
Q ss_pred HHHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEE
Q 002660 374 LIDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLL 452 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~l 452 (895)
...+.++|+.. .+++.++|+.| |+||+||..|+||++++||||||+|||+|+.||.+|++.+. +|++
T Consensus 285 -------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~l 352 (405)
T PRK10125 285 -------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKT 352 (405)
T ss_pred -------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEE
Confidence 13577788753 46899999999 99999999999999999999999999999999999999764 8999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 453 VDPHDQQSVADALLKLVADKQLWAR----CRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~~~~~----~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++|.|++++|+++ +++..++ +..++++.+ ++|||+.++++|+++|+++
T Consensus 353 v~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 353 VSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred ECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999999999864 3333322 234577777 6899999999999999863
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=295.86 Aligned_cols=356 Identities=21% Similarity=0.230 Sum_probs=250.8
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+. |..||.++++.+|+++|+++| |+|++++.....+.... ..
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--------~~--------- 49 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY--------GG--------- 49 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC--------CC---------
Confidence 688887432 668999999999999999999 99999986532211100 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHH--
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSA-- 159 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~-- 159 (895)
......... . ........+...+.. .+||+||++.+. .....
T Consensus 50 ---~~~~~~~~~-~---------------~~~~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 50 ---EQEVVRVIV-L---------------DNPLDYRRAARAIRL--------------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred ---cccceeeee-c---------------CCchhHHHHHHHHhh--------------cCCCEEEEeeccccccchhhHH
Confidence 000111100 0 000011112222222 679999998741 12222
Q ss_pred -HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 160 -ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 160 -~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
....+..++|+|++.|+..... .. ....+ .++..++.+|.|+++|............
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~----------~~-------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHE----------PR-------PGDRA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCccc----------cc-------hhhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 2223447999999999971111 00 00111 2445688999999997444443322211
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
+ .++.++|||+|...+.+... ..+.....++++|++
T Consensus 155 ~---------------------~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 P---------------------EKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred C---------------------CcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 1 28999999999877654210 012223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC-CCCCCHH
Q 002660 319 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH-HKQSDVP 396 (895)
Q Consensus 319 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~el~ 396 (895)
+|++.+.||++.+++|+..+.+. .+++.+ ++|.+....... .....+++.++++.++|.|+|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998643 344554 778765322110 1111144778899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEecCCCC--CCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHH
Q 002660 397 EIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 474 (895)
Q Consensus 397 ~ly~~A~~~~dv~v~ps~~E--g~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 474 (895)
.+|+.| |++++||..| ++|++++|||+||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 475 WARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 475 ~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
+.++++++++.+++|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999977999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=298.45 Aligned_cols=335 Identities=19% Similarity=0.215 Sum_probs=242.3
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
..||.++++.+++++|+++| |+|++++....... +.... ...++.+.+++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~~~----------------~~~~~~~~~~~~~~~---- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDDEI----------------EKLGGKIYYIPARKK---- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHHHH----------------HHcCCeEEEecCCCc----
Confidence 57899999999999999999 99999997532110 11111 013666666443211
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCE-EEEeCCCchhhHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 185 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~-v~t~H~~~~~~~~~~ 185 (895)
....+...+...+.+ .+||+||+|......++..+++..+.|. +++.|+........
T Consensus 64 -------~~~~~~~~~~~~~~~--------------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 121 (358)
T cd03812 64 -------NPLKYFKKLYKLIKK--------------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKK- 121 (358)
T ss_pred -------cHHHHHHHHHHHHhc--------------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccccc-
Confidence 111222222222211 6799999999866666666666677775 66788764332100
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
.. .... ...++..++.++.++++|....+.+... ... .++.+
T Consensus 122 ------~~-----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~~---------------------~~~~v 163 (358)
T cd03812 122 ------KK-----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VKN---------------------KKFKV 163 (358)
T ss_pred ------ch-----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CCc---------------------ccEEE
Confidence 00 0000 1124457889999999999877766443 111 28999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 345 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~ 345 (895)
||||+|.+.|.+.... ...+.......++++|+++||+.+.||++.+++|+..+.+.. +
T Consensus 164 i~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~--~ 222 (358)
T cd03812 164 IPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN--P 222 (358)
T ss_pred EeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhC--C
Confidence 9999999887653211 011233444567889999999999999999999999997544 4
Q ss_pred cEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 346 NLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 346 ~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
++. +++|+++. ...+...++++++.++|.|+|+ .+++.++|+.| |++|+||..|+||++++|
T Consensus 223 ~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~~~~lE 285 (358)
T cd03812 223 NAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLPLVLIE 285 (358)
T ss_pred CeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCCHHHHH
Confidence 454 47898764 3456677788899999999998 78999999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~ 486 (895)
|||||+|||+|+.||..+++.+ ..+++..++++++++++|.+++++|+.++.++..+....
T Consensus 286 Ama~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 286 AQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 9999999999999999999988 566777777889999999999999998888877776655
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=303.69 Aligned_cols=284 Identities=19% Similarity=0.185 Sum_probs=205.1
Q ss_pred CCCcEEEeccccchhHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHh-hhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA-TYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.++|+||++....+ .++. +..++|+|++.|+.....+..+..........+.. ..+... ..|+..++.+|.|+
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~ad~vi 177 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLL--AYERAIAARFDAAT 177 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHH--HHHHHHHhhCCeEE
Confidence 67999999875332 2222 34589999999997654443332211111111100 011122 24888999999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+.....
T Consensus 178 ~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~------------------ 217 (397)
T TIGR03087 178 FVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP------------------ 217 (397)
T ss_pred EcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc------------------
Confidence 9999888776543321 112899999999999887532110
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVK----AFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~----A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
.. ..+++++|+|+||+++.||++.++. ++..+.+. .+++. +|+|+++. .+ +
T Consensus 218 ----~~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~--~p~~~l~ivG~g~~------------~~----~ 273 (397)
T TIGR03087 218 ----NP--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRAR--RPAAEFYIVGAKPS------------PA----V 273 (397)
T ss_pred ----CC--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHH--CCCcEEEEECCCCh------------HH----H
Confidence 00 1245679999999999999999884 45455432 34444 47888763 11 2
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeC
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~ 454 (895)
.++...++|.|.|+++ ++..+|+.| |++|+||. .||++++++||||||+|||+|+.++. .+....++|+++.
T Consensus 274 ~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 274 RALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 2334456799999975 799999999 99999997 69999999999999999999997543 3333456788886
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+|+++++++|.++++|++.++++++++++.+ ++|||+.+++++.++|+
T Consensus 347 -~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999 69999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=301.60 Aligned_cols=373 Identities=18% Similarity=0.225 Sum_probs=249.3
Q ss_pred CCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecC-CCCCC
Q 002660 27 DTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIP-FGPKD 103 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~-~~~~~ 103 (895)
..||.|+.+++.+.+|.+. + |+|+|+|....... .+.+.. ....+.+ ...+++.++++. .+
T Consensus 12 ~ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~~-~~~~f~~--~~~~~~~~~~~~~~~--- 75 (419)
T cd03806 12 AGGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILEK-VESRFNI--ELDRPRIVFFLLKYR--- 75 (419)
T ss_pred CCCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHHH-HHHhcCe--ecCCCceEEEEecce---
Confidence 3469999999999999998 6 99999998743211 000000 0000001 112466666653 21
Q ss_pred cccccccCCCCh---HHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc-ccc-hhHHHHHhccCCCCEEEEeCCCc
Q 002660 104 KYIAKELLWPHI---PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADA-GDSAALLSGALNVPMLFTGHSLG 178 (895)
Q Consensus 104 ~~~~~~~~~~~l---~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~-~~~-~~~~~~~~~~~~ip~v~t~H~~~ 178 (895)
.+++. ..|+.+ .+++..++..+.. +.. .+||||..|. +.. ..++..++ ++|+|++.| +
T Consensus 76 ~~~~~-~~~~r~~~~~~~~~~~~~~~~~----~~~-------~~pDv~i~~~g~~~~~~~~~~~~---~~~~i~y~h--~ 138 (419)
T cd03806 76 KLVEA-STYPRFTLLGQALGSMILGLEA----LLK-------LVPDIFIDTMGYPFTYPLVRLLG---GCPVGAYVH--Y 138 (419)
T ss_pred eeecc-ccCCceeeHHHHHHHHHHHHHH----HHh-------cCCCEEEEcCCcccHHHHHHHhc---CCeEEEEec--C
Confidence 12222 244443 2233222222221 111 4699988886 333 33333333 789999999 3
Q ss_pred h----hhHHHHHHHhh--------ccH----HHHHhh-hhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHH
Q 002660 179 R----DKLEQLLKQAR--------LSR----DEINAT-YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 241 (895)
Q Consensus 179 ~----~~~~~~~~~~~--------~~~----~~~~~~-~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~ 241 (895)
+ +..... ..+. ... ...... |+++.+ .|+..++.||.|+++|+...+.+.+.+...
T Consensus 139 P~~~~d~l~~~-~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~---- 211 (419)
T cd03806 139 PTISTDMLQKV-RSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKRN---- 211 (419)
T ss_pred CcchHHHHHHH-hhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCcC----
Confidence 4 222111 1111 000 011111 222223 378899999999999998777665443210
Q ss_pred HHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeC
Q 002660 242 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR 321 (895)
Q Consensus 242 ~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgr 321 (895)
.++.+||||+|.+.|.+.... ...+.++|+|+||
T Consensus 212 -------------------~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr 245 (419)
T cd03806 212 -------------------TKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQ 245 (419)
T ss_pred -------------------CCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEe
Confidence 278999999999877543210 1245679999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 002660 322 PDPKKNITTLVKAFGECRPLREL---ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 397 (895)
Q Consensus 322 l~~~Kgi~~ll~A~~~l~~~~~~---~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ 397 (895)
+.+.||++.+|+||..+.+..+. +++.+ |+|++...+ ..++..++.++++.+++.++|.|+|.+|.+++..
T Consensus 246 ~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~-----~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~ 320 (419)
T cd03806 246 FRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED-----DEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE 320 (419)
T ss_pred ecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc-----cHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence 99999999999999998754333 34554 778764321 2346788889999999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc-hhccc---cCCCeEEeCCCCHHHHHHHHHHHHhCHH
Q 002660 398 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSVADALLKLVADKQ 473 (895)
Q Consensus 398 ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~-~eiv~---~~~~g~lv~p~d~~~la~ai~~ll~~~~ 473 (895)
+|+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+++++++|.+++++++
T Consensus 321 ~l~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 321 ELSTA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSE 394 (419)
T ss_pred HHHhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCH
Confidence 99999 9999999999999999999999999999999775 57887 789999985 99999999999999665
Q ss_pred H-HHHHHHHHHHHhhcCCHHHHHH
Q 002660 474 L-WARCRQNGLKNIHLFSWPEHCK 496 (895)
Q Consensus 474 ~-~~~~~~~~~~~~~~~s~~~~a~ 496 (895)
. ++.+++++++..++|||+...+
T Consensus 395 ~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 395 EERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHHHHHHHhhCHHHhcc
Confidence 4 4445444444337999998653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=294.95 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=218.6
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|+. ....++...++..++|++++.|+....... . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----------~--~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP--------D-----------A--IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC--------c-----------h--HHHHHHHhhCCEEEE
Confidence 67999999987 444455555555689999999965321100 0 0 124456889999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+|+...+.+...+. .+..++.++|||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~----------------------~~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG----------------------CDPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC----------------------CCcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99988877655531 12238999999999888764320
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ..++...+.++++
T Consensus 174 ------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 174 ------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred ------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 0124567899999999999999999999998643 345554 7788764 2456677788888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~ 454 (895)
.++|.|.|+++.+++..+|+.| |++++|+.. |+||++++|||+||+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKT 497 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~ 497 (895)
+.|+++++++|.+++++++.+..+++++++.+ ++|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 59999999875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-31 Score=292.94 Aligned_cols=278 Identities=21% Similarity=0.228 Sum_probs=211.2
Q ss_pred CCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|...+..++..+... .++|++++.|+...... ...+. .+.....++.+++
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----------------~~~~~-----~~~~~~~~~~~~~ 136 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----------------LRMLA-----YRLTDFLSDLTTN 136 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH----------------HHHHH-----HHHHhhccCceEE
Confidence 68999999987665555544433 46789999998743210 00011 1223455777888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+|....+.+.... . .+..++.+||||+|...|.+... ...
T Consensus 137 ~s~~~~~~~~~~~-~---------------------~~~~~~~~i~ng~~~~~~~~~~~------------------~~~ 176 (360)
T cd04951 137 VSKEALDYFIASK-A---------------------FNANKSFVVYNGIDTDRFRKDPA------------------RRL 176 (360)
T ss_pred EcHHHHHHHHhcc-C---------------------CCcccEEEEccccchhhcCcchH------------------HHH
Confidence 8877666654432 1 12238999999999887764321 111
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
..+..+...+++++++++||+.+.||++.+++|+..+.+.. +++.+ ++|+++. ..++.+.+..+++
T Consensus 177 ~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~ 243 (360)
T cd04951 177 KIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--LDIKLLIAGDGPL-----------RATLERLIKALGL 243 (360)
T ss_pred HHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--CCeEEEEEcCCCc-----------HHHHHHHHHhcCC
Confidence 23334445567889999999999999999999999986433 44554 7888764 2456677778888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.|+|. .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.|+..|++.+ +|++++++|+++
T Consensus 244 ~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~ 315 (360)
T cd04951 244 SNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEA 315 (360)
T ss_pred CCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHH
Confidence 889999997 57899999999 9999999999999999999999999999999999999875 789999999999
Q ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 461 VADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 461 la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++|.++++ +++.+..++++ ++.+ ++|||+.++++|.++|+
T Consensus 316 ~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 316 LANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999995 56666666665 6666 69999999999999986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=288.38 Aligned_cols=344 Identities=22% Similarity=0.279 Sum_probs=250.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. + .||.++.+.+++++|+++| |+|++++..... ...+
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~~----------------- 46 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPFY----------------- 46 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCcc-----------------
Confidence 5788874432 3 8999999999999999999 999999876432 0000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
...+++.+..++.... . ..+..+ .+...+...+. ..+||+||++... ........
T Consensus 47 --~~~~~~~~~~~~~~~~-~-----~~~~~~-~~~~~~~~~l~--------------~~~~d~i~~~~~~--~~~~~~~~ 101 (348)
T cd03820 47 --ELDPKIKVIDLGDKRD-S-----KLLARF-KKLRRLRKLLK--------------NNKPDVVISFLTS--LLTFLASL 101 (348)
T ss_pred --ccCCccceeecccccc-c-----chhccc-cchHHHHHhhc--------------ccCCCEEEEcCch--HHHHHHHH
Confidence 0123566666654322 1 000000 11111222221 1679999999875 12222222
Q ss_pred cCC-CCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 165 ALN-VPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 165 ~~~-ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
..+ +|++++.|+......... .+...++..++.+|.+++.|..........
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---------- 153 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYKK---------- 153 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc----------
Confidence 334 499999998754321110 000025567999999999998765221111
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+..++.++|||++...+.+. ...+++.++++|++.
T Consensus 154 ---------------~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 154 ---------------FNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred ---------------CCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 11289999999998766532 024578999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++|+..+.+. .+++.+ ++|.++.. ..+.+.+.++++.++|.|.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAKK--HPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHhc--CCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 999999999999999643 344544 77877642 345567788899999999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999864 5677777777999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHH
Q 002660 482 GLKNIHLFSWPEHCKTYL 499 (895)
Q Consensus 482 ~~~~~~~~s~~~~a~~~~ 499 (895)
+++.+++|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 977778999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=297.21 Aligned_cols=345 Identities=23% Similarity=0.213 Sum_probs=246.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++++. + +..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~-~------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNT-S------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEec-C------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 79999972 2 345899999999999999999 9999998631
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
. . +...+. ..+|||||+|+...+.+.....
T Consensus 41 -------~----------~-------------------~~~~~~--------------~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A-------------------LISKIE--------------IINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h-------------------hhhChh--------------cccCCEEEEEccccCccCHHHH
Confidence 1 0 000011 1679999999864444443333
Q ss_pred ccC--CCCEEEEeCCCchhhHHHHHHHh---------h---c-cHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHH
Q 002660 164 GAL--NVPMLFTGHSLGRDKLEQLLKQA---------R---L-SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 228 (895)
Q Consensus 164 ~~~--~ip~v~t~H~~~~~~~~~~~~~~---------~---~-~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~ 228 (895)
... ++|+|+|+|+.+........... . . ............++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 333 99999999987543210000000 0 0 000000000011110 11123567788888886665
Q ss_pred HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc
Q 002660 229 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 308 (895)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (895)
.+...+. + +..++.++|||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~-~---------------------~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL-F---------------------KGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc-c---------------------CCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433321 1 1238999999999988864321 12233444
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.+++++++++.|+... .||++.+++|++.+.+. ..+++.+ ++|+++... ..++..++.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 5566777777777765 89999999999988532 2355655 667765311 014556899
Q ss_pred eCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHH
Q 002660 386 YPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 464 (895)
Q Consensus 386 ~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~a 464 (895)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 67899999999 9999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 465 LLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 465 i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
|.+++++++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 5999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-30 Score=289.58 Aligned_cols=351 Identities=22% Similarity=0.268 Sum_probs=256.9
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.++++..|+++|.+.| |+|.+++.....+. ...+ ...++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~--------~~~~-------------~~~~i~v~~~~~~~~----- 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL--------GEEL-------------EEAGVPVYCLGKRPG----- 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh--------hHHH-------------HhcCCeEEEEecccc-----
Confidence 3999999999999999999 99999986432110 0000 013677766654221
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~ 186 (895)
+... .+..++...+.+ .+||+||+|.......+...++. .++|++++.|+......
T Consensus 63 ----~~~~-~~~~~~~~~~~~--------------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 119 (365)
T cd03807 63 ----RPDP-GALLRLYKLIRR--------------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---- 119 (365)
T ss_pred ----cccH-HHHHHHHHHHHh--------------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----
Confidence 0111 122223222222 68999999987665555555555 68899999999765421
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.. ...+..+ .++...+.+|.+++.|....+.+... .+.. .++.++
T Consensus 120 --~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi 164 (365)
T cd03807 120 --KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVI 164 (365)
T ss_pred --ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEe
Confidence 00 0001111 14456788999999998766655432 2222 389999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...|.+.... ....+.+++.+++.++++++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~ 224 (365)
T cd03807 165 PNGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPN 224 (365)
T ss_pred CCCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCC
Confidence 999998877653311 112233455566788999999999999999999999998643 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
+.+ ++|.++... .+..... ..++.+++.|.|. .+++..+|+.| |++|+|+..|++|++++|
T Consensus 225 ~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~E 287 (365)
T cd03807 225 ARLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLE 287 (365)
T ss_pred eEEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHH
Confidence 554 678775422 2223333 7788889999996 57899999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
||+||+|||+++.|+..|++.+ +|++++++|+++++++|.+++++++.+.++++++++.+ ++|||+..+++|.++|+
T Consensus 288 a~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 288 AMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999876 89999999999999999999999999999999999999 58999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=304.06 Aligned_cols=341 Identities=28% Similarity=0.369 Sum_probs=250.2
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
+......+++++++|+++...|. ..+|+++..|+.... ++.+.. +. ||++|.++|+......+++
T Consensus 121 ~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~~~~~-~l~~~~-----------~~-p~~~~~i~~~~h~~~~lla 185 (495)
T KOG0853|consen 121 EQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFVSACV-PLLKQL-----------SG-PDVIIKIYFYCHFPDSLLA 185 (495)
T ss_pred hhhhccceeEEEEeccchhhhhh--hhhceeecchHHHHH-HHHHHh-----------cC-CcccceeEEeccchHHHhc
Confidence 44455679999999998765555 678999998885433 332221 13 9999999999999999999
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
++.|++.+.+.|.+...+++. ...+|.+++.+...+.............
T Consensus 186 ~r~g~~~~l~~~~l~~~e~e~----------------------------~~~~~~~~~ns~~~~~~f~~~~~~L~~~--- 234 (495)
T KOG0853|consen 186 KRLGVLKVLYRHALDKIEEET----------------------------TGLAWKILVNSYFTKRQFKATFVSLSNS--- 234 (495)
T ss_pred cccCccceeehhhhhhhhhhh----------------------------hhccceEecchhhhhhhhhhhhhhcCCC---
Confidence 999999999999886655433 4445555555554444433333222221
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.+.+.+++||.+.+.+..-+.... .....+...+......+++.+.|+.
T Consensus 235 ------------------d~~~~y~ei~~s~~~~~~~~~~~~-------------~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 235 ------------------DITSTYPEIDGSWFTYGQYESHLE-------------LRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred ------------------Ccceeeccccchhccccccccchh-------------cccccceeeeecccceEeeeeeecC
Confidence 366777777766665421111000 0001111222334467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCC---CcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-CcEEeCCCCCCCCHHHHH
Q 002660 324 PKKNITTLVKAFGECRPLREL---ANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~---~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~el~~ly 399 (895)
+.||+...++||..+...-+. +..++++++.+.++...++..+++.++..+++++++. ..|.|..+.++.+. |
T Consensus 284 pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---y 360 (495)
T KOG0853|consen 284 PGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---Y 360 (495)
T ss_pred CCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---H
Confidence 999999999999988654432 4555544442237778888999999999999999996 56777788665554 5
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHH---HHHHHHHHHHhCHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SVADALLKLVADKQLWA 476 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~---~la~ai~~ll~~~~~~~ 476 (895)
+.+++++.+++.|+. |.||+|++|||+||+|||+++.||+.|+|.++.+|++++| +.+ .+|++|.++.+||+.|.
T Consensus 361 rl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~ 438 (495)
T KOG0853|consen 361 RLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWA 438 (495)
T ss_pred HHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHH
Confidence 665556667777777 9999999999999999999999999999999999999999 666 59999999999999999
Q ss_pred HHHHHHHHHhh-cCCHHHHHHHHHHHHHccc
Q 002660 477 RCRQNGLKNIH-LFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 477 ~~~~~~~~~~~-~~s~~~~a~~~~~~~~~~~ 506 (895)
+|+.+++++++ .|||.++.+++.+.+....
T Consensus 439 ~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 439 RMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 99999999995 7999888888888777443
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=296.72 Aligned_cols=238 Identities=18% Similarity=0.203 Sum_probs=194.7
Q ss_pred HHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCC
Q 002660 209 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEG 288 (895)
Q Consensus 209 e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~ 288 (895)
++.+.+.||.|+++|+...+.+.+.+.. + .++.+++||+|.+.+......
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~~~--~---------------------~~i~vvyp~vd~~~~~~~~~~------- 263 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALWRI--P---------------------ERIKRVYPPCDTSGLQALPLE------- 263 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHcCC--C---------------------CCeEEEcCCCCHHHcccCCcc-------
Confidence 6678899999999999887766544321 1 278999999998766321100
Q ss_pred CCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCccccccchH
Q 002660 289 NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSA 365 (895)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~--~~~~l~l-ivG~~~~~~~~~~~~~ 365 (895)
..+++++++++||+.++||++.+|+||..+.+.. ..+++.+ |+|+++.. +..
T Consensus 264 --------------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~ 318 (463)
T PLN02949 264 --------------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDE 318 (463)
T ss_pred --------------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccH
Confidence 0234678999999999999999999999875321 1244544 77876421 223
Q ss_pred HHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch-hcc
Q 002660 366 SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-DIH 444 (895)
Q Consensus 366 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-eiv 444 (895)
++..++.++++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++
T Consensus 319 ~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV 394 (463)
T PLN02949 319 ERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIV 394 (463)
T ss_pred HHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceee
Confidence 4567889999999999999999999999999999999 99999999999999999999999999999999975 777
Q ss_pred cc---CCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 445 RV---LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 445 ~~---~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.+ +.+|++++ |+++++++|.++++ +++.++++++++++.+++|||+..++++.+.++++++
T Consensus 395 ~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 395 LDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 64 56798875 99999999999998 5788899999999999889999999999999998765
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=290.15 Aligned_cols=372 Identities=25% Similarity=0.321 Sum_probs=268.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||...++..|+++|.+.| |+|++++........... .
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~-------~---------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEE-------V---------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceee-------e----------
Confidence 6888885553 446999999999999999999 999999986432211000 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
.......... . . ..........+...+... +.+ .+||+||++.+.........++
T Consensus 51 -----~~~~~~~~~~--~---~-~~~~~~~~~~~~~~~~~~-------~~~-------~~~Dii~~~~~~~~~~~~~~~~ 105 (374)
T cd03801 51 -----GGIVVVRPPP--L---L-RVRRLLLLLLLALRLRRL-------LRR-------ERFDVVHAHDWLALLAAALAAR 105 (374)
T ss_pred -----cCcceecCCc--c---c-ccchhHHHHHHHHHHHHH-------hhh-------cCCcEEEEechhHHHHHHHHHH
Confidence 0000000000 0 0 000000000111111111 111 6799999999865555556777
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|++++.|+......... ......+ ....++..++.+|.+++.|....+.+.+.+..
T Consensus 106 ~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------- 165 (374)
T cd03801 106 LLGIPLVLTVHGLEFGRPGNE----------LGLLLKL--ARALERRALRRADRIIAVSEATREELRELGGV-------- 165 (374)
T ss_pred hcCCcEEEEeccchhhccccc----------hhHHHHH--HHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC--------
Confidence 789999999999865432110 0000111 11125567899999999999888776555432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..++.++|||+|...+.+.. ...........+++.++++|++.+
T Consensus 166 --------------~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~g~~~~ 210 (374)
T cd03801 166 --------------PPEKITVIPNGVDTERFRPAP---------------------RAARRRLGIPEDEPVILFVGRLVP 210 (374)
T ss_pred --------------CCCcEEEecCcccccccCccc---------------------hHHHhhcCCcCCCeEEEEecchhh
Confidence 112899999999998875421 001111222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 325 KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
.||++.+++|+..+.... +++.+ ++|+++. ...+...+.+.+..++|.|.|+++.+++..+|+.|
T Consensus 211 ~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 276 (374)
T cd03801 211 RKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPALYAAA- 276 (374)
T ss_pred hcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc-
Confidence 999999999999986433 45554 6775542 34555666778888999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
|++++|+..|++|++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.+.+++++++
T Consensus 277 ---di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 277 ---DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 002660 484 KNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 484 ~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+.+ +.|+|+.+++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhhC
Confidence 777 69999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-30 Score=282.86 Aligned_cols=347 Identities=25% Similarity=0.311 Sum_probs=253.9
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.+.++..++++|.+.| |+|++++....... . ....++.++.++.... ...
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~----------~-------------~~~~~~~~~~~~~~~~--~~~ 61 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE----------E-------------LEALGVKVIPIPLDRR--GIN 61 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc----------c-------------cccCCceEEecccccc--ccC
Confidence 5799999999999999999 99999987642211 0 0123777777775431 000
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc-cCCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG-ALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~-~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+..+. ....+...+ .+ .+||+||+|......++...++ ..+.+++++.|+..........
T Consensus 62 ---~~~~~~-~~~~~~~~~-------~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (359)
T cd03808 62 ---PFKDLK-ALLRLYRLL-------RK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL 123 (359)
T ss_pred ---hHhHHH-HHHHHHHHH-------Hh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh
Confidence 111111 111111111 12 6799999998766666666655 4456788888886543211100
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.......+ ++..++.+|.+++.|+...+.+...+.... ..++.++
T Consensus 124 ------------~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~---------------------~~~~~~~ 168 (359)
T cd03808 124 ------------KRRLYLLL--ERLALRFTDKVIFQNEDDRDLALKLGIIKK---------------------KKTVLIP 168 (359)
T ss_pred ------------HHHHHHHH--HHHHHhhccEEEEcCHHHHHHHHHhcCCCc---------------------CceEEec
Confidence 11122222 566788999999999988776655432110 1278889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|+|+|.+.+.+.... ...+++.|+++|++.+.||++.+++++..+.+. .++
T Consensus 169 ~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~--~~~ 219 (359)
T cd03808 169 GSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAK--GPN 219 (359)
T ss_pred CCCCChhhcCccccc---------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc--CCC
Confidence 999999877643210 124678999999999999999999999998642 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
+.+ ++|.++...... .. .+...+..++|.|.|+ .+++..+|+.| |++++|+..|++|++++||
T Consensus 220 ~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea 283 (359)
T cd03808 220 VRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEA 283 (359)
T ss_pred eEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHH
Confidence 554 778776432211 10 3566777789999998 78999999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 002660 426 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 426 ~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~ 499 (895)
|+||+|||+++.++..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 284 ~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 284 MAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999999999988999999999999999999999999999999999999997 7999999999876
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=287.13 Aligned_cols=236 Identities=12% Similarity=0.082 Sum_probs=159.3
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 4899999999993 56889999999999998 5999999999999999999999983 57999999999964
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhh---hc--c-cc-----------------ccccCCcccc-cccc
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS---QV--T-DK-----------------KAESGEKVLT-PAEQ 744 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~--~-~~-----------------~~~~~~~~~~-~~~~ 744 (895)
..+.. ... .+..+.+.+++..... .. . .. .......... ....
T Consensus 74 ~~~~i-~~~------------~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 74 DGNLI-FSH------------NLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CCCEe-hhh------------cCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 22110 000 0011111111110000 00 0 00 0000000000 0000
Q ss_pred cCCceEEEEEeeCCCCCccHHHHHHHHHhc-cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCC
Q 002660 745 LSTNYCYAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES 823 (895)
Q Consensus 745 ~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~ 823 (895)
.....|+.+...++ ...+++.+.+... ...+.++.+.+. ++||+|+|+|||.||++|++++||+++++|| +||+
T Consensus 141 ~~~i~ki~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~ 215 (266)
T PRK10976 141 PDGVSKVFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDG 215 (266)
T ss_pred cCCceEEEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCC
Confidence 11234444332111 1233445555432 234666777775 9999999999999999999999999999999 7777
Q ss_pred CCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 824 GDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 824 nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
.| | ++||+.+|+||||+||. +++|+.|++ .+||.++++|||+++|++|.+
T Consensus 216 ~N-D-i~Ml~~ag~~vAm~NA~--~~vK~~A~~---------------~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 216 MN-D-AEMLSMAGKGCIMGNAH--QRLKDLLPE---------------LEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred cc-c-HHHHHHcCCCeeecCCc--HHHHHhCCC---------------CeecccCchHHHHHHHHHHhh
Confidence 77 7 99999999999999999 666777652 248999999999999999854
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-30 Score=285.32 Aligned_cols=356 Identities=21% Similarity=0.247 Sum_probs=245.4
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. +..+||.++++.+|+++|+++| |+|++++......... ..
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQD--KE---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCcc--cc----------------
Confidence 6888985543 2347999999999999999999 9999998764321110 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~~~~ 163 (895)
..+..+...+.............+.....+.......+.+ .+.+ .+||+||+|... ........+
T Consensus 51 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 51 ----VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEFAR---LLED-------FRPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred ----cccceeeccccccccCCCchhhhhHHHhccCHHHHHHHHH---HHHH-------cCCCEEEECCccchHHHHHHHH
Confidence 0011111111000000000000000000000011111111 1111 679999999863 333344456
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|++.|+.+...... . ......|.++++|+...+.+.....
T Consensus 117 ~~~~~~~i~~~hd~~~~~~~~-------------------~------~~~~~~d~ii~~s~~~~~~~~~~~~-------- 163 (359)
T cd03823 117 RDRGIPIVLTLHDYWLICPRQ-------------------G------LFKKGGDAVIAPSRFLLDRYVANGL-------- 163 (359)
T ss_pred HhcCCCEEEEEeeeeeecchh-------------------h------hhccCCCEEEEeCHHHHHHHHHcCC--------
Confidence 677899999999875422100 0 0122239999999877666544321
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+..++.++|||+|...+.+... ....++++++++|++.
T Consensus 164 ---------------~~~~~~vi~n~~~~~~~~~~~~---------------------------~~~~~~~~i~~~G~~~ 201 (359)
T cd03823 164 ---------------FAEKISVIRNGIDLDRAKRPRR---------------------------APPGGRLRFGFIGQLT 201 (359)
T ss_pred ---------------CccceEEecCCcChhhcccccc---------------------------CCCCCceEEEEEecCc
Confidence 1128999999999988764321 1135678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+ +++.+ ++|.++..... .... +..++|.|.|+++.+++..+|+.|
T Consensus 202 ~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 202 PHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred cccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999853 34444 77877642211 0111 556789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||. .||+|++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++.++.++++
T Consensus 264 ----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 339 (359)
T cd03823 264 ----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG 339 (359)
T ss_pred ----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999997 7999999999999999999999999999999988999999999999999999999999999999998
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHc
Q 002660 482 GLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 482 ~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+++..+. +.++++++++|++
T Consensus 340 ~~~~~~~---~~~~~~~~~~~~~ 359 (359)
T cd03823 340 IEPPRSI---EDQAEEYLKLYRS 359 (359)
T ss_pred HHHhhhH---HHHHHHHHHHhhC
Confidence 8877643 8899999988863
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=279.50 Aligned_cols=242 Identities=17% Similarity=0.246 Sum_probs=182.3
Q ss_pred CeEEEEEecCCCCc------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceE
Q 002660 612 KHIFVISVDCDSTT------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 612 ~kli~~DiDGTL~~------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I 685 (895)
+.+|++|+||||.. ..++.+.+++++++++ |+.|++||||++.++.++++++++. .|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceE
Confidence 35899999999953 4567888888888887 5899999999999999999999884 5788999999999
Q ss_pred eeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHH
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVK 765 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 765 (895)
++.+ ....+..|...+...|..+.+..+...+....... ......+|+++..........++
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~k~~~~~~~~~~~~~~~ 136 (249)
T TIGR01485 75 YYGG------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELKPQP------------DLEQRPHKVSFFLDPEAAPEVIK 136 (249)
T ss_pred EeCC------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccccCC------------ccccCCeeEEEEechhhhhHHHH
Confidence 9754 23456788888888887544444332222211111 11245788877753222122245
Q ss_pred HHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC-cceEEEecCc
Q 002660 766 ELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG-VHKTVILKGI 844 (895)
Q Consensus 766 ~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~-ag~gVaMgNa 844 (895)
++.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|||+||
T Consensus 137 ~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 137 QLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECCC
Confidence 566666665666777788775 9999999999999999999999999999999 666667 7 999998 7799999999
Q ss_pred cccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 845 CSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 845 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
. .+.|..++. .+.+ ..|+|+.+.++||++||+||||+
T Consensus 213 ~--~~~k~~~~~---------~~~~-~~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 213 Q--EELLQWYDE---------NAKD-KIYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred H--HHHHHHHHh---------cccC-cEEEecCCCcHHHHHHHHHcCCC
Confidence 9 656655431 0122 44688999999999999999985
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=295.43 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=182.2
Q ss_pred cccCeEEEEEecCCCCc-----chhHH-HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 609 RRRKHIFVISVDCDSTT-----GLLDA-TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~-----~~~~~-~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
..++.+|++||||||.. ..+.. ....+++++++ |+.|++||||++.++.++++++++. .||++||+||
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nG 79 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVG 79 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCC
Confidence 34577999999999942 23323 33333666666 6999999999999999999999884 5899999999
Q ss_pred ceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCc
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP 762 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 762 (895)
++|++.+ ....+..|...+...|....+.+.+..++....+ ....+..+|++++..+.....
T Consensus 80 t~I~~~~------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q------------~~~~~~~~Ki~~~~~~~~~~~ 141 (413)
T PLN02382 80 TEIAYGE------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKLQ------------PETEQRPHKVSFYVDKKKAQE 141 (413)
T ss_pred cEEEeCC------CCccChhHHHHHhccCChhhHHHHHhcCCCcccC------------CcccCCCeEEEEEechHHhHH
Confidence 9999864 4456788999999999865554444444322211 112356788888764222112
Q ss_pred cHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcc-eE
Q 002660 763 PVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVH-KT 838 (895)
Q Consensus 763 ~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~---gi~~~~viaf~Gd~nn~D~~eMl~~ag-~g 838 (895)
..+.+.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++ |+++++++| +||+.| | ++||+.+| +|
T Consensus 142 ~~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~g 217 (413)
T PLN02382 142 VIKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYG 217 (413)
T ss_pred HHHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCE
Confidence 234455555554566788888886 9999999999999999999999 999999999 777777 7 99999999 89
Q ss_pred EEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 839 VILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 839 VaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
|||+||. .++|..+.+. ...++. .+.+++++++||++||+||+|+
T Consensus 218 vam~NA~--~elk~~a~~~-------~~~~~~-~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 218 VMVSNAQ--EELLQWYAEN-------AKDNPK-IIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEEcCCc--HHHHHHHHhh-------ccCCCc-EEEcCCCCccHHHHHHHHhCCC
Confidence 9999999 6667654330 111222 2356788999999999999987
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=282.83 Aligned_cols=283 Identities=30% Similarity=0.443 Sum_probs=226.7
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|+. ...+.+..+++..++|++++.|+.......... +.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------------~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------------LLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh---------------hHHH--HHHHHHhcCCeEEe
Confidence 68999999975 456666777788899999999987654321100 1111 24567899999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.|+...+.+...+ .. ..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~~---------------------~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--ID---------------------PEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--CC---------------------CCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998877765542 11 12899999999998887543110
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
. .+.....+++.++++|++.+.||++.++++++.+.+. .+++.+ ++|.++. ...+...++++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122345678999999999999999999999998643 445555 6777654 2445566778888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.+.|+++.+++..+|+.| |++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++++|.+++++++. ++..++++.+ ++|+|+.+++++.++++++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777777777 6999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=283.64 Aligned_cols=245 Identities=12% Similarity=0.108 Sum_probs=156.5
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 5899999999993 56889999999999998 59999999999999999999999841 1258999999999964
Q ss_pred cCCCC--CCCcccchh-h-HHHhhc-c-----cCcc-------hHHHHHHhhhhhccccccccCCcccccccccCCceEE
Q 002660 689 TLNSE--DGPFVVDFY-Y-HSHIEY-R-----WGGE-------GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 751 (895)
Q Consensus 689 ~~~~~--~~~~~~~~~-~-~~~i~~-~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 751 (895)
..... ...+..+.. . ...... . +..+ ...... .......... .....+.+........|+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~k~ 154 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYT-VHESFLTGIP--LVFREVEKMDPNLQFPKV 154 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhH-HHhhhhccCC--ccccchhhccccCCceEE
Confidence 21110 000100000 0 000000 0 0000 000000 0000000000 000000000001123343
Q ss_pred EEEeeCCCCCccHHHHHHHHHh-ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccc
Q 002660 752 AFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEG 830 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~e 830 (895)
.+. .++ ..++++.+.+.. ....+.++.+.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | ++
T Consensus 155 ~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~ 226 (270)
T PRK10513 155 MMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D-IA 226 (270)
T ss_pred EEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HH
Confidence 332 111 122344344432 2234667777775 9999999999999999999999999999999 777777 7 99
Q ss_pred cccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 831 LLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 831 Ml~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
||+.+|+||||+||. +++|+.|++ ||.++++|||+++|++|.
T Consensus 227 Ml~~ag~~vAm~NA~--~~vK~~A~~-----------------vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 227 MIEYAGVGVAMGNAI--PSVKEVAQF-----------------VTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHhCCceEEecCcc--HHHHHhcCe-----------------eccCCCcchHHHHHHHHh
Confidence 999999999999999 555666555 999999999999999985
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=281.63 Aligned_cols=234 Identities=17% Similarity=0.163 Sum_probs=157.5
Q ss_pred cCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+|++|||||| .+.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||++|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 3689999999999 356899999999999998 6999999999999999999999984 3799999999998
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh---cccccccc-----------CC--------c-ccccccc
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-----------GE--------K-VLTPAEQ 744 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----------~~--------~-~~~~~~~ 744 (895)
.+. .. ....+..+.+..++...... ........ .. . .......
T Consensus 74 ~~~------~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (264)
T COG0561 74 GGE------LL--------FQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAE 139 (264)
T ss_pred CCc------EE--------eeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhh
Confidence 731 11 01111112222222111100 00000000 00 0 0000000
Q ss_pred cCCceEEEEEeeCCCCCccHHHHHHHHHhccC--eEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC
Q 002660 745 LSTNYCYAFSVQKPGMTPPVKELRKVLRIQAL--RCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE 822 (895)
Q Consensus 745 ~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd 822 (895)
....++...... .....++.+.+..... ...+..+.+. ++||+|+|+|||.||++|+++||++++++|| +||
T Consensus 140 -~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fGD 213 (264)
T COG0561 140 -LEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FGD 213 (264)
T ss_pred -cCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eCC
Confidence 000111111111 1233455555554322 3444444443 5999999999999999999999999999999 777
Q ss_pred CCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 823 SGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 823 ~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
+.| | ++||+.+|+|||||||. ++.|+.|++ +|.++++|||+++|+++.++
T Consensus 214 ~~N-D-~~Ml~~ag~gvam~Na~--~~~k~~A~~-----------------vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 214 STN-D-IEMLEVAGLGVAMGNAD--EELKELADY-----------------VTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred ccc-c-HHHHHhcCeeeeccCCC--HHHHhhCCc-----------------ccCCccchHHHHHHHHHhcc
Confidence 777 7 99999999999999998 555666554 99999999999999999875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=284.27 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=159.4
Q ss_pred CeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|||++|+|||| .+.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 589999999999 356899999999999998 5999999999999999999999983 47999999999964
Q ss_pred cCCCCCCCcccchhhHHHhhcc--------------cCc-chHHHHHHhhhhhccccccccCCcccccccccCCceEEEE
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYR--------------WGG-EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 753 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 753 (895)
..................+... |.. .................. ...+.+. .....+|+.+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~ki~~ 148 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ----LIDLKRL-PAHGVTKICF 148 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE----EecHHHc-cccCceEEEE
Confidence 3211000000000000001000 000 000000000000000000 0000000 0123455544
Q ss_pred EeeCCCCCccHHHHHHHHHhc-cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccc
Q 002660 754 SVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 832 (895)
Q Consensus 754 ~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl 832 (895)
.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | ++||
T Consensus 149 ~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~Ml 220 (272)
T PRK15126 149 CG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REML 220 (272)
T ss_pred EC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHHH
Confidence 32 22 2334555555432 334666777665 9999999999999999999999999999999 777777 7 9999
Q ss_pred cCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 833 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 833 ~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
+.+|+|||||||. +++|..|++ ..||.++++|||+++|++|-
T Consensus 221 ~~ag~~vAm~Na~--~~vK~~A~~---------------~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 221 GSVGRGFIMGNAM--PQLRAELPH---------------LPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHcCCceeccCCh--HHHHHhCCC---------------CeecCCCcchHHHHHHHHHh
Confidence 9999999999999 666666653 13788999999999999874
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=265.72 Aligned_cols=233 Identities=21% Similarity=0.382 Sum_probs=170.4
Q ss_pred EEEEEecCCCCcc---hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDSTTG---LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~~~---~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++|+||||... +++.+ ++++ +++ +|+.|++||||++.++.++++.+++. .||++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 5899999999532 33333 4544 344 47999999999999999999999983 47899999999998754
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHH
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 770 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 770 (895)
....+..|...+...|....+...+...++...+. ......+++.|... ++....++++.+.
T Consensus 72 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~-~~~~~~~~~~~~~ 133 (236)
T TIGR02471 72 -----ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTLQD------------DQEQGPFKISYLLD-PEGEPILPQIRQR 133 (236)
T ss_pred -----CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCC------------hhcCCCeeEEEEEC-cccchHHHHHHHH
Confidence 22334557666666776544444333332211111 11234677777653 3322345566677
Q ss_pred HHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccc
Q 002660 771 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 850 (895)
Q Consensus 771 l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~ 850 (895)
+......+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .++
T Consensus 134 l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~~~ 207 (236)
T TIGR02471 134 LRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--PEL 207 (236)
T ss_pred HHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--HHH
Confidence 7665555677777775 8999999999999999999999999999999 667677 7 99999999999999999 666
Q ss_pred cccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 851 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 851 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
|..++. ...|||++.+++||+++|++|++
T Consensus 208 k~~a~~-------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 208 EGLRHQ-------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHhhcC-------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 666552 12268999999999999999985
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-29 Score=276.81 Aligned_cols=265 Identities=18% Similarity=0.209 Sum_probs=196.8
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhH---HHHHH-HhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKL---EQLLK-QARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.++|+||++..... ..+....++|.+.+.|+.....+ ..... .+...........+..++ .|+..++.+|.
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 57999998764221 12224568999999997532211 11111 111111111112222232 36677999999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 298 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 298 (895)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888877554432 568999999998876421
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
...++++++||+.+.||++.+++|++.+. .++ +++|+++.. .++.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~-----------~~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPEL-----------DRLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhH-----------HHHHh-----
Confidence 23567999999999999999999999873 344 578887642 22222
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 458 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~ 458 (895)
+..++|.|+|+++.+++.++|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++++++|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 445789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 498 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~ 498 (895)
++++++|.+++++++ .++++.++.+++|+|+++.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2334455555789999988765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=287.17 Aligned_cols=313 Identities=15% Similarity=0.133 Sum_probs=232.6
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|.+|.+...+++..+.+.. ..++.+..|-.++..- ++. ...+... -...+-.||.|...|
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e--~f~-----------~lp~r~~---il~gll~~dligF~t 191 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSE--IYR-----------TLPWRRE---LLEGLLAYDLVGFQT 191 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChH--HHh-----------hCCcHHH---HHHHHhcCCEEEECC
Confidence 4899999998888888887664 4688899997654321 110 0111111 224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhH-hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARI-KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...++.+.... .+.|+.+. ..++...|+.. ++.++|||||++.|.+..... .......
T Consensus 192 ~~~~~~Fl~~~-------~~~l~~~~~~~~~~~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~ 250 (456)
T TIGR02400 192 YDDARNFLSAV-------SRELGLETLPNGVESGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIA 250 (456)
T ss_pred HHHHHHHHHHH-------HHHhCCcccCCceEECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765432 22333222 34566556655 899999999999997543111 0111111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EE-----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IM-----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-iv-----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++..+ +++++|+++||+++.||++.+++||+.+.+..+.. ++++ ++ |+++.++.+++..++..++++..
T Consensus 251 ~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 251 ELRESL--KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHHHc--CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 222222 47789999999999999999999999987555543 3443 33 34455566666666666666666
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccCCCe
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 450 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~~~g 450 (895)
.+..++.+.+++.+.++.+++.++|+.| ||+|+||.+||||++++||||||+| +|+|..+|..+.+. +|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~g 401 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GA 401 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---Cc
Confidence 6677777888889999999999999999 9999999999999999999999999 88888777766663 79
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 451 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++|+|+|++++|++|.++++ ++++++++.+..++.+.+||+..|+++|++.+.
T Consensus 402 llVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 402 LLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999999999999 557788888889999988999999999998764
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=293.38 Aligned_cols=237 Identities=12% Similarity=0.080 Sum_probs=157.6
Q ss_pred cccCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCC-------EEE
Q 002660 609 RRRKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD-------AFI 678 (895)
Q Consensus 609 ~~~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d-------~~I 678 (895)
+-..|+||+|||||| .+.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++|
T Consensus 305 ~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I 378 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGV 378 (580)
T ss_pred ccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEE
Confidence 446799999999999 356899999999999998 5999999999999999999999873 123 356
Q ss_pred EcCCceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhh---------------------------hhhccccc
Q 002660 679 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRW---------------------------ASQVTDKK 731 (895)
Q Consensus 679 ~~nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------------------~~~~~~~~ 731 (895)
|+||+.|++..++.. .... +..+.+.+++... ........
T Consensus 379 ~~NGA~I~d~~g~~I-~~~~------------L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~ 445 (580)
T PLN02887 379 FLQGLLVYGRQGREI-YRSN------------LDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPK 445 (580)
T ss_pred eecCeEEEECCCcEE-EEEe------------CCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccc
Confidence 779999986432110 0000 0001111111000 00000000
Q ss_pred cccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHh-ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhC
Q 002660 732 AESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG 810 (895)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~g 810 (895)
......+.+........|+.+.. .++ ...+.+.+.+.. ....+.++.+.+. ++||+|+|+|||.||++||+++|
T Consensus 446 -~~~i~~l~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lG 520 (580)
T PLN02887 446 -AEIMSSVDQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLG 520 (580)
T ss_pred -ccccCCHHHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcC
Confidence 00000000000011234444332 111 112234444432 2345777888776 99999999999999999999999
Q ss_pred CCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 811 VELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 811 i~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
|+++++|| +||+.| | ++||+.+|+|||||||. +++|+.|++ ||.++++|||+++|++|
T Consensus 521 I~~eeviA-FGDs~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad~-----------------VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 521 VSPDEIMA-IGDGEN-D-IEMLQLASLGVALSNGA--EKTKAVADV-----------------IGVSNDEDGVADAIYRY 578 (580)
T ss_pred CCHHHEEE-Eecchh-h-HHHHHHCCCEEEeCCCC--HHHHHhCCE-----------------EeCCCCcCHHHHHHHHh
Confidence 99999999 666667 7 99999999999999999 555666555 99999999999999987
Q ss_pred C
Q 002660 891 G 891 (895)
Q Consensus 891 ~ 891 (895)
-
T Consensus 579 ~ 579 (580)
T PLN02887 579 A 579 (580)
T ss_pred h
Confidence 3
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=282.25 Aligned_cols=281 Identities=18% Similarity=0.199 Sum_probs=210.4
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.++||+|++.......+ .+.....+|.++++|+...... ....... .+. ..+.......+.+|.||++
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~-------~~~~~~~--~~~--~~y~~~~~~~~~~D~iI~~ 277 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSES-------ATNETYI--LWN--NYYEYQFSNADYIDFFITA 277 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCc-------cCcchhH--HHH--HHHHHHHhchhhCCEEEEC
Confidence 56999999876322222 3445558999999997432111 0000000 010 1110011246788999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+...++. ++.+..++.+||+|++...+.+..
T Consensus 278 S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~----------------------- 315 (500)
T TIGR02918 278 TDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ----------------------- 315 (500)
T ss_pred CHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc-----------------------
Confidence 98777766554432 112223899999998755443211
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
...+..|+++||+.+.||++.+|+|+..+.+ ..+++.+ ++|+|+. ..++.++++.+++.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~ 375 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQAQ 375 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcCCC
Confidence 1234679999999999999999999999864 3345554 7898864 35677888889999
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCC----
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPH---- 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~---- 456 (895)
++|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |+.|+|.++.+|++++++
T Consensus 376 ~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc
Confidence 999999963 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 457 D----QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 457 d----~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
| ++++|++|.++++ ++.++++++++++.+++|||+.++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999994 5678999999999889999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-28 Score=268.64 Aligned_cols=336 Identities=23% Similarity=0.245 Sum_probs=240.8
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.++++.+++++|.+.| |+|++++........... ..... .......
T Consensus 11 ~gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~~~~~----------------------~~~~~--~~~~~~~----- 59 (353)
T cd03811 11 GGGAERVLLNLANGLDKRG--YDVTLVVLRDEGDYLELL----------------------PSNVK--LIPVRVL----- 59 (353)
T ss_pred CCCcchhHHHHHHHHHhcC--ceEEEEEcCCCCcccccc----------------------ccchh--hhceeee-----
Confidence 7899999999999999999 999999875432111000 00000 0000000
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.........+...+...+.. .+||+||+|.. ....++....+. ++|++++.|+..........
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 123 (353)
T cd03811 60 -KLKSLRDLLAILRLRRLLRK--------------EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL 123 (353)
T ss_pred -ecccccchhHHHHHHHHHHh--------------cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch
Confidence 00000111122222222222 67999999987 454444444443 89999999998654321110
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
... ..++..+..+|.+++.|+...+.+...+.. +..++.+|
T Consensus 124 ---------------~~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~----------------------~~~~~~vi 164 (353)
T cd03811 124 ---------------RLL--LLIRKLYRRADKIVAVSEGVKEDLLKLLGI----------------------PPDKIEVI 164 (353)
T ss_pred ---------------hHH--HHHHhhccccceEEEeccchhhhHHHhhcC----------------------CccccEEe
Confidence 000 235567999999999999888777665532 11289999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...+.+..... . ......++++++++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~ 220 (353)
T cd03811 165 YNPIDIEEIRALAEEP---------------------L-ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPD 220 (353)
T ss_pred cCCcChhhcCcccchh---------------------h-hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCC
Confidence 9999998876533110 0 112245678999999999999999999999999753 334
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
+.+ ++|.++. ...+...+.++++.++|.+.|. .+++.++|+.| |++|+||..|++|++++||
T Consensus 221 ~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea 283 (353)
T cd03811 221 ARLVILGDGPL-----------REELEALAKELGLADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEA 283 (353)
T ss_pred ceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHH
Confidence 443 6787764 2445577888899999999999 46899999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHH---HHHHHHHHhCHHHHHHHHHHHHHHh-hcCC
Q 002660 426 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSV---ADALLKLVADKQLWARCRQNGLKNI-HLFS 490 (895)
Q Consensus 426 ~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~l---a~ai~~ll~~~~~~~~~~~~~~~~~-~~~s 490 (895)
|+||+|||+++.|+..|++.++.+|++++++|.+++ .++|..++++++.+++++.++++.+ ++|+
T Consensus 284 ~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 284 MALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999 7777788889999999999777777 5775
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-28 Score=271.92 Aligned_cols=333 Identities=15% Similarity=0.128 Sum_probs=220.4
Q ss_pred chhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccc
Q 002660 30 GQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKE 109 (895)
Q Consensus 30 G~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~ 109 (895)
|.+..+..++..|+++|+ ++|+|+|.....+ ..+. ....|++++++|. +. ......
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~~~--------~~~~-------------~~~~~v~v~r~~~-~~-~~~~~~ 71 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGSEP--------IPAL-------------LNHPSIHIHLMVQ-PR-LLQRLP 71 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCCCC--------CHHH-------------hcCCcEEEEECCC-cc-cccccc
Confidence 455678888889998873 4799998642111 0011 1124899999986 32 111111
Q ss_pred cCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 110 LLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 110 ~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.++..+ .++......+..+...+.. +..+||+||+|... ....+..+++..++|+|++.|+++... .
T Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~ 141 (371)
T PLN02275 72 RVLYAL-ALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTL----L 141 (371)
T ss_pred cchHHH-HHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHH----H
Confidence 122200 0111111111111111100 12689999998742 244566677778999999999985221 1
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
..+.... ....++..++ |+..++.+|.|+++|+...+.+.+.+ |. ++.+|
T Consensus 142 ~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~----------------------g~---~i~vi 191 (371)
T PLN02275 142 ALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW----------------------GI---RATVL 191 (371)
T ss_pred hcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc----------------------CC---CeEEE
Confidence 1121111 1122233443 77789999999999998777654322 11 37899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc-----
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----- 341 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~----- 341 (895)
|||+ .+.|.+..... . ...+...+++++||+.+.||++.+++|+..+..+
T Consensus 192 ~n~~-~~~f~~~~~~~-----------------------~-~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~ 246 (371)
T PLN02275 192 YDQP-PEFFRPASLEI-----------------------R-LRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARL 246 (371)
T ss_pred CCCC-HHHcCcCCchh-----------------------c-ccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcc
Confidence 9995 46665432110 0 0112345788999999999999999999887310
Q ss_pred ----------cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe-CCCCCCCCHHHHHHHhhcCCcEE
Q 002660 342 ----------RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVF 409 (895)
Q Consensus 342 ----------~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~el~~ly~~A~~~~dv~ 409 (895)
...+++.+ ++|+|+. .+++.++++++++.+ +.| .++++.++++.+|+.| |++
T Consensus 247 ~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a----Dv~ 310 (371)
T PLN02275 247 NESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA----DLG 310 (371)
T ss_pred ccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----CEE
Confidence 12355664 8899985 356778888899876 665 5578999999999999 999
Q ss_pred EecC---CCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 410 INPA---FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 410 v~ps---~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
|+|+ ..|+||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.+++
T Consensus 311 v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 311 VSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred EEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9863 24899999999999999999999999999999999999996 6999999998875
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=279.24 Aligned_cols=276 Identities=16% Similarity=0.219 Sum_probs=216.9
Q ss_pred CCCcEEEecccc-chhHHHHHhccCCCC-EEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSGALNVP-MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~~~~ip-~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.++|++|+++.. .++.+..+.+..+.+ +|.+.|+..... ... ...+.. ..+..++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~~----------~~~~~~-----~~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DRY----------PSGYIP-----LRRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hhc----------cccchH-----HHHHHHhcCCEEE
Confidence 567899997653 344444566666665 999999764211 000 001111 1234588999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+...+.+...|+.. .+++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~~----------------------~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPAY----------------------KEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCCc----------------------cccEEEEECCcccccccCCC---------------------
Confidence 99998888776655432 23899999999987665321
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+|+. ...+..++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 12456789999999999999999999999976555456654 6788764 345666777777
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCC-CH
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 458 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~-d~ 458 (895)
..++|.|+|+++.+++.++|+.+ ..|++++||..||+|++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 78899999999999999999863 0189999999999999999999999999999999999999998899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~ 499 (895)
++++++|.+++++++.++++++++++.+ ++|||+.+.++|.
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 6999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=267.79 Aligned_cols=271 Identities=13% Similarity=0.072 Sum_probs=195.4
Q ss_pred CCCcEEEeccc-cchhH--HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhh-cccCE
Q 002660 143 VWPVAIHGHYA-DAGDS--AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~--~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~ad~ 218 (895)
..|||||.+.+ ..++. |..++++++ |+|.++|.....+...+ ..+.+... .+++.+++ .. .+||.
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~~----llk~l~~~-----v~r~hcD~ 501 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQAF----FVKHINNW-----VTRAYCHK 501 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHHH----HHHHHHHH-----HHHhhCCE
Confidence 77999999987 56777 888999999 99999999877643332 21221111 11122221 11 12899
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 298 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 298 (895)
|+++|.... .+ . . ++....+|||.+.|.|.....
T Consensus 502 VIaPS~atq-~L-~---~-------------------------~vI~nVnGVDte~F~P~~r~~---------------- 535 (794)
T PLN02501 502 VLRLSAATQ-DL-P---K-------------------------SVICNVHGVNPKFLKIGEKVA---------------- 535 (794)
T ss_pred EEcCCHHHH-Hh-c---c-------------------------cceeecccccccccCCcchhH----------------
Confidence 999996443 21 0 0 222222699999998754211
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHh
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDK 377 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~ 377 (895)
..++++.....+.++|+||+.+.||++.||+|+..+... .+++. +|+|+|+. ..++..++.+
T Consensus 536 ----~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~--~pnvrLvIVGDGP~-----------reeLe~la~e 598 (794)
T PLN02501 536 ----EERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNE--LDGFNLDVFGNGED-----------AHEVQRAAKR 598 (794)
T ss_pred ----HHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhh--CCCeEEEEEcCCcc-----------HHHHHHHHHH
Confidence 112333333445689999999999999999999988532 34555 48899986 3456677777
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCC
Q 002660 378 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 378 ~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+++ .|.|+|. .++...+|+.+ ||||+||..|+||++++||||||+|||+++.+|. +++.++.+|+++ .|
T Consensus 599 LgL--~V~FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D 667 (794)
T PLN02501 599 LDL--NLNFLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KT 667 (794)
T ss_pred cCC--EEEecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CC
Confidence 776 4889998 56778899999 9999999999999999999999999999999985 446677788765 69
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
+++++++|.++++++.....+. ....|||+..++++++.-+
T Consensus 668 ~EafAeAI~~LLsd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 668 SEDFVAKVKEALANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred HHHHHHHHHHHHhCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 9999999999999876433222 2348999999999997643
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=271.38 Aligned_cols=451 Identities=18% Similarity=0.166 Sum_probs=291.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCC-C-----
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP-R----- 77 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~-~----- 77 (895)
|||++++.--. +=..+||..-.+..|.++|+++| ++|.|+.+.+. .+...+....+.... .
T Consensus 1 M~Il~v~~E~~---------p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF---------PFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec---------CccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 79999884443 12589999999999999999999 99999988764 222222111111000 0
Q ss_pred -CCCcccccCCCCCCeEEEecCCCCCCccccc--ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc
Q 002660 78 -NSDDFMDDMGESSGAYIIRIPFGPKDKYIAK--ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 154 (895)
Q Consensus 78 -~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~--~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~ 154 (895)
.....-+......++.+.-+... .+..+ ...+.+.+...+.. . +......+..... -. ..|||||+|+|.
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~~---~~f~r~~~~~~~~~d~~~Rf~-~-F~~a~~~~~~~~~-~~-~~pDIvH~hDWq 140 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDNP---ALFKRPDSTLYGYYDNAERFA-F-FSLAAAELAPLGL-IS-WLPDIVHAHDWQ 140 (487)
T ss_pred cceEEEEEeecccCCCcEEEecCh---hhcCccccccCCCCcHHHHHH-H-HHHHHHHHhhhcC-CC-CCCCEEEeecHH
Confidence 00000000000111333333311 22222 12233322211111 0 1111111111000 01 479999999999
Q ss_pred chhHHHHHhc----cCCCCEEEEeCCCchhhHHHHHHHhh--ccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCChHHH
Q 002660 155 AGDSAALLSG----ALNVPMLFTGHSLGRDKLEQLLKQAR--LSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEI 227 (895)
Q Consensus 155 ~~~~~~~~~~----~~~ip~v~t~H~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~ 227 (895)
++++..+++. ...+|.|+|+|++..+.......... ++..... ....+...+..++..+..||.|.++|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 9999999988 44799999999986654322111111 1111111 000011222346778999999999999999
Q ss_pred HHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCchhHHhhh
Q 002660 228 EEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PDPPIWSEIMR 306 (895)
Q Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 306 (895)
++++ .+.+....+..++.+. .++.-|-||||.+.+.|....-.. ..+..+..+ ..........+
T Consensus 221 ~Ei~--t~~~g~gl~g~l~~~~-----------~~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L~~~ 285 (487)
T COG0297 221 GEIY--TPEYGEGLEGLLSWRS-----------GKLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVALQER 285 (487)
T ss_pred Hhhc--cccccccchhhhhhcc-----------ccEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHHHHH
Confidence 9886 3444444444443332 288999999999999886543211 111111111 11222233444
Q ss_pred hcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 307 FFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 307 ~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
++.+ .+.|++.++||+..+||++.+++++..+.+. ...+ +++|.++ ..+.+.+..+.+++.. ++
T Consensus 286 ~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~--~~~~-vilG~gd---------~~le~~~~~la~~~~~--~~ 351 (487)
T COG0297 286 LGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ--GWQL-VLLGTGD---------PELEEALRALASRHPG--RV 351 (487)
T ss_pred hCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHh--CceE-EEEecCc---------HHHHHHHHHHHHhcCc--eE
Confidence 5544 3569999999999999999999999999743 3444 5778883 4566788888888765 56
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc--------CCCeEEeCCC
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--------LDNGLLVDPH 456 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--------~~~g~lv~p~ 456 (895)
.+.-..+..-...+|..| |++++||++||+|++-++||+.|+++|+..+||.+|.|.+ ..+|+++.+.
T Consensus 352 ~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~ 427 (487)
T COG0297 352 LVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT 427 (487)
T ss_pred EEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC
Confidence 665555555566777778 9999999999999999999999999999999999999875 4789999999
Q ss_pred CHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 457 DQQSVADALLKLVA---DKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 457 d~~~la~ai~~ll~---~~~~-~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
++++++.+|.+++. .++. |+.+..+++. ..|||+..+.+|.++|+.++...
T Consensus 428 ~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 428 NPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 99999999999986 4554 8888887776 79999999999999999987654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=266.48 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=157.2
Q ss_pred ccCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEe
Q 002660 610 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 686 (895)
Q Consensus 610 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 686 (895)
..+|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+.+++++++++ .+++||+||+.|+
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 467899999999993 45678899999999998 5999999999999999999999983 2479999999999
Q ss_pred eccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh-cccccc-----------ccCCc-ccccccc-cCCceEEE
Q 002660 687 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ-VTDKKA-----------ESGEK-VLTPAEQ-LSTNYCYA 752 (895)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~-~~~~~~~-~~~~~k~~ 752 (895)
............ .+ ......+.+..++...... ...... ..... ....... .....++.
T Consensus 78 ~~~~~~~~~~~~---~~----~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T PRK03669 78 LDEQWQDHPDFP---RI----ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLI 150 (271)
T ss_pred ecCcccCCCCce---Ee----ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeE
Confidence 753211000000 00 0001111122222111000 000000 00000 0000000 00122222
Q ss_pred EEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCC---CcccEEEEecCCCCCCcc
Q 002660 753 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV---ELSKMVVFVGESGDTDYE 829 (895)
Q Consensus 753 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi---~~~~viaf~Gd~nn~D~~ 829 (895)
+. . . .....++.+.+... .+.++. .+. ++||+|+++|||+||++|++++|+ +++++|| +||+.| | +
T Consensus 151 ~~-~-~--~~~~~~~~~~l~~~--~~~~~~-~~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i 219 (271)
T PRK03669 151 WR-D-S--DERMAQFTARLAEL--GLQFVQ-GAR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-A 219 (271)
T ss_pred ec-C-C--HHHHHHHHHHHHHC--CCEEEe-cCe-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-H
Confidence 21 1 1 12334556666542 355554 344 899999999999999999999999 9999999 777777 7 9
Q ss_pred ccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 830 GLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 830 eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
+||+.+|+||||||+.+..+ -++..+..++|+|...++|||+++|+||.
T Consensus 220 ~Ml~~ag~gvAM~~~~~~~~-------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 220 PLLDVMDYAVVVKGLNREGV-------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHHHhCCEEEEecCCCCCCc-------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 99999999999999872221 11223667889999999999999999973
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=259.10 Aligned_cols=225 Identities=17% Similarity=0.135 Sum_probs=153.7
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. ..+++.++++|++++++ |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 4899999999993 55789999999999987 5999999999999999999999983 57999999999975
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHH
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 768 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~ 768 (895)
... ... +...+. ....++........... ..+...........+. ... . ...+++.
T Consensus 75 ~~~----~~~----~~~~~~------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~ 130 (230)
T PRK01158 75 FDG----KRI----FLGDIE------ECEKAYSELKKRFPEAS-----TSLTKLDPDYRKTEVA-LRR-T---VPVEEVR 130 (230)
T ss_pred CCC----CEE----EEcchH------HHHHHHHHHHHhccccc-----eeeecCCcccccceee-ecc-c---ccHHHHH
Confidence 211 111 000010 11111111111000000 0000000000011111 111 1 1234555
Q ss_pred HHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccc
Q 002660 769 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848 (895)
Q Consensus 769 ~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~ 848 (895)
+.+......+.++.+ .. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||||+||. +
T Consensus 131 ~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~ 203 (230)
T PRK01158 131 ELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD--E 203 (230)
T ss_pred HHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--H
Confidence 555544434444444 33 8999999999999999999999999999999 777777 7 99999999999999999 5
Q ss_pred cccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 849 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
++|+.| ++||.++++|||+++|++|.|
T Consensus 204 ~vk~~a-----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 204 ELKEAA-----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred HHHHhc-----------------ceEecCCCcChHHHHHHHHhC
Confidence 555554 459999999999999999865
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=274.10 Aligned_cols=247 Identities=35% Similarity=0.529 Sum_probs=173.2
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCC-------Ce---eEEEEeecCccCCCCCCCCCCc
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP-------GV---YRVDLLTRQVSAPDVDWSYGEP 70 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G-------~~---h~V~v~t~~~~~~~~~~~y~~~ 70 (895)
|++ +|+++|+||++++.++ +|| ||||||..||+++|++|.+.+ |+ -+|.++|+.+.+.. ...+.++
T Consensus 271 mvf-~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 271 MVF-NVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp --S-EEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred eeE-EEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 777 9999999999999999 999 999999999999999998642 11 36999999876543 2344444
Q ss_pred ccccCCCCCCcccccCCCCCCeEEEecCCCCC----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCc
Q 002660 71 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 146 (895)
Q Consensus 71 ~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pD 146 (895)
.|.+ ..+++++|+|+||++. ++|++++.+|||+.+|++.+...+.... +.+||
T Consensus 347 le~~------------~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~-----------~~~Pd 403 (550)
T PF00862_consen 347 LEKV------------SGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAEL-----------QGKPD 403 (550)
T ss_dssp EEEE------------TTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHH-----------TS--S
T ss_pred cccc------------CCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHh-----------CCCCc
Confidence 4433 4467899999999985 3699999999999999998877765421 25799
Q ss_pred EEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHH
Q 002660 147 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQE 226 (895)
Q Consensus 147 vVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~ 226 (895)
+||+||.+++++|.+++.++|+|++++.|+++..++. .+.+.+..+...|++..++.+|..+++.||.||++|.++
T Consensus 404 lI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QE 479 (550)
T PF00862_consen 404 LIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQE 479 (550)
T ss_dssp EEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHH
T ss_pred EEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHh
Confidence 9999999999999999999999999999999998865 366688899999999999999999999999999999999
Q ss_pred HHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCC
Q 002660 227 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD 279 (895)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~ 279 (895)
++.++..++.|.....-.++. ..+.|...+++.+|+.++|||+|.+.|-|-.
T Consensus 480 I~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 480 IAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred hcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 998655444443321111111 5678888999999999999999999988765
|
4.1.13 from EC in the following reaction: |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=259.47 Aligned_cols=218 Identities=14% Similarity=0.151 Sum_probs=149.4
Q ss_pred EEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 615 FVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 615 i~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
|++|+||||. ..+++.++++|++++++ |+.|+|||||++.++.++++.+++ ++++||+||+.|++.+..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 5899999993 45788999999999998 599999999999999999999987 468999999999976421
Q ss_pred CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHH
Q 002660 692 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVL 771 (895)
Q Consensus 692 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l 771 (895)
. ..|...+...|............... .. .........++.+. . ..+.+...+
T Consensus 73 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~~~----~---~~~~~~~~~ 125 (225)
T TIGR01482 73 D--------DIFLAYLEEEWFLDIVIAKTFPFSRL--KV----------QYPRRASLVKMRYG----I---DVDTVREII 125 (225)
T ss_pred c--------eEEecccCHHHHHHHHHhcccchhhh--cc----------ccccccceEEEeec----C---CHHHHHHHH
Confidence 0 11111111111111000000000000 00 00001112222221 1 112333333
Q ss_pred HhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcccccccc
Q 002660 772 RIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQ 851 (895)
Q Consensus 772 ~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~ 851 (895)
......+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. +++|
T Consensus 126 ~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~~k 198 (225)
T TIGR01482 126 KELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PELK 198 (225)
T ss_pred HhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HHHH
Confidence 3333333333 4454 8999999999999999999999999999999 777777 8 99999999999999999 5556
Q ss_pred ccccCCCCCCCCCcCCCCceEEccCcCChHH----HHHHHHHhC
Q 002660 852 IHANRSYPLSDVMPIDSPNIVQTPEDCTTSD----IRSSLEQLG 891 (895)
Q Consensus 852 ~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dG----I~~al~~~~ 891 (895)
..|++ ||.++++|| |+++|++||
T Consensus 199 ~~A~~-----------------vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 199 EWADY-----------------VTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HhcCe-----------------ecCCCCCCcHHHHHHHHHHhhC
Confidence 66555 999999999 999999987
|
catalyze the same reaction as SPP. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=282.65 Aligned_cols=312 Identities=14% Similarity=0.092 Sum_probs=216.6
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
..|+|++|.+....++..+.++ ...|+++..|-.++..- ++. .++ .... -...+-.+|.|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e--~~~--~lp---------~~~~---ll~~~l~~D~igF~ 194 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSE--IFR--CLP---------WREE---LLRGLLGADLIGFQ 194 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChH--HHh--hCC---------ChHH---HHHHHhcCCEEEEC
Confidence 4699999998777777776654 35899999997765431 110 000 0011 11245569999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhH--hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARI--KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~--~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+...+..++.... +.++... ..++.+.|+.. ++.+||||||++.|.+..... ..
T Consensus 195 t~~~~~~Fl~~~~-------~~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~~----------------~~ 250 (460)
T cd03788 195 TERYARNFLSCCS-------RLLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAASP----------------EV 250 (460)
T ss_pred CHHHHHHHHHHHH-------HHcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcCc----------------hh
Confidence 9877666554321 1111111 13455555544 799999999999997543111 11
Q ss_pred hHHh-hhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCccccccchHHHHHHH
Q 002660 301 WSEI-MRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVLLSV 371 (895)
Q Consensus 301 ~~~~-~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~-----~~~~~~~~~~~~~~~~l 371 (895)
.... ......+++++|+++||+++.||++.+|+|++.+.+..+.+ ++++ ++|.+ +.++.++++..+..+++
T Consensus 251 ~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~i 330 (460)
T cd03788 251 QERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRI 330 (460)
T ss_pred HHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHH
Confidence 1111 11223467899999999999999999999999987544443 3444 45433 22222322222222223
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccC
Q 002660 372 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVL 447 (895)
Q Consensus 372 ~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~ 447 (895)
+...+..++.+.+++.|.++.+++.++|+.| |++|+||..||||++++||||||+| ||+|+.+|..+. +
T Consensus 331 n~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~ 403 (460)
T cd03788 331 NGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---L 403 (460)
T ss_pred HhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---c
Confidence 2222223355666778899999999999999 9999999999999999999999999 888888777776 4
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
.+|++++|+|+++++++|.++++++ ++++.+++++++.+++|||..|+++|++.+
T Consensus 404 ~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 404 SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 6899999999999999999999955 677888888888889999999999998765
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=271.97 Aligned_cols=314 Identities=12% Similarity=0.077 Sum_probs=235.0
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++-|.+|-.++..- ++. .++ +.+. -...+-.||.|-.-|
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~e--ifr--~LP---------~r~~---ll~glL~aDliGFqt 196 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSAD--VFN--ILP---------WREQ---IIGSLLCCDYIGFHI 196 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChH--HHh--hCC---------chHH---HHHHHhcCCeEEeCC
Confidence 479999998777788777664 35788889998765431 110 001 1111 224677999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhH----------------------hccccccCCCCCCEEEeCCCCCCCCCCCCCCC
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARI----------------------KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGD 281 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~ 281 (895)
...++.+.... .+.|+.+. .-+|.+.|+.+ ++.++|+|||++.|.+....
T Consensus 197 ~~y~~~Fl~~~-------~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 197 PRYVENFVDAA-------RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred HHHHHHHHHHH-------HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcC
Confidence 88877765532 22333221 11366667776 89999999999999754311
Q ss_pred CCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC----
Q 002660 282 MDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR---- 354 (895)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~---- 354 (895)
. ........+++.+ .++++|+++||+++.||+..+|+||+++.+.+|.+ ++++ ++|..
T Consensus 269 ~-------------~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~ 333 (487)
T TIGR02398 269 A-------------SIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASG 333 (487)
T ss_pred c-------------hHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCccc
Confidence 1 1112222333322 37899999999999999999999999997666655 4554 34433
Q ss_pred -CCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC---
Q 002660 355 -DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--- 430 (895)
Q Consensus 355 -~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~--- 430 (895)
+.|++++++.++..++||+...+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||++||+||+.
T Consensus 334 v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~ 409 (487)
T TIGR02398 334 MTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLD 409 (487)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCC
Confidence 556778888889999999999999999999999999999999999999 999999999999999999999966
Q ss_pred -CEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 431 -PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 431 -PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~-~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
|+|.|..+|+.+.+ ..+++|||+|++++|++|.++|++|. ++++..+..++.+..++...|++.|++.+..
T Consensus 410 GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 410 GVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred CCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 67766665555443 56999999999999999999999765 5566666667777899999999999987763
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=261.58 Aligned_cols=244 Identities=14% Similarity=0.182 Sum_probs=151.5
Q ss_pred CeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 589999999999 356889999999999998 5999999999999999999999983 36999999999964
Q ss_pred cCCCC--CCCcccchh--hHHHhhc-----------cc-CcchHHHHHH--hhhhhccccccccCCccccccc----ccC
Q 002660 689 TLNSE--DGPFVVDFY--YHSHIEY-----------RW-GGEGLRKTLV--RWASQVTDKKAESGEKVLTPAE----QLS 746 (895)
Q Consensus 689 ~~~~~--~~~~~~~~~--~~~~i~~-----------~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 746 (895)
..... ...+..+.. ....+.. .| .......... .+........ ......+.+.. ...
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQ-RPTFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhc-ccceEEcccHHHHHhhcC
Confidence 21110 000100000 0000000 00 0000000000 0000000000 00000000000 001
Q ss_pred CceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 002660 747 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 826 (895)
Q Consensus 747 ~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~ 826 (895)
..+++... .++ ....+++.+.+... ..+.+..+... ++||+|+++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12232221 111 11223344444322 22444555554 8999999999999999999999999999999 777777
Q ss_pred CccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 827 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 827 D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
| ++||+.+|+|||||||. ++.|..|+ +||+++++|||+++|++|-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~Ad-----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKARAD-----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHhCC-----------------EEEecCCCCcHHHHHHHHh
Confidence 8 99999999999999998 44454544 5999999999999999874
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=256.36 Aligned_cols=255 Identities=13% Similarity=0.093 Sum_probs=184.6
Q ss_pred eccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhh-hcccCEEEeCChHHHH
Q 002660 150 GHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELS-LDASEIVITSTRQEIE 228 (895)
Q Consensus 150 ~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~ad~vi~~s~~~~~ 228 (895)
.|.....+..+....+.|+|+|++.|+..+ +.+.+ +... .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~~--~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHTA--LYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHHH--HHHHhhccCCEEEECCHHHHH
Confidence 444445555666666779999999998421 11111 3345 6889999999998777
Q ss_pred HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc
Q 002660 229 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 308 (895)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (895)
.+.... +. . ..++.+||||+|.+.|.+....
T Consensus 108 ~l~~~g--~~-------------------~-~~~i~vIpNGVd~~~f~~~~~~--------------------------- 138 (331)
T PHA01630 108 AFYTSG--LK-------------------I-PQPIYVIPHNLNPRMFEYKPKE--------------------------- 138 (331)
T ss_pred HHHHcC--CC-------------------C-CCCEEEECCCCCHHHcCCCccc---------------------------
Confidence 653321 10 0 1289999999999888653210
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 309 TNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
..+..+++++|++.++||++.+|+|++.+.+.. +++. +++|++.. . .++ .++.+ +.
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~--~~~~llivG~~~~--~---------~~l------~~~~~---~~ 195 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEG--YDFYFLIKSSNML--D---------PRL------FGLNG---VK 195 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhhC--CCEEEEEEeCccc--c---------hhh------ccccc---ee
Confidence 123456777888999999999999999986433 4454 46775432 1 011 12222 34
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC------------
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP------------ 455 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p------------ 455 (895)
+.++.+++..+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 196 ~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~ 271 (331)
T PHA01630 196 TPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI 271 (331)
T ss_pred ccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc
Confidence 568889999999999 9999999999999999999999999999999999999999888776642
Q ss_pred -------CCHHHHHHHHHHHHhCH--HHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 456 -------HDQQSVADALLKLVADK--QLWA-RCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 456 -------~d~~~la~ai~~ll~~~--~~~~-~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
.|.+++++++.+++.++ +.++ .+.++++...++|||+.++++|+++|++
T Consensus 272 ~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 272 HVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37788999999999863 4444 4444444444799999999999999974
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=257.41 Aligned_cols=225 Identities=15% Similarity=0.196 Sum_probs=153.5
Q ss_pred EEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 615 FVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 615 i~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
||+|+|||| ...+++.++++++.++++ |+.|++||||++..+.++++++++. +++||+||+.|+....+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 366899999999999998 5999999999999999999999983 69999999999433211
Q ss_pred CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCC-----------------------c--ccccccccC
Q 002660 692 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE-----------------------K--VLTPAEQLS 746 (895)
Q Consensus 692 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~--~~~~~~~~~ 746 (895)
.. ....+..+.+..++................ . .........
T Consensus 73 -----~l--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (254)
T PF08282_consen 73 -----IL--------YEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDE 139 (254)
T ss_dssp -----EE--------EEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCS
T ss_pred -----cc--------hhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccc
Confidence 11 000011111111111111000000000000 0 000011123
Q ss_pred CceEEEEEeeCCCCCccHHHHHHHHHhcc-CeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCC
Q 002660 747 TNYCYAFSVQKPGMTPPVKELRKVLRIQA-LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGD 825 (895)
Q Consensus 747 ~~~k~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn 825 (895)
...++.+.. ++ ..++++.+.+.... ....+..+... ++||+|+++|||.||++|++++|++++++++ +||+.|
T Consensus 140 ~i~ki~~~~-~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N 213 (254)
T PF08282_consen 140 EIFKILFFP-DP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN 213 (254)
T ss_dssp SESEEEEES-CH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG
T ss_pred cceeeeccc-cc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc
Confidence 456666432 22 24455555565432 22466777776 9999999999999999999999999999999 666666
Q ss_pred CCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 826 TDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 826 ~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
| ++||+.+|+||||+||. .+.|..|++ +|.++++|||+++|
T Consensus 214 -D-~~Ml~~~~~~~am~na~--~~~k~~a~~-----------------i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 214 -D-IEMLELAGYSVAMGNAT--PELKKAADY-----------------ITPSNNDDGVAKAI 254 (254)
T ss_dssp -G-HHHHHHSSEEEEETTS---HHHHHHSSE-----------------EESSGTCTHHHHHH
T ss_pred -c-HhHHhhcCeEEEEcCCC--HHHHHhCCE-----------------EecCCCCChHHHhC
Confidence 6 99999999999999999 666777666 99999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=258.74 Aligned_cols=325 Identities=17% Similarity=0.194 Sum_probs=210.5
Q ss_pred CCCcEEEeccccchhHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHHhhc---------cHHHHHhhhhhhHHHHHHHhh
Q 002660 143 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARL---------SRDEINATYKIMRRIEAEELS 212 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~~ 212 (895)
.++||+|+|.|.++..+..+. +..++|+|+|.|....-.. +..|.. ..........+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999998888 5678999999997643221 111110 001111123344555568899
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
...||.++++|+.+..+....|+ ++.++ |||||+|.+.|.+...-.. .
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~----------------------~~pd~--ViPNGid~~~f~~~~e~~~--~------ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLK----------------------RKPDV--VLPNGLNVKKFSALHEFQN--L------ 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhC----------------------CCCCE--EeCCCcchhhcccchhhhh--h------
Confidence 99999999999988888776654 33334 9999999999975431100 0
Q ss_pred CCCCCCchhH-----HhhhhcCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EE-EecC---CC
Q 002660 293 PASPDPPIWS-----EIMRFFTNPRKPVILA-LARPDP-KKNITTLVKAFGECRPL----RELANLT-LI-MGNR---DG 356 (895)
Q Consensus 293 ~~~~~~~~~~-----~~~~~~~~~~~~~il~-vgrl~~-~Kgi~~ll~A~~~l~~~----~~~~~l~-li-vG~~---~~ 356 (895)
.......... .+.++..++++++++| +||+.+ .||++.+|+|+.++... ..+-.++ ++ +... -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 0001111111 2333455677888888 799998 99999999999998531 1112232 33 3221 11
Q ss_pred ccccccch-----HHHHHH------------------------------------------------------------H
Q 002660 357 IDEMSSTS-----ASVLLS------------------------------------------------------------V 371 (895)
Q Consensus 357 ~~~~~~~~-----~~~~~~------------------------------------------------------------l 371 (895)
.+.++.+. ++-... +
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 11121110 111111 1
Q ss_pred HHHHHhcCCC----C--cEEeC-CCCC------CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC
Q 002660 372 LKLIDKYDLY----G--QVAYP-KHHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 438 (895)
Q Consensus 372 ~~~~~~~~l~----~--~v~~~-g~~~------~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g 438 (895)
...+.+.+|. + +|.|+ .+++ ..+..++|+.| |++|+||++||||++++||||||+|+|+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 1122222221 1 13333 2222 23588999999 99999999999999999999999999999999
Q ss_pred Cc----hhccccC-CCeEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHc
Q 002660 439 GP----VDIHRVL-DNGLLVD-------PHDQQSVADALLKLVADKQLWARCRQNGL--KNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 439 g~----~eiv~~~-~~g~lv~-------p~d~~~la~ai~~ll~~~~~~~~~~~~~~--~~~~~~s~~~~a~~~~~~~~~ 504 (895)
|+ .|++.++ ..|++|. +.++++++++|.+++.. +.++++..++. +..+.|+|++.+..|.+.+.-
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88 5665444 3577776 45678899999998854 45565555554 555799999999999999987
Q ss_pred ccC
Q 002660 505 CKP 507 (895)
Q Consensus 505 ~~~ 507 (895)
.++
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 654
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=252.82 Aligned_cols=236 Identities=19% Similarity=0.129 Sum_probs=151.7
Q ss_pred EEEEEecCCCC--cc-hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDST--TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~--~~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++|+||||. .. ..+.+++++++++++ |+.|+|||||++..+.++++++++ ++++||+||++|++.++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 58999999993 22 445689999999998 599999999999999999999998 36899999999998643
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhc---ccc--ccc-------cCCc-ccccccccCCceEEEEEeeC
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV---TDK--KAE-------SGEK-VLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~--~~~-------~~~~-~~~~~~~~~~~~k~~~~~~~ 757 (895)
... .+..| .....|..+.+..+++.+.... ... ... .... ............++.+. +
T Consensus 73 ~~~-----~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 143 (256)
T TIGR01486 73 WFT-----EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW--S 143 (256)
T ss_pred ccc-----CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec--C
Confidence 210 00001 0112222233333332211100 000 000 0000 00000000112222222 2
Q ss_pred CCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc
Q 002660 758 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 758 ~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~--~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
+ ...+.+.+.+...+ +.++.+ .. ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||+.+
T Consensus 144 ~---~~~~~~~~~~~~~~--~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~~a 213 (256)
T TIGR01486 144 E---ERRERFTEALVELG--LEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLEVV 213 (256)
T ss_pred h---HHHHHHHHHHHHcC--CEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHHHC
Confidence 2 23445556665432 444554 34 8999999999999999999999999 999999 777777 7 9999999
Q ss_pred ceEEEecCcccc-ccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 HKTVILKGICSS-SSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 g~gVaMgNa~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
|+||||+||.+. .++|... +..+|||+++++|||+++|+||
T Consensus 214 g~~vam~Na~~~~~~lk~~~--------------~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 214 DLAVVVPGPNGPNVSLKPGD--------------PGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred CEEEEeCCCCCCccccCccC--------------CCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999832 2223220 0134799999999999999987
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-26 Score=252.81 Aligned_cols=345 Identities=16% Similarity=0.143 Sum_probs=239.2
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
||||++++ ...||.+....+|+++|.++| |+|++++.... +. .+..
T Consensus 1 ~~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~--------~~~~-------- 46 (357)
T PRK00726 1 MKKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARG-ME--------ARLV-------- 46 (357)
T ss_pred CcEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh--------hhcc--------
Confidence 37999886 345799999999999999999 99999987431 00 0000
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~ 162 (895)
...|+++++++..... ....+..+..+. ..+..+.+..+.+++ .+|||||+|.+..++.+..+
T Consensus 47 -----~~~g~~~~~~~~~~~~----~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~ 109 (357)
T PRK00726 47 -----PKAGIEFHFIPSGGLR----RKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLA 109 (357)
T ss_pred -----ccCCCcEEEEeccCcC----CCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHH
Confidence 0137888888753320 000011111111 112222222222222 68999999987666677777
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|++.|+..+.. .+++..+.+|.++++++.... . ...
T Consensus 110 ~~~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~~---~----~~~--- 153 (357)
T PRK00726 110 ARLLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAFP---E----FFK--- 153 (357)
T ss_pred HHHcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhhh---c----cCC---
Confidence 7888999999887643211 022346678999988874321 1 111
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.++|||+|.+.+.+.. . ..++...++.++|+++|+.
T Consensus 154 ------------------~~i~vi~n~v~~~~~~~~~--~---------------------~~~~~~~~~~~~i~~~gg~ 192 (357)
T PRK00726 154 ------------------PKAVVTGNPVREEILALAA--P---------------------PARLAGREGKPTLLVVGGS 192 (357)
T ss_pred ------------------CCEEEECCCCChHhhcccc--h---------------------hhhccCCCCCeEEEEECCc
Confidence 3899999999987664311 0 0122234567889999998
Q ss_pred CCCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLV-KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll-~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
...|++..++ +|+.++.. . +...+++|+++. +++....+ +++. |.|.|++ +++..+|..
T Consensus 193 ~~~~~~~~~l~~a~~~~~~-~--~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~ 252 (357)
T PRK00726 193 QGARVLNEAVPEALALLPE-A--LQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAA 252 (357)
T ss_pred HhHHHHHHHHHHHHHHhhh-C--cEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHh
Confidence 8888876655 99988853 1 333346788752 33444444 5653 8999996 789999999
Q ss_pred hhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC--------chhccccCCCeEEeCCCC--HHHHHHHHHHHHhC
Q 002660 402 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVAD 471 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg--------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~ 471 (895)
| |++|.++ .+++++|||+||+|+|++..++ ..+.+.+.+.|+++++.| +++++++|.+++++
T Consensus 253 ~----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 253 A----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred C----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC
Confidence 9 9999876 2689999999999999987643 235677778999998888 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 472 KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++.++++++++++..+.++.+.+++.+++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999999998889999999999988765
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=241.07 Aligned_cols=221 Identities=12% Similarity=0.158 Sum_probs=163.9
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
+...+.+|++|+...+.+.+. |+ +. .+ +|++|+|++.|.+.....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~-----~~-~i-~I~~GVD~~~f~p~~~~~---------- 134 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GL-----QV-DL-PVFHGINFKIVENAEKLV---------- 134 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CC-----CC-ce-eeeCCCChhhcCccchhh----------
Confidence 445668999998877765432 11 11 33 478999999987633100
Q ss_pred CCCCCCchhHHhhhhcCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCccccccchHHHH
Q 002660 293 PASPDPPIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVL 368 (895)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~~~~~~~~~~~~~~~ 368 (895)
...+.++... ++.++++++||+.++||++.+++|++.+.+..+.+ ++.+ ++|.
T Consensus 135 --------~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--------------- 191 (335)
T PHA01633 135 --------PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH--------------- 191 (335)
T ss_pred --------HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH---------------
Confidence 0111222221 46788999999999999999999999986544432 3454 4442
Q ss_pred HHHHHHHHhcCCCCcEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccc
Q 002660 369 LSVLKLIDKYDLYGQVAYP---KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 445 (895)
Q Consensus 369 ~~l~~~~~~~~l~~~v~~~---g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~ 445 (895)
....++++.++|.|. |+++.+++.++|+.| |++|+||..||||++++||||||+|||+++.|+..|++.
T Consensus 192 ----~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g 263 (335)
T PHA01633 192 ----KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTS 263 (335)
T ss_pred ----HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecC
Confidence 123456677889998 556778999999999 999999999999999999999999999999999888643
Q ss_pred c------------------CCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 002660 446 V------------------LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 500 (895)
Q Consensus 446 ~------------------~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~ 500 (895)
+ ...|+++++.|+++++++|.++++..+ ...+++++++.+++|+|+.++++|++
T Consensus 264 ~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 264 WQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 1 234678888999999999999976432 33347778888899999999999863
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-26 Score=255.81 Aligned_cols=274 Identities=24% Similarity=0.307 Sum_probs=209.7
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.++|+++++....... ..+......+.++++|+.......... .. .+...+ +. ....++.+|.|+++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~-----~~~~~~---~~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV-HS-----LINNFY---EY---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc-cc-----ccchhh---HH---HHhChhhCCEEEEc
Confidence 5699999998644333 233334466788999975322210000 00 001111 11 12346889999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+...++.. .++.+||+|++...+.+...
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccch----------------------
Confidence 998887776654321 15899999999887754210
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
....++.++++||+.+.||++.+|+|+..+.+..+...+ +++|.++. ...+...+..+++.+
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~ 261 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATL-DIYGYGDE-----------EEKLKELIEELGLED 261 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEE-EEEEeCch-----------HHHHHHHHHHcCCcc
Confidence 123467899999999999999999999998644444444 36787764 234556667888889
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHH
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSV 461 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~l 461 (895)
+|.|.|+ .+++.++|+.| |++|+||..||||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++
T Consensus 262 ~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~l 335 (372)
T cd04949 262 YVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEAL 335 (372)
T ss_pred eEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHH
Confidence 9999995 67899999999 99999999999999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 002660 462 ADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 498 (895)
Q Consensus 462 a~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~ 498 (895)
+++|.+++++++.+++++.++++..++|||+.++++|
T Consensus 336 a~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 336 AEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999999999999999999999998899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=249.10 Aligned_cols=226 Identities=14% Similarity=0.109 Sum_probs=149.6
Q ss_pred EEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++||||||. +.+++.+.+++++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.+.
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 58999999993 56889999999999998 5999999999999999999999883 3799999999997632
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccc-----ccc--c----------------cCCcccccc--ccc
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD-----KKA--E----------------SGEKVLTPA--EQL 745 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~--~----------------~~~~~~~~~--~~~ 745 (895)
... .... +..+.+..++..+...... ... . .....+... ...
T Consensus 73 ~~i-~~~~------------i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR00099 73 EIL-YKKP------------LDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPD 139 (256)
T ss_pred CEE-eecC------------CCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhc
Confidence 110 0000 0111111111110000000 000 0 000000000 000
Q ss_pred CCceEEEEEeeCCCCCccHHHHHHHHHh--ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCC
Q 002660 746 STNYCYAFSVQKPGMTPPVKELRKVLRI--QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES 823 (895)
Q Consensus 746 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~ 823 (895)
....++.+. .++ ...+++.+.+.. ....+.+..+.+. ++||+|+++|||.||+++++++|++++++++ +||+
T Consensus 140 ~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~ 213 (256)
T TIGR00099 140 DILKILLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDG 213 (256)
T ss_pred ccceEEEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCc
Confidence 112222222 111 123455555542 2344667777775 9999999999999999999999999999999 7777
Q ss_pred CCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 824 GDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 824 nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
.| | ++||+.+|.+|||+||. .++|..|+ ++|.++++|||+++|
T Consensus 214 ~n-D-~~m~~~~~~~~a~~na~--~~~k~~a~-----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 214 MN-D-IEMLEAAGYGVAMGNAD--EELKALAD-----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HH-h-HHHHHhCCceeEecCch--HHHHHhCC-----------------EEecCCCCcchhhhC
Confidence 77 7 99999999999999998 44555554 499999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=256.13 Aligned_cols=317 Identities=15% Similarity=0.134 Sum_probs=242.1
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++-|.+|-.++..- ++. ...+.+. -...+-.+|.|-.-|
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~e--ifr-----------~LP~r~e---il~glL~aDlIGFqt 187 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPE--IFN-----------ALPPHDE---LLEQLCDYDLLGFQT 187 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChH--HHh-----------hCCChHH---HHHHHHhCccceeCC
Confidence 489999998777777777654 45788999998765431 110 0001111 124677899999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhHhc--cccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARIKR--NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
...++.+.... .+.|+.+... .+...|+.+ ++.++|.|||++.|...... +.....
T Consensus 188 ~~y~rnFl~~~-------~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~ 245 (474)
T PRK10117 188 ENDRLAFLDCL-------SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKL 245 (474)
T ss_pred HHHHHHHHHHH-------HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHH
Confidence 98877665432 2223322211 244456666 89999999999998743211 011122
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~~~l~~ 373 (895)
..++... .++++|+.++|+|+.||+...++||+++++.+|.+ +++++ + ++.++|++++++.++.+++||+
T Consensus 246 ~~lr~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 246 AQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred HHHHHHc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 2333322 46889999999999999999999999998777766 44442 2 4456778889999999999999
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc------CCCEEEcCCCCchhccccC
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH------GLPIVATKNGGPVDIHRVL 447 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~------G~PVvas~~gg~~eiv~~~ 447 (895)
..++.+|.+..++...++++++.++|+.| ||+++||++||||||++||+|| |+.|+|..+|++.++
T Consensus 324 ~fg~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L---- 395 (474)
T PRK10117 324 KYGQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---- 395 (474)
T ss_pred ccCCCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----
Confidence 99999999999999999999999999999 9999999999999999999999 778899999999888
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
..+++|||+|.+++|+||.++|++| +++++..+..++.+..++...|++.|++.+..+..+.
T Consensus 396 ~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~~ 458 (474)
T PRK10117 396 TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRS 458 (474)
T ss_pred CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhcC
Confidence 4699999999999999999999965 5566666667777799999999999999999875443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=236.41 Aligned_cols=211 Identities=15% Similarity=0.179 Sum_probs=146.5
Q ss_pred eEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeecc
Q 002660 613 HIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 613 kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
|+|++|+||||. +.+++.+.++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 799999999993 56889999999999997 5999999999999999999999883 479999999999864
Q ss_pred CCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHH
Q 002660 690 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 769 (895)
Q Consensus 690 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~ 769 (895)
.. .. +.. ....|........ .+....... ........... .. ...+.+.+
T Consensus 74 ~~-----~~----~~~-~~~~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~-~~---~~~~~~~~ 123 (215)
T TIGR01487 74 ED-----IF----LAN-MEEEWFLDEEKKK--RFPRDRLSN--------------EYPRASLVIMR-EG---KDVDEVRE 123 (215)
T ss_pred Cc-----EE----Eec-ccchhhHHHhhhh--hhhhhhccc--------------ccceeEEEEec-CC---ccHHHHHH
Confidence 21 10 000 0000000000000 000000000 00011111221 11 22345555
Q ss_pred HHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcccccc
Q 002660 770 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849 (895)
Q Consensus 770 ~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~ 849 (895)
.+... .+.+..+ +. ++||+|.++|||.||+++++++|++.+++++ +||+.| | ++||+.+|+||||+||. ++
T Consensus 124 ~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~--~~ 194 (215)
T TIGR01487 124 IIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD--DQ 194 (215)
T ss_pred HHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--HH
Confidence 55543 3444444 44 8999999999999999999999999999999 777777 8 99999999999999998 55
Q ss_pred ccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 850 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
+|..|+ |||+++++|||+++|
T Consensus 195 ~k~~A~-----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIAD-----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCC-----------------EEcCCCCCchhhhhC
Confidence 555555 499999999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-24 Score=249.36 Aligned_cols=524 Identities=14% Similarity=0.106 Sum_probs=343.8
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.-|+|..|.....++...+... ..+++-+..|+..+-. +.+... + ..+. -...+..+|.+-..
T Consensus 140 ~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~r~l---p---------~r~e---Il~gll~~~~i~f~ 203 (732)
T KOG1050|consen 140 EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIYRCL---P---------VRKE---ILRGLLYDDLLGFH 203 (732)
T ss_pred CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHHHhc---c---------cHHH---HHHhhhccCccccc
Confidence 4677777776444444445444 3566667778765422 111100 0 0011 11245677776666
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhH-----hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARI-----KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+.+.....+.. -.+.|+... ..||++.|+.. .+..+|.|||..+|......
T Consensus 204 t~d~arhFls~-------c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~---------------- 259 (732)
T KOG1050|consen 204 TDDYARHFLST-------CSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLEL---------------- 259 (732)
T ss_pred cccHHHHHHHH-------HHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccc----------------
Confidence 65444433221 123333332 34678888776 89999999999998743311
Q ss_pred CchhHHhhhhcCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHH
Q 002660 298 PPIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVL 368 (895)
Q Consensus 298 ~~~~~~~~~~~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~ 368 (895)
+........+..+ .++++|+.++|+++.||+..-+.||+++.+..+.+ +++++ + +++.+++.++......+
T Consensus 260 ~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v 339 (732)
T KOG1050|consen 260 PYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHV 339 (732)
T ss_pred hhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhh
Confidence 1111122222111 57899999999999999999999999998666654 34332 2 34455566777788888
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhc
Q 002660 369 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDI 443 (895)
Q Consensus 369 ~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~ei 443 (895)
.++++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| |..|++...|...-+
T Consensus 340 ~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl 415 (732)
T KOG1050|consen 340 RRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL 415 (732)
T ss_pred hhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc
Confidence 8888888888877778889999999999999999 9999999999999999999999 445555566665432
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH-HHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCC
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ-NGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETS 522 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~-~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (895)
++..++++|+|.+.++.+|..++++++...+++. ...+.+..++...|+..+...+.+.-.... .
T Consensus 416 ---~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~-~---------- 481 (732)
T KOG1050|consen 416 ---EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGF-L---------- 481 (732)
T ss_pred ---cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcc-c----------
Confidence 3567899999999999999999997765444444 444444678889999999884443322111 0
Q ss_pred CCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcC
Q 002660 523 ESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGA 602 (895)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (895)
.+++ ++-...+.++..|+
T Consensus 482 -------------------~~~~---------------------~~~l~~~~~i~~y~---------------------- 499 (732)
T KOG1050|consen 482 -------------------GFRV---------------------TPLLTAEHIVSDYK---------------------- 499 (732)
T ss_pred -------------------cccc---------------------ccccChhHhhhhhh----------------------
Confidence 0000 00123456788888
Q ss_pred CCCccccccCeEEEEEecCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh-CCCCCCCCCEEEEcC
Q 002660 603 AKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS-GHLSPSDFDAFICNS 681 (895)
Q Consensus 603 ~~~~~~~~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~-l~l~~~~~d~~I~~n 681 (895)
++.+|+|++|+|||+....+..+...++.|... ++..|.|+|||....+..++.. .++ +++++|
T Consensus 500 ------~s~~rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEh 564 (732)
T KOG1050|consen 500 ------KSKKRLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEH 564 (732)
T ss_pred ------hccceEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeeccc
Confidence 789999999999999544444477778888887 6889999999999999777633 334 799999
Q ss_pred CceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHh----hhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 682 GSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR----WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 682 Ga~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
|.++..++.|.... .+.. |. +.+.++++. .+++..+.+ ...+.|++.+
T Consensus 565 G~f~r~~~~w~~~~---~~~~--------w~-~~v~~i~~~~~ert~GS~ie~k----------------~~~l~~hy~~ 616 (732)
T KOG1050|consen 565 GYFVRIPGKWETCV---LDLD--------WK-DLVKDIFQYYTERTPGSYIERK----------------ETALVWHYRN 616 (732)
T ss_pred CceeccCCceeeec---cccc--------HH-HHHHHHHHHHHhcCCCceeccc----------------CceEEEeeec
Confidence 99999876422111 2333 33 334444443 344443333 2334455543
Q ss_pred C--CCC-ccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC
Q 002660 758 P--GMT-PPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG 834 (895)
Q Consensus 758 ~--~~~-~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ 834 (895)
. +.. ....++.++|......+.+. .+...+||-|.|+|||.|...+...+.-+++.+++ .||+.. | ++||+.
T Consensus 617 ad~~~g~~qA~el~~~l~~~~~~~~v~--~g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D-ed~~~~ 691 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHLESKNEPVEVV--RGKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D-EDMFEF 691 (732)
T ss_pred cCcchhHHHHHHHHHHhcccCCCeEEE--ecCceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h-HHHHHH
Confidence 3 321 22356666666523334433 34348999999999999999999999833344555 777554 8 999987
Q ss_pred c
Q 002660 835 V 835 (895)
Q Consensus 835 a 835 (895)
.
T Consensus 692 ~ 692 (732)
T KOG1050|consen 692 I 692 (732)
T ss_pred H
Confidence 5
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=242.64 Aligned_cols=331 Identities=17% Similarity=0.175 Sum_probs=227.1
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
.+||..+++..|+++|.++| |+|+++|...... .+.. ...|+++.+++....
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~~---------~~~~-------------~~~~~~~~~~~~~~~---- 59 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGLE---------ARLV-------------PKAGIPLHTIPVGGL---- 59 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcch---------hhcc-------------cccCCceEEEEecCc----
Confidence 57899999999999999999 9999998753110 0000 013678888876422
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+...+..+..+.. .+..+.+..+.+.+ ++||+||+|....+..+..+++..++|++++.|+..+..
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~----- 126 (350)
T cd03785 60 RRKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGL----- 126 (350)
T ss_pred CCCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccH-----
Confidence 11111111111111 11111122222222 789999999876667777778888999998776642210
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
. ++...+.+|.|+++|+...+. +.+ .++.++
T Consensus 127 ----------------~-----~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i 157 (350)
T cd03785 127 ----------------A-----NRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVT 157 (350)
T ss_pred ----------------H-----HHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEE
Confidence 0 223456789999999865443 112 289999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 345 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~ 345 (895)
|||+|.+.+.+.. .+.++..++++++|+++|+....|+... +++|+..+. .+..
T Consensus 158 ~n~v~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~ 212 (350)
T cd03785 158 GNPVREEILALDR-----------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRL 212 (350)
T ss_pred CCCCchHHhhhhh-----------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCe
Confidence 9999987765321 0223344567788888888777777754 558888875 2333
Q ss_pred cEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 346 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 346 ~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
.+.+++|.+. .+++.+.+..+ .++|.|.|++ +++.++|+.| |++|.++ + +++++||
T Consensus 213 ~~~~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~s---g-~~t~~Ea 268 (350)
T cd03785 213 QVIHQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRA---G-ASTVAEL 268 (350)
T ss_pred EEEEEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECC---C-HhHHHHH
Confidence 3334667762 23344455544 4689999996 7999999999 9999876 2 6899999
Q ss_pred HHcCCCEEEcCCCC--------chhccccCCCeEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 002660 426 AAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 495 (895)
Q Consensus 426 ~a~G~PVvas~~gg--------~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a 495 (895)
|++|+|||+++.++ ..+.+.+.++|+++++. |+++++++|.+++++++.+++++.++++.++.+..++++
T Consensus 269 m~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 269 AALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred HHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999987654 24566677899999987 899999999999999999999999999888888777766
Q ss_pred H
Q 002660 496 K 496 (895)
Q Consensus 496 ~ 496 (895)
+
T Consensus 349 ~ 349 (350)
T cd03785 349 D 349 (350)
T ss_pred h
Confidence 4
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=240.30 Aligned_cols=328 Identities=18% Similarity=0.182 Sum_probs=218.5
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
.+||......+|+++|.++| |+|+++|+... . ..+.. ...|+++++++..+.. ..
T Consensus 9 ~~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~--~-------~~~~~-------------~~~g~~~~~i~~~~~~-~~ 63 (348)
T TIGR01133 9 GTGGHIFPALAVAEELIKRG--VEVLWLGTKRG--L-------EKRLV-------------PKAGIEFYFIPVGGLR-RK 63 (348)
T ss_pred ccHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc--c-------hhccc-------------ccCCCceEEEeccCcC-CC
Confidence 45677766679999999999 99999986321 0 00000 1137888888764421 11
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
. +...+..+.. .+..+.++.+.+.+ ++||+||+|.......+..+++..++|+|++.|+..+..
T Consensus 64 ~---~~~~l~~~~~-~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~----- 127 (348)
T TIGR01133 64 G---SFRLIKTPLK-LLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPGL----- 127 (348)
T ss_pred C---hHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 1 1001111000 11112222222222 789999999876666677777888999986555432100
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.+++..+.+|.+++.++...+.+ +..+|
T Consensus 128 ---------------------~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i 155 (348)
T TIGR01133 128 ---------------------TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLV 155 (348)
T ss_pred ---------------------HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEE
Confidence 02335678999999998654321 34799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 345 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~ 345 (895)
|||+|...+.+... ..+++.+++.++|+++|+....|++.. +++|++.+.. ...
T Consensus 156 ~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~ 210 (348)
T TIGR01133 156 GNPVRQEIRSLPVP-----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGI 210 (348)
T ss_pred cCCcCHHHhcccch-----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCc
Confidence 99998765543210 112334567789999998888888654 5588888753 234
Q ss_pred cEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 346 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 346 ~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
++.+++|+++ ..++.+.+.++++...+.|. ..++.++|+.| |++|.++ | +++++||
T Consensus 211 ~~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~----~~~~~~~l~~a----d~~v~~~---g-~~~l~Ea 266 (348)
T TIGR01133 211 QIVHQTGKND------------LEKVKNVYQELGIEAIVTFI----DENMAAAYAAA----DLVISRA---G-ASTVAEL 266 (348)
T ss_pred EEEEECCcch------------HHHHHHHHhhCCceEEecCc----ccCHHHHHHhC----CEEEECC---C-hhHHHHH
Confidence 4534445442 24556667777775555555 23899999999 9999864 3 7899999
Q ss_pred HHcCCCEEEcCCCC-------chhccccCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHH
Q 002660 426 AAHGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 496 (895)
Q Consensus 426 ~a~G~PVvas~~gg-------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~ 496 (895)
|++|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.+++++++.+++|++++++.++.+..+++++
T Consensus 267 ~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 267 AAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999999988654 235777888999998876 999999999999999999999999988877666666654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-25 Score=235.08 Aligned_cols=242 Identities=17% Similarity=0.134 Sum_probs=150.2
Q ss_pred cCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+||+|+||||. ..+++.++++|++|+++ |+.|+|||||++..+..+++++++. +++||.||+.|++
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~ 74 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYI 74 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEe
Confidence 36899999999994 45778899999999997 5999999999999999999999983 4799999999997
Q ss_pred ccCCCC-CC--CcccchhhHHHhhcccCcchHHHHHHhhhhhcc-ccccc-----------cC--CcccccccccCCceE
Q 002660 688 STLNSE-DG--PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT-DKKAE-----------SG--EKVLTPAEQLSTNYC 750 (895)
Q Consensus 688 ~~~~~~-~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~--~~~~~~~~~~~~~~k 750 (895)
.+.... .. ....+..| ........+.+.+++..+..... ..... .. .... +........+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 151 (273)
T PRK00192 75 PKNYFPFQPDGERLKGDYW--VIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESA-RLAKDREFSE 151 (273)
T ss_pred cccccccCCccccccCCce--EEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHH-HHHHhcccCC
Confidence 542100 00 00000000 00011111222222211111000 00000 00 0000 0000001111
Q ss_pred EEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCc-ccEEEEecCCCCCCcc
Q 002660 751 YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVEL-SKMVVFVGESGDTDYE 829 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~-~~viaf~Gd~nn~D~~ 829 (895)
..+.... ....+.+.+.+...+ +.++.+ + +++||+|.+ |||.|+++|++++|+++ +++++ +||+.| | +
T Consensus 152 ~~~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i 220 (273)
T PRK00192 152 PFLWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-L 220 (273)
T ss_pred ceeecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-H
Confidence 1111111 123455666664432 444443 4 499999999 99999999999999999 99999 777777 7 9
Q ss_pred ccccCcceEEEecCcccccccc----ccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 830 GLLGGVHKTVILKGICSSSSNQ----IHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 830 eMl~~ag~gVaMgNa~~~~~~~----~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+||+.+|++|||+||. +++| ..+. ...++|.++.+|||+++|+++
T Consensus 221 ~m~~~ag~~vam~NA~--~~~k~~~~~~a~--------------~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 221 PMLEAADIAVVVPGPD--GPNPPLLPGIAD--------------GEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHHHhCCeeEEeCCCC--CCCcccCccccC--------------CceEEecCCCcHHHHHHHHHH
Confidence 9999999999999999 4444 1110 123444899999999999974
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=246.90 Aligned_cols=314 Identities=15% Similarity=0.111 Sum_probs=206.1
Q ss_pred CCcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.-|+|..|.+...+++..+.++. ..++.+.+|-.++..- ++ ....+... -...+-.||.|-..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--~f-----------r~lP~r~e---iL~glL~aDlIgFq 204 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE--IF-----------RCLPWREE---ILRGLLGADLIGFQ 204 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH--HH-----------TTSTTHHH---HHHHHTTSSEEEES
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH--HH-----------hhCCcHHH---HHHHhhcCCEEEEe
Confidence 46899999987777887777654 6788999998765321 11 00111111 22467899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhc---cccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKR---NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~---gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
+...++.+... ..+.|+.+... +|.+.|+.+ ++.++|.|||++.|.....+ +....
T Consensus 205 t~~~~~nFl~~-------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~-------------~~v~~ 263 (474)
T PF00982_consen 205 TFEYARNFLSC-------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS-------------PEVQE 263 (474)
T ss_dssp SHHHHHHHHHH-------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--------------S---H
T ss_pred cHHHHHHHHHH-------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-------------hHHHH
Confidence 99888776443 23444444322 477777777 99999999999988632211 11223
Q ss_pred hhHHhhhhcCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCccccccchHHHHHH
Q 002660 300 IWSEIMRFFTNPR-KPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLS 370 (895)
Q Consensus 300 ~~~~~~~~~~~~~-~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G~~~~~~~~~~~~~~~~~~ 370 (895)
....+++.. .+ .++|+.++|+|+.||+...++||+++.+.+|.+ +++++ + .+.++|++++++..+.+++
T Consensus 264 ~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~ 341 (474)
T PF00982_consen 264 RAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGR 341 (474)
T ss_dssp HHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHH
Confidence 333444433 34 589999999999999999999999998777765 45542 2 2234456788899999999
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccc
Q 002660 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHR 445 (895)
Q Consensus 371 l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~ 445 (895)
||+..+..+|.+.+++.+.++.+++.++|+.| ||+++||++|||||+++||++| |+.|+|..+|+..++
T Consensus 342 IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-- 415 (474)
T PF00982_consen 342 INGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-- 415 (474)
T ss_dssp HHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT---
T ss_pred HHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc--
Confidence 99999999999999999999999999999999 9999999999999999999999 778888888888776
Q ss_pred cCC-CeEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 446 VLD-NGLLVDPHDQQSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 446 ~~~-~g~lv~p~d~~~la~ai~~ll~~~~-~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
. .+++|||+|++++|++|.++|+++. +++...+..++.+..+|...|++.|++.+++
T Consensus 416 --~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 416 --SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp --TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred --CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 4 3499999999999999999999665 5566666677777999999999999998763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=233.02 Aligned_cols=314 Identities=14% Similarity=0.139 Sum_probs=239.4
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
=|+|..|.+...+++..+.++. ..++.|.+|-.++..- ++. ...+... -...+-.||.|-.-+
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE--vfr-----------~lP~r~e---Il~gll~~dligFqt 211 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE--VFR-----------CLPWREE---ILEGLLGADLIGFQT 211 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH--HHh-----------hCchHHH---HHHHhhcCCeeEecC
Confidence 3999999987777777777654 4678889998765331 110 0001111 123577999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhHhcccccc---CCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY---GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~---g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
...++.+.... .+.++.+...++..- |+.. ++..+|.|||+..|.....+. .....
T Consensus 212 ~~y~~nF~~~~-------~r~~~~~~~~~~~~~~~~~~~v-~v~a~PIgID~~~~~~~~~~~-------------~v~~~ 270 (486)
T COG0380 212 ESYARNFLDLC-------SRLLGVTGDADIRFNGADGRIV-KVGAFPIGIDPEEFERALKSP-------------SVQEK 270 (486)
T ss_pred HHHHHHHHHHH-------HHhccccccccccccccCCceE-EEEEEeeecCHHHHHHhhcCC-------------chhhH
Confidence 88877665543 233332222333333 3333 899999999999997543211 12233
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCCccccccchHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~liv------G~~~~~~~~~~~~~~~~~~l~ 372 (895)
+.++++.. ..++++|+.++|+|+.||+...+.||++|++.+|.+ +++++. ++.+.|+.++.+..+.+++||
T Consensus 271 ~~el~~~~-~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN 349 (486)
T COG0380 271 VLELKAEL-GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRIN 349 (486)
T ss_pred HHHHHHHh-cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHH
Confidence 44444443 233899999999999999999999999998767766 444322 344455568888999999999
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccC
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVL 447 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~ 447 (895)
+.++..++.|..+|+..++.+++.++|+.| |+++++|++|||+||++||+|| |+.|++..+|+..++
T Consensus 350 ~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L---- 421 (486)
T COG0380 350 GEFGSLSWTPVHYLHRDLDRNELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL---- 421 (486)
T ss_pred hhcCCCCcceeEEEeccCCHHHHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----
Confidence 999999999999999999999999999999 9999999999999999999999 899999999999998
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
..+++|||+|.+++|++|.++|+++ +++++..+..++.+..++...|+.+|++.+..
T Consensus 422 ~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 422 RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 5599999999999999999999955 55666666667777899999999999999886
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-23 Score=216.42 Aligned_cols=195 Identities=10% Similarity=0.051 Sum_probs=129.2
Q ss_pred ccCeEEEEEecCCCCc--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 610 RRKHIFVISVDCDSTT--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
..+.+|++|+||||.. .+++.++++|++|++. +|+.|+|+|||++..+.++++.+++ .+||+|
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~n 82 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVH 82 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeC
Confidence 3468999999999942 5678999999999984 3699999999999999999988765 489999
Q ss_pred CceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHh----hhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 682 GSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR----WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 682 Ga~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
|++|+..+... +...+...|. +.+...+.. .++...+.+ ...+.++++.
T Consensus 83 Ga~i~~~~~~~----------~~~~l~~~~~-~~i~~~l~~~~~~~pg~~ve~k----------------~~~~~~h~r~ 135 (266)
T PRK10187 83 GAERRDINGKT----------HIVHLPDAIA-RDISVQLHTALAQLPGAELEAK----------------GMAFALHYRQ 135 (266)
T ss_pred CCeeecCCCCe----------eeccCChhHH-HHHHHHHHHHhccCCCcEEEeC----------------CcEEEEECCC
Confidence 99998653210 0001111111 111111211 112222111 1223344432
Q ss_pred CC-CCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc-
Q 002660 758 PG-MTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV- 835 (895)
Q Consensus 758 ~~-~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a- 835 (895)
.. ....+.++.+.+......+. +.+.. .++||+|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 136 ~~~~~~~~~~l~~~i~~~~~~~~-~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~ 210 (266)
T PRK10187 136 APQHEDALLALAQRITQIWPQLA-LQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVN 210 (266)
T ss_pred CCccHHHHHHHHHHHHhhCCceE-EeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHH
Confidence 21 11223334434433222222 33444 59999999999999999999999999999988 666666 7 9999999
Q ss_pred ---ceEEEecCcc
Q 002660 836 ---HKTVILKGIC 845 (895)
Q Consensus 836 ---g~gVaMgNa~ 845 (895)
|.||+||||.
T Consensus 211 ~~~g~~vavg~a~ 223 (266)
T PRK10187 211 RLGGISVKVGTGA 223 (266)
T ss_pred hcCCeEEEECCCC
Confidence 9999999998
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.2e-22 Score=225.60 Aligned_cols=284 Identities=15% Similarity=0.204 Sum_probs=190.5
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||+||++...........++..++|++++.|.+....+.. |+...++ ++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~---------------~~~~~~~--~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFKR---------------YQKFKRF--YRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHHH---------------HHHHHHH--HHHHHHhCCEEEEC
Confidence 789999988543222233345677999998766543221110 1111121 44568899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.. +|.+.+ +.++||+ +.+.+.+.. .......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~----------------~~~~~~~ 224 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE----------------LAARAAT 224 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh----------------hHHHHHH
Confidence 9987776533 233333 7888884 333332110 0001112
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+.++. +++++++++|+. .|+.+.+++|+..+.+. .+++.+ |+|++++. ..++.+.+++.++.
T Consensus 225 ~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 225 LRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 223333 467888888874 68899999999988643 345554 77877631 24566777777775
Q ss_pred CcEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccC
Q 002660 382 GQVAYPKHHK------------QSDVPEIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVL 447 (895)
Q Consensus 382 ~~v~~~g~~~------------~~el~~ly~~A~~~~dv~v~-ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~ 447 (895)
. +.|.+..+ ..++..+|+.| |++++ +|+.|++|.+++||||||+|||+++. ++..|+++..
T Consensus 289 ~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 Y-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred E-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 2 44433211 35899999999 99655 67889999999999999999999874 6666665542
Q ss_pred -CCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 448 -DNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 448 -~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.+|+++.+.|+++++++|.++++|++.++++++++++.++.. ....+++++.+...++
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 467888899999999999999999999999999999999533 2556677777765543
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-21 Score=215.03 Aligned_cols=264 Identities=13% Similarity=0.073 Sum_probs=180.6
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||++++.........+...++|++.+.+++.... + +..+.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------~------~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------I------WVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------c------cccCCCCEEEEC
Confidence 789999999875544444444556799887666642211 1 246789999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.+. |.+.+++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~~-----------------------gi~~~ki~v~G~p~~~~-f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVDI-----------------------GVPPEQVVETGIPIRSS-FELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHHc-----------------------CCChhHEEEECcccChH-HcCcC-------------------CHHH
Confidence 98766654331 22233788876665432 32111 0112
Q ss_pred HhhhhcCCCCCc-EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKP-VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~-~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+.+++..++++ ++++.|++...|++..+++++... +...+.+++|.+. .+.+++.++++..+
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~-- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP-- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--
Confidence 344556566655 455668888889999999987643 2233433334331 12345555655544
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCch----hccccCCCeEEeCCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV----DIHRVLDNGLLVDPH 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~----eiv~~~~~g~lv~p~ 456 (895)
++|.|+|++ +++.++|+.| |++|. ++.|++++|||+||+|||+++ .+|.. +++.. +|..+.+.
T Consensus 256 ~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~ 323 (380)
T PRK13609 256 DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIR 323 (380)
T ss_pred CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEEC
Confidence 679999996 5799999999 99874 466999999999999999976 55531 23332 34444457
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
|+++++++|.+++++++.++++++++++..+.++++.+++.+++.+...
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 324 DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999988777889999999998887644
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=205.80 Aligned_cols=210 Identities=14% Similarity=0.098 Sum_probs=120.9
Q ss_pred cCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+.
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYK 77 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEE
Confidence 3689999999999 356889999999999998 5999999999999998888754321 135789999999996
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeC----------
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK---------- 757 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---------- 757 (895)
.+. ..... .+......+.+.+++..................+..... ...........
T Consensus 78 ~~~------~i~~~----~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (247)
T PTZ00174 78 DGE------LFHSQ----SILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRN--GMINISPIGRNCSQEERDEFE 145 (247)
T ss_pred CCe------EEEEE----cchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCC--ceEEeccccccCCHHHHHHHH
Confidence 431 11001 000001112222222111000000000000000000000 00000000000
Q ss_pred --CCCCccHHHHHHHHHhccCeEEEEEecC-CeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 758 --PGMTPPVKELRKVLRIQALRCHVIYCQN-GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 758 --~~~~~~~~~l~~~l~~~~~~~~~~~s~~-~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
.......+++.+.+......+.+.++.+ ..++||+|+|+|||.||++|+++ ++++|| +|| +.| | ++
T Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N-D-ie 218 (247)
T PTZ00174 146 KYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN-D-YE 218 (247)
T ss_pred hcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC-c-Hh
Confidence 0001123455555544333345555543 24899999999999999999999 589999 666 667 7 99
Q ss_pred cccCc-ceEEEecCcc
Q 002660 831 LLGGV-HKTVILKGIC 845 (895)
Q Consensus 831 Ml~~a-g~gVaMgNa~ 845 (895)
||+.+ -.|++++||.
T Consensus 219 Ml~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 219 IYNDPRTIGHSVKNPE 234 (247)
T ss_pred hhhcCCCceEEeCCHH
Confidence 99965 3455556988
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-21 Score=217.76 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=155.7
Q ss_pred ccccccCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 606 PALRRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 606 ~~~~~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
|.....+|+||+|+||||. +...+.++++|++++++ |+.|++||||++..+..+++++++. +++||+||
T Consensus 410 ~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~~~I~eNG 481 (694)
T PRK14502 410 PSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----DPFITENG 481 (694)
T ss_pred CCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----CeEEEcCC
Confidence 3335578999999999993 34567889999999998 5999999999999999999999983 68999999
Q ss_pred ceEeeccCCCCCCCcccchhhHH--HhhcccCcchHHHHHHhhhhhcc---c----c--ccccCC-cc-------cc---
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHS--HIEYRWGGEGLRKTLVRWASQVT---D----K--KAESGE-KV-------LT--- 740 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~---~----~--~~~~~~-~~-------~~--- 740 (895)
+.|+...+... .....+..... .....+..+.+.++++....... . . ...... .. ++
T Consensus 482 A~I~~~~~~~~-~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~ 560 (694)
T PRK14502 482 GAIFIPKDYFR-LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLN 560 (694)
T ss_pred CEEEECCCccc-ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCC
Confidence 99998653110 00000000000 01112222333333332221000 0 0 000000 00 00
Q ss_pred -----cccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCccc
Q 002660 741 -----PAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSK 815 (895)
Q Consensus 741 -----~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~ 815 (895)
.........|+.+. .+ ...++++.+.+...+ +++.. .+ +++||+ +++|||+||++|++++|++.++
T Consensus 561 ~~~a~~a~~Re~seKIl~~-gd---~e~Leel~~~L~~~~--l~v~~-g~-rfleI~-~gvdKG~AL~~L~e~~gI~~~e 631 (694)
T PRK14502 561 LKQAELAKQREYSETVHIE-GD---KRSTNIVLNHIQQSG--LEYSF-GG-RFYEVT-GGNDKGKAIKILNELFRLNFGN 631 (694)
T ss_pred HHHHHHHhhccCceeEEEc-CC---HHHHHHHHHHHHHcC--cEEEE-CC-EEEEeC-CCCCHHHHHHHHHHHhCCCccc
Confidence 00001112343332 11 234567777776653 44443 44 599999 5999999999999999999999
Q ss_pred EEEE-ecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 816 MVVF-VGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 816 viaf-~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+++| .||+.| | ++||+.||+||||++-...-... ..+... .|+....-|-.+|++++
T Consensus 632 ViafalGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l---------------~~~~~~-~~~~~GP~GW~eai~~~ 689 (694)
T PRK14502 632 IHTFGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM---------------RLRNPS-YVKGVGPEGFSRAVTDI 689 (694)
T ss_pred eEEEEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc---------------CCCCce-ecCCCCcHHHHHHHHHH
Confidence 9995 288888 8 99999999999998776222111 122223 56888888888888765
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-20 Score=206.62 Aligned_cols=266 Identities=17% Similarity=0.133 Sum_probs=178.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+..|++++.+.+..++.. ..+.++|++.+|.+.... +. ... .. ..|+..++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~~--------~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PPE--------LL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CHH--------HH--HHHHHHHHhCCEEEEC
Confidence 4566777766544333332 557899999998654321 10 110 01 3477889999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.. +. .++.+||||+|.+.|.+...... . .
T Consensus 161 S~~l~~~~~~-~~-------------------------~~i~~i~ngvd~~~f~~~~~~~~---------------~-~- 197 (373)
T cd04950 161 SPSLYEAKRR-LN-------------------------PNVVLVPNGVDYEHFAAARDPPP---------------P-P- 197 (373)
T ss_pred CHHHHHHHhh-CC-------------------------CCEEEcccccCHHHhhcccccCC---------------C-h-
Confidence 9876654322 11 28999999999999875431110 0 0
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
+.....++++++|+|++.+.++++.+.++... .++..+ +++|.++..... ......+
T Consensus 198 ---~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~----~p~~~~-vliG~~~~~~~~---------------~~~~~~~ 254 (373)
T cd04950 198 ---ADLAALPRPVIGYYGAIAEWLDLELLEALAKA----RPDWSF-VLIGPVDVSIDP---------------SALLRLP 254 (373)
T ss_pred ---hHHhcCCCCEEEEEeccccccCHHHHHHHHHH----CCCCEE-EEECCCcCccCh---------------hHhccCC
Confidence 01123467899999999998887766555443 344444 477876321110 1111247
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCC
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-----Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+|+|+|+++.++++.+|+.+ |++++|+.. +++|++++||||||+|||+|+.++..+ ....++ +.++|
T Consensus 255 nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~-~~~~d 326 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVV-LIADD 326 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEE-EeCCC
Confidence 89999999999999999999 999999753 467999999999999999998765444 333344 44679
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+++++++|.+++.++...... ...+.++.|||+..++++++.+.+
T Consensus 327 ~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 327 PEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999987643221111 122245799999999999977664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=203.60 Aligned_cols=205 Identities=15% Similarity=0.101 Sum_probs=124.8
Q ss_pred EEEEEecCCCCc--c-hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDSTT--G-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~~--~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
+|++||||||.. . .++.++++|++++++ |+.|++||||++..+.++++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 589999999942 2 455599999999987 6999999999999999999999983 14799999999987532
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh---ccccccc--------cCCcccccc-cccCCceEEEEEeeCC
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAE--------SGEKVLTPA-EQLSTNYCYAFSVQKP 758 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~-~~~~~~~k~~~~~~~~ 758 (895)
+.....+.. ....+..+.+.++++.+... ....... ...-..... .......+..+... .
T Consensus 74 ~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 145 (221)
T TIGR02463 74 WREEPGYPR-------IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR-D 145 (221)
T ss_pred cccCCCceE-------EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec-C
Confidence 210000000 00001111111211110000 0000000 000000000 00001122222220 1
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 838 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g 838 (895)
. ....+++.+.+...+ +.+..+ +. ++||+|++++||.|++++++++|++++++++ +||+.| | ++||+.+|.|
T Consensus 146 ~-~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ag~~ 217 (221)
T TIGR02463 146 S-DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVADYA 217 (221)
T ss_pred c-hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhCCce
Confidence 1 223455666665433 444443 44 8999999999999999999999999999999 777777 7 9999999999
Q ss_pred EEe
Q 002660 839 VIL 841 (895)
Q Consensus 839 VaM 841 (895)
||+
T Consensus 218 va~ 220 (221)
T TIGR02463 218 VVI 220 (221)
T ss_pred EEe
Confidence 997
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=203.96 Aligned_cols=268 Identities=12% Similarity=0.100 Sum_probs=183.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||++.+.........++.+++|++...++.... .. +..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~----------------------~~------w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH----------------------KN------WITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc----------------------cc------cccCCCCEEEEC
Confidence 78999999876443332333455689987665553110 01 135789999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.+. +.+ .+++.+++++++.. |.... ....
T Consensus 155 s~~~~~~l~~~--gi~---------------------~~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GID---------------------PSTVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CCC---------------------HHHEEEECeecChH-hcccc-------------------cHHH
Confidence 98776655332 122 23888888877643 32111 1112
Q ss_pred HhhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~-il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+++++.++++++ +++.|++...||+..+++++... .+...+.+++|.++ ++.+++.. .++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---KFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---HhccC
Confidence 3345555566654 56789999899999999986322 23334433445432 11233332 23344
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCC----chhccccCCCeEEeCCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGG----PVDIHRVLDNGLLVDPH 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg----~~eiv~~~~~g~lv~p~ 456 (895)
++|.|.|+. ++++++|+.| |++|. .+.|+++.|||+||+|+|+++ .+| ...++.+.+.|+++ .
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~ 323 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--D 323 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--C
Confidence 679999985 6899999999 99986 357899999999999999986 333 12233455556554 5
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
|+++++++|.+++++++.+++|++++++..+.|+++.+++.+++.+....+.+
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999998889999999999999998765543
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-19 Score=203.04 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=187.1
Q ss_pred CCCcEEEecccc-chhHHHHHhc-----cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhccc
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSG-----ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 216 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~-----~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a 216 (895)
.+||+||++++. ....+..+++ ..++|++.++.|++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 789999997643 2222222221 35799998888763111 01246789
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
|.++++|+...+.+.+. |.+.+++.+++++++.+.+.+..
T Consensus 152 d~~~~~s~~~~~~l~~~-----------------------g~~~~ki~v~g~~v~~~f~~~~~----------------- 191 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR-----------------------GLEPSQIRVYGLPIRPSFARAVR----------------- 191 (382)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCHHHEEEECcccCHhhccCCC-----------------
Confidence 99999998766654332 22334899999999875443211
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~----~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
.....+++++.++++++|+++|+....|++..+++++..+... .+...+.+++|.++. +..++.
T Consensus 192 --~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 192 --PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred --CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 1223456677778899999999999999999999999765310 122334356676521 122332
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC------CCchhcccc
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN------GGPVDIHRV 446 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~------gg~~eiv~~ 446 (895)
+. ....+|.|.|++ ++++++|+.| |++|.++ .|+++.|||+||+|+|+++. |+...+ .+
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VD 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHH-Hh
Confidence 22 223568999996 5899999999 9999865 58899999999999999983 444434 44
Q ss_pred CCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 447 LDNGLLVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 447 ~~~g~lv~p~d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+...
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELVR 380 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 5667654 6999999999999998 99999999999998888898988888776654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-21 Score=195.49 Aligned_cols=195 Identities=16% Similarity=0.220 Sum_probs=126.8
Q ss_pred EEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeecc
Q 002660 614 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 614 li~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
||++|+||||+ ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||++|+..+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 58999999993 35779999999999998 59999999999999999998743 469999999999753
Q ss_pred CCCCCCCcc-cchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCC-CCccHHHH
Q 002660 690 LNSEDGPFV-VDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG-MTPPVKEL 767 (895)
Q Consensus 690 ~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~l 767 (895)
.. .+. ....|...+.. . +.+...+..+..... ... .........+++.+.. .......+
T Consensus 71 ~~----~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~--------~~~----~e~~~~~~~~~~~~~~~~~~~~~~~ 131 (204)
T TIGR01484 71 EI----LYIEPSDVFEEILGI--K-EEIGAELKSLSEHYV--------GTF----IEDKAIAVAIHYVGAELGQELDSKM 131 (204)
T ss_pred EE----EEEcccccHHHHHHh--h-hhcCceeeeeccccc--------cce----eecccceeeEEEeccchhhHHHHHH
Confidence 11 000 00111111110 0 001111100000000 000 0122344455543321 11112344
Q ss_pred HHHHHhcc---CeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 768 RKVLRIQA---LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 768 ~~~l~~~~---~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
...+.... ..+.+..+++. ++||+|++++|+.|++.++++++++++++++ +||+.| | ++||+.+|++|||
T Consensus 132 ~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 132 RERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 44444322 34666656675 9999999999999999999999999999988 777777 7 9999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=187.77 Aligned_cols=164 Identities=30% Similarity=0.516 Sum_probs=142.0
Q ss_pred hhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 306 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 306 ~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
......++++|+++||+.+.||++.+++|+..+.+. ..+++. +|+|.++ ....+...+..+++..++
T Consensus 8 ~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i 75 (172)
T PF00534_consen 8 KLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENI 75 (172)
T ss_dssp HTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTE
T ss_pred HcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEcccc-----------cccccccccccccccccc
Confidence 344457889999999999999999999999998642 134444 4778554 246677888889999999
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHH
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 464 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~a 464 (895)
.|++.++.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++
T Consensus 76 ~~~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~ 151 (172)
T PF00534_consen 76 IFLGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADA 151 (172)
T ss_dssp EEEESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHH
T ss_pred cccccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHH
Confidence 999998888999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHH
Q 002660 465 LLKLVADKQLWARCRQNGLKN 485 (895)
Q Consensus 465 i~~ll~~~~~~~~~~~~~~~~ 485 (895)
|.+++.+++.++.++++++++
T Consensus 152 i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 152 IEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHhcCC
Confidence 999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-19 Score=193.06 Aligned_cols=211 Identities=12% Similarity=0.178 Sum_probs=130.4
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.++.+||+|+||||. ..+++.++++|+.|.+. ..++|+|||+...+.+++...++ +++++
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGs 184 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGS 184 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEe
Confidence 5678899999999992 45688999999999987 36999999999999999876665 69999
Q ss_pred CCceEeeccCCCCCCCc-----ccc---hhhHH-HhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEE
Q 002660 681 SGSDLYYSTLNSEDGPF-----VVD---FYYHS-HIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 751 (895)
Q Consensus 681 nGa~I~~~~~~~~~~~~-----~~~---~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 751 (895)
||.++...........+ ..+ ..|.. .....|. ..+.++...+........ ..+.| ...+++
T Consensus 185 HG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~-~~i~~v~~~l~e~~~~~p-----Gs~VE----~K~~sv 254 (384)
T PLN02580 185 HGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFL-PMIDEVFRSLVESTKDIK-----GAKVE----NHKFCV 254 (384)
T ss_pred CCceeecCCCCcccccccccccccccccccccccccchhhh-hhHHHHHHHHHHHhccCC-----CCEEE----ecCcEE
Confidence 99998754211000000 000 01100 0011122 112222222111110000 11111 236778
Q ss_pred EEEeeCCCCC--c-cHHHHHHHHHhccCeEEEEEecCCeeEEeec-CCCChHHHHHHHHHHhCCCccc-E-EEEecCCCC
Q 002660 752 AFSVQKPGMT--P-PVKELRKVLRIQALRCHVIYCQNGSRINVIP-VLASRSQALRYLYLRWGVELSK-M-VVFVGESGD 825 (895)
Q Consensus 752 ~~~~~~~~~~--~-~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p-~g~sKg~al~~L~~~~gi~~~~-v-iaf~Gd~nn 825 (895)
++|++..... . ..+++...+... ..+.+ .++.+++||.| .++|||.||++|++++|++.++ + .+|+||+.|
T Consensus 255 avHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v--~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~T 331 (384)
T PLN02580 255 SVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRL--THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRT 331 (384)
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHhC-CceEE--EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCch
Confidence 8888654321 1 112223333221 22433 34445999999 5999999999999999998774 3 355777777
Q ss_pred CCccccccC-----cceEEEecCcc
Q 002660 826 TDYEGLLGG-----VHKTVILKGIC 845 (895)
Q Consensus 826 ~D~~eMl~~-----ag~gVaMgNa~ 845 (895)
| ++||+. +|+||+|||+.
T Consensus 332 -D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 332 -D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred -H-HHHHHhhhccCCceEEEEecCC
Confidence 8 999996 59999999987
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=187.76 Aligned_cols=200 Identities=13% Similarity=0.063 Sum_probs=122.3
Q ss_pred EEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 614 IFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 614 li~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
+||+|+||||. ...++.++++|++++++ |+.|++||||++..+..+++++++. +++||+||+.|++....
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 58999999993 45666799999999998 5999999999999999999999983 57999999999985421
Q ss_pred CC---------CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCC------------cccccccccCCceE
Q 002660 692 SE---------DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE------------KVLTPAEQLSTNYC 750 (895)
Q Consensus 692 ~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~k 750 (895)
.. ..... +...+..+.++.++........ ....... .............|
T Consensus 73 ~~~~~~~~~~~~~~~i--------~~~~l~~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 143 (225)
T TIGR02461 73 FPFPVGAGREVGNYEV--------IELGKPVAKIRAALKEAENEYG-LKYYGNSTAEEVEKLTGLPRELAPLAKRREYSE 143 (225)
T ss_pred ccccccccccCCCeEE--------EEcCCCHHHHHHHHHHHHHhcC-ccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCC
Confidence 00 00000 1111222222322221111000 0000000 00000000011222
Q ss_pred EEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCC--CcccEEEEecCCCCCCc
Q 002660 751 YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDY 828 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi--~~~~viaf~Gd~nn~D~ 828 (895)
+.+.. ++ ..+.++.+.+.. ..+.++.+. .++++ +.++|||.|++.|++++++ +.+++++ +||+.| |
T Consensus 144 i~~~~-~~---e~~~~~~~~~~~--~~~~~~~s~--~~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D- 211 (225)
T TIGR02461 144 TIFLW-SR---EGWEAILVTARA--RGLKYTHGG--RFYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D- 211 (225)
T ss_pred cccCC-CH---HHHHHHHHHHHH--cCCcEEECC--EEEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-
Confidence 22221 11 234455555532 234444443 35676 5599999999999999987 6668999 777777 7
Q ss_pred cccccCcceEEEec
Q 002660 829 EGLLGGVHKTVILK 842 (895)
Q Consensus 829 ~eMl~~ag~gVaMg 842 (895)
++||+.+|+||++|
T Consensus 212 ~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 212 FPMFEVVDLAFLVG 225 (225)
T ss_pred HHHHHhCCCcEecC
Confidence 99999999999986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-17 Score=167.31 Aligned_cols=390 Identities=18% Similarity=0.265 Sum_probs=256.7
Q ss_pred CCCchhHHHHHHHHHHhcC-CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 27 DTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~-G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
-.||-|+++..-.+.+.+. ++ +...|+|..++- .+.+.+.... ...+....++++.++.+.. ++
T Consensus 55 AGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k--~~F~idlDs~nI~Fi~Lk~----R~ 119 (465)
T KOG1387|consen 55 AGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVK--NKFDIDLDSDNIFFIYLKL----RY 119 (465)
T ss_pred CCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHH--HhcCceecccceEEEEEEe----ee
Confidence 3578899998888887764 32 455556554321 1222221100 0011222345777777654 34
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc--ccchhHHHHHhccCCCCEEEEeCCCch--hh
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY--ADAGDSAALLSGALNVPMLFTGHSLGR--DK 181 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~--~~~~~~~~~~~~~~~ip~v~t~H~~~~--~~ 181 (895)
+-....|++..- +.+.+....-...++-+ ..|||..-.. +++-.+ ++...++|++...|-... +.
T Consensus 120 lVea~~~~hfTl-lgQaigsmIl~~Eai~r-------~~Pdi~IDtMGY~fs~p~---~r~l~~~~V~aYvHYP~iS~DM 188 (465)
T KOG1387|consen 120 LVEASTWKHFTL-LGQAIGSMILAFEAIIR-------FPPDIFIDTMGYPFSYPI---FRRLRRIPVVAYVHYPTISTDM 188 (465)
T ss_pred eeecccccceeh-HHHHHHHHHHHHHHHHh-------CCchheEecCCCcchhHH---HHHHccCceEEEEecccccHHH
Confidence 444456666532 22222111111112222 6799877543 332222 233458999999995432 11
Q ss_pred HHHHHH---HhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCC
Q 002660 182 LEQLLK---QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 258 (895)
Q Consensus 182 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~ 258 (895)
...+.. .+.+.+.. -..|+++..+ -..+-..||.|.+.|.+........+..+
T Consensus 189 L~~l~qrq~s~~l~~~K-laY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~--------------------- 244 (465)
T KOG1387|consen 189 LKKLFQRQKSGILVWGK-LAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN--------------------- 244 (465)
T ss_pred HHHHHhhhhcchhhhHH-HHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc---------------------
Confidence 222221 11111111 1234444444 34566799999999887776666665432
Q ss_pred CCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 002660 259 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGEC 338 (895)
Q Consensus 259 ~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l 338 (895)
++.+++|+-+.+........ ...+.+.++++|.+.|+|+.. +|+.++..
T Consensus 245 ---~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 245 ---TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred ---ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 67788877777643321100 124568899999999999999 55555544
Q ss_pred ccccCC----CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC
Q 002660 339 RPLREL----ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA 413 (895)
Q Consensus 339 ~~~~~~----~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps 413 (895)
..+.+. +++.| ++|+....+ .++.+..+..++..+++..+|.|...+|.+++..+|..| .+.|++-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRnee-----D~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~M 364 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRNEE-----DEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTM 364 (465)
T ss_pred HhcCchhhccCCceEEEEeccCChh-----hHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhh
Confidence 433444 34554 677765533 467789999999999999999999999999999999999 8999999
Q ss_pred CCCCCchHHHHHHHcCCCEEEcCCCCch-hccccC---CCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhc
Q 002660 414 FIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRVL---DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHL 488 (895)
Q Consensus 414 ~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-eiv~~~---~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~ 488 (895)
+.|-||+.+.||||+|+-+|+.+.||+. ||+.+. .+|++.. +.++.|++|.+++. +++++..+++++|..+.+
T Consensus 365 wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 365 WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLAR 442 (465)
T ss_pred hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988864 666542 3688874 77899999999998 777788999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCC
Q 002660 489 FSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 489 ~s~~~~a~~~~~~~~~~~~~ 508 (895)
|+=....+.|...+..+++.
T Consensus 443 FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 443 FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred hhHHHHHHhHhHHHHHhhcc
Confidence 99999999999998888764
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=182.44 Aligned_cols=221 Identities=10% Similarity=0.022 Sum_probs=134.8
Q ss_pred cCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 611 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 611 ~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
++++||||+||||. ..+++.++++|++|.+. +++.|+|+|||++..+...+ .++ .-+++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~---~~~---~~~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGV---KLP---GLGLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccC---CCC---ceeEEeecC
Confidence 57899999999992 23568899999999987 47889999999887765433 221 125999999
Q ss_pred ceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHH---hhhhhccccccccCCcccccccccCCceEEEEEeeCC-
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKP- 758 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~- 758 (895)
++++..+... .+. .... ....|. +...++.+ ..++...+. ..+.++++++..
T Consensus 73 ~~~~~~g~~~---~~~---~~~~-~~~~~~-~~~~~l~~~~~~~pG~~iE~----------------K~~s~~~hyr~a~ 128 (244)
T TIGR00685 73 CEMKDNGSCQ---DWV---NLTE-KIPSWK-VRANELREEITTRPGVFIER----------------KGVALAWHYRQAP 128 (244)
T ss_pred EEEecCCCcc---eee---echh-hhhhHH-HHHHHHHHHHhcCCCcEEEe----------------cceEEEEEeccCC
Confidence 9988633110 000 0000 001222 22222222 222322222 245677777544
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--- 835 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a--- 835 (895)
+......++.+.+........+....+..++|+.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 129 d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~~~~ 205 (244)
T TIGR00685 129 VPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVVNNQ 205 (244)
T ss_pred CcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHHhcc
Confidence 211111122222222111112233334458999999999999999999999999888877 777777 7 9999988
Q ss_pred -----ceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 -----HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 -----g~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+.+|+|+.+. . +..+.|+.+++ +.+...|+.+
T Consensus 206 ~~~~g~~~v~v~~g~----~-----------------~~~A~~~~~~~--~~v~~~L~~l 242 (244)
T TIGR00685 206 WGNYGFYPVPIGSGS----K-----------------KTVAKFHLTGP--QQVLEFLGLL 242 (244)
T ss_pred cCCCCeEEEEEecCC----c-----------------CCCceEeCCCH--HHHHHHHHHH
Confidence 6899996222 1 23455676755 4477777654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=181.56 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=116.6
Q ss_pred ccCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhC-CCCCCCCCEEEEcCCceE
Q 002660 610 RRKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-HLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 610 ~~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l-~l~~~~~d~~I~~nGa~I 685 (895)
..+.++++|||||| .+.+++.+++++++|+++ +.|++||||++..+.+.+... .. .++++||+||+.|
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-----i~fviaTGR~~~~~~~~~~~~~~~---~~~~~I~~NGa~i 76 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-----VTVGVVGGSDLSKISEQLGKTVIN---DYDYVFSENGLVA 76 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-----CEEEEECCcCHHHHHHHhcccccc---cCCEEEECCceEE
Confidence 34567779999999 356889999999999853 999999999999888777654 22 1247999999999
Q ss_pred eeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEee------CCC
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQ------KPG 759 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------~~~ 759 (895)
+..+. .... ..+......+.+.+++..................+.+........+...... +..
T Consensus 77 ~~~g~------~i~~----~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~ 146 (245)
T PLN02423 77 HKDGK------LIGT----QSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFE 146 (245)
T ss_pred EeCCE------EEEE----ecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHH
Confidence 85431 1100 0011111112222222211100000000000000000000000000000000 000
Q ss_pred ----CCccHHHHHHHHHhccCeEEEEEecCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 760 ----MTPPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 760 ----~~~~~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
......++.+.+......+.++.+.++ .++||+|+|+|||.||+.|+ +++++|| ||| +.| | +|
T Consensus 147 ~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~N-D-~e 218 (245)
T PLN02423 147 KYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGGN-D-HE 218 (245)
T ss_pred hhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCCC-c-HH
Confidence 011223444555443344566666552 49999999999999999999 8999999 555 566 6 99
Q ss_pred cccC-cceEEEecC
Q 002660 831 LLGG-VHKTVILKG 843 (895)
Q Consensus 831 Ml~~-ag~gVaMgN 843 (895)
||+. .-.++++.+
T Consensus 219 Ml~~~~~~~~~~~~ 232 (245)
T PLN02423 219 IFESERTIGHTVTS 232 (245)
T ss_pred HHhCCCcceEEeCC
Confidence 9997 556777754
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8e-16 Score=169.83 Aligned_cols=289 Identities=26% Similarity=0.323 Sum_probs=206.4
Q ss_pred CcEEEeccccchh---HHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 145 PVAIHGHYADAGD---SAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 145 pDvVh~h~~~~~~---~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
+|++|.+...... .........+.+.+...|............. .... .. .. ..... ........+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~-~~~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLL--LLLG-LL-RL-LLKRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccch--hhHH-HH-HH-HHHHH--HHhccccccEEEE
Confidence 5999988763333 3455666678899999998765321110000 0000 00 00 00000 1111225788888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.+............. .++.++|++++.+.+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 887553322111110 168899999999988652100
Q ss_pred HHhhhhcCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 302 SEIMRFFTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 302 ~~~~~~~~~~~--~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
..++ ...++++||+.+.||++.+++++..+....+. +. +++|.++.. ...+...+..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 1122 37999999999999999999999999642222 33 477877642 13344577777
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 458 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~ 458 (895)
+..+++.|+|.++.+++..+|+.| |++++|+..|+||++++|||++|+|||+++.++..+++.++.+|+++.+.+.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999878899999999 9999999889999999999999999999999999999988767888877789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~ 507 (895)
+++++++..++++++.++.+...+++.+ +.|+|+..+..+.+.+.....
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999888888887677777 699999999999999887643
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.8e-17 Score=168.99 Aligned_cols=119 Identities=31% Similarity=0.449 Sum_probs=96.5
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCC-CH
Q 002660 318 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS-DV 395 (895)
Q Consensus 318 ~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~-el 395 (895)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+... ......+...+...+|.+.+.++.+ ++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999996433 45554 77876542 2222335667778899999998554 45
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 396 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 396 ~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
..+++.| |++++|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888899875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=169.28 Aligned_cols=250 Identities=18% Similarity=0.129 Sum_probs=147.1
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
+|+||+||||||. ....+.++++|++|+++ |+.|++||||++.++..+++++++. +++||+||+.|+..
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 4799999999993 45778899999999998 5999999999999999999999984 58999999999977
Q ss_pred cCCCCC-C---C-cccchhhHHHhhcccCcchHHHHHHhhhhhcccc-ccccC--Cccc------ccc---cccCCceEE
Q 002660 689 TLNSED-G---P-FVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDK-KAESG--EKVL------TPA---EQLSTNYCY 751 (895)
Q Consensus 689 ~~~~~~-~---~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~------~~~---~~~~~~~k~ 751 (895)
...... . . ...+..|. +........++..+..+....... ..... ...+ ... ...+..|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 432100 0 0 01111110 111111233444443332211000 00000 0000 000 001233333
Q ss_pred EEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeec------------------C---CCChHHHHHHHHHHhC
Q 002660 752 AFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP------------------V---LASRSQALRYLYLRWG 810 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p------------------~---g~sKg~al~~L~~~~g 810 (895)
.+...+.+ +.+.+.+.+.+.++ + .+++++-++. . +++||.|++.|.+.|.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~--~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL--T--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE--E--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33332111 12366666654332 2 3334777775 5 9999999999999987
Q ss_pred CCcc--cEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHH
Q 002660 811 VELS--KMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLE 888 (895)
Q Consensus 811 i~~~--~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~ 888 (895)
-... .+++ .||+.| | ++||+++.++|++.+-.....-|+ |- .+ +-+...+... .|......|=.+++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~~~-~~---~l--~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLWKE-AL---RL--GGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcccc-cc---cc--cCcccCccce-ecCCCCcHHHHHHHH
Confidence 6522 5777 899999 9 999999999999977662221000 00 00 0011122333 667778888888876
Q ss_pred Hh
Q 002660 889 QL 890 (895)
Q Consensus 889 ~~ 890 (895)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 65
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.9e-17 Score=174.69 Aligned_cols=204 Identities=12% Similarity=0.136 Sum_probs=127.3
Q ss_pred cccCeEEEEEecCCCC---c-----chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST---T-----GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~---~-----~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..++.+||+|+||||. . .+++.++++|++|+ + ++.|+|+|||++..+.+++.-.+ -++|++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~ 176 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGS 176 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEc
Confidence 3567899999999994 2 57889999999999 4 47899999999999998853322 379999
Q ss_pred CCceEeeccCCCCC-------CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEE
Q 002660 681 SGSDLYYSTLNSED-------GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 753 (895)
Q Consensus 681 nGa~I~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 753 (895)
||++|......... ........|...+..- ...+.......++...+. ..+.+++
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~L~~~~~~~pGa~VE~----------------K~~~vav 238 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV--YRQLLEKTKSTPGAKVEN----------------HKFCASV 238 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEe----------------cCcEEEE
Confidence 99999865321000 0000011121111100 011112222233333333 2677888
Q ss_pred EeeCCCCCccHHHHHHHHHhccCeE-EEEEecCCeeEEeecC-CCChHHHHHHHHHHhCCCc--ccEEEEecCCCCCCcc
Q 002660 754 SVQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDYE 829 (895)
Q Consensus 754 ~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~~gi~~--~~viaf~Gd~nn~D~~ 829 (895)
|++..+. ....++...+.....+. .+...++.+.+||.|. +++||.|+++|++.++... ..+.+|+||+-+ | +
T Consensus 239 HyR~ad~-~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-E 315 (366)
T PLN03017 239 HFRCVDE-KKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-E 315 (366)
T ss_pred EcCcCCH-HHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-H
Confidence 8865432 12233333333211111 1334456669999995 9999999999999998764 346677888886 8 9
Q ss_pred ccccCc-----ceEEEecCc
Q 002660 830 GLLGGV-----HKTVILKGI 844 (895)
Q Consensus 830 eMl~~a-----g~gVaMgNa 844 (895)
+||+.+ |+||.+|..
T Consensus 316 DaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 316 DAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHhhcCCceEEEECCC
Confidence 999976 578888853
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.8e-16 Score=170.63 Aligned_cols=246 Identities=12% Similarity=0.062 Sum_probs=164.5
Q ss_pred CCC-cEEEeccccc-h--hHHHH--HhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhccc
Q 002660 143 VWP-VAIHGHYADA-G--DSAAL--LSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 216 (895)
Q Consensus 143 ~~p-DvVh~h~~~~-~--~~~~~--~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a 216 (895)
.+| |+||.+++.. + +.... ..++.++|+|+++|+.++..... .+ ..+ ..|+..++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 456 9999998732 2 11222 22344899999999987643110 00 011 2266779999
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
|.|+++|+...+.+... |.+..++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc-----------------
Confidence 99999999887776432 22223677776554332111100
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
....++.|+|+|++...+++ .. . .+...+ +++|+++..+
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l----~~---~---~~~~~l-~i~G~g~~~~------------------ 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFL----KN---W---SQGIKL-TVFGPNPEDL------------------ 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHH----Hh---c---CCCCeE-EEECCCcccc------------------
Confidence 01345689999999843321 11 1 222233 4789886421
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCchHHHHHHHcCCCEEEcCCCCchhccc
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-F----------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 445 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~----------~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~ 445 (895)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.++..++|.
T Consensus 204 --~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~ 276 (333)
T PRK09814 204 --ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIV 276 (333)
T ss_pred --ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHH
Confidence 245689999999999999999874 333332 1 2357888999999999999999999999999
Q ss_pred cCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 002660 446 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 497 (895)
Q Consensus 446 ~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~ 497 (895)
++.+|++++ +.++++++|.++ +++++++|++++++..+++.-....++
T Consensus 277 ~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 277 ENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred hCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 999999997 778999999885 457788999999988865554444444
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=178.05 Aligned_cols=249 Identities=14% Similarity=0.028 Sum_probs=154.8
Q ss_pred CCCcEEEecccc-chhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
++||+||++... ........++..++|++++.|...... . ....+ ...+.+|.+++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~----------~-------~~~~~------~~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW----------R-------QGRAF------KIAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc----------C-------chHHH------HHHHHHhhhee
Confidence 789999998642 222223345567999998766431100 0 00111 13567899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+++...+.+.. + |. ++.+++|++....... ....
T Consensus 141 ~~~~~~~~~~~-~----------------------g~---~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-L----------------------GV---PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-c----------------------CC---CeEEECcCHHHhcccc--------------------cChH
Confidence 98765544321 1 11 4556665553221110 0011
Q ss_pred HHhhhhcCCCCCcEEE-EEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHh
Q 002660 302 SEIMRFFTNPRKPVIL-ALA-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 377 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il-~vg-rl~~~-Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~ 377 (895)
..+.+++.++++++++ +.| |.... ++++.+++|++.+.+.. +++.+ ++|+.+. ...++.+.+.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~--~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY--PDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEecCChh----------hHHHHHHHHhh
Confidence 2334455556666644 444 44443 45789999999885433 34444 4444221 12344555555
Q ss_pred c-CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-----------------CCCC
Q 002660 378 Y-DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-----------------KNGG 439 (895)
Q Consensus 378 ~-~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-----------------~~gg 439 (895)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|+. ..++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 5 443 4442 35899999999 9999987 78888999999999987 4566
Q ss_pred chhccccCC--CeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 002660 440 PVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 440 ~~eiv~~~~--~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~ 487 (895)
..+++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 677776543 456777889999999999999999999999988755553
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=179.52 Aligned_cols=274 Identities=14% Similarity=0.061 Sum_probs=174.5
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|. +..++.++.+++.+|+|++++.++.-.... ...++.. ..++ ...+.+|.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~-----~~~~~~~-------~~r~-----~~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDR-----YSPMPEE-------INRQ-----LTGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCC-----CCCCccH-------HHHH-----HHHHHHHhccC
Confidence 7899999996 466777888889999999876554311000 0000000 0111 12335899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+|+...+.+.+. |.+.+++.+++||+ |...+..... . .
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~~-~-----------------~ 186 (365)
T TIGR00236 148 PTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEIA-Y-----------------S 186 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhhc-c-----------------c
Confidence 999877766432 33345899999996 4322211100 0 0
Q ss_pred hHHhhhhcCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 301 WSEIMRFFTNPRKPVILALA-RP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vg-rl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
...+.+++ .+++++++.+ |. ...||+..+++|+..+....++..+ ++++.+.. + .... +.+.+
T Consensus 187 ~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~-vi~~~~~~-~--------~~~~---~~~~~ 251 (365)
T TIGR00236 187 SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQI-VYPVHLNP-V--------VREP---LHKHL 251 (365)
T ss_pred hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEE-EEECCCCh-H--------HHHH---HHHHh
Confidence 01122232 2345566555 43 2458999999999988533333333 33333211 0 1111 22334
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-CCCCchhccccCCCeEEeCCCC
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+..++|.|.+.++..++..+|+.| |+++.+| |..++|||+||+|||++ +.|+..+++..+ .++++ +.|
T Consensus 252 ~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d 320 (365)
T TIGR00236 252 GDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTD 320 (365)
T ss_pred CCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCC
Confidence 556789999999888999999999 9998876 56689999999999996 678888888754 56666 579
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 500 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~ 500 (895)
+++++++|.+++++++.+++++++...+....+++++++.+.+
T Consensus 321 ~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 321 KENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9999999999999998888877655322234555555555443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-16 Score=175.74 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=164.2
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|.. ...+.+..+++..++|++++.|+..... .+. .. ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~-~~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGM-PD-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCC-Cc-------hHHHH-----HHHHHhhhccC
Confidence 67999999964 4556677788888999998776532110 000 00 01111 13567899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+|+...+.+.+ +|.+..++.+++|++ |...+.+.....
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~kI~vign~v~d~~~~~~~~~~~------------------ 186 (363)
T cd03786 148 PTEEARRNLLQ-----------------------EGEPPERIFVVGNTMIDALLRLLELAKK------------------ 186 (363)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEECchHHHHHHHHHHhhcc------------------
Confidence 99877666433 233445899999985 543332111000
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEE-ecCCCccccccchHHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~liv-G~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
...++.++.++++.++++.+|... .||++.+++|+..+.. . ++.+++ |.++. ..++.+.+.
T Consensus 187 ~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~~-----------~~~l~~~~~ 251 (363)
T cd03786 187 ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPRT-----------RPRIREAGL 251 (363)
T ss_pred chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCCh-----------HHHHHHHHH
Confidence 001123334444557778898775 7999999999998842 1 454443 33321 244555666
Q ss_pred hcCC-CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCCCeEEeC
Q 002660 377 KYDL-YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 377 ~~~l-~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~~g~lv~ 454 (895)
++++ .++|.|.+..+.+++..+|+.| |++|.+|- | +..||+++|+|+|++.. +...+++.++ .+..+.
T Consensus 252 ~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~ 321 (363)
T cd03786 252 EFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG 321 (363)
T ss_pred hhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC
Confidence 6665 5689999988888999999999 99999983 4 47899999999999874 4455665432 233332
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARC 478 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~ 478 (895)
.|+++++++|.++++++..+..+
T Consensus 322 -~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 322 -TDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred -CCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999988766554
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-15 Score=176.39 Aligned_cols=336 Identities=15% Similarity=0.144 Sum_probs=218.3
Q ss_pred CCCcEEEeccccchhHHHHHhcc--------------CCCCEEEEeCCCchhhHH----HHHHH------h--hccHHHH
Q 002660 143 VWPVAIHGHYADAGDSAALLSGA--------------LNVPMLFTGHSLGRDKLE----QLLKQ------A--RLSRDEI 196 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~--------------~~ip~v~t~H~~~~~~~~----~~~~~------~--~~~~~~~ 196 (895)
.+||+||+|.|.++++...+.+. ....+|+|.|+..++-.+ .++.. . .++...+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 57999999999888777664221 136689999998765531 11110 0 0011111
Q ss_pred Hhhhhhh----HHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCC
Q 002660 197 NATYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 272 (895)
Q Consensus 197 ~~~~~~~----~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~ 272 (895)
....... ..+..-+.++..||.|.++|+...+-..+....+.+..+ ....++.-|-||||+
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~---------------~~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYE---------------EEEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcc---------------cccCCccceeCCccc
Confidence 0000000 112234568899999999999777633332222111000 001158889999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC------------------CCCchhH----Hhhh----------------------h-
Q 002660 273 HHIVPQDGDMDGETEGNEDNPAS------------------PDPPIWS----EIMR----------------------F- 307 (895)
Q Consensus 273 ~~f~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~----~~~~----------------------~- 307 (895)
..+.+..... ....+....+. ..-.... .+.+ +
T Consensus 305 ~~W~~~~~~~--l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~g 382 (601)
T TIGR02094 305 PTWVAPELRD--LYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATD 382 (601)
T ss_pred cccCCHHHHH--HHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhc
Confidence 9987532110 00000000000 0000000 1111 1
Q ss_pred -cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCc
Q 002660 308 -FTNPRKPVILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383 (895)
Q Consensus 308 -~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~--~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 383 (895)
...++.+++++++|+...||.++++.++.++.+. .+...+++ ++|.+...+.+ ..++...+..+.++....++
T Consensus 383 l~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~k 459 (601)
T TIGR02094 383 RFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRGR 459 (601)
T ss_pred cccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCCC
Confidence 1456788999999999999999999999888532 22233554 66777543332 35677788888877667778
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC------
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP------ 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~-ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p------ 455 (895)
|.|....+..--..+|+.| |++++ |+. +|++|++-+=||..|.+.+++..|...|.. ++.+|+.+.+
T Consensus 460 v~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~ 534 (601)
T TIGR02094 460 IVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDD 534 (601)
T ss_pred EEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccc
Confidence 8887665443344455556 99999 888 999999999999999999999999988876 6689999984
Q ss_pred ------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 456 ------HDQQSVADALLKLV-----AD-----KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ------~d~~~la~ai~~ll-----~~-----~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||++++++|.+.|-
T Consensus 535 ~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 535 EEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 78899999997765 23 667999999999987 69999999999998873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=169.81 Aligned_cols=204 Identities=11% Similarity=0.147 Sum_probs=127.4
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+++.+||+|+||||. ..+++.++++|++|.+. ..|+|+|||++..+.+++.-.++ +++++
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~-----~~vaIvSGR~~~~l~~~~~~~~l------~laGs 163 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC-----FPTAIVSGRCREKVSSFVKLTEL------YYAGS 163 (354)
T ss_pred cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC-----CCEEEEECCCHHHHHHHcCCccc------eEEEe
Confidence 4567899999999992 36788999999999853 68999999999999998865454 69999
Q ss_pred CCceEeeccCCCC---C---CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEE
Q 002660 681 SGSDLYYSTLNSE---D---GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS 754 (895)
Q Consensus 681 nGa~I~~~~~~~~---~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 754 (895)
||+++........ . ........|...+..- ...+.+.....++...+. ..+++++|
T Consensus 164 HG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~~VE~----------------K~~slavH 225 (354)
T PLN02151 164 HGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGAKVEN----------------NKFCASVH 225 (354)
T ss_pred CCceeecCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEe----------------cCcEEEEE
Confidence 9999875421100 0 0001111222111100 001111112233333333 26778888
Q ss_pred eeCCCCCccHHHHHHHHHhccCeE-EEEEecCCeeEEeecC-CCChHHHHHHHHHHhCCCcc--cEEEEecCCCCCCccc
Q 002660 755 VQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVELS--KMVVFVGESGDTDYEG 830 (895)
Q Consensus 755 ~~~~~~~~~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~~gi~~~--~viaf~Gd~nn~D~~e 830 (895)
++..+.. ...++...+....... .+...++.+.+||.|. ++|||.|+++|++.++..-. .+.+|+||+-+ | ++
T Consensus 226 YR~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-ED 302 (354)
T PLN02151 226 FRCVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-ED 302 (354)
T ss_pred eCCCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HH
Confidence 8654321 1233334333211111 1334456569999995 99999999999999886532 45677888886 9 99
Q ss_pred cccCc-----ceEEEecCc
Q 002660 831 LLGGV-----HKTVILKGI 844 (895)
Q Consensus 831 Ml~~a-----g~gVaMgNa 844 (895)
||+.+ |+||-+|..
T Consensus 303 aF~~L~~~~~G~gI~Vg~~ 321 (354)
T PLN02151 303 AFKILRDKKQGLGILVSKY 321 (354)
T ss_pred HHHHHhhcCCCccEEeccC
Confidence 99864 667777643
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-14 Score=144.78 Aligned_cols=374 Identities=15% Similarity=0.132 Sum_probs=237.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccCCC
Q 002660 34 YVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWP 113 (895)
Q Consensus 34 ~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~ 113 (895)
.+..=|..|++.| .+|+++.-..+.| . +++...+.++|+.+|.-|.-.+. |
T Consensus 28 RMqYHA~Sla~~g--f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~------p 78 (444)
T KOG2941|consen 28 RMQYHALSLAKLG--FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGG------P 78 (444)
T ss_pred HHHHHHHHHHHcC--CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCC------c
Confidence 4556677888899 9999996542211 1 22334679999999865531111 1
Q ss_pred ChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc---cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhh
Q 002660 114 HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA---DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQAR 190 (895)
Q Consensus 114 ~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~---~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~ 190 (895)
.+-...-+++..+..+..+|.. -..||+|....+ ....++...+...|.+++++.|++++. ..--+..|.
T Consensus 79 ~~~~l~lKvf~Qfl~Ll~aL~~------~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~ 151 (444)
T KOG2941|consen 79 RVLFLPLKVFWQFLSLLWALFV------LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGF 151 (444)
T ss_pred hhhhhHHHHHHHHHHHHHHHHh------ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCC
Confidence 1111122222222222222222 156999999876 345555666678899999999998775 111122222
Q ss_pred ccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCE------E
Q 002660 191 LSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRM------A 264 (895)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v------~ 264 (895)
. ...-+..+++ |+..-+.||.-+|+|+.+.+++...++-. +-...|.+|.++- +
T Consensus 152 ~-----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps~~~~l~~~H 211 (444)
T KOG2941|consen 152 Q-----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPSKPTPLDEQH 211 (444)
T ss_pred C-----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCCCCCchhHHH
Confidence 1 1122344444 77788999999999999888876655411 1122233333200 0
Q ss_pred --EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhh------hcCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 002660 265 --IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR------FFTNPRKPVILALARPDPKKNITTLVKAFG 336 (895)
Q Consensus 265 --vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~ 336 (895)
..+-+-|...|.... ++.+........++ ........++++.....+..++..|++|+.
T Consensus 212 ~lf~~l~~d~~~f~ar~-------------~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~ 278 (444)
T KOG2941|consen 212 ELFMKLAGDHSPFRARE-------------PQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALV 278 (444)
T ss_pred HHHhhhccccchhhhcc-------------cccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHH
Confidence 111112222222110 00011111111111 112334557778888999999999999998
Q ss_pred hc-----ccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEE
Q 002660 337 EC-----RPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410 (895)
Q Consensus 337 ~l-----~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v 410 (895)
.. .+....|++. +|.|.||. .+...+.+.+++|...-....++..+|.+.++..|+ .+|++
T Consensus 279 ~y~~~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcL 345 (444)
T KOG2941|consen 279 IYEEQLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCL 345 (444)
T ss_pred hhhhhhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEe
Confidence 43 2234456765 46688885 355667888899987777789999999999999992 23566
Q ss_pred ecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Q 002660 411 NPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKN 485 (895)
Q Consensus 411 ~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~ 485 (895)
++|. .=-.|++++....||+||+|-+.....|+|+++.||++++ |.+++++.|.-+++ +.....++.++.++.
T Consensus 346 HtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 346 HTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred eecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 6654 2347899999999999999999999999999999999998 99999999999998 778888888888887
Q ss_pred hhcCCHH
Q 002660 486 IHLFSWP 492 (895)
Q Consensus 486 ~~~~s~~ 492 (895)
. ...|+
T Consensus 424 ~-e~RW~ 429 (444)
T KOG2941|consen 424 Q-ELRWD 429 (444)
T ss_pred H-hhhHH
Confidence 4 34443
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.7e-16 Score=158.70 Aligned_cols=193 Identities=12% Similarity=0.152 Sum_probs=129.9
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+++++||+|+||||+ ..+.+.++++|+.|..+ .++.++|.|||+...+..++.-.++ ++||+
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~ae 85 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIAE 85 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEEe
Confidence 7889999999999993 45678899999999998 4678999999999999999986565 59999
Q ss_pred CCceEeeccC-CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCC
Q 002660 681 SGSDLYYSTL-NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 759 (895)
Q Consensus 681 nGa~I~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 759 (895)
||+++..... +........+..|...+. +.++..+.+++++..+.+ .+.+.||++..+
T Consensus 86 hGa~~r~~~g~~~~~~~~~~~~~~~~~v~-----~~l~~~v~r~pGs~iE~K----------------~~a~~~Hyr~a~ 144 (266)
T COG1877 86 HGAEVRDPNGKWWINLAEEADLRWLKEVA-----AILEYYVERTPGSYIERK----------------GFAVALHYRNAE 144 (266)
T ss_pred cceEEecCCCCeeEecCHHHHhhHHHHHH-----HHHHHHhhcCCCeEEEEc----------------CcEEEEeeccCC
Confidence 9999964432 111111111122322221 234455556666665554 455667775444
Q ss_pred CCc-cHHHHHHHHHhccCe-EEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 002660 760 MTP-PVKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 760 ~~~-~~~~l~~~l~~~~~~-~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
... ....+.......... +++ ..+...+|+.|.++|||.++++++++...+- .++.|.||+-+ | ++||+++.
T Consensus 145 ~~~~~~~a~~~~~~~~~~~~~~v--~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~ 218 (266)
T COG1877 145 DDEGAALALAEAATLINELKLRV--TPGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVN 218 (266)
T ss_pred chhhHHHHHHHHHhccccccEEE--EeCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhc
Confidence 221 112222222222221 333 3444599999999999999999999887665 45555788776 8 99999986
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-16 Score=163.36 Aligned_cols=210 Identities=14% Similarity=0.183 Sum_probs=105.4
Q ss_pred EEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 616 VISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 616 ~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
|+|+||||. ..+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ +++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 699999992 45778999999999998 4778999999999996555443344 699999999998
Q ss_pred ccCCCC-CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCC---cc
Q 002660 688 STLNSE-DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT---PP 763 (895)
Q Consensus 688 ~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~ 763 (895)
.+.... ......+..|...+.. .++......++...+.+ .+.+.|+++..... ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~pG~~iE~K----------------~~sv~~Hyr~~~~~~~~~~ 130 (235)
T PF02358_consen 72 PGGSEWTNLPADEDLEWKDEVRE-----ILEYFAERTPGSFIEDK----------------EFSVAFHYRNAPPEFGEAQ 130 (235)
T ss_dssp TTE-EEE-TTGGGGHHHHHHHHH-----HHTTHHHHSTT-EEEEE----------------TTEEEEE-TTS-ST----T
T ss_pred CccccccccccccchHHHHHHHH-----HHHHHHhhccCcEEEEC----------------CeEEEEEecCCCcchhhhH
Confidence 753110 0001111223222211 11122223444444443 56677887654422 13
Q ss_pred HHHHHHHHHhc---cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc---
Q 002660 764 VKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV--- 835 (895)
Q Consensus 764 ~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~--~~~viaf~Gd~nn~D~~eMl~~a--- 835 (895)
..++.+.+... ...+.++ .+...+||.|.+++||.|+++|++.++.. ..++++|+||+-+ | ++||+.+
T Consensus 131 ~~~l~~~l~~~~~~~~~~~v~--~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~~~~~~ 206 (235)
T PF02358_consen 131 ARELAEQLREILASHPGLEVV--PGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHHHHHHH-T-EEE--E-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHHTTTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEE--ECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHHHHHhc
Confidence 44555555432 1234433 33349999999999999999999998764 1234445777665 8 9999984
Q ss_pred ---ceEEEecCccccccccccccCCCCCCC
Q 002660 836 ---HKTVILKGICSSSSNQIHANRSYPLSD 862 (895)
Q Consensus 836 ---g~gVaMgNa~~~~~~~~~a~~~~~~~~ 862 (895)
|++|-++... ...+++..+|+++|
T Consensus 207 ~~~~~~i~V~~~~---~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 207 EEGGFGIKVGSVS---VGEKPTAASYRLDD 233 (235)
T ss_dssp ----EEEEES--------------------
T ss_pred ccCCCCeEEEeec---cccccccccccccc
Confidence 5688888654 34556666677664
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=158.02 Aligned_cols=167 Identities=12% Similarity=0.148 Sum_probs=138.3
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-----------
Q 002660 315 VILALA--RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY----------- 381 (895)
Q Consensus 315 ~il~vg--rl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~----------- 381 (895)
.+++++ |+ +.|.++.+|+|+..+....|...+. +.|.+.+ +. ....+.++++.+++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~-~~gy~~~-~~-------~~~~l~~~i~~~~~~~~~~~~~~~~~ 390 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELK-ILTYNND-ND-------ITQLLEDILEQINEEYNQDKNFFSLS 390 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEE-EEEecCc-hh-------HHHHHHHHHHHHHhhhchhhhccccc
Confidence 455555 99 9999999999999986444444442 4676643 11 123444444444444
Q ss_pred ------------------CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhc
Q 002660 382 ------------------GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI 443 (895)
Q Consensus 382 ------------------~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~ei 443 (895)
..|.|.|..+..++.+.|..| .++|.+|..|+|+ +++||+++|+|+| .-|+.++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~ 462 (519)
T TIGR03713 391 EQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDY 462 (519)
T ss_pred hhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCcee
Confidence 689999997777999999999 9999999999999 9999999999999 6667899
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSR 501 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~ 501 (895)
|.++.||+++ +|..+|+++|..+|.+++.|+++...+.+.+++||-+.+.+++.+.
T Consensus 463 V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 463 VEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999999999 5999999999999999999999999999999999999999888764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.9e-13 Score=156.96 Aligned_cols=187 Identities=16% Similarity=0.204 Sum_probs=147.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPVILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~--~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.+++.++|+++.|+...|+.+++++.+.++.+. .+...+++ +.|.+...+. ..+++...+..+.+.....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHHhCcCCCCcEE
Confidence 456777999999999999999999998887432 22223554 6677643332 23667888888888777778888
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC--------
Q 002660 386 YPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-------- 455 (895)
Q Consensus 386 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p-------- 455 (895)
|+...+..--..+++.| ||+++||+ .|++|++-+=||.-|.+-+++..|...|.- ++.||+.+.+
T Consensus 551 fle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 551 FLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChh
Confidence 87776544445566666 99999999 999999999999999999999999998886 7889999987
Q ss_pred ----CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 456 ----HDQQSVADALLKLVA----D------KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ----~d~~~la~ai~~ll~----~------~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
.|.++|-+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 456667777754332 3 778999999999998 59999999999988766
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=144.59 Aligned_cols=327 Identities=18% Similarity=0.230 Sum_probs=180.1
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHh---------hccHHHHHhhhhhhHHHHHHHhhh
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQA---------RLSRDEINATYKIMRRIEAEELSL 213 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~l 213 (895)
..=|.|+|.|.+|....++.++ ..+.+|||.|....-. .+..+ .+........+.+..+.-.|+.+.
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR---~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGR---YLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHH---HHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhh---HhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 3557899999877766665543 4688999999763322 11111 111233334455666777799999
Q ss_pred cccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 214 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 293 (895)
Q Consensus 214 ~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~ 293 (895)
..||.+.++|+-.+.+-....+. . .=.|+|||++.+.|..... +++..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r-~-----------------------pDvV~pNGl~v~~~~~~~e--------fqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKR-K-----------------------PDVVTPNGLNVDKFPALHE--------FQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTTH--------HHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCC-C-----------------------CCEEcCCCccccccccchH--------HHHHH
Confidence 99999999987655544333221 1 1158999999988764320 00000
Q ss_pred CCCCCchhHHhhhhc-----CC-CCCcEEEEEeCCC-CCCCHHHHHHHHHhcccc----cCCCcEE-EEE----------
Q 002660 294 ASPDPPIWSEIMRFF-----TN-PRKPVILALARPD-PKKNITTLVKAFGECRPL----RELANLT-LIM---------- 351 (895)
Q Consensus 294 ~~~~~~~~~~~~~~~-----~~-~~~~~il~vgrl~-~~Kgi~~ll~A~~~l~~~----~~~~~l~-liv---------- 351 (895)
...........+..+ .+ .+..+|...||.. ..||++.+|+|+.+|... .....++ +|+
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 000111222222221 11 2356788889988 559999999999998531 1122332 333
Q ss_pred ---------------------------------ecCCCccccccch-HH-------------------------HHHHHH
Q 002660 352 ---------------------------------GNRDGIDEMSSTS-AS-------------------------VLLSVL 372 (895)
Q Consensus 352 ---------------------------------G~~~~~~~~~~~~-~~-------------------------~~~~l~ 372 (895)
|.-++.+++-... .- -.+.+.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 1111111110000 00 011233
Q ss_pred HHHHhcCCC----Cc--EEeCC-CCC------CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC
Q 002660 373 KLIDKYDLY----GQ--VAYPK-HHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 439 (895)
Q Consensus 373 ~~~~~~~l~----~~--v~~~g-~~~------~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg 439 (895)
..+.++++. ++ |.|++ +++ .-+..++++.+ |+.|+||.+||||.+.+|+.++|+|-|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 333334432 22 33432 222 23788999999 999999999999999999999999999999988
Q ss_pred chhcccc-----CCCeEEe-CC--CC----HHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 002660 440 PVDIHRV-----LDNGLLV-DP--HD----QQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 440 ~~eiv~~-----~~~g~lv-~p--~d----~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~ 506 (895)
....+.+ ...|+.| +- .+ .+++++.|.+... ++.++..+++++.+..+..+|+.....|.+.+.-.+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7765543 2356544 32 23 3456666666665 556677777777777789999999999999998877
Q ss_pred CCC
Q 002660 507 PRH 509 (895)
Q Consensus 507 ~~~ 509 (895)
++.
T Consensus 584 ~~a 586 (633)
T PF05693_consen 584 RRA 586 (633)
T ss_dssp HHH
T ss_pred Hhc
Confidence 653
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.7e-12 Score=140.69 Aligned_cols=251 Identities=16% Similarity=0.019 Sum_probs=148.5
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|+++.. ...+.....++.+|+|+++++.-- .|.. . ... -+...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~-~waw------~-----------~~~-----~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQ-VWAW------R-----------KWR-----AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCc-Hhhc------C-----------cch-----HHHHHHHHhHhhc
Confidence 78999999875 223334447788899999665211 0100 0 000 1224568899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+++.+.+.+. .+. + ++.++.|++-...... . +...
T Consensus 145 ~~~~e~~~~~-~~g-----------------~--------~~~~vGnPv~~~~~~~-~------------------~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQ-KKN-----------------V--------PCRFVGHPLLDAIPLY-K------------------PDRK 179 (385)
T ss_pred cCCCcHHHHH-hcC-----------------C--------CEEEECCchhhhcccc-C------------------CCHH
Confidence 9886655432 111 1 5667777763221110 0 0111
Q ss_pred HHhhhhcCCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCccccccchHHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~v--grl~~-~Kgi~~ll~A~~~l~~~~~~~~l~l-i-vG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
..+++++.++++++|+.+ +|..+ .|++..+++|++.+.+. .+++.+ + ++++.. ...+.+...
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~--~p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ--EPDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh--CCCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 234456666677777654 37666 78999999999988643 345443 3 333321 123334444
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCch--------------
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV-------------- 441 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~-------------- 441 (895)
.+++...|.+... ++..+|+.| |++|.+| |.+.+|+|+||+|+|... .....
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5554445655433 677899999 9999998 777779999999998872 21111
Q ss_pred --hccccCCCe--EEeCCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhh
Q 002660 442 --DIHRVLDNG--LLVDPHDQQSVADALLKLVADK----QLWARCRQNGLKNIH 487 (895)
Q Consensus 442 --eiv~~~~~g--~lv~p~d~~~la~ai~~ll~~~----~~~~~~~~~~~~~~~ 487 (895)
.++.+.... ++-+--+++.+++++.++++|+ +.++++.+...+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 112111111 1112346889999999999999 877777666555543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-13 Score=131.12 Aligned_cols=131 Identities=31% Similarity=0.440 Sum_probs=92.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 313 KPVILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~-A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
-++|+++|++.+.|+++.+++ |+.++.+.. +++.+ ++|.+++ .++ ++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~l~-----------~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--ELK-----------RL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---HHC-----------CH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--HHH-----------Hh-----cCCCEEEcCCH
Confidence 367999999999999999999 999997544 45554 7788653 111 11 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
+++.++|+.| |+++.|+. .++++.+++|||++|+|||+++. +..+++...+.|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999998 566777656777777 889999999999998
Q ss_pred hC
Q 002660 470 AD 471 (895)
Q Consensus 470 ~~ 471 (895)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-10 Score=125.97 Aligned_cols=335 Identities=15% Similarity=0.139 Sum_probs=203.7
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeE-EEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDK 104 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~-V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~ 104 (895)
.-|||+..-...++++|.++| ++ |.++-.... .++.+ ....++.+..++.++.++
T Consensus 8 gGTGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~~----------~e~~l------------~~~~~~~~~~I~~~~~~~ 63 (357)
T COG0707 8 GGTGGHVFPALALAEELAKRG--WEQVIVLGTGDG----------LEAFL------------VKQYGIEFELIPSGGLRR 63 (357)
T ss_pred CCCccchhHHHHHHHHHHhhC--ccEEEEeccccc----------ceeee------------ccccCceEEEEecccccc
Confidence 358999999999999999999 84 555522110 01111 112377888888765532
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHH
Q 002660 105 YIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQ 184 (895)
Q Consensus 105 ~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~ 184 (895)
+. .+..+... ..++..+.+..+.+.+ ++||+|.+........+...++.+++|++++..+..+-..
T Consensus 64 ~~----~~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a-- 129 (357)
T COG0707 64 KG----SLKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA-- 129 (357)
T ss_pred cC----cHHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh--
Confidence 22 22211111 1222223333333444 8899999988777777788888999999998888744321
Q ss_pred HHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEE
Q 002660 185 LLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA 264 (895)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~ 264 (895)
++ +..+.|+.|.+.-.. .. . +.+.+++.
T Consensus 130 -------------------nk-----~~~~~a~~V~~~f~~-~~----~-----------------------~~~~~~~~ 157 (357)
T COG0707 130 -------------------NK-----ILSKFAKKVASAFPK-LE----A-----------------------GVKPENVV 157 (357)
T ss_pred -------------------HH-----HhHHhhceeeecccc-cc----c-----------------------cCCCCceE
Confidence 11 134556666665542 11 0 11112677
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHH-HhcccccC
Q 002660 265 IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAF-GECRPLRE 343 (895)
Q Consensus 265 vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~-~~l~~~~~ 343 (895)
+..+.|..+.+. .... ..+.. ...++++|+.+|.=-..+.+..++... ..+. .
T Consensus 158 ~tG~Pvr~~~~~-~~~~---------------------~~~~~-~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~---~ 211 (357)
T COG0707 158 VTGIPVRPEFEE-LPAA---------------------EVRKD-GRLDKKTILVTGGSQGAKALNDLVPEALAKLA---N 211 (357)
T ss_pred EecCcccHHhhc-cchh---------------------hhhhh-ccCCCcEEEEECCcchhHHHHHHHHHHHHHhh---h
Confidence 888877766554 1100 00011 112677777776533333344444333 3332 2
Q ss_pred CCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHH
Q 002660 344 LANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI 423 (895)
Q Consensus 344 ~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~ 423 (895)
...+...+|... ..++......++. +.+.++ .++|.++|+.| |++|.= +-++++.
T Consensus 212 ~~~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~ 266 (357)
T COG0707 212 RIQVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIA 266 (357)
T ss_pred CeEEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHH
Confidence 233333445442 2444455555554 666777 57899999999 998855 4679999
Q ss_pred HHHHcCCCEEEcCCCCc--------hhccccCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHH
Q 002660 424 EAAAHGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPE 493 (895)
Q Consensus 424 Ea~a~G~PVvas~~gg~--------~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~ 493 (895)
|..++|+|.|--..+.. ...+++.+.|+++...+ ++.+.+.|.+++.+++..++|..++++....-..+.
T Consensus 267 E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred HHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999999998664332 23445566777776555 889999999999999999999998887765555555
Q ss_pred HHHHHHHH
Q 002660 494 HCKTYLSR 501 (895)
Q Consensus 494 ~a~~~~~~ 501 (895)
+++..+..
T Consensus 347 i~~~~~~~ 354 (357)
T COG0707 347 IADLLLAL 354 (357)
T ss_pred HHHHHHHH
Confidence 55554443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-10 Score=127.89 Aligned_cols=310 Identities=10% Similarity=0.097 Sum_probs=178.0
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
.-|||+..-.+.++++|.++| |+|.++++...- ..+.+ ...|..+..++..+.
T Consensus 9 GGTGGHi~Pala~a~~l~~~g--~~v~~vg~~~~~---------e~~l~-------------~~~g~~~~~~~~~~l--- 61 (352)
T PRK12446 9 GGSAGHVTPNLAIIPYLKEDN--WDISYIGSHQGI---------EKTII-------------EKENIPYYSISSGKL--- 61 (352)
T ss_pred CCcHHHHHHHHHHHHHHHhCC--CEEEEEECCCcc---------ccccC-------------cccCCcEEEEeccCc---
Confidence 469999999999999999998 999999865321 01111 012566666654332
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
++...|..+ .+...++....+..+.+++ .+||+||++.-..+..+...++.+++|+++.-.+..+-.
T Consensus 62 -~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~---- 128 (352)
T PRK12446 62 -RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL---- 128 (352)
T ss_pred -CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH----
Confidence 111111111 1222222222222233333 889999998766666677888889999987665543211
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..+ ...+.++.|++.-+.... . ++. +++.+
T Consensus 129 -----------------~nr-----~~~~~a~~v~~~f~~~~~----~---~~~---------------------~k~~~ 158 (352)
T PRK12446 129 -----------------ANK-----IALRFASKIFVTFEEAAK----H---LPK---------------------EKVIY 158 (352)
T ss_pred -----------------HHH-----HHHHhhCEEEEEccchhh----h---CCC---------------------CCeEE
Confidence 111 246678888876542111 1 111 26777
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCC
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLREL 344 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~ 344 (895)
..+.|..+...... ...++.++..+++++||.+|.=...+.+.. +.+++..+. ..
T Consensus 159 tG~Pvr~~~~~~~~---------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~ 214 (352)
T PRK12446 159 TGSPVREEVLKGNR---------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LK 214 (352)
T ss_pred ECCcCCcccccccc---------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cC
Confidence 77777654332110 112233444567777777765444555533 334444442 22
Q ss_pred CcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 345 ANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 345 ~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
.++++++|... .+ +.. ... .++...+++ .++++++|+.| |++|.- +-+.++.|
T Consensus 215 ~~vv~~~G~~~-~~-----------~~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E 267 (352)
T PRK12446 215 YQIVHLCGKGN-LD-----------DSL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFE 267 (352)
T ss_pred cEEEEEeCCch-HH-----------HHH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHH
Confidence 44544566542 11 111 111 122333542 25899999999 988755 47789999
Q ss_pred HHHcCCCEEEcCCC-----C----chhccccCCCeEEeCCC--CHHHHHHHHHHHHhCHHHHH
Q 002660 425 AAAHGLPIVATKNG-----G----PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 425 a~a~G~PVvas~~g-----g----~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~ 476 (895)
++++|+|.|.-... + ..+.+.+.+.|..+... +++.+.++|.++++|++.++
T Consensus 268 ~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 268 FLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred HHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 99999999987542 1 11233444556665432 57899999999998887643
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-12 Score=127.82 Aligned_cols=169 Identities=20% Similarity=0.222 Sum_probs=87.5
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
+..||+++++.+|+++|+++| |+|+|+|....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 679999999999999999999 9999998865432210 00111111111111
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
. ...........+...+++ .+|||||+|.+.....+..... ++|+|++.|+.+... .
T Consensus 60 --~--~~~~~~~~~~~~~~~i~~--------------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~ 116 (177)
T PF13439_consen 60 --K--RFLRSFFFMRRLRRLIKK--------------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---R 116 (177)
T ss_dssp --S--S--HHHHHHHHHHHHHHH--------------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---H
T ss_pred --c--ccchhHHHHHHHHHHHHH--------------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---c
Confidence 0 001111122222223322 5799999999744444433333 999999999876320 0
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..... .. ....+..++ +....+.+|.++++|+...+++.+ ++ .+..++.|
T Consensus 117 ~~~~~-~~----~~~~~~~~~--~~~~~~~~~~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 166 (177)
T PF13439_consen 117 FLKSK-LS----PYSYLNFRI--ERKLYKKADRIIAVSESTKDELIK-FG----------------------IPPEKIHV 166 (177)
T ss_dssp TTTTS-CC----CHHHHHHCT--THHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred ccccc-cc----hhhhhhhhh--hhhHHhcCCEEEEECHHHHHHHHH-hC----------------------CcccCCEE
Confidence 00000 00 000011111 333478999999999988888766 43 22238999
Q ss_pred eCCCCCCCCCC
Q 002660 266 IPPGMEFHHIV 276 (895)
Q Consensus 266 ip~Gid~~~f~ 276 (895)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-12 Score=127.53 Aligned_cols=160 Identities=28% Similarity=0.383 Sum_probs=88.0
Q ss_pred CchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccccc
Q 002660 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 108 (895)
Q Consensus 29 GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~ 108 (895)
||+++++.+|+++|+++| |+|+|+|+...... ... ...++.+.++|..+. .....
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~-------~~~---------------~~~~~~~~~~~~~~~-~~~~~ 55 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED-------DEE---------------EEDGVRVHRLPLPRR-PWPLR 55 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG--------SE---------------EETTEEEEEE--S-S-SSGGG
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc-------ccc---------------ccCCceEEeccCCcc-chhhh
Confidence 899999999999999999 99999997643211 000 124899999987654 11000
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHH
Q 002660 109 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 188 (895)
Q Consensus 109 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~ 188 (895)
.+ .+...+.+++.. +..+||+||+|++..++++..+++..++|+|++.|+...... .
T Consensus 56 --~~----~~~~~~~~~l~~------------~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-----~ 112 (160)
T PF13579_consen 56 --LL----RFLRRLRRLLAA------------RRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG-----S 112 (160)
T ss_dssp --HC----CHHHHHHHHCHH------------CT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred --hH----HHHHHHHHHHhh------------hccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc-----c
Confidence 11 122222222200 127899999999766666766665789999999998643221 0
Q ss_pred hhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCC
Q 002660 189 ARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 268 (895)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~ 268 (895)
....++.+++ |+..++.||.|+++|+...+.+.+ +. .++ +++.||||
T Consensus 113 --------~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipn 159 (160)
T PF13579_consen 113 --------RWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE---
T ss_pred --------chhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCc
Confidence 0011122333 677899999999999988887765 32 233 39999999
Q ss_pred C
Q 002660 269 G 269 (895)
Q Consensus 269 G 269 (895)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=108.56 Aligned_cols=91 Identities=18% Similarity=0.333 Sum_probs=85.7
Q ss_pred EEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-
Q 002660 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI- 486 (895)
Q Consensus 408 v~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~- 486 (895)
++++|+..+++++.++|+||||+|+|++..++..+++.++..+++++ |++++.++|..++++|++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888899998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 002660 487 HLFSWPEHCKTYLS 500 (895)
Q Consensus 487 ~~~s~~~~a~~~~~ 500 (895)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999999874
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-10 Score=112.65 Aligned_cols=252 Identities=14% Similarity=0.137 Sum_probs=144.0
Q ss_pred cCeEEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 611 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 611 ~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
..++||+|+||||. ....+.....+..|++. |+.|++||..+..++..+-+.+++. +-.+|+.||+.||-+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p 78 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLP 78 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEec
Confidence 45799999999994 34445566777888887 6999999999999999999999984 346999999999976
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccC-C---cccccccc------cCCceEEEEEeeCC
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-E---KVLTPAEQ------LSTNYCYAFSVQKP 758 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~------~~~~~k~~~~~~~~ 758 (895)
..+-..........-..++.-...-+.+++.+..+...+........ . ..++-... ....+..+.+..+.
T Consensus 79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 54321000000000000000011112233333222211110000000 0 00000000 01122222222222
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh-CCCccc-EEEEecCCCCCCccccccCcc
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSK-MVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~-gi~~~~-viaf~Gd~nn~D~~eMl~~ag 836 (895)
+ .....+...|...+ +++.++..+.-+.-....||.|++.+++.+ -.+... +++ .||+.| | .+||+...
T Consensus 159 d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~-~GDg~n-D-~Pl~ev~d 229 (274)
T COG3769 159 D--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLG-LGDGPN-D-APLLEVMD 229 (274)
T ss_pred c--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEe-cCCCCC-c-ccHHHhhh
Confidence 2 22335566666544 344455457788888889999999998775 345555 555 888888 8 99999999
Q ss_pred eEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 837 KTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 837 ~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
..+.++|-.-+- ....++ -+....++..-.-+|..+.|+||.
T Consensus 230 ~AfiV~~lnre~-~~lv~~------------i~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 230 YAFIVKGLNREG-VHLVSS------------IPAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hheeecccchhh-hhcccc------------chhheeeccccCchHHHHHhhhhc
Confidence 999999766111 011111 133344556667789999999874
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.9e-10 Score=108.09 Aligned_cols=182 Identities=16% Similarity=0.106 Sum_probs=115.1
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
|.||++|...|. ++..||.|+.+.+|+..|+++| |+|+|.|+....+.. .
T Consensus 1 mkkIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~-------~----------- 50 (185)
T PF09314_consen 1 MKKIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK-------E----------- 50 (185)
T ss_pred CceEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC-------C-----------
Confidence 458999998887 4678999999999999999999 999999986432211 1
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAAL 161 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~~ 161 (895)
..-.|++++.+|.... .. +..+...+.... .++... ...+.+.||||.+... .+++..+
T Consensus 51 ----~~y~gv~l~~i~~~~~-g~---------~~si~yd~~sl~----~al~~~--~~~~~~~~ii~ilg~~~g~~~~~~ 110 (185)
T PF09314_consen 51 ----FEYNGVRLVYIPAPKN-GS---------AESIIYDFLSLL----HALRFI--KQDKIKYDIILILGYGIGPFFLPF 110 (185)
T ss_pred ----cccCCeEEEEeCCCCC-Cc---------hHHHHHHHHHHH----HHHHHH--hhccccCCEEEEEcCCccHHHHHH
Confidence 1125999999986433 11 122222111111 111000 0012468899999875 3444444
Q ss_pred Hhc--cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 162 LSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 162 ~~~--~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+.+ ..|.|++++.|++.... -+.+.+ ... +++ ..|+.+.+.||.+|+-|+...+.+...|..
T Consensus 111 ~r~~~~~g~~v~vN~DGlEWkR----~KW~~~----~k~---~lk--~~E~~avk~ad~lIaDs~~I~~y~~~~y~~--- 174 (185)
T PF09314_consen 111 LRKLRKKGGKVVVNMDGLEWKR----AKWGRP----AKK---YLK--FSEKLAVKYADRLIADSKGIQDYIKERYGR--- 174 (185)
T ss_pred HHhhhhcCCcEEECCCcchhhh----hhcCHH----HHH---HHH--HHHHHHHHhCCEEEEcCHHHHHHHHHHcCC---
Confidence 443 34779999999984422 111111 111 112 258889999999999999777766666641
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCC
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGME 271 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid 271 (895)
.+..+||+|.|
T Consensus 175 ---------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ---------------------KKSTFIAYGAD 185 (185)
T ss_pred ---------------------CCcEEecCCCC
Confidence 17899999986
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.6e-09 Score=117.51 Aligned_cols=127 Identities=18% Similarity=0.085 Sum_probs=86.3
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 311 PRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 311 ~~~~~il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
...+++++.|+... .+-...+++|+..+ ...+.+.+|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCCCceEEe
Confidence 45667888888754 23445566666654 123434555543210 2345789999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhccccCCCeEEeCCC--CHHHH
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRVLDNGLLVDPH--DQQSV 461 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~~~~g~lv~p~--d~~~l 461 (895)
+++| ...+|..| |++|.- |-..++.||+++|+|+|.....+- ...+...+.|+.+++. +.+++
T Consensus 294 ~~~p---~~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVP---HDWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCC---HHHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 9975 45678889 999843 445899999999999999876552 3344555677777665 68999
Q ss_pred HHHHHHHHhCH
Q 002660 462 ADALLKLVADK 472 (895)
Q Consensus 462 a~ai~~ll~~~ 472 (895)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999853
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-08 Score=114.95 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=138.2
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
....|.||++|+++.+.+...++.. .++.++|-|+=+. +.. .
T Consensus 237 ~~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~~-~------------- 278 (438)
T TIGR02919 237 ETRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FKK-D------------- 278 (438)
T ss_pred ccccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ecc-c-------------
Confidence 3688999999988777776665431 1677888886522 110 0
Q ss_pred CCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 293 PASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
....+-+++++. ...|++++.+.+ ..|++.+=+|.+.+. ..+|.
T Consensus 279 -----------------~r~~~~~l~~t~-------s~~I~~i~~Lv~--~lPd~~f~Iga~te~----------s~kL~ 322 (438)
T TIGR02919 279 -----------------NKYRKQALILTN-------SDQIEHLEEIVQ--ALPDYHFHIAALTEM----------SSKLM 322 (438)
T ss_pred -----------------cCCcccEEEECC-------HHHHHHHHHHHH--hCCCcEEEEEecCcc----------cHHHH
Confidence 112334555551 889999998864 445666533666531 14555
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCCCeE
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGL 451 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~~g~ 451 (895)
++ .++ ...+.|++.. ..++.++|..| |+++.++..|++++++.||+..|+||++.+. -|..+++.+ |.
T Consensus 323 ~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~ 391 (438)
T TIGR02919 323 SL-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---EN 391 (438)
T ss_pred HH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cc
Confidence 55 555 3445555554 45899999999 9999999999999999999999999999874 355677654 88
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHH
Q 002660 452 LVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWP 492 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~ 492 (895)
+++.+++++|+++|.++|++++.+++.-..-++.+..-+.+
T Consensus 392 l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 392 IFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred eecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999988777655555555444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.8e-10 Score=108.89 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=60.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 876 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 876 (895)
+|..+++.+++++|++++++++ +||+.| | ++|++.+|++++|.|+. +.. ++.++++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~--~~~-----------------~~~a~~i~~ 133 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLL-----------------IPRADYVTR 133 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcC--HHH-----------------HHhCCEEec
Confidence 4788999999999999999888 888888 8 99999999999999998 322 334456888
Q ss_pred cCChHH-HHHHHHHhC
Q 002660 877 DCTTSD-IRSSLEQLG 891 (895)
Q Consensus 877 ~~~~dG-I~~al~~~~ 891 (895)
+...+| +.++++++-
T Consensus 134 ~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 134 IAGGRGAVREVCELLL 149 (154)
T ss_pred CCCCCcHHHHHHHHHH
Confidence 887555 999998763
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.4e-10 Score=119.24 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=60.8
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEc
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQT 874 (895)
Q Consensus 795 g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v 874 (895)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.||+|||| ||. +.+++.|+. +
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad~-----------------~ 302 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQV-----------------T 302 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCCE-----------------E
Confidence 358999999999999999999999 666667 7 9999999999999 998 555556555 8
Q ss_pred cCcCChHHHHHHHH
Q 002660 875 PEDCTTSDIRSSLE 888 (895)
Q Consensus 875 t~~~~~dGI~~al~ 888 (895)
+...+-|||.+-|-
T Consensus 303 i~~~~l~~~l~~~~ 316 (322)
T PRK11133 303 IRHADLMGVLCILS 316 (322)
T ss_pred ecCcCHHHHHHHhc
Confidence 88899999988763
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-07 Score=106.15 Aligned_cols=152 Identities=17% Similarity=0.263 Sum_probs=96.5
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCccccccchHHHHHHHHHHHHhcCCCC--------------cEEeC
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG--------------QVAYP 387 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l--ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~--------------~v~~~ 387 (895)
..++++.++++++.+.+. +++.+ .+.+..+. ..+.+.+...++.. .+.+.
T Consensus 219 ~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~~-----------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS---QPFVFLAAIVPSLSL-----------EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred HHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCCH-----------HHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence 446788999999998532 44544 33233322 33334444434431 24443
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch---hcccc----CCCeEEeCCCCHHH
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV---DIHRV----LDNGLLVDPHDQQS 460 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~---eiv~~----~~~g~lv~p~d~~~ 460 (895)
.+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+. ...++.+...+++.
T Consensus 285 ~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~ 353 (396)
T TIGR03492 285 LG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQ 353 (396)
T ss_pred ec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHH
Confidence 33 46799999999 9998874 45559999999999998743321 12222 12445555667899
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 500 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~ 500 (895)
+++++.++++|++.++++.+++++.. +....+.+++.+.+
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999988888775555555 34555555554443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.7e-10 Score=107.50 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 876 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 876 (895)
.|-..++.+++++|++++++++ +||+.| | ++|++.+|+++||+||. .++|..|+ +||.
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~-----------------~I~~ 139 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA-----------------YVTT 139 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC-----------------EEcC
Confidence 4567899999999999999999 777777 8 99999999999999999 55555554 4888
Q ss_pred cCChHHHHHHH
Q 002660 877 DCTTSDIRSSL 887 (895)
Q Consensus 877 ~~~~dGI~~al 887 (895)
+..++|+...+
T Consensus 140 ~~~~~g~v~e~ 150 (169)
T TIGR02726 140 ARGGHGAVREV 150 (169)
T ss_pred CCCCCCHHHHH
Confidence 88888764443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.5e-07 Score=101.68 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=76.2
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch----hccccCCCeEEeCC
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVLDNGLLVDP 455 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~----eiv~~~~~g~lv~p 455 (895)
+.+++.+.+++|. .+++..| |++|..+ |. .++.||+++|+|+|+....+-. ..+...+.|..++.
T Consensus 273 ~~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~ 341 (392)
T TIGR01426 273 LPPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP 341 (392)
T ss_pred CCCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc
Confidence 3468888899875 3788899 9988653 33 4789999999999997654433 23444566777754
Q ss_pred C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 456 H--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
. +.++++++|.+++.+++.++++..-..+....-..+..++.+.+++
T Consensus 342 ~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 342 EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 3 5789999999999998755555433333333445566665555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-06 Score=94.46 Aligned_cols=262 Identities=14% Similarity=0.180 Sum_probs=161.1
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||++.......-.....-+++.|+|++..---+-...+. .|..... ..+..++..|.|++-
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~rS~~---------------~y~k~~~--~~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDRSFA---------------RYAKLKF--LARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechhhhH---------------HHHHHHH--HHHHHHHhcceeeec
Confidence 77998776543222222344567799987643222111110 1111122 144568899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+.+.+++...... ++.+.-| ........ ........
T Consensus 185 se~D~~Rf~~LGa~-------------------------~v~v~GN---lKfd~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSLGAK-------------------------PVVVTGN---LKFDIEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhcCCc-------------------------ceEEecc---eeecCCCC---------------hhhHHHHH
Confidence 99888876553211 3455444 11111100 11222333
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
..+.....+ ++++++.+.. ..--+..++++..+++ ..+++.+ +|...++ ....+.+++...|+.
T Consensus 222 ~~r~~l~~~-r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~ 286 (419)
T COG1519 222 ALRRQLGGH-RPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRHPE----------RFKAVENLLKRKGLS 286 (419)
T ss_pred HHHHhcCCC-CceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCChh----------hHHHHHHHHHHcCCe
Confidence 444444333 8888888882 2223468899999974 4445544 5555442 356777888887763
Q ss_pred C-------------cEEeCCCCCCCCHHHHHHHhhcCCcEEEec-CCCCCCchHHHHHHHcCCCEEEcCC----CCchhc
Q 002660 382 G-------------QVAYPKHHKQSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKN----GGPVDI 443 (895)
Q Consensus 382 ~-------------~v~~~g~~~~~el~~ly~~A~~~~dv~v~p-s~~Eg~gl~~~Ea~a~G~PVvas~~----gg~~ei 443 (895)
- +|.+... .-||..+|+.| |++++- |+.+--|=-++|++++|+|||+-.. ..+.+-
T Consensus 287 ~~~rS~~~~~~~~tdV~l~Dt--mGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~ 360 (419)
T COG1519 287 VTRRSQGDPPFSDTDVLLGDT--MGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAER 360 (419)
T ss_pred EEeecCCCCCCCCCcEEEEec--HhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHH
Confidence 1 2222222 23899999999 887766 6666556789999999999999542 333333
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~ 487 (895)
+...+.|+.|+ |.+.+++++..++.+++.++++++++...+.
T Consensus 361 l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 361 LLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 44556778887 6888999999999999999999999998884
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.4e-07 Score=101.38 Aligned_cols=263 Identities=16% Similarity=0.128 Sum_probs=148.8
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|.++. ....+.+..++..++||+++..-+.... +. ..+ ..++. +-+.|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~--------~~-~eE-------~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE--------GA-IDE-------SIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC--------CC-chH-------HHHHH-----HHHHHhhccC
Confidence 7899999987 5677788889999999988543332110 00 000 11111 2345677888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+++...+.+.+. |.+..++.++.| ++|.-...... ..
T Consensus 151 ~t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~~-------------------~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDLL-------------------SK 188 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhcc-------------------CH
Confidence 887766655332 233336776654 55532221100 01
Q ss_pred hHHhhhhcCCCCCcEE-EEEeCCC--CC---CCHHHHHHHHHhcccccCCCcEEEEEecC-CCccccccchHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVI-LALARPD--PK---KNITTLVKAFGECRPLRELANLTLIMGNR-DGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~i-l~vgrl~--~~---Kgi~~ll~A~~~l~~~~~~~~l~livG~~-~~~~~~~~~~~~~~~~l~~ 373 (895)
.....+++.+++++++ +.+-+-. .. +.+..+++++..+ .. ++.++...+ +.. ..+...+..
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~--~~~vi~P~~~p~~-------~~i~~~i~~ 256 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NK--NYIFTYPNADAGS-------RIINEAIEE 256 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---cc--CCEEEEeCCCCCc-------hHHHHHHHH
Confidence 1223344444343443 4444322 22 3355555555544 21 233343222 211 122333433
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
.... .+++.+.+.++..++..+++.| +++|-- +-|.. .||.+.|+|+|+- |.-+|.+..+.+.+++
T Consensus 257 ~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 257 YVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV 322 (365)
T ss_pred HhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe
Confidence 3211 4689999999999999999999 887732 22333 8999999999954 4566777677787878
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
+.|++++.+++.+++ +++.++.+ ... ..|-..+-++++.+.
T Consensus 323 -g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 -DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred -CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 568999999999954 44332322 222 346555556665543
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.9e-07 Score=101.35 Aligned_cols=119 Identities=18% Similarity=0.246 Sum_probs=79.0
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.+++++|..+.. .++++++.+. ...+. ++|.... . .-.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~--~-------------------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA--D-------------------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc--c-------------------ccCCCEEEeecC
Confidence 346689999988766 6677777663 34453 4465421 0 004678887763
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh------ccccCCCeEEeCCC--CHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPH--DQQSVA 462 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e------iv~~~~~g~lv~p~--d~~~la 462 (895)
..++.+++..| |++|..+ --.++.|++++|+|+|+-...+..| .++..+.|..+++. +++.++
T Consensus 241 -~~~~~~~m~~a----d~vIs~~----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 26899999999 9988652 2245999999999999977654333 23344556665543 568888
Q ss_pred HHHHHH
Q 002660 463 DALLKL 468 (895)
Q Consensus 463 ~ai~~l 468 (895)
++|.++
T Consensus 312 ~~l~~~ 317 (318)
T PF13528_consen 312 EFLERL 317 (318)
T ss_pred HHHhcC
Confidence 887653
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.5e-09 Score=104.62 Aligned_cols=70 Identities=9% Similarity=-0.023 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCc
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPED 877 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~ 877 (895)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|++++|+++. ...+.. ++|++..
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~--~~~~~~-----------------a~~v~~~ 154 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLLLPR-----------------ADYVTRI 154 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh--HHHHHh-----------------CCEEecC
Confidence 568899999999999999988 777777 8 99999999999998776 322333 3458877
Q ss_pred CChHHHHHHHHH
Q 002660 878 CTTSDIRSSLEQ 889 (895)
Q Consensus 878 ~~~dGI~~al~~ 889 (895)
...+|....|.+
T Consensus 155 ~~g~g~~~el~~ 166 (183)
T PRK09484 155 AGGRGAVREVCD 166 (183)
T ss_pred CCCCCHHHHHHH
Confidence 777777666543
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=106.84 Aligned_cols=210 Identities=16% Similarity=0.074 Sum_probs=101.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCC-----
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS----- 79 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~----- 79 (895)
||+|+|.-. +.=.-+||...++..|+++|+++| |+|.|+++.+..-.....-......+.-...
T Consensus 1 kIl~vt~E~---------~P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEY---------APFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-B---------TTTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEccc---------CcccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 788998444 311489999999999999999999 9999999876321000000000000000000
Q ss_pred ---CcccccCCCCCCeEEEecCCCCCCcccccccCCC-----ChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEec
Q 002660 80 ---DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWP-----HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGH 151 (895)
Q Consensus 80 ---~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~-----~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h 151 (895)
....-.....+|++++.+... .+..+..+.. +.+... ++..+-+.....+.+ + +++|||||||
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~-rf~~fs~a~le~~~~-l----~~~pDIIH~h 140 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAE-RFAFFSRAALELLKK-L----GWKPDIIHCH 140 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHH-HHHHHHHHHHHHHCT-C----T-S-SEEEEE
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHH-HHHHHHHHHHHHHHh-h----CCCCCEEEec
Confidence 000000001146666665432 1222222211 111111 111111111111111 1 2579999999
Q ss_pred cccchhHHHHHhccC-------CCCEEEEeCCCchhhHHH--HHHHhhccHHH--HHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 152 YADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLEQ--LLKQARLSRDE--INATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 152 ~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.|.+++++.++.... ++|+|+|+|++..+.... .+..-.++... ....+.+...+..++..+..||.|+
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~ 220 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVT 220 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEE
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEee
Confidence 999999999888765 599999999975432100 00000000000 0000111223334567899999999
Q ss_pred eCChHHHHHHHhhh
Q 002660 221 TSTRQEIEEQWRLY 234 (895)
Q Consensus 221 ~~s~~~~~~~~~~~ 234 (895)
++|+..++++...+
T Consensus 221 TVS~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 221 TVSPTYAREIQTPE 234 (245)
T ss_dssp ESSHHHHHHTTSHH
T ss_pred eCCHHHHHHHhCcc
Confidence 99999888875543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.1e-06 Score=94.59 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=59.5
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh------ccccCCCeEEeC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVD 454 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e------iv~~~~~g~lv~ 454 (895)
.+++.+.++.+ +++.++|..| |++|.-+ -..++.|++++|+|+|.....+..| .+...+.|+.++
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~a----d~vI~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~ 298 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNA----ELVITHG----GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhC----CEEEECC----ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcC
Confidence 46788888755 6899999999 9998764 2347999999999999988755333 344556788887
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 002660 455 PHDQQSVADALLKLVADK 472 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~ 472 (895)
..+. ++.+++...++++
T Consensus 299 ~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 299 YKEL-RLLEAILDIRNMK 315 (321)
T ss_pred hhhH-HHHHHHHhccccc
Confidence 7666 5555555555543
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.6e-07 Score=87.23 Aligned_cols=128 Identities=20% Similarity=0.226 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccC
Q 002660 32 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELL 111 (895)
Q Consensus 32 ~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~ 111 (895)
+.++.+++++|.++| ++|+++|.....+.. ...+++.+++++.+.. . .
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~~-----------------------~~~~~i~~~~~~~~~k--~-----~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEKY-----------------------EIIEGIKVIRLPSPRK--S-----P 57 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchhh-----------------------hHhCCeEEEEecCCCC--c-----c
Confidence 458999999999999 999999984321110 0124888888864321 1 2
Q ss_pred CCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc-hhHHHHHhccCC-CCEEEEeCCCchhhHHHHHHHh
Q 002660 112 WPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA-GDSAALLSGALN-VPMLFTGHSLGRDKLEQLLKQA 189 (895)
Q Consensus 112 ~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~-~~~~~~~~~~~~-ip~v~t~H~~~~~~~~~~~~~~ 189 (895)
++++. + ..+...+ .+ .+|||||+|...+ ++++..+++..+ +|+|++.|+...... .
T Consensus 58 ~~~~~-~-~~l~k~i-------k~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~ 115 (139)
T PF13477_consen 58 LNYIK-Y-FRLRKII-------KK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------S 115 (139)
T ss_pred HHHHH-H-HHHHHHh-------cc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------C
Confidence 22221 1 1222222 22 7899999999864 777888888888 999999998643110 0
Q ss_pred hccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
.. .++.+. .++.+++.+|.|++.|
T Consensus 116 --~~------~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 --KK------KKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --ch------HHHHHH--HHHHHHHhCCEEEEcC
Confidence 00 001122 2556899999999865
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.3e-06 Score=88.32 Aligned_cols=364 Identities=15% Similarity=0.130 Sum_probs=207.4
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
|.||||+.|. |..+| ..-+.-+.+++.+.+++....++|.+..+.+....|
T Consensus 1 m~~~Kv~~I~------GTRPE----------~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~------------- 51 (383)
T COG0381 1 MKMLKVLTIF------GTRPE----------AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQV------------- 51 (383)
T ss_pred CCceEEEEEE------ecCHH----------HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHH-------------
Confidence 7889999887 22322 234556888999998777777788775432211110
Q ss_pred cccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSA 159 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~ 159 (895)
.++..++. |. ..+..-.--.-+.......+..+..+. .+ .+||+|..|.= .+.+++
T Consensus 52 -----------le~~~i~~-pd-y~L~i~~~~~tl~~~t~~~i~~~~~vl---~~-------~kPD~VlVhGDT~t~lA~ 108 (383)
T COG0381 52 -----------LELFGIRK-PD-YDLNIMKPGQTLGEITGNIIEGLSKVL---EE-------EKPDLVLVHGDTNTTLAG 108 (383)
T ss_pred -----------HHHhCCCC-CC-cchhccccCCCHHHHHHHHHHHHHHHH---Hh-------hCCCEEEEeCCcchHHHH
Confidence 11111111 11 111111001123334444444443322 22 78999998864 566666
Q ss_pred HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 160 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 160 ~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+.++...+||+.+.--++-.... .++.. +-|+ .+-.-|+.-+++|....+.+.+.
T Consensus 109 alaa~~~~IpV~HvEAGlRt~~~-------~~PEE-------~NR~-----l~~~~S~~hfapte~ar~nLl~E------ 163 (383)
T COG0381 109 ALAAFYLKIPVGHVEAGLRTGDL-------YFPEE-------INRR-----LTSHLSDLHFAPTEIARKNLLRE------ 163 (383)
T ss_pred HHHHHHhCCceEEEecccccCCC-------CCcHH-------HHHH-----HHHHhhhhhcCChHHHHHHHHHc------
Confidence 88888899999876665421000 00110 1111 13456778888888777766442
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCC-cEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK-PVIL 317 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il 317 (895)
|.+..+|.++.|.+ |.-........ ... .....+....++ .+++
T Consensus 164 -----------------G~~~~~IfvtGnt~iDal~~~~~~~~--------------~~~---~~~~~~~~~~~~~~iLv 209 (383)
T COG0381 164 -----------------GVPEKRIFVTGNTVIDALLNTRDRVL--------------EDS---KILAKGLDDKDKKYILV 209 (383)
T ss_pred -----------------CCCccceEEeCChHHHHHHHHHhhhc--------------cch---hhHHhhhccccCcEEEE
Confidence 44445788888764 21111100000 000 001111223343 4455
Q ss_pred EEeCCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 002660 318 ALARPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVP 396 (895)
Q Consensus 318 ~vgrl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~ 396 (895)
..-|-... +++..+++|+.++.++. +++.+|....+. ..+.++. ...++-.++|.+...+...+..
T Consensus 210 T~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~---------~~v~e~~--~~~L~~~~~v~li~pl~~~~f~ 276 (383)
T COG0381 210 TAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR---------PRVRELV--LKRLKNVERVKLIDPLGYLDFH 276 (383)
T ss_pred EcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC---------hhhhHHH--HHHhCCCCcEEEeCCcchHHHH
Confidence 55554433 88999999999887644 455556555443 0122222 3566666789999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHH
Q 002660 397 EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 475 (895)
Q Consensus 397 ~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~ 475 (895)
.|...| .++++ ..|-..-||-..|+||++-..+ .-+|.++ .+.-.++. .+.+.+.+++..++++++..
T Consensus 277 ~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~-agt~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 277 NLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVE-AGTNILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred HHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCcccee-cCceEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 999999 55655 2456678999999999986543 3345443 34446665 47899999999999999988
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 476 ARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 476 ~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++|++..- .|.-...++++.+++.
T Consensus 346 ~~m~~~~n----pYgdg~as~rIv~~l~ 369 (383)
T COG0381 346 ERMSNAKN----PYGDGNASERIVEILL 369 (383)
T ss_pred HHHhcccC----CCcCcchHHHHHHHHH
Confidence 87765443 3433334444444443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.2e-07 Score=90.20 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=55.7
Q ss_pred EEEEEecCCCC--------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHH---HHHHh-----CCCCC
Q 002660 614 IFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVS-----GHLSP 671 (895)
Q Consensus 614 li~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~---~~l~~-----l~l~~ 671 (895)
+|++||||||+ ...++.+.+++++++++ |+.|+++|||+...+. +++.+ .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 58999999993 35688999999999998 5999999999999884 78887 3352
Q ss_pred CCCCEEEEcCCceEee
Q 002660 672 SDFDAFICNSGSDLYY 687 (895)
Q Consensus 672 ~~~d~~I~~nGa~I~~ 687 (895)
.++++++||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 35899999999864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.2e-06 Score=81.95 Aligned_cols=199 Identities=14% Similarity=0.129 Sum_probs=111.6
Q ss_pred cCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
.+-|+.||+||||+ ..+++...+.++.|++. +.+.++-|-.++-+.+-+..--+ ..+||.-+.||-.-|.
T Consensus 10 ~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-----v~ig~VggsDl~k~~eqlG~~Vl--~~fDY~F~ENGl~~yk 82 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-----VTIGFVGGSDLSKQQEQLGDNVL--EEFDYVFSENGLVAYK 82 (252)
T ss_pred CceEEEEecCCccccccccCCHHHHHHHHHHhhh-----eEEEEeecHHHHHHHHHhchhHH--hhhcccccCCCeeEee
Confidence 34589999999995 56788888999998886 88999999777666554422112 3579999999998887
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCC-------
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM------- 760 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~------- 760 (895)
.+ +....+....++......+.+.-.+..+.......+ ...+.+.- .....++=.-++...
T Consensus 83 ~g------k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiK----RGtFiEFR--NgMiNvsPIGR~cs~EER~eF~ 150 (252)
T KOG3189|consen 83 GG------KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIK----RGTFIEFR--NGMINVSPIGRNCSQEERNEFE 150 (252)
T ss_pred CC------cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc----ccceEEec--CCceeccccccccCHHHHHHHH
Confidence 65 333333334444332111222222222222211111 01111100 001111111011000
Q ss_pred ----C-ccHHHHHHHHHhccCeEEEEEecCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 761 ----T-PPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 761 ----~-~~~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
. ..-+++-+.|++......+++|-++ -.+||.|+|..|-.-|++|-+. |.+ .|-|+|| .+| | .|
T Consensus 151 e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GGN-D-yE 224 (252)
T KOG3189|consen 151 ELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGGN-D-YE 224 (252)
T ss_pred HhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCCC-c-ce
Confidence 0 0011223334444344555666553 3699999999999999998776 666 7777888 457 7 88
Q ss_pred cccC
Q 002660 831 LLGG 834 (895)
Q Consensus 831 Ml~~ 834 (895)
.|.-
T Consensus 225 If~d 228 (252)
T KOG3189|consen 225 IFAD 228 (252)
T ss_pred eeeC
Confidence 8754
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.4e-07 Score=90.97 Aligned_cols=52 Identities=23% Similarity=0.301 Sum_probs=44.6
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
.+-.+-.+-+|..+++.+++.+|+++++++| .||+.| | ++||+.||.+||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444445568999999999999999999999 777777 7 99999999999995
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.8e-05 Score=83.50 Aligned_cols=98 Identities=22% Similarity=0.304 Sum_probs=74.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 002660 313 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 392 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 392 (895)
+.++++.|..++.+....+++++..+ ....++.+|+|.+... .+++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC--H
Confidence 56899999999877677888888765 3445676788876321 23455555442 47888888 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 437 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~ 437 (895)
+++.++++.| |++|.+ .|.++.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999875 56899999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.4e-05 Score=80.46 Aligned_cols=192 Identities=15% Similarity=0.110 Sum_probs=137.0
Q ss_pred CEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 002660 262 RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL 341 (895)
Q Consensus 262 ~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~ 341 (895)
++..+|.++|.+.|.+..++. .-.--+.++|...+. +.+..+++.-.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da----------------------------~~~~dL~~ign~~pD-----r~e~~ke~~~~ 208 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA----------------------------SYDVDLNLIGNPYPD-----RVEEIKEFFVE 208 (373)
T ss_pred ceeccCccCCchhcccCCccc----------------------------cceeeeEEecCCCcc-----HHHHHHHHhhc
Confidence 788999999999998765332 112247777776554 44555444311
Q ss_pred c--CCCc-EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCC--
Q 002660 342 R--ELAN-LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDVPEIYRLAAKTKGVFINPAF-- 414 (895)
Q Consensus 342 ~--~~~~-l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~-~el~~ly~~A~~~~dv~v~ps~-- 414 (895)
. +... ..+ +.|.+-. ..+-...|.+++.+.|+++. ..++..++.- +++++-+.
T Consensus 209 ps~kl~v~rr~~~~g~~y~----------------~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~ 268 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRYP----------------DDIWGRTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRAS 268 (373)
T ss_pred cchhhhccceeeecCCccc----------------hhhhcccccchhhhhhccCccchhhhccccc----ceeeeecHHH
Confidence 1 1111 112 3344310 11222235567777788777 7888999988 88887754
Q ss_pred -CCC---CchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcC
Q 002660 415 -IEP---FGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLF 489 (895)
Q Consensus 415 -~Eg---~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~ 489 (895)
.++ +++-+.|+++||.|.+++..-+..-++..+..-++. .|..++.+.+..++..+++++++.+.+.+.+ ..|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~h 346 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARH 346 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhc
Confidence 222 378899999999999999998888888777665555 4899999999999999999999999999999 589
Q ss_pred CHHHHHHHHHHHHHcccCC
Q 002660 490 SWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 490 s~~~~a~~~~~~~~~~~~~ 508 (895)
+.++-+..+++.+..+..+
T Consensus 347 t~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 347 TYEERIFKLLNEIASINIR 365 (373)
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 9999999999988876544
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=83.20 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=45.4
Q ss_pred EEEEEecCCCC--c---------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 614 IFVISVDCDST--T---------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 614 li~~DiDGTL~--~---------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+++||+||||. . .+.+.+.+.++.|+++ |+.++|+|||....+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 47999999993 2 5567899999999997 599999999999999999999886
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.9e-07 Score=82.57 Aligned_cols=55 Identities=15% Similarity=0.136 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 856 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~ 856 (895)
+|-.+.+.|+++++++++++.. +||+-+ | +++|+.+|+++|+.+|. .+.+.++++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh--~~v~~~a~~ 137 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH--PLLKQRADY 137 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC--HHHHHhhHh
Confidence 4777888999999999999877 666666 7 99999999999999999 555555544
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00015 Score=79.05 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=49.8
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC---CchhccccCCCeEEeCCCCHHHHHHHHHHHHh
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 470 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g---g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~ 470 (895)
+...++.-| |++| -+-|....||...|+|.|++..| +..+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 555889999 8987 34678889999999999997654 3333433 35889988899999887766554
|
They are found in archaea and some bacteria and have no known function. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.9e-06 Score=86.66 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=58.0
Q ss_pred eEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcC---CCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 613 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTS---MTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 613 kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG---R~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
|+++||+|||| .....+.+.+++++|+++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.+
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 58999999999 233445789999999998 599999995 99999999999999863 457799999887544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00035 Score=81.33 Aligned_cols=154 Identities=13% Similarity=0.084 Sum_probs=97.8
Q ss_pred CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 313 KPVILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 313 ~~~il~vgrl~~-----~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
..++++.|.... .+-+..+++|++.+. .++ ++-.+++.. . .++.++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~------------------~-~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVE------------------A-INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcC------------------c-ccCCCceEEe
Confidence 467888888643 233567778877663 133 232222110 0 2356789999
Q ss_pred CCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCCC--CHH
Q 002660 388 KHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQ 459 (895)
Q Consensus 388 g~~~~~el~~ly~--~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p~--d~~ 459 (895)
+++|+. +++. .+ ++||.= |-..++.||+.+|+|+|+-...+ ....++..+.|+.++.. +.+
T Consensus 352 ~w~Pq~---~lL~hp~v----~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 352 KWFPQR---AVLKHKNV----KAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred cCCCHH---HHhcCCCC----CEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 999875 4563 35 777743 55678999999999999977543 23334455678877653 578
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 460 SVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 460 ~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
++.++|.+++++|+-++...+-+.... +..+...-|-.+.+.+
T Consensus 421 ~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 421 QLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999999999999876665555444444 2444555555555444
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.2e-06 Score=75.99 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCc---c------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHH---------------HHHHHHhCC
Q 002660 613 HIFVISVDCDSTT---G------LLDATKKICEAVEKERTEGSIGFILSTSMTISE---------------IHSFLVSGH 668 (895)
Q Consensus 613 kli~~DiDGTL~~---~------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~---------------~~~~l~~l~ 668 (895)
|+|++|+||||.. . +.+.+.+++++++++ |+.|+++|||+... +..||.+.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 6899999999931 1 345677777777776 69999999998764 467888989
Q ss_pred CCCCCCCEEE
Q 002660 669 LSPSDFDAFI 678 (895)
Q Consensus 669 l~~~~~d~~I 678 (895)
++ +|-++
T Consensus 78 ip---Yd~l~ 84 (126)
T TIGR01689 78 VP---YDEIY 84 (126)
T ss_pred CC---CceEE
Confidence 85 45444
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0013 Score=69.52 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=173.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
+|||+|.|.|-+ |. |.-+....+|++|.+. | .+|.+++....-+...
T Consensus 9 ~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~---------------- 57 (400)
T COG4671 9 RPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP---------------- 57 (400)
T ss_pred cceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC----------------
Confidence 469999996653 44 8899999999999998 8 9999999864322221
Q ss_pred cccccCCCCCCeEEEecCCCCC--CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPK--DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 158 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~--~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~ 158 (895)
...|++.+.+|+-.. +..+....+-..+.++...-...+...+ +..+||++.......|..
T Consensus 58 -------~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~~~Rs~lil~t~----------~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 -------GPAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETKKLRSQLILSTA----------ETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred -------CcccCceEecCceEecCCCceeeeecCCCHHHHHHHHHHHHHHHH----------HhcCCCEEEEeccccchh
Confidence 124899999997221 0112222222224343322111121111 128899999987644422
Q ss_pred HHH---H--hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhh
Q 002660 159 AAL---L--SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 233 (895)
Q Consensus 159 ~~~---~--~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~ 233 (895)
.-. + -+..+.+.|.-+.+.-..- . ...+-.++-..++.+-++.|.|.+...-...+....
T Consensus 121 ~EL~ptL~yl~~~~t~~vL~lr~i~D~p-~--------------~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~ 185 (400)
T COG4671 121 FELLPTLEYLKTTGTRLVLGLRSIRDIP-Q--------------ELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLTE 185 (400)
T ss_pred hhhhHHHHHHhhcCCcceeehHhhhhch-h--------------hhccchhhhHHHHHHHHhheEEEEecCccccChhhc
Confidence 111 1 1122344444444431110 0 000011222234556778999999765444333333
Q ss_pred hcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCC
Q 002660 234 YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK 313 (895)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (895)
|+- .+.+ +-.+.+.|.= .+--+.... +. ...++..
T Consensus 186 ~~~-~~~i--------------------~~k~~ytG~v-q~~~~~~~~----------------p~-------~~~pE~~ 220 (400)
T COG4671 186 FPF-APAI--------------------RAKMRYTGFV-QRSLPHLPL----------------PP-------HEAPEGF 220 (400)
T ss_pred CCc-cHhh--------------------hhheeEeEEe-eccCcCCCC----------------CC-------cCCCccc
Confidence 332 1111 2234444432 110010000 00 0002446
Q ss_pred cEEEEEeCC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 002660 314 PVILALARP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 392 (895)
Q Consensus 314 ~~il~vgrl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 392 (895)
.+++++|.- +...=+...+.|+..+..+++ +..+|.|.- |. + ...+++.....-.++|.+..+ .
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~-----MP---~---~~r~~l~~~A~~~p~i~I~~f--~ 285 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPF-----MP---E---AQRQKLLASAPKRPHISIFEF--R 285 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCC-----CC---H---HHHHHHHHhcccCCCeEEEEh--h
Confidence 677777753 222334455555555543222 354455542 22 2 223333344444567888888 7
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh--ccc-----cCCCeEEeCCC--CHHHHHH
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHR-----VLDNGLLVDPH--DQQSVAD 463 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e--iv~-----~~~~g~lv~p~--d~~~la~ 463 (895)
.++..|+..| +..|.- -|+ ++..|-+++|+|-+.-..+...| ++. ..+-.-+..|+ .++.+|+
T Consensus 286 ~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~ 357 (400)
T COG4671 286 NDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLAD 357 (400)
T ss_pred hhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHH
Confidence 8999999999 887743 234 46679999999988766544433 111 11111122333 3667777
Q ss_pred HHHHHHhC
Q 002660 464 ALLKLVAD 471 (895)
Q Consensus 464 ai~~ll~~ 471 (895)
+|..+++.
T Consensus 358 al~~~l~~ 365 (400)
T COG4671 358 ALKAALAR 365 (400)
T ss_pred HHHhcccC
Confidence 77777763
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00039 Score=78.68 Aligned_cols=114 Identities=15% Similarity=0.095 Sum_probs=79.7
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEe
Q 002660 378 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLV 453 (895)
Q Consensus 378 ~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv 453 (895)
.++..++...+++|+. +++..| |++|.. |-..+..||+.+|+|+|+-..+. ..+.++.-+.|...
T Consensus 280 ~~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 280 VNVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred ccCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 3566788888888765 589999 999976 45567899999999999976653 23445556778777
Q ss_pred C--CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 454 D--PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 454 ~--p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
. ..+.+.++++|.++|+++..++... ..++.. +.-.....++.+.+..+
T Consensus 349 ~~~~l~~~~l~~av~~vL~~~~~~~~~~-~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 349 PFEELTEERLRAAVNEVLADDSYRRAAE-RLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred CcccCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHhhhcccHHHHHHHHHHHHh
Confidence 6 6889999999999999987555443 344444 34443444444444343
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0048 Score=71.28 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=57.5
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVD 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~ 454 (895)
+++.+.++.|+.+ ++..+ ++ ||.- +-..+++||+++|+|+|+-...+- ...+.+ -+.|+-+.
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~----~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~ 391 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHS----SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVK 391 (459)
T ss_pred CCEEEeccCCHHH---HhccC----ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEe
Confidence 3567778888765 55555 44 4422 344688999999999999775442 222332 24566553
Q ss_pred -------CCCHHHHHHHHHHHHhCH-HHHHHHHHHHH
Q 002660 455 -------PHDQQSVADALLKLVADK-QLWARCRQNGL 483 (895)
Q Consensus 455 -------p~d~~~la~ai~~ll~~~-~~~~~~~~~~~ 483 (895)
..+.++++++++++++++ ++.+.+++++.
T Consensus 392 ~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 392 REVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAK 428 (459)
T ss_pred cccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 236789999999999864 33334444433
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=84.09 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=57.5
Q ss_pred ccCeEEEEEecCCC-C--cch---hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCc
Q 002660 610 RRKHIFVISVDCDS-T--TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 683 (895)
Q Consensus 610 ~~~kli~~DiDGTL-~--~~~---~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 683 (895)
...|+|+||+|||| + ..+ .+.+.++|++|+++ |+.++|+|+++...+...++.+|+. ..+| .|+++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFd-vIIs~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFD-IIISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccC-EEEECCc
Confidence 35789999999999 2 222 58999999999998 5999999999999999999999995 2334 4555777
Q ss_pred eEee
Q 002660 684 DLYY 687 (895)
Q Consensus 684 ~I~~ 687 (895)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 6554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.4e-05 Score=83.70 Aligned_cols=108 Identities=21% Similarity=0.287 Sum_probs=73.2
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch----hccccC-CCeEEe-C------CCCHHHH
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVL-DNGLLV-D------PHDQQSV 461 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~----eiv~~~-~~g~lv-~------p~d~~~l 461 (895)
|..++.+.| .+.|+||.+||+|.+..|.-.+|+|-|+|+..|.. |.|++. .-|+.+ + .++.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 778888999 99999999999999999999999999999987654 444332 235443 3 2345667
Q ss_pred HHHHHHHHhCHHHHHHHHHHHH-HHh-hcCCHHHHHHHHHHHHHccc
Q 002660 462 ADALLKLVADKQLWARCRQNGL-KNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 462 a~ai~~ll~~~~~~~~~~~~~~-~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
++-|.+.... ..+++..++.+ ++. .-.+|..+..-|.+.=.-.+
T Consensus 569 ~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 569 ASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 7766665542 23344333222 333 36899988887776544333
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00015 Score=80.25 Aligned_cols=272 Identities=14% Similarity=0.146 Sum_probs=137.5
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|..+. ....+.++..+..++||++ ++|.--+.. -...|. ..+ ..|. .+-+.|+.-++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~---d~~~g~-~de-------~~R~-----~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG---DRTEGM-PDE-------INRH-----AIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S----TTSST-THH-------HHHH-----HHHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc---ccCCCC-chh-------hhhh-----hhhhhhhhhcc
Confidence 6899999886 3567777888889999954 455421100 000011 111 1122 24567999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~G-id~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+++...+.+.+. |.+..+|.++-+. +|.-....... ...
T Consensus 129 ~t~~~~~~L~~~-----------------------G~~~~rI~~vG~~~~D~l~~~~~~~-----------------~~~ 168 (346)
T PF02350_consen 129 PTEEARERLLQE-----------------------GEPPERIFVVGNPGIDALLQNKEEI-----------------EEK 168 (346)
T ss_dssp SSHHHHHHHHHT-----------------------T--GGGEEE---HHHHHHHHHHHTT-----------------CC-
T ss_pred CCHHHHHHHHhc-----------------------CCCCCeEEEEChHHHHHHHHhHHHH-----------------hhh
Confidence 999888877553 3333488887763 33221111000 000
Q ss_pred hHHhhhhcCCCCCcE-EEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPV-ILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~-il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
.. ...+.....+++ ++..-|... ......+.++++.+.+. +...+.+.+.+.| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 011111134444 444444332 23456777777777543 2233323333222 23355555555
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHH-HHHHcCCCEEEcCC-CCchhccccCCCeEEeC
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~-Ea~a~G~PVvas~~-gg~~eiv~~~~~g~lv~ 454 (895)
++ +++.+...++..++..+++.| +++|-= .| .+. ||..+|+|+|.-.. |--.+.+..+. ..++.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~-nvlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGS-NVLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTS-EEEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc-eEEeC
Confidence 55 389999999999999999999 887632 44 566 99999999999854 44455555444 44565
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
.|.+++.++|.+++.+++.+..+.. ....|--...++++.+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999988554443221 112454455555655554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.2e-05 Score=84.12 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=118.4
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
.....+..++++.+..++++..++ .|=-+..++++.++.+.- |+-+|++...+.. -...+.+.+.+.
T Consensus 271 ~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v--P~S~L~L~~~~~~---------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 271 IVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV--PNSRLWLLRFPAS---------GEARLRRRFAAH 337 (468)
T ss_dssp EEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS--TTEEEEEEETSTT---------HHHHHHHHHHHT
T ss_pred ccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC--CCcEEEEeeCCHH---------HHHHHHHHHHHc
Confidence 335667788888888777777775 576788888888886434 4444443333211 125677788888
Q ss_pred CCCC-cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh-----cccc-CCCeE
Q 002660 379 DLYG-QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRV-LDNGL 451 (895)
Q Consensus 379 ~l~~-~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e-----iv~~-~~~g~ 451 (895)
|+.. ++.|.+..+.++....|+.+ ||++=|. .-+-+.+.+||+.+|+|||+-.-..... ++.. |-..+
T Consensus 338 Gv~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~-p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 338 GVDPDRIIFSPVAPREEHLRRYQLA----DICLDTF-PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp TS-GGGEEEEE---HHHHHHHGGG-----SEEE--S-SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CCChhhEEEcCCCCHHHHHHHhhhC----CEEeeCC-CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 8874 69998888888888888889 9999773 3345689999999999999854222221 2221 11233
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcc
Q 002660 452 LVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~ 505 (895)
+.. |.++..+.-.++.+|++.++++++..++.. + -|+-..+++.+.+.|+.+
T Consensus 413 IA~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 413 IAD--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp B-S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred cCC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 443 789999999999999999999999998877 3 699999999999998753
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00025 Score=74.55 Aligned_cols=64 Identities=6% Similarity=0.092 Sum_probs=48.9
Q ss_pred eEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHH---HHhCCCCCCCCCEEEEcC
Q 002660 613 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSF---LVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 613 kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~---l~~l~l~~~~~d~~I~~n 681 (895)
|+++||+|||| ...+.+.+.+++++|+++ |+.|+++|+|+.....++ +..+|++. .++-++++.
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 68999999999 356778889999999998 599999999988665544 55567753 345566553
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.80 E-value=4e-05 Score=76.38 Aligned_cols=185 Identities=13% Similarity=0.103 Sum_probs=92.3
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhHHHhhcc
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYR 710 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~ 710 (895)
.++|++|++. +.|+|+||-.+.-+.+-+. .--+ ..+|++-+.||...|..+ .......+..++...
T Consensus 2 ~~~L~~L~~~-----~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~------~~~~~~~~~~~lgee 68 (220)
T PF03332_consen 2 AELLQKLRKK-----VPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG------ELIWSQSIAEFLGEE 68 (220)
T ss_dssp HHHHHHHHTT-----SEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT------EEEEE--HHHHHHHH
T ss_pred HHHHHHHHhc-----CeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC------CchhhHhHHHHcCHH
Confidence 4677788875 9999999999988877663 2112 236899999999998765 222222233333321
Q ss_pred cCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEE--eeCCCCC------------ccHHHHHHHHHhccC
Q 002660 711 WGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS--VQKPGMT------------PPVKELRKVLRIQAL 776 (895)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~------------~~~~~l~~~l~~~~~ 776 (895)
-..+.+..++..........+ ...+.|.- .-.+.+. -+..... ...+.+.+.|.....
T Consensus 69 ~~~~~in~~l~~~~~l~lp~k----rGtfIE~R----~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~ 140 (220)
T PF03332_consen 69 KLQKLINFCLRYISDLDLPVK----RGTFIEFR----GGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFP 140 (220)
T ss_dssp HHHHHHHHHHHHHHT---S-------S-SEEEE----SSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCCcc----CCCceeec----CCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCC
Confidence 111112222211112111111 11111111 0111111 0100000 001233444554444
Q ss_pred eEEEEEe-cCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccccccCcc-eEEEecC
Q 002660 777 RCHVIYC-QNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEGLLGGVH-KTVILKG 843 (895)
Q Consensus 777 ~~~~~~s-~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~eMl~~ag-~gVaMgN 843 (895)
.+.+.++ .+...+||.|+|.+|..+|++|.+.. .+ -|.|+|| .+| | .|.+...+ .|+.+.|
T Consensus 141 d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~ 207 (220)
T PF03332_consen 141 DFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTS 207 (220)
T ss_dssp CCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SS
T ss_pred CCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCC
Confidence 4333333 33348999999999999999997743 33 5666777 467 7 89987654 4777654
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.6e-05 Score=78.52 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=57.4
Q ss_pred cccCeEEEEEecCCCC---cch---hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 609 RRRKHIFVISVDCDST---TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~---~~~---~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
....|+|+||+||||. ..+ .+.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..+|. |.++|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDv-II~~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDI-IICGG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccE-EEECC
Confidence 3467899999999992 333 57899999999998 5999999988888889999999995 23444 55566
Q ss_pred ceEeec
Q 002660 683 SDLYYS 688 (895)
Q Consensus 683 a~I~~~ 688 (895)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 665543
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.046 Score=62.54 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=67.3
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC--
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p-- 455 (895)
++.+.++.|+.+ +++.. +..+|| + -+--++++||+++|+|+|+-..-+ ...++ ...+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~Fv-t---HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFV-N---HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEE-c---cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 566778988765 55555 112344 2 133368899999999999976533 22222 22456777753
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHH
Q 002660 456 ---HDQQSVADALLKLVADK-QLWARCRQNGLKNI----HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ---~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~----~~~s~~~~a~~~~~~~~ 503 (895)
-+.++++++|.++++++ +..+++++++++.- +.=|.....++|++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l~ 438 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQ 438 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 36789999999999765 34445555444332 22344444555555544
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.022 Score=66.17 Aligned_cols=169 Identities=12% Similarity=0.142 Sum_probs=89.0
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
...+.++.|.... .+.+..+.++++.+. .++.++++......... ..+-+...+... ..++.+.++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc----cCCEEEecC
Confidence 4567888888643 344555556655542 24544566421110000 000011111111 346888899
Q ss_pred CCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhc----cc-cCCCeEEe--------C
Q 002660 390 HKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI----HR-VLDNGLLV--------D 454 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~ei----v~-~~~~g~lv--------~ 454 (895)
+|+. .++..+ ++ ||.= -| -.+++||+++|+|+|+....+-+-. +. .-..|+-+ +
T Consensus 353 ~PQ~---~iL~h~----~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~ 421 (482)
T PLN03007 353 APQV---LILDHQ----ATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVK 421 (482)
T ss_pred CCHH---HHhccC----ccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccc
Confidence 8875 566666 44 4422 23 4588999999999999765432221 11 11233332 1
Q ss_pred --CCCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHhh--cCCHHHHHHHHHHHHHc
Q 002660 455 --PHDQQSVADALLKLVADKQ------LWARCRQNGLKNIH--LFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 455 --p~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~~--~~s~~~~a~~~~~~~~~ 504 (895)
.-+.+++++++++++.+++ ..+++++.+++.+. -.|+.. .++|++.+.+
T Consensus 422 ~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~-l~~~v~~~~~ 480 (482)
T PLN03007 422 GDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFND-LNKFMEELNS 480 (482)
T ss_pred cCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHH-HHHHHHHHHh
Confidence 1367899999999998752 22334444444442 244444 3555555543
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.032 Score=64.09 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~---~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..++++.|... ..+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 346788888853 4455677777777663 1 33234432210 0111 0 11111 135677778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeCCCCHHHHHH
Q 002660 389 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDPHDQQSVAD 463 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~p~d~~~la~ 463 (895)
++|+.+ ++...+ ..+||. -+--.+.+||+.+|+|+|+....+- ...+.+ .+.|+-+...+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 988764 555540 024442 2335788999999999999765332 223322 35566665568899999
Q ss_pred HHHHHHhCHHHHHH
Q 002660 464 ALLKLVADKQLWAR 477 (895)
Q Consensus 464 ai~~ll~~~~~~~~ 477 (895)
+|++++++++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988654443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.06 Score=61.98 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=71.9
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCC----
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDP---- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p---- 455 (895)
+.+.+++|+.+ ++...+ ...||.- +--++++||+++|+|+|+....+ ....+...+.|+.++.
T Consensus 341 ~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 66678988764 555540 1235422 34468999999999999976533 2233444567877753
Q ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---h-hcCCHHHHHHHHHHHHHccc
Q 002660 456 --HDQQSVADALLKLVADKQLWARCRQNGLKN---I-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~~~~~~~~~~~~~~---~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
-+.+++.++|.+++.+++ -..+++++++. + ..=.....++.+++.+.+..
T Consensus 412 ~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 358899999999998752 12333333333 3 35566777777777777654
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0037 Score=64.24 Aligned_cols=140 Identities=20% Similarity=0.330 Sum_probs=85.9
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.++++.|.-|+ ||+ .++.++.+. +...++.+|+|..... ...+.+.++ ..+++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~l--t~kvl~~L~--~~~~nl~iV~gs~~p~----------l~~l~k~~~---~~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNL--TLKVLAELE--QKNVNLHIVVGSSNPT----------LKNLRKRAE---KYPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhh--HHHHHHHhh--ccCeeEEEEecCCCcc----------hhHHHHHHh---hCCCeeeEec-
Confidence 34557888887666 554 455666664 2335888889965421 233444444 3467766655
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC--EEE--cCCCCchhccccCCCeEEeCC---CCHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP--IVA--TKNGGPVDIHRVLDNGLLVDP---HDQQSVAD 463 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P--Vva--s~~gg~~eiv~~~~~g~lv~p---~d~~~la~ 463 (895)
.++|+.|+..| |.++.. -|.++.|++..|+| +|+ .+--.....++ .-|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~--~lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFE--ALGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHH--hcCchhhccCCCchHHHHH
Confidence 67899999999 998865 68999999999999 333 33222111111 12322222 24466777
Q ss_pred HHHHHHhCHHHHHHHHHH
Q 002660 464 ALLKLVADKQLWARCRQN 481 (895)
Q Consensus 464 ai~~ll~~~~~~~~~~~~ 481 (895)
.+.++..|+..+..+...
T Consensus 286 ~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 286 EILQIQKDYARRKNLSFG 303 (318)
T ss_pred HHHHhhhCHHHhhhhhhc
Confidence 788888888766655443
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00046 Score=71.39 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=39.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
.|...++.++++++++++++++ +||+.+ | ++|.+.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999998 677776 8 99999999999995
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.1 Score=59.41 Aligned_cols=91 Identities=10% Similarity=0.088 Sum_probs=58.2
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCC-CeEEeCC--CCHHHHH
Q 002660 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLD-NGLLVDP--HDQQSVA 462 (895)
Q Consensus 387 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~-~g~lv~p--~d~~~la 462 (895)
....+..++..+++.+ |++|-.-+ =.++=|++.|+|+|+-.. .-...++.+-+ ..++++. .+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 4444556888999999 99875432 257889999999998542 22233333222 2344443 4567899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHh
Q 002660 463 DALLKLVADKQLWARCRQNGLKNI 486 (895)
Q Consensus 463 ~ai~~ll~~~~~~~~~~~~~~~~~ 486 (895)
+.+.+++++.+..++.-+......
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999877665444443333
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0033 Score=70.68 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=123.3
Q ss_pred hhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 304 IMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 304 ~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
+...+++++..++++.++ +.|-.+.++.-.-++. +.-|+-+| +.|.+++ +++...+++++++.|+..
T Consensus 421 R~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL--~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 421 RAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQIL--SAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHH--HhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCCh
Confidence 344566666666666665 4666566666665554 34454444 5565543 567899999999999864
Q ss_pred -cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-------CCCCchhcccc-CCCeEEe
Q 002660 383 -QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-------KNGGPVDIHRV-LDNGLLV 453 (895)
Q Consensus 383 -~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-------~~gg~~eiv~~-~~~g~lv 453 (895)
+..|.+..+.++..+.|..| |+++=|- .-|-..+.+|++.+|+|||+- ..|+. ++.. |-..+++
T Consensus 489 eRL~f~p~~~~~~h~a~~~iA----DlvLDTy-PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA 561 (620)
T COG3914 489 ERLRFLPPAPNEDHRARYGIA----DLVLDTY-PYGGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVA 561 (620)
T ss_pred hheeecCCCCCHHHHHhhchh----heeeecc-cCCCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhc
Confidence 79999999999999999999 9988652 234457999999999999973 23332 2222 1122333
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 002660 454 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~~ 506 (895)
+ +.++..+.-..+-.|...+++.+..-.+.. . -|+.+..++++..+|.++-
T Consensus 562 ~--s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~ 615 (620)
T COG3914 562 D--SRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW 615 (620)
T ss_pred C--CHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence 3 555555544455557767777666666555 2 6999999999999998764
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.015 Score=61.32 Aligned_cols=170 Identities=14% Similarity=0.052 Sum_probs=108.6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEE--EecCCCccccccchHHHHHHHHHHHHhcCCCCc-EEeCCC
Q 002660 313 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLI--MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ-VAYPKH 389 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~li--vG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~-v~~~g~ 389 (895)
+..|+---+-|+.-+....|+++.+.. . .++.++ +|-+. +.++|.+++.+...++--.++ ..+...
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--G--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--C--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 334444445678888888888887764 2 345444 45422 246788888888888765445 456789
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecC-CCCCCchHHHHHHHcCCCEEEcC-CCCchhccccCCCeEEeCCCCHHHHHHHHHH
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLK 467 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps-~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ 467 (895)
+|.+|..++++.+ |+.++-- +..|+|..++ .+..|+||+.+. +.--.++.+.+ --++++.++. -.++.
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L---~~~~v- 284 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDL---DEDIV- 284 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcc---cHHHH-
Confidence 9999999999999 9988775 5678886544 678899998875 55556654433 2334443332 11111
Q ss_pred HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 468 LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 468 ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
.+..+++...-++.+. |+-+...+.+.++++.....
T Consensus 285 ----~e~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 285 ----REAQRQLASVDKNIIA-FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ----HHHHHHHHhhCcceee-ecCHhHHHHHHHHHHHhhCC
Confidence 1112222222233333 99999999999998876543
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.28 Score=56.19 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=53.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccC-CCeEEeCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLVDP- 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~-~~g~lv~p- 455 (895)
+++.+.++.|+.+ ++... +..+||. -+-.++++|++++|+|+|+-..-+ ...++.+. +.|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4677789988654 55555 1134442 244578999999999999976433 22233332 45665532
Q ss_pred -----CCHHHHHHHHHHHHhCH
Q 002660 456 -----HDQQSVADALLKLVADK 472 (895)
Q Consensus 456 -----~d~~~la~ai~~ll~~~ 472 (895)
-+.+++++++++++.++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~ 409 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGE 409 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCC
Confidence 16799999999999764
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.17 Score=58.43 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=71.4
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeCC
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVDP 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~p 455 (895)
.+.+.+++|+.+ ++... .+ ||. -+--++.+||+.+|+|+|+-...+- ...+ +..+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~----~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQ----AVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CEEEeecCCHHH---HhCCc----ccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 577889988765 55555 33 442 2344688999999999999775432 2233 24456777643
Q ss_pred ----CCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHhh---cCCHHHHHHHHHHHHHcccCCC
Q 002660 456 ----HDQQSVADALLKLVADKQ------LWARCRQNGLKNIH---LFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 456 ----~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~~---~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
-+.++++++|.+++.+++ ..+++++.+++.+. -=|.....++|++.+.+.+++-
T Consensus 408 ~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~~~ 474 (481)
T PLN02992 408 PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLERV 474 (481)
T ss_pred CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 477899999999997632 22344444444441 1233444566666666655543
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00086 Score=83.42 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=46.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+++..||++ .....+..+++++.|++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 457788888886 356677788999999887 599999999999999999999887
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.25 Score=56.74 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=53.7
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhccccC-CCeEEe-CC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRVL-DNGLLV-DP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~~-~~g~lv-~p 455 (895)
++..+.+++|+.+ ++... +.++||.- -|+ .+++||+++|+|+|+....+- ...+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988765 55553 01446533 233 588999999999999765332 2222222 566665 33
Q ss_pred CCHHHHHHHHHHHHhCHH
Q 002660 456 HDQQSVADALLKLVADKQ 473 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~ 473 (895)
-+.++++++|++++.+++
T Consensus 395 ~~~~~v~~av~~lm~~~~ 412 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE 412 (451)
T ss_pred ccHHHHHHHHHHHHcCCc
Confidence 477899999999998653
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.35 Score=55.75 Aligned_cols=109 Identities=14% Similarity=0.089 Sum_probs=64.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~p--- 455 (895)
..+.++.|+. .+++.++ .++||.= -|+ .+.+|++.+|+|+|+-...+- ...+.+ -+.|+.++.
T Consensus 326 g~v~~w~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 396 (456)
T PLN02210 326 GVVLEWSPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAV 396 (456)
T ss_pred eEEEecCCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecccc
Confidence 3456888775 4666661 1255422 233 478899999999999765432 223333 467777642
Q ss_pred ---CCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 456 ---HDQQSVADALLKLVADKQ------LWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 456 ---~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
-+.+++++++++++.+++ ..+++++.+++.+ +-=|...-.++|++.
T Consensus 397 ~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 397 DGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred CCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 367899999999997643 2233444455544 223333334444443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=63.73 Aligned_cols=148 Identities=14% Similarity=0.196 Sum_probs=72.7
Q ss_pred CCeEEEecCCCCCCcccccccCCCChHHHHHHHHHH--HHHhhhhhhcccCCCCCCCCcEEEecc-ccchhHHHHHhccC
Q 002660 90 SGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNH--IIRMSNVLGEQIGGGKPVWPVAIHGHY-ADAGDSAALLSGAL 166 (895)
Q Consensus 90 ~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~--~~~~~~~l~~~~~~~~~~~pDvVh~h~-~~~~~~~~~~~~~~ 166 (895)
+||++++...... .....-+++..|...+.+. ..+.+..|++ +++.||||.+|. |-.++ .+....
T Consensus 19 ~GV~~~~y~~~~~----~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~-----~Gf~PDvI~~H~GWGe~L---flkdv~ 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRG----PTPGTHPYVRDFEAAVLRGQAVARAARQLRA-----QGFVPDVIIAHPGWGETL---FLKDVF 86 (171)
T ss_pred CCcEEEEeCCCCC----CCCCCCcccccHHHHHHHHHHHHHHHHHHHH-----cCCCCCEEEEcCCcchhh---hHHHhC
Confidence 3888888765221 1223445555555544333 2223334444 258899999996 33222 233333
Q ss_pred -CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHH
Q 002660 167 -NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245 (895)
Q Consensus 167 -~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l 245 (895)
++|++...--++............++.. .....+...+-......+..||..+++|.+.... | ++.+.
T Consensus 87 P~a~li~Y~E~~y~~~g~d~~FDpe~p~~-~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~----f---P~~~r--- 155 (171)
T PF12000_consen 87 PDAPLIGYFEFYYRASGADVGFDPEFPPS-LDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ----F---PAEFR--- 155 (171)
T ss_pred CCCcEEEEEEEEecCCCCcCCCCCCCCCC-HHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh----C---CHHHH---
Confidence 6776553321100000000000000000 1111111111112345688999999999976553 2 33211
Q ss_pred HHhHhccccccCCCCCCEEEeCCCCCCCCC
Q 002660 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHI 275 (895)
Q Consensus 246 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f 275 (895)
+||.||+.|||++.+
T Consensus 156 ---------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ---------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ---------------cCcEEeecccchhhc
Confidence 289999999999876
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0023 Score=76.15 Aligned_cols=54 Identities=13% Similarity=0.037 Sum_probs=48.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+++..|+++ ...+.+..++++++|++. |++++++||-+...+..+.+++|+
T Consensus 426 ~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 426 GTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 457788888887 467888999999999998 599999999999999999999998
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.58 Score=54.20 Aligned_cols=171 Identities=12% Similarity=0.114 Sum_probs=89.5
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
...+.++.|.+.. .+.+..++.+++... ..+.++++........ ...+...+.+... ...+.+.++
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w 350 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGW 350 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCC
Confidence 3457788887642 233566666666552 2443455532211000 0001111111111 235777899
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeC-----CCCHH
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVD-----PHDQQ 459 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~-----p~d~~ 459 (895)
+|+. .++... +.++||.- +--.+.+||+++|+|+|+-...+ ....+ +.-+.|+.+. .-+.+
T Consensus 351 ~PQ~---~vL~h~--~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~ 421 (477)
T PLN02863 351 APQV---AILSHR--AVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421 (477)
T ss_pred CCHH---HHhcCC--CcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHH
Confidence 8874 466653 11566633 33358899999999999966433 22222 2335676662 12678
Q ss_pred HHHHHHHHHHh-CHHH---HHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 460 SVADALLKLVA-DKQL---WARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 460 ~la~ai~~ll~-~~~~---~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++++.+++. +++. .+++++.+++.+ +.=|...-.++|++.+.
T Consensus 422 ~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 422 ELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 99999999883 4332 233444444444 22234444566666554
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00053 Score=64.28 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=43.0
Q ss_pred eEEEEEecCCCCcc---------------hhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHHHHHHhCC
Q 002660 613 HIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHSFLVSGH 668 (895)
Q Consensus 613 kli~~DiDGTL~~~---------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~~~l~~l~ 668 (895)
|+|++|+||||... ..+.+.+.|+.|+++ |+.++|+|++ +...+...++.++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999322 356899999999987 5999999999 7777777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00082 Score=73.43 Aligned_cols=65 Identities=9% Similarity=0.098 Sum_probs=49.7
Q ss_pred cCeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 611 RKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 611 ~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..|+++||+|||| ...+.+...+++++|+++ |+.|+++|+|+ ...+.+-++.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 3569999999999 345667889999999998 59999999999 555555567888863 44555554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00024 Score=75.35 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=50.1
Q ss_pred eEEEEEecCCCC--cc----hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---HHHHHHHhCCCCCCCCCEEEEcC
Q 002660 613 HIFVISVDCDST--TG----LLDATKKICEAVEKERTEGSIGFILSTSMTIS---EIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 613 kli~~DiDGTL~--~~----~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~---~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
|+|+||+||||. .. +.+.+.+++++|+++ |+.|+++|||+.. .+...++.+|++. .++-++++.
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 689999999992 23 778999999999998 5999999987555 5777888888863 345566643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0038 Score=78.85 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=38.3
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+++++++++++ |+.++++|||++..+..+.+++|+
T Consensus 567 Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56788999999999998 599999999999999999999998
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.11 Score=55.78 Aligned_cols=144 Identities=12% Similarity=0.032 Sum_probs=93.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE-eCCCC
Q 002660 312 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA-YPKHH 390 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~ 390 (895)
++..|+---.-++.-+....++++.... ....++.+-+|-|.. .++|.+++.+...++--.+++. +..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-------n~~Yi~~V~~~~~~lF~~~~~~iL~e~m 254 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-------NQAYIQQVIQAGKELFGAENFQILTEFM 254 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-------hHHHHHHHHHHHHHhcCccceeEhhhhC
Confidence 3444555555778888888888887643 222333333455432 3567888888888875555665 56799
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe--CCCCHHHHHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV--DPHDQQSVADALLK 467 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv--~p~d~~~la~ai~~ 467 (895)
|.+|..++++.| |+.++... ..|+|..+ =.+.+|+||+.+.....-..+.+.+--+++ +.-|...+.++=++
T Consensus 255 pf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rq 329 (360)
T PF07429_consen 255 PFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQ 329 (360)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHH
Confidence 999999999999 99999974 67887654 478899999988765544444332222333 33344555555444
Q ss_pred HH
Q 002660 468 LV 469 (895)
Q Consensus 468 ll 469 (895)
+.
T Consensus 330 l~ 331 (360)
T PF07429_consen 330 LA 331 (360)
T ss_pred Hh
Confidence 43
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.024 Score=62.91 Aligned_cols=145 Identities=14% Similarity=0.198 Sum_probs=86.0
Q ss_pred CCCCCcE-EEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPV-ILALA-RPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~-il~vg-rl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.++++++ .+.-| |-.+- +.++.++++++.+.+ ..+++.+++...+.. ....+.......+....+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 4556654 34444 44333 456888999999974 445666655543321 1122333434443322333
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhcc----------------ccCC
Q 002660 386 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIH----------------RVLD 448 (895)
Q Consensus 386 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv----------------~~~~ 448 (895)
+. ..+-.++++.| |+.+.. .|.+.+|++..|+|.|..- .+...-.+ .+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 999887 5899999999999998743 32222111 1100
Q ss_pred --CeEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 002660 449 --NGLLVDPHDQQSVADALLKLVADKQLWAR 477 (895)
Q Consensus 449 --~g~lv~p~d~~~la~ai~~ll~~~~~~~~ 477 (895)
.-++-+.-+++.+++++..+++|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222334789999999999999876433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.09 Score=55.16 Aligned_cols=137 Identities=16% Similarity=0.258 Sum_probs=78.9
Q ss_pred HHhhhhcCCCCCcEEEEE------eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILAL------ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~v------grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
..+++++...+.++|+.= .-....+++..+.++++.|.+ .. . +++. ++. +..+.+
T Consensus 171 evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g-i-V~ip-r~~-------------~~~eif 231 (346)
T COG1817 171 EVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG-I-VLIP-REK-------------EQAEIF 231 (346)
T ss_pred HHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc-E-EEec-Cch-------------hHHHHH
Confidence 356677777765555431 123356777778888888843 22 2 2333 221 122333
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC---CchhccccCCCeEE
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLL 452 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g---g~~eiv~~~~~g~l 452 (895)
+.+. ++..+... .+.+.-+|. | +.++ -+-|.-.-||+..|+|.|++..| +..+... ..|.+
T Consensus 232 e~~~---n~i~pk~~-vD~l~Llyy-a----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~ 295 (346)
T COG1817 232 EGYR---NIIIPKKA-VDTLSLLYY-A----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLL 295 (346)
T ss_pred hhhc---cccCCccc-ccHHHHHhh-h----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCce
Confidence 3332 23222221 122333444 4 4544 34567789999999999999865 3333332 46889
Q ss_pred eCCCCHHHHHHHHHHHHhCHH
Q 002660 453 VDPHDQQSVADALLKLVADKQ 473 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~ 473 (895)
++..|+.+..+...+.+.++.
T Consensus 296 ~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 296 YHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred eecCCHHHHHHHHHHHhhchh
Confidence 998898877777777776654
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.14 Score=52.36 Aligned_cols=202 Identities=12% Similarity=0.057 Sum_probs=112.7
Q ss_pred CCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 142 PVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 142 ~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
+.+||++.+...-+..++.++.+..+.+.++.+.+.- .-.+..|.||+
T Consensus 68 ~~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~Pr--------------------------------lp~~~fDlviv 115 (329)
T COG3660 68 EQRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDPR--------------------------------LPYNHFDLVIV 115 (329)
T ss_pred cCCCceEEecccchhHHHHHHHHhcCCceEEEeeCCC--------------------------------CCcccceEEec
Confidence 3679999999988888888898888887777766530 02456788999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+-.+.++++....+++. .+.-.|+-|...+. ....
T Consensus 116 p~HD~~~~~s~~~~Nil-----------------------pi~Gs~h~Vt~~~l----------------------Aa~~ 150 (329)
T COG3660 116 PYHDWREELSDQGPNIL-----------------------PINGSPHNVTSQRL----------------------AALR 150 (329)
T ss_pred cchhhhhhhhccCCcee-----------------------eccCCCCcccHHHh----------------------hhhH
Confidence 88776665322111110 11111222221111 1222
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNI-----TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi-----~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
+..+.++..+...+-+.+|.-.+.-.. ..+..++.+..+ +....+ ++--++... ..+..++.
T Consensus 151 e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~-lisfSRRTp-----------~~~~s~l~ 217 (329)
T COG3660 151 EAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSF-LISFSRRTP-----------DTVKSILK 217 (329)
T ss_pred HHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceE-EEEeecCCc-----------HHHHHHHH
Confidence 334445445667788889876544433 233333333322 222333 333444332 22233333
Q ss_pred h-cCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc
Q 002660 377 K-YDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP 440 (895)
Q Consensus 377 ~-~~l~~~v~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~ 440 (895)
. +.-.+.+++.+.= ...-..+++..| |.+|.+... . ..+-||.++|+||-+-...+.
T Consensus 218 ~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDS--i-nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 218 NNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADS--I-NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred hccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecch--h-hhhHHHhccCCCeEEEecCCc
Confidence 3 3444445554431 233578899999 999998532 2 236799999999987654443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.058 Score=58.69 Aligned_cols=243 Identities=11% Similarity=0.040 Sum_probs=131.2
Q ss_pred CCCcEEEeccc-c-chhHHHHHhccC-CCCEEEEeCCC-chhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYA-D-AGDSAALLSGAL-NVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~-~~~~~~~~~~~~-~ip~v~t~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.+||++.+-+. + ...++..+.+.. .+|+|+++--. |.|+ -.| -....+.+|.
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr--------------------~~R----a~~i~~~~D~ 139 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWR--------------------PKR----AVKIAKYVDH 139 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeec--------------------hhh----HHHHHHHhhH
Confidence 78998887654 4 444444454432 49999887743 2222 001 1124678899
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++.-+.+.+.+ ..+ |+ .++.|.+.. |.-.+.+
T Consensus 140 lLailPFE~~~y-~k~-----------------g~--------~~~yVGHpl~d~i~~~~-------------------- 173 (381)
T COG0763 140 LLAILPFEPAFY-DKF-----------------GL--------PCTYVGHPLADEIPLLP-------------------- 173 (381)
T ss_pred eeeecCCCHHHH-Hhc-----------------CC--------CeEEeCChhhhhccccc--------------------
Confidence 999888766543 221 11 233343332 2111211
Q ss_pred CchhHHhhhhcCCCCCcE-EEEEeC-CC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH-H
Q 002660 298 PPIWSEIMRFFTNPRKPV-ILALAR-PD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL-K 373 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~-il~vgr-l~-~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~-~ 373 (895)
.....+.+++.+.++++ .+..|. -. -.+-...+++|++.+.+ ..+++.+++...... ..++. .
T Consensus 174 -~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~--~~~~~~~vlp~~~~~----------~~~~~~~ 240 (381)
T COG0763 174 -DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA--RYPDLKFVLPLVNAK----------YRRIIEE 240 (381)
T ss_pred -cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh--hCCCceEEEecCcHH----------HHHHHHH
Confidence 11224555666666554 444453 22 23456788889988864 345566555544321 11222 2
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhcccc-----C
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRV-----L 447 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~-----~ 447 (895)
..........+.+ ...+-...+..| |+.+.. .|.+.+|++.+|+|.|++- .....-.+.. .
T Consensus 241 ~~~~~~~~~~~~~----~~~~~~~a~~~a----D~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~ 307 (381)
T COG0763 241 ALKWEVAGLSLIL----IDGEKRKAFAAA----DAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLP 307 (381)
T ss_pred HhhccccCceEEe----cCchHHHHHHHh----hHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCC
Confidence 2222221122222 244677899999 998877 5899999999999998753 3222221110 0
Q ss_pred -------CCe-EEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 448 -------DNG-LLV-----DPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 448 -------~~g-~lv-----~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
-.| .++ ..-.++.+++++..++.+...++++.+.
T Consensus 308 yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 308 YVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred cccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 001 111 1125789999999999988554444333
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00098 Score=62.86 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=45.5
Q ss_pred eEEEEEecCCCC-----------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC--------HHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMT--------ISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~--------~~~~~~~l~~l~l 669 (895)
|+++||+||||. ....+.+.++++.|+++ |+.++|+|+++ ...+..+++.+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 689999999995 24457788999999987 59999999999 7788889999887
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=1.3 Score=50.81 Aligned_cols=115 Identities=14% Similarity=0.088 Sum_probs=70.1
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~p--- 455 (895)
+.+.+++|+.+ +++.. +.++||.- +-..+.+||+.+|+|+|+-...+- ...+ +.-+.|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 66678888765 45443 11456532 344788999999999999775442 2233 22345665432
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHHcccC
Q 002660 456 --HDQQSVADALLKLVADK-QLWARCRQNGLKNI----HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~----~~~s~~~~a~~~~~~~~~~~~ 507 (895)
-+.+++.++++++++++ +..+++++++++.- +.=|.....+++++.+.+..+
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 37789999999999864 44444555544433 223444556666666665544
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.005 Score=63.87 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.+.+|..+++.+++++|+ +++++ +||+.+ | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 455799999999999886 57887 788877 8 9998886555443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0049 Score=73.15 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=48.4
Q ss_pred cCeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCC-eEEEEEcCCCHHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGS-IGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g-~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
-.+.+++..||++ ...+.+..+++++.|+++ | +.++|+||.+...+..+++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3567888999988 356788999999999987 6 99999999999999999999987
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.013 Score=62.49 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=36.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|..++..++++++++++++++ +||+.+ | +.+=+.+|..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4778999999999999999988 888887 8 9999999976543
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0064 Score=72.02 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=48.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...++++.||++ ...+.+..++++++|+++ |+.++++||.+...+..+++++|+
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 467889999998 366788999999999998 599999999999999999999887
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.069 Score=56.71 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=58.5
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCch-hhHHHHHHHhhc-cHHHHHh-hhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGR-DKLEQLLKQARL-SRDEINA-TYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~e~~~l~~ad~ 218 (895)
-+.||.|+... .++++|+.++.+.|+|+++|-|+... +....+....+. ....++. +.+++..+ =+.+++.||.
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCe
Confidence 34699999886 78999999999999999999999864 333334443332 0111221 22333333 3457999999
Q ss_pred EEeCChHHHHHHHh
Q 002660 219 VITSTRQEIEEQWR 232 (895)
Q Consensus 219 vi~~s~~~~~~~~~ 232 (895)
|++..+...+.|.+
T Consensus 249 I~~l~~~n~~~q~~ 262 (268)
T PF11997_consen 249 ITPLYEYNREWQIE 262 (268)
T ss_pred ecccchhhHHHHHH
Confidence 99999876655533
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.013 Score=73.41 Aligned_cols=56 Identities=7% Similarity=-0.020 Sum_probs=47.4
Q ss_pred cCeEEEEEecC-----CC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 611 RKHIFVISVDC-----DS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 611 ~~kli~~DiDG-----TL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
-.|.+++.+++ |+ ...+.+.++++++.|++. |++++++||-+...+..+.+++|+.
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 34677777765 33 367788999999999998 5999999999999999999999983
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.012 Score=73.14 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=38.8
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+.+.++++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 513 ~Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 367788999999999998 599999999999999999999998
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0066 Score=76.18 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=37.9
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.++++++++++. |++++++||.+...+..+.+++|+
T Consensus 536 Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 56778999999999998 599999999999999999999998
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.012 Score=73.23 Aligned_cols=42 Identities=10% Similarity=-0.061 Sum_probs=38.9
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred hCcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 367788999999999998 599999999999999999999998
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0028 Score=62.23 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=46.6
Q ss_pred cCeEEEEEecCCCCc--c-------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCH------------HHHHHH
Q 002660 611 RKHIFVISVDCDSTT--G-------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIHSF 663 (895)
Q Consensus 611 ~~kli~~DiDGTL~~--~-------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~------------~~~~~~ 663 (895)
.+|+++||+||||.. . .-+.+.++|+.|+++ |+.++|+|..+. ..+..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 468999999999932 1 125688999999987 599999996443 245778
Q ss_pred HHhCCCCCCCCCEEEEcC
Q 002660 664 LVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 664 l~~l~l~~~~~d~~I~~n 681 (895)
++.+++. .+.+++++
T Consensus 88 l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 88 LEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHcCCC---EEEEEecC
Confidence 8999984 34555544
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0022 Score=68.60 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=41.7
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEecCcc
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
++.+-.+...++.+++++|++++++++ +||+.+ | ++|-+.+|+ .+++.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566778999999999999999998 777777 8 999999997 45665543
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.013 Score=73.71 Aligned_cols=43 Identities=9% Similarity=0.109 Sum_probs=39.2
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
...+.+.++++++++++. |+++++.||-+...+..+.+++|+.
T Consensus 577 ~Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred cCCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 367788999999999998 5999999999999999999999983
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.014 Score=71.57 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=45.8
Q ss_pred CeEEEEEe---cCCC--------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 612 KHIFVISV---DCDS--------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 612 ~kli~~Di---DGTL--------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+.+++.+ ++.| .+.+.+.++++++++++. |+++++.||.+...+..+.+++|+.
T Consensus 417 ~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 417 YRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 45666666 3333 367888999999999998 5999999999999999999999983
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0098 Score=70.97 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=47.6
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+++..|+++ ...+.+.+++++++|++. |++++++||=+...+..+.+++|+
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 356777788887 367788999999999998 599999999999999999999998
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.023 Score=59.75 Aligned_cols=66 Identities=11% Similarity=0.069 Sum_probs=47.3
Q ss_pred ccCeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHhC-CCCCCCCCEEEEc
Q 002660 610 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSG-HLSPSDFDAFICN 680 (895)
Q Consensus 610 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l-~l~~~~~d~~I~~ 680 (895)
...+.++||+|||| -....+...++|+.|+++| +.+++.| .|+......-|..+ +++ ..+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g----~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAG----KPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcC----CeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecH
Confidence 34568999999999 4567788999999999984 6666654 56676677778774 443 234555554
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.69 E-value=1.8 Score=49.77 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=67.7
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p--- 455 (895)
..+.+++|+.+ +++.. +.++||.- +--++.+||+++|+|+|+....+ ...++ +..+.|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 45568888765 45444 11445532 34478899999999999976533 22333 23466776642
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHcc
Q 002660 456 --HDQQSVADALLKLVADK-QLWARCRQNGLKNIH----LFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~----~~s~~~~a~~~~~~~~~~ 505 (895)
-+.+++++++++++.++ +..+++++++++.-+ .=....+.++|++.+.+.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 37889999999999764 344555555544432 112122356666666543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0023 Score=68.79 Aligned_cols=64 Identities=6% Similarity=0.064 Sum_probs=47.4
Q ss_pred CeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 612 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 612 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.|+|+||+|||| .....+.+.++|++|+++ |+.|+++|+|+ .......++.+|+.. .++-++++
T Consensus 2 ~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts 70 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSS 70 (279)
T ss_pred ccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecH
Confidence 468999999999 344455689999999997 59999999976 555556677888852 23445554
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.91 Score=52.10 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=80.2
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHH-HHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS-VLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~-~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..+.++.|... ..+.+..+..+++... . .+..++......+.-...... +-. ...++.. ..++.+.+
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~---gf~er~~-~~g~~v~~ 340 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPE---GFLSRTE-DKGMVVKS 340 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCCh---HHHHhcc-CCcEEEEe
Confidence 456788888863 3345566666666653 2 342344421110000000000 001 1112221 23677889
Q ss_pred CCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccc-cCCCeEEeCC-----C
Q 002660 389 HHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHR-VLDNGLLVDP-----H 456 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~-~~~~g~lv~p-----~ 456 (895)
++|+.+ +++.+ ++ ||. -+--++++||+++|+|+|+....+ ....+. .-+.|+.++. -
T Consensus 341 W~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 341 WAPQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred eCCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 988765 66777 56 442 233458899999999999976432 233333 3367877752 2
Q ss_pred CHHHHHHHHHHHHhCHH
Q 002660 457 DQQSVADALLKLVADKQ 473 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~ 473 (895)
+.++++++|++++++++
T Consensus 410 ~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 410 SSTEVEKRVQEIIGECP 426 (451)
T ss_pred CHHHHHHHHHHHhcCHH
Confidence 67899999999998754
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.67 E-value=2 Score=50.06 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=63.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----h-hccccCCCeEEeCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----V-DIHRVLDNGLLVDP- 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~-eiv~~~~~g~lv~p- 455 (895)
+++.+.+++|+.+ +++.. +.++||.= -| -.+++||+.+|+|+|+....+- . .+++..+.|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4556668888654 55333 01445522 23 3588999999999999765331 1 23444456766531
Q ss_pred ------------CCHHHHHHHHHHHHh-CHHHH---HHHHHHHHHHh-h-cCCHHHHHHHHHHHH
Q 002660 456 ------------HDQQSVADALLKLVA-DKQLW---ARCRQNGLKNI-H-LFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ------------~d~~~la~ai~~ll~-~~~~~---~~~~~~~~~~~-~-~~s~~~~a~~~~~~~ 502 (895)
-+.++++++|+++++ +++.+ +++++.+++.+ + -.|+.. .++|++.+
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~-l~~lv~~~ 476 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTA-LKKFIQDV 476 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHH-HHHHHHHH
Confidence 267899999999996 54332 23344444444 2 233333 34444444
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0033 Score=56.09 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=41.3
Q ss_pred EEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHhCCCC
Q 002660 615 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLS 670 (895)
Q Consensus 615 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l~l~ 670 (895)
++||+|||| ...+.+...+++++|+++| ..+++.| .|+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g----~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERG----KPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTT----SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcC----CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 4667788899999999984 7777766 46777888888999985
|
... |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.2 Score=58.28 Aligned_cols=243 Identities=13% Similarity=0.047 Sum_probs=130.2
Q ss_pred CCCcEEEec-cccchhHHHHHhccCCC--CEEEEeCCC-chhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGH-YADAGDSAALLSGALNV--PMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h-~~~~~~~~~~~~~~~~i--p~v~t~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.+||++.+- +++..+-.+..+++.|+ |+|+.+--. |.++. .| -+...+..|.
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~---------------------~R---ikki~k~vD~ 364 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRP---------------------KR---KTILEKYLDL 364 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCc---------------------ch---HHHHHHHhhh
Confidence 789988875 45655555555566785 988877633 11110 11 1224567888
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++.=+-|.+.+ +. +|+ +++.+-+.. |.-...+
T Consensus 365 ll~IfPFE~~~y-~~-----------------~gv--------~v~yVGHPL~d~i~~~~-------------------- 398 (608)
T PRK01021 365 LLLILPFEQNLF-KD-----------------SPL--------RTVYLGHPLVETISSFS-------------------- 398 (608)
T ss_pred heecCccCHHHH-Hh-----------------cCC--------CeEEECCcHHhhcccCC--------------------
Confidence 999877666543 22 121 344444433 2211110
Q ss_pred CchhHHhhhhcCCCCCcE-EEEEe-CCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNPRKPV-ILALA-RPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~-il~vg-rl~~-~Kgi~~ll~A~~--~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
.....+++++.++++++ .+.-| |-.+ .+.++.+++|++ .+. + ++++++...+.. ..+.+.
T Consensus 399 -~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~ 463 (608)
T PRK01021 399 -PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLIL 463 (608)
T ss_pred -CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHH
Confidence 11123455555556554 34444 3333 346788899988 553 2 355555433211 112333
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-CCCCchh---------
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD--------- 442 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-~~gg~~e--------- 442 (895)
...+..+.. .+.+.. .++-.++++.| |+.+.. .|.+.+|++.+|+|.|.. ..+...-
T Consensus 464 ~~~~~~~~~-~~~ii~---~~~~~~~m~aa----D~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki 530 (608)
T PRK01021 464 EVLQQEGCL-HSHIVP---SQFRYELMREC----DCALAK-----CGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKI 530 (608)
T ss_pred HHHhhcCCC-CeEEec---CcchHHHHHhc----Ceeeec-----CCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhc
Confidence 333332211 122221 11236899999 999988 589999999999999873 2322111
Q ss_pred ---------ccccCC--CeEE--eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 443 ---------IHRVLD--NGLL--VDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 443 ---------iv~~~~--~g~l--v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
++.+.. --++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 531 ~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 531 ILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred cCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 111110 1122 1234689999996 888888766665554443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.017 Score=72.13 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=38.9
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 548 LDPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred cCccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 367888999999999998 599999999999999999999998
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.01 Score=72.65 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=48.6
Q ss_pred cCeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
-++.+++..||++ ...+.+..++++++|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3567888899988 367788999999999998 599999999999999999999997
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0085 Score=75.78 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=38.7
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
..+.+.++++++.+++. |++++++||.+...+..+.+++|+.
T Consensus 645 Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC
Confidence 56778999999999998 5999999999999999999999983
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.45 E-value=2.5 Score=48.67 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccc-cchHHHHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS-STSASVLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..+.++.|.+. ..+.+..+..+++.+. . .+..++......+... ....+.........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 456778888754 4456677777777763 1 3323444321100000 0000000001112222 234556678
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeC-----CCCH
Q 002660 389 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVD-----PHDQ 458 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~-----p~d~ 458 (895)
++|+.+ +++..+ ..+||. -+-.++++||+.+|+|+|+-...+- ...+.+ -+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVT----HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEe----eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 988654 566651 123442 2344688999999999999765332 222222 12454442 1267
Q ss_pred HHHHHHHHHHHhCHH
Q 002660 459 QSVADALLKLVADKQ 473 (895)
Q Consensus 459 ~~la~ai~~ll~~~~ 473 (895)
+++++++.++++++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 899999999997543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.018 Score=59.16 Aligned_cols=49 Identities=14% Similarity=0.030 Sum_probs=34.7
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
..-....|..|...|+.++ +.+.+..+| -||+.+ | ++||+.|+.++++.
T Consensus 154 ~~g~~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 154 VLTLRCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred ECCccCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 3333455666777666554 567777778 566666 6 99999999999985
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0082 Score=57.27 Aligned_cols=79 Identities=14% Similarity=-0.004 Sum_probs=44.4
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
..+|+|.+.+. +...+..+....-++|.++++|.....+ ...+.......|.+... ...-.||.|+.
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y-------P~~~~~~rd~~~~~~ni-----~saLaAD~v~F 125 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY-------PVSPGQERDFQYGMNNI-----YSALAADRVVF 125 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC-------CCCCCccccccHHHHHH-----HHHHhceeeee
Confidence 55899999886 3222222232445799999999753222 00011111112223322 25668999999
Q ss_pred CChHHHHHHHhh
Q 002660 222 STRQEIEEQWRL 233 (895)
Q Consensus 222 ~s~~~~~~~~~~ 233 (895)
.|....+.+...
T Consensus 126 NS~~nr~sFL~~ 137 (168)
T PF12038_consen 126 NSAFNRDSFLDG 137 (168)
T ss_pred cchhhHHHHHHH
Confidence 998776665543
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=2.9 Score=48.66 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=51.5
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC--
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p-- 455 (895)
.+.+.++.|+.+ ++...+ ..+||.= -|+ .+.+||+++|+|+|+-..-+ ...++ +.-+.|+.++.
T Consensus 340 g~~v~~w~PQ~~---iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 340 GLVWPTWAPQKE---ILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred CeEEeecCCHHH---HhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 356668877654 555550 0244422 233 58899999999999966432 22222 33466776642
Q ss_pred -----CCHHHHHHHHHHHHhCH
Q 002660 456 -----HDQQSVADALLKLVADK 472 (895)
Q Consensus 456 -----~d~~~la~ai~~ll~~~ 472 (895)
-+.++++++|.+++.++
T Consensus 411 ~~~~~~~~e~l~~av~~vm~~~ 432 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLMGGG 432 (480)
T ss_pred ccCCcCcHHHHHHHHHHHhcCC
Confidence 25789999999999764
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0072 Score=57.77 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=40.9
Q ss_pred EEEEEecCCCCcc--------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHH---HHHHHhC
Q 002660 614 IFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEI---HSFLVSG 667 (895)
Q Consensus 614 li~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~---~~~l~~l 667 (895)
+|++|||||+|.. ..+...++.++++++ |.+++.+|+|+...+ +.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4799999999532 567788999999998 599999999997654 5688777
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.022 Score=68.04 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=45.1
Q ss_pred eEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+++..|+++ ...+.+..++++++|++. |++++++||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 34444457776 367788999999999998 599999999999999999999998
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.038 Score=65.34 Aligned_cols=190 Identities=14% Similarity=0.089 Sum_probs=122.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHH----HHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 309 TNPRKPVILALARPDPKKNITTLV----KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll----~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
..++...++++=|+...|...+.+ +.+..+++ ...|.+++|.|+...+... ...+....|+..++..+...+|
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkV 559 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKV 559 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceE
Confidence 346778899999999999765443 33333432 3446676555554333222 2466788888888888877788
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhccc--cCCCeEEeCCCCHHH
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR--VLDNGLLVDPHDQQS 460 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~--~~~~g~lv~p~d~~~ 460 (895)
.|....+-.--.-++..| ||-.+.|. .|..|..-+=++.-|.|-|+|..|+..|+.+ .+.||+++-. +.++
T Consensus 560 vFl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~-~~~~ 634 (750)
T COG0058 560 VFLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE-TVEE 634 (750)
T ss_pred EEeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC-chhh
Confidence 888887655455556666 99999886 7889998889999999999999999999986 7889999953 3333
Q ss_pred HHHHHHHHHhCHHHHHHH----HHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 002660 461 VADALLKLVADKQLWARC----RQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~----~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.-.....-.......... ...--... ..|+. .|...+.+.+..+..
T Consensus 635 v~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~ 685 (750)
T COG0058 635 VDALRADGYDPNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLP 685 (750)
T ss_pred HHHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhh
Confidence 332222222222122221 12122222 24565 666666666666543
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.012 Score=49.42 Aligned_cols=36 Identities=31% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCCcEEEecccc--chhHHHHHhccCCCCEEEEeCCCc
Q 002660 143 VWPVAIHGHYAD--AGDSAALLSGALNVPMLFTGHSLG 178 (895)
Q Consensus 143 ~~pDvVh~h~~~--~~~~~~~~~~~~~ip~v~t~H~~~ 178 (895)
++.||||+|... .+--+...|+.+|++.|+|-|++.
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence 689999999873 344456778899999999999974
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.11 E-value=3.9 Score=47.51 Aligned_cols=170 Identities=14% Similarity=0.120 Sum_probs=88.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
+..+.++.|.+. ..+.+..+..+++.+. ..+.++++...... ......+-+.+.+ +. .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~e---r~--~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMD---RV--MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHH---Hh--ccCeeeecc
Confidence 346777888763 3345666667776652 24434555321100 0000000011111 11 134455688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch-----hccccCCCeEEeCC---------
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-----DIHRVLDNGLLVDP--------- 455 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-----eiv~~~~~g~lv~p--------- 455 (895)
+|+.+ ++...+ .+.||.= -|+ .+.+||+++|+|+|+-...+-. -+++..+.|+.+..
T Consensus 348 ~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 87654 565541 1455532 233 4888999999999997653321 12334456776642
Q ss_pred CCHHHHHHHHHHHHhCHH----HHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 456 HDQQSVADALLKLVADKQ----LWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~----~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
-+.++++++|.+++.+++ ..+++++.+++.+ +.=|...-.++|++.+
T Consensus 419 ~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i 470 (475)
T PLN02167 419 VKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDL 470 (475)
T ss_pred ccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 267899999999997532 2334445555555 2223333344554443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.019 Score=68.62 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=47.9
Q ss_pred EEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 614 IFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 614 li~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
++++..||.+ ...+.+..++++++|++. |+++++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 477889999999999998 599999999999999999999998
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=67.57 Aligned_cols=53 Identities=8% Similarity=-0.019 Sum_probs=45.9
Q ss_pred eEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCe-EEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSI-GFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~-~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+++..||++ ...+.+..++++++|+++ |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45677788877 356778999999999998 59 9999999999999999999987
|
. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.014 Score=56.52 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|+.+|+.|++ |.+.+.+++ +||..| | ++|..-+..=++-
T Consensus 159 gKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa~afi~~ 198 (227)
T KOG1615|consen 159 GKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPADAFIGF 198 (227)
T ss_pred ccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCchhhhhcc
Confidence 79999999999 777677777 888888 8 8887664333333
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.023 Score=59.02 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCC----CHHHHHHHHHhCCCC
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSM----TISEIHSFLVSGHLS 670 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR----~~~~~~~~l~~l~l~ 670 (895)
.+++|+.++++ |+.++|+|+| ....+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 77888888887 5999999999 666788888889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.019 Score=58.81 Aligned_cols=55 Identities=13% Similarity=0.081 Sum_probs=44.7
Q ss_pred cCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHH--
Q 002660 611 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISE-- 659 (895)
Q Consensus 611 ~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~-- 659 (895)
.+-.++||+|-|+. ....+.+.++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 45689999999981 22446788899999988 59999999999766
Q ss_pred -HHHHHHhCCC
Q 002660 660 -IHSFLVSGHL 669 (895)
Q Consensus 660 -~~~~l~~l~l 669 (895)
..+.|.+.|+
T Consensus 152 ~T~~nL~~~G~ 162 (229)
T TIGR01675 152 ATLDNLINAGF 162 (229)
T ss_pred HHHHHHHHcCC
Confidence 6788888898
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.04 Score=70.32 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=38.3
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+.+.+++++++|++. |++++++||.+...+..+.+++|+
T Consensus 655 d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56778999999999998 599999999999999999999998
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.03 Score=56.97 Aligned_cols=47 Identities=21% Similarity=0.162 Sum_probs=41.0
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
.|-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeCC
Confidence 3557999999999999999999999 677777 8 999999999998863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.41 Score=51.99 Aligned_cols=194 Identities=15% Similarity=0.130 Sum_probs=111.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCC--CEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNV--PMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~i--p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
-.||+|.+....+..++..+++..|. +.|+..+-- ...+..|.||
T Consensus 56 ~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~---------------------------------~~~~~FDlvi 102 (311)
T PF06258_consen 56 PWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPR---------------------------------LPPRPFDLVI 102 (311)
T ss_pred CCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCC---------------------------------CCccccCEEE
Confidence 56999999998888888888888776 555444411 0245679999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEE---EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA---IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~---vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
++..+.... . +++. .-||.++.+.....
T Consensus 103 ~p~HD~~~~--------~----------------------~Nvl~t~ga~~~i~~~~l~~a------------------- 133 (311)
T PF06258_consen 103 VPEHDRLPR--------G----------------------PNVLPTLGAPNRITPERLAEA------------------- 133 (311)
T ss_pred ECcccCcCC--------C----------------------CceEecccCCCcCCHHHHHHH-------------------
Confidence 988642100 0 1332 23344443332211
Q ss_pred CchhHHhhhhcCCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNPRKPVILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~il~vgrl~~~K--gi~---~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
......++...+...+.+.+|.-...- +-+ .+++.+..+.+... ..+ +|..++... .+....|.
T Consensus 134 --~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp-------~~~~~~L~ 202 (311)
T PF06258_consen 134 --AAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTP-------PEAEAALR 202 (311)
T ss_pred --HHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCc-------HHHHHHHH
Confidence 111122333345566777888644332 333 55555555542222 233 355555432 22334444
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 439 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg 439 (895)
+..+ -.+.+.+...-+..-+..+|..| |.+++|. |..+ -+.||+++|+||..-...+
T Consensus 203 ~~~~---~~~~~~~~~~~~~nPy~~~La~a----d~i~VT~--DSvS-MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 203 ELLK---DNPGVYIWDGTGENPYLGFLAAA----DAIVVTE--DSVS-MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Hhhc---CCCceEEecCCCCCcHHHHHHhC----CEEEEcC--ccHH-HHHHHHHcCCCEEEecCCC
Confidence 4433 33566555655566699999999 9999995 3333 3689999999998876654
|
The function of this family is unknown. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.093 Score=62.97 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=99.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHH----hc
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLID----KY 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~----~~ 378 (895)
.+++...++++-|+...|...+ ++..+.++......+ ..++|.|+...... ....+++..|+..++ .-
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY--YMAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 5577788999999999998877 666655543323222 24455544332221 124567777888777 33
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+....-.--..++..| ||-.+.|. .|..|..-+=+|.-|.+.++|..|...|+.++ +.||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68888776555555566666 99999987 78899999999999999999999999999875 778888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+.
T Consensus 693 fG 694 (815)
T PRK14986 693 FG 694 (815)
T ss_pred eC
Confidence 84
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.026 Score=70.57 Aligned_cols=43 Identities=9% Similarity=0.058 Sum_probs=39.0
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
...+.+.++++++.++++ |+++.++||=+...+..+.+++|+.
T Consensus 545 ~Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 545 EDPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred cCCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 356778999999999998 5999999999999999999999984
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.03 Score=58.06 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEecCcc
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
.|..+++.++++++++++++++ +||+.+ | ++|.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578899999999999999998 888877 8 999999998 66665443
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.87 E-value=4.8 Score=46.44 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=48.8
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeC----
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVD---- 454 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~---- 454 (895)
+.+.++.|+.++-+ .. +...||.- +--++.+||+.+|+|+|+-...+- ..++ +..+.|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 55678888776444 33 11345422 233588999999999999765331 1222 2334565553
Q ss_pred --CCCHHHHHHHHHHHHh
Q 002660 455 --PHDQQSVADALLKLVA 470 (895)
Q Consensus 455 --p~d~~~la~ai~~ll~ 470 (895)
.-..++++++|+++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 408 EKVIGREEVASLVRKIVA 425 (470)
T ss_pred CCccCHHHHHHHHHHHHc
Confidence 1367899999999995
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.033 Score=58.01 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
+...+.++++++|++++++++ +||+.+ | ++|-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456689999999999999999 777777 8 999999997654
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.0086 Score=62.66 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=50.9
Q ss_pred EEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHh-CCCCCCCCCEEEEcCCce
Q 002660 615 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGSD 684 (895)
Q Consensus 615 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~-l~l~~~~~d~~I~~nGa~ 684 (895)
++||+|||| .....+.+.++++.++++ |+.+++.| ||+...+.+.+.+ ++++. .++-+|++..+.
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~~ 71 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSVT 71 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHHH
Confidence 579999999 345556888999999987 58888887 9999999998888 78752 456677765443
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.016 Score=60.85 Aligned_cols=66 Identities=9% Similarity=0.045 Sum_probs=48.1
Q ss_pred cCeEEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCC--CHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 611 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSM--TISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 611 ~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR--~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..++++||+||||. ..+.+.+.+++++|+++ |+.++|+|.. +...+.+.++.+|+..+.+|.++++
T Consensus 7 ~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred cCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 45689999999993 45678899999999998 5888886554 4444447889999851135655553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.085 Score=52.79 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=32.1
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
.+.|..|+..++.+.+.+ ++++++ +||+.+ | ++|.+.++.-.
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~~ 185 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVVF 185 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCccc
Confidence 356778999999988865 566766 888887 8 99988876543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.019 Score=55.27 Aligned_cols=53 Identities=8% Similarity=0.016 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCc-------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCC---------------HHHHHHHH
Q 002660 613 HIFVISVDCDSTT-------------GLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFL 664 (895)
Q Consensus 613 kli~~DiDGTL~~-------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---------------~~~~~~~l 664 (895)
++++||+||||+. ..-+.+.++++.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 4789999999931 1356778999999998 59999999865 24566777
Q ss_pred HhCCC
Q 002660 665 VSGHL 669 (895)
Q Consensus 665 ~~l~l 669 (895)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88877
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.15 Score=61.43 Aligned_cols=140 Identities=15% Similarity=0.132 Sum_probs=98.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHh----c
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK----Y 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~----~ 378 (895)
.+++...++++-|+...|...+ ++..+.++.+....| ..++|.|+...+... ..++++..|+..++. -
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666554443322222 244555544332221 235667777777764 2
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+....-.--..++.+| ||-.+.|. .|..|..-+=+|.-|.+.|+|..|...|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3444 68888776555555666667 99998887 78889888999999999999999999999876 678888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
|-
T Consensus 680 FG 681 (797)
T cd04300 680 FG 681 (797)
T ss_pred eC
Confidence 84
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.026 Score=55.57 Aligned_cols=54 Identities=7% Similarity=0.081 Sum_probs=44.9
Q ss_pred CeEEEEEecCCC-C----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHH
Q 002660 612 KHIFVISVDCDS-T----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIH 661 (895)
Q Consensus 612 ~kli~~DiDGTL-~----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~ 661 (895)
.||++||+|+|| + ...-+.+.++|+.|+++ |+.++|+|+. +...+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~ 77 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAY 77 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHH
Confidence 379999999999 0 12346789999999987 5999999998 888888
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
..++.+++
T Consensus 78 ~~L~~~~l 85 (174)
T TIGR01685 78 EILGTFEI 85 (174)
T ss_pred HHHHhCCc
Confidence 88888887
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.47 E-value=6.8 Score=45.45 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=52.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccC-CCeEEeC--
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLVD-- 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~-~~g~lv~-- 454 (895)
+++.+.+++|+.+ ++... +.++||.- +--.+.+||+.+|+|+|+...-+ ...++.+. +.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEK---VLAHP--SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHH---HhCCC--ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 5667778888754 44332 11566532 33468899999999999976533 12222232 5676662
Q ss_pred -----CCCHHHHHHHHHHHHhCH
Q 002660 455 -----PHDQQSVADALLKLVADK 472 (895)
Q Consensus 455 -----p~d~~~la~ai~~ll~~~ 472 (895)
.-+.++++++|+++++++
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGE 430 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCc
Confidence 125789999999999754
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.12 Score=61.77 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=97.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHhcC---
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD--- 379 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~--- 379 (895)
.+++...++++-|+...|...+ ++..+.++......| ..++|.|+...... ...+.++..|+..++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhcCCh
Confidence 4567788899999999998777 666655443333332 24455544332221 123556677777775542
Q ss_pred -CCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 380 -LYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 380 -l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
..+ +|.|+....-.--..++..| ||-.+.|. .|..|..=+=+|.-|.+.|+|-.|...|+.+. +.||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776655555666777 99999887 78899988999999999999999999998875 678888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 84
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.043 Score=53.52 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=42.2
Q ss_pred CeEEEEEecCCCCcc--------------hhHHHHHHHHHHHhhccCCCeEEEEEcCC---------------CHHHHHH
Q 002660 612 KHIFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 662 (895)
Q Consensus 612 ~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR---------------~~~~~~~ 662 (895)
+|++|||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 478999999999431 225588999999997 5999999864 3456777
Q ss_pred HHHhCCCC
Q 002660 663 FLVSGHLS 670 (895)
Q Consensus 663 ~l~~l~l~ 670 (895)
+++.+|+.
T Consensus 77 ~l~~~gl~ 84 (161)
T TIGR01261 77 IFRSQGII 84 (161)
T ss_pred HHHHCCCc
Confidence 88998883
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.044 Score=54.75 Aligned_cols=42 Identities=5% Similarity=0.024 Sum_probs=33.7
Q ss_pred cCeEEEEEecCCCC------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC
Q 002660 611 RKHIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 611 ~~kli~~DiDGTL~------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
..|+++||.||||. -.+.+.+.++|++|+++ |+.++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 36899999999992 12345678999999987 59999999876
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.046 Score=63.28 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=50.0
Q ss_pred cccCeEEEEEecCCCC--cc-------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCH------------HHHH
Q 002660 609 RRRKHIFVISVDCDST--TG-------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIH 661 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--~~-------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~------------~~~~ 661 (895)
....|++|||+||||. .. ..+.+.+.|++|+++ |+.++|+|--+- ..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~ 240 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIE 240 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHH
Confidence 4567999999999993 11 245678899999988 599999997544 3467
Q ss_pred HHHHhCCCCCCCCCEEEEcC
Q 002660 662 SFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 662 ~~l~~l~l~~~~~d~~I~~n 681 (895)
.+++.++++ ++.++|..
T Consensus 241 ~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 241 AIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHcCCc---eEEEEeCC
Confidence 889999984 57777654
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.43 Score=56.66 Aligned_cols=140 Identities=12% Similarity=0.165 Sum_probs=83.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHHhccccc--CCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc----
Q 002660 309 TNPRKPVILALARPDPKKNITT-LV---KAFGECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll---~A~~~l~~~~--~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~---- 378 (895)
++++...++++-|+...|...+ ++ .-+.++++.. ....+++|+|+...+... ..++++..|+..++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4567788899999999998776 33 4444454321 112344555543322221 2345666666666532
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+...+-.--..++..+ ||-++.|+ .|..|..-+=+|.-|.+.+++..|...|+.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3344 67887776544444555666 99999987 79999999999999999999999999998753 346677
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+-
T Consensus 594 FG 595 (713)
T PF00343_consen 594 FG 595 (713)
T ss_dssp ES
T ss_pred cC
Confidence 63
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.21 Score=59.95 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=97.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHhc----
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~---- 378 (895)
.+++...++++-|+...|...+ ++..+.++......| ..++|.|+...+... ..+.++..|+..++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4577788899999999998777 666655443333332 234555443322221 2355667777776442
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
...+ +|.|+....-.--..++..| ||-.+.|. .|..|..-+=+|.-|.+.|+|..|...|+.+. ..|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2344 68888876655555666777 99998887 78899988999999999999999999999876 678887
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
|-
T Consensus 677 FG 678 (794)
T TIGR02093 677 FG 678 (794)
T ss_pred cC
Confidence 74
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.28 Score=50.68 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=37.8
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 795 g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
+=.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 147 ~Kp~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 147 SKPHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 334567899999999999999998 888887 8 99999999776553
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.094 Score=55.34 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=47.6
Q ss_pred ccCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH--
Q 002660 610 RRKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS-- 658 (895)
Q Consensus 610 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~-- 658 (895)
..+..|+||||+|+. ....+.+.++++.|+++ |+.++|+|+|+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEK 148 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchH
Confidence 345699999999991 11335678899999887 5999999999844
Q ss_pred -HHHHHHHhCCCCCCCCCEEEEc
Q 002660 659 -EIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 659 -~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.....++.+|++....+.++..
T Consensus 149 ~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 149 AATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred HHHHHHHHHcCcCCCCcceEEeC
Confidence 4557888889842122455554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.065 Score=53.25 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=32.4
Q ss_pred eEEEEEecCCCCc-----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCC
Q 002660 613 HIFVISVDCDSTT-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 613 kli~~DiDGTL~~-----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
|++|+|.||||.. ...+.+.++|++|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999941 1235689999999997 59999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.29 Score=57.95 Aligned_cols=55 Identities=7% Similarity=-0.035 Sum_probs=45.6
Q ss_pred ccCeEEEEEecCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
....|.|+-+=|=++ .+.+.++++++.+++. |+.|...||-+...+..+.+++|+
T Consensus 569 ~E~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cccceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 344677777666654 3556889999999998 699999999999999999999997
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.08 Score=52.26 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=44.8
Q ss_pred cCeEEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC-HHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMT-ISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~-~~~~~~~l~~l~l 669 (895)
.-+++++|+||||+ ....+.+.++|+.|+++ |+.++|+|+.+ ...+..+++.+++
T Consensus 24 ~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 45799999999994 24667889999999998 59999999998 5666667777776
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.027 Score=57.10 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=41.1
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCc
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGI 844 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa 844 (895)
.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.+|+++|++..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDE 191 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCC
Confidence 47999999999999999999988 778877 8 9999999999999643
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.27 Score=50.42 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 793 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 793 p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
..+-.|...++++++++|+++++++. +||+.+ | +++-+.+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 34446788999999999999999998 888887 8 999999997654
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.047 Score=53.67 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=58.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC--------chhccccCCCeEEe
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLV 453 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg--------~~eiv~~~~~g~lv 453 (895)
.+|.+.++ .+++.++++.| |++|.- +-+.++.|++++|+|.|.-.... ....+.....|..+
T Consensus 55 ~~v~~~~~--~~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF--VDNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS--SSSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec--hhhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57888888 45799999999 987754 45689999999999998766544 12223333444444
Q ss_pred CCC--CHHHHHHHHHHHHhCHHHHHHHHH
Q 002660 454 DPH--DQQSVADALLKLVADKQLWARCRQ 480 (895)
Q Consensus 454 ~p~--d~~~la~ai~~ll~~~~~~~~~~~ 480 (895)
... +++.+.++|.+++.++.....+.+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~ 153 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAK 153 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHH
Confidence 322 357799999999998876555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.054 Score=58.98 Aligned_cols=56 Identities=4% Similarity=-0.096 Sum_probs=47.2
Q ss_pred ccCeEEEEEecCCCCc---------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 610 RRKHIFVISVDCDSTT---------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~---------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+++++|+|||+.. .+.+.+.++++.|+++ |+.++|+|||+.......++.+++
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 3457999999999931 3567889999999887 599999999999999888888776
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.13 Score=56.58 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=46.8
Q ss_pred cCeEEEEEecCCCC------c--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh----CCC
Q 002660 611 RKHIFVISVDCDST------T--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----GHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL~------~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~----l~l 669 (895)
.+|+|++|+|+||- . ...+.+.++|+.|+++ |+.++|||-.+...+...++. +++
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~ 74 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQ 74 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCc
Confidence 36899999999991 1 2346789999999987 699999999999999999998 766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.27 Score=51.06 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=27.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCCC----HHHHHHHHHhCCC
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSMT----ISEIHSFLVSGHL 669 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR~----~~~~~~~l~~l~l 669 (895)
.+++|+.++++ |+.++++|||+ ...+..+++.+++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 78889999887 69999999996 3355556666888
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.21 Score=47.67 Aligned_cols=57 Identities=5% Similarity=0.019 Sum_probs=50.4
Q ss_pred ccCeEEEEEecCCC----CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 610 RRKHIFVISVDCDS----TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 610 ~~~kli~~DiDGTL----~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.-.|-|++|+|.|| ....+++.++.+..++++ |+.++|.|--+..-+..+.+.++++
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 45678999999999 367788999999999998 5999999999999999999999984
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.19 Score=57.98 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCce
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSD 684 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~ 684 (895)
+...+.+++++++ |+.++|+|+.+...+..+++.+|+ +|.+||.++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 5678888888887 699999999999999999999997 57899987654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.59 Score=51.92 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=35.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
-+...+...++.+|++++++++ +||+.. | ++.=+.+|..++.
T Consensus 273 P~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 3567889999999999999999 788777 8 9999999975544
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.19 Score=48.38 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=44.1
Q ss_pred cCeEEEEEecCCCCc-----------------------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHH
Q 002660 611 RKHIFVISVDCDSTT-----------------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH 661 (895)
Q Consensus 611 ~~kli~~DiDGTL~~-----------------------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~ 661 (895)
+|+++++|+||||.. ..-+.+.+.|+.|+ + ++.++|+|.-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 478999999999910 12456788999997 4 4899999999999999
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99998877
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.47 Score=49.51 Aligned_cols=140 Identities=19% Similarity=0.253 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCC------CCCC
Q 002660 322 PDPKKNITTLVKAFGECRPLRELANLTL---IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK------HHKQ 392 (895)
Q Consensus 322 l~~~Kgi~~ll~A~~~l~~~~~~~~l~l---ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g------~~~~ 392 (895)
.+...|+..++.++..+..... .+++ ++..-+ ..-+..+.++.+|.+.-...+ ++++
T Consensus 237 pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsq 302 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQ 302 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEEEeH
Confidence 5667899999987766642111 1222 222222 244556666666654322111 3446
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHH-HHHcCCCEEEcCCCCch------hccc--cCCCeEEeCCCCHHHHHH
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE-AAAHGLPIVATKNGGPV------DIHR--VLDNGLLVDPHDQQSVAD 463 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E-a~a~G~PVvas~~gg~~------eiv~--~~~~g~lv~p~d~~~la~ 463 (895)
....+.+..| |+.+ +|.-+..| ++..|+|||+..--|+. +--. -+..-.+++|. .+-++
T Consensus 303 qsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~--aq~a~ 370 (412)
T COG4370 303 QSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE--AQAAA 370 (412)
T ss_pred HHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc--hhhHH
Confidence 6788899998 7754 45445544 67789999998754442 2100 02233566643 34455
Q ss_pred HHHH-HHhCHHHHHHHHHHHHHHhh
Q 002660 464 ALLK-LVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 464 ai~~-ll~~~~~~~~~~~~~~~~~~ 487 (895)
.+.+ ++.|++....++.++++++-
T Consensus 371 ~~~q~ll~dp~r~~air~nGqrRiG 395 (412)
T COG4370 371 QAVQELLGDPQRLTAIRHNGQRRIG 395 (412)
T ss_pred HHHHHHhcChHHHHHHHhcchhhcc
Confidence 5544 99999999999999999983
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.21 Score=51.65 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc---eEEEecC
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH---KTVILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag---~gVaMgN 843 (895)
.-..+..+++.+|+++++++. +||+.+ | +.|=+.|| .||..|.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECCC
Confidence 457888999999999767777 999988 9 99999999 5566664
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.47 Score=56.16 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=92.1
Q ss_pred chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhHH
Q 002660 626 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHS 705 (895)
Q Consensus 626 ~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~~ 705 (895)
.+...+-+++.+.+.. |++++..||+.+..+..+.+..|+ |..+ +++..
T Consensus 590 PPR~~vP~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~~~-~et~e------------------ 638 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------ISEG-SETVE------------------ 638 (1019)
T ss_pred CCcccCchhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ecCC-chhhh------------------
Confidence 3445677888888888 599999999999999999888774 2222 22110
Q ss_pred HhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecC
Q 002660 706 HIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 785 (895)
Q Consensus 706 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~ 785 (895)
.+..+......+.. ....+........-..-.-+++.+.+..+ ...-+.++.+
T Consensus 639 ------------~~a~r~~~~v~~vn--------------~~~a~a~VihG~eL~~~~~~qld~il~nh-~eIVFARTSP 691 (1019)
T KOG0203|consen 639 ------------DIAKRLNIPVEQVN--------------SRDAKAAVIHGSELPDMSSEQLDELLQNH-QEIVFARTSP 691 (1019)
T ss_pred ------------hhHHhcCCcccccC--------------ccccceEEEecccccccCHHHHHHHHHhC-CceEEEecCc
Confidence 01111110000000 00111111111111111234666666543 2344445555
Q ss_pred CeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCc
Q 002660 786 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMP 865 (895)
Q Consensus 786 ~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~ 865 (895)
..-+=|+ .+ |+++| ++++.-||+-| | -+-|+.|++|||||=|- .++-++|.+ +.=
T Consensus 692 qQKLiIV-e~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGiaG--SDvsKqAAD------mIL 746 (1019)
T KOG0203|consen 692 QQKLIIV-EG----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIAG--SDVSKQAAD------MIL 746 (1019)
T ss_pred cceEEeE-hh----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeecccc--chHHHhhcc------eEE
Confidence 4223332 22 45554 48888999999 9 99999999999999876 555555544 333
Q ss_pred CCCCceEEc
Q 002660 866 IDSPNIVQT 874 (895)
Q Consensus 866 ~~~~~~~~v 874 (895)
+|...|..|
T Consensus 747 LDDNFASIV 755 (1019)
T KOG0203|consen 747 LDDNFASIV 755 (1019)
T ss_pred ecCcchhhe
Confidence 445555555
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.17 Score=55.80 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=42.7
Q ss_pred cCeEEEEEecCCCCc--------------chhHHHHHHHHHHHhhccCCCeEEEEEcCC---------------CHHHHH
Q 002660 611 RKHIFVISVDCDSTT--------------GLLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIH 661 (895)
Q Consensus 611 ~~kli~~DiDGTL~~--------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR---------------~~~~~~ 661 (895)
++|++|||.||||.. .+-+.+.++|+.|+++ |+.++|+|.- +...+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~ 76 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMM 76 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHH
Confidence 368999999999932 2345688999999887 5999999983 344566
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
.+++.+++
T Consensus 77 ~iL~~~gl 84 (354)
T PRK05446 77 QIFESQGI 84 (354)
T ss_pred HHHHHcCC
Confidence 78888887
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.13 E-value=21 Score=41.53 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=49.6
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh-----ccccCCCeEEeC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRVLDNGLLVD 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e-----iv~~~~~g~lv~ 454 (895)
..+.+.+++|+. .++... ++ ||. -+-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 344 ~g~~v~~w~pq~---~iL~h~----~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQV---LILSHP----AIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHH---HHhcCC----ccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 357778998875 456555 44 542 234468899999999999976533221 111222333321
Q ss_pred ---------------CCCHHHHHHHHHHHHh
Q 002660 455 ---------------PHDQQSVADALLKLVA 470 (895)
Q Consensus 455 ---------------p~d~~~la~ai~~ll~ 470 (895)
--+.+++++++++++.
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhc
Confidence 1257899999999996
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.23 Score=53.57 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 799 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 799 g~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
...+..+++++|++++++++ +||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 55889999999999999999 778777 8 99999999776554
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.07 E-value=2.2 Score=47.09 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=53.2
Q ss_pred CcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 313 KPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 313 ~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.+.-|.-. -.+-++.+++++.++.+. . +.+++...+.. +.+.....+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~--~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK--E--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc--C--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec--
Confidence 34444545422 224556778999888632 2 33433322221 2233333322 1233332
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
+..++|+.| |+++.. .|.+.+|++.+|+|.|..-
T Consensus 228 ---~~~~~m~~a----Dlal~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ---DTHKALLEA----EFAFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred ---cHHHHHHhh----hHHHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 567899999 998877 4777789999999999843
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.18 Score=49.85 Aligned_cols=54 Identities=15% Similarity=0.011 Sum_probs=39.9
Q ss_pred CeEEEEEecCCCCc----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH--------HHHHHHHhCCC
Q 002660 612 KHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS--------EIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL~~----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--------~~~~~l~~l~l 669 (895)
-|+|++|.||||.. .+-+.++++|++|+++ |+.++|+|+-+.. .+...++.+++
T Consensus 4 ~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 57999999999921 2347789999999997 5999999986531 23344666666
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.13 Score=52.24 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=40.5
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccC
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 856 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~ 856 (895)
..-.|...++.+. ..|. ++++ +||+.| | ++|++.||.+|||. ..+.+++.+++
T Consensus 129 ~~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~---ak~~~~~~~~~ 181 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH---APENVIREFPQ 181 (203)
T ss_pred CcchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec---CCHHHHHhCCC
Confidence 3457999999884 5564 5777 788888 8 99999999999997 23556666665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.12 Score=48.87 Aligned_cols=121 Identities=23% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCC-CCCcc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFG-PKDKY 105 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~-~~~~~ 105 (895)
.++|...-...|+++|+++| |+|.+.|.... ....+ ..|+.++.++.. +....
T Consensus 7 Gt~Ghv~P~lala~~L~~rG--h~V~~~~~~~~--------~~~v~----------------~~Gl~~~~~~~~~~~~~~ 60 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRRG--HEVRLATPPDF--------RERVE----------------AAGLEFVPIPGDSRLPRS 60 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHTT---EEEEEETGGG--------HHHHH----------------HTT-EEEESSSCGGGGHH
T ss_pred CChhHHHHHHHHHHHHhccC--CeEEEeecccc--------eeccc----------------ccCceEEEecCCcCcCcc
Confidence 47799999999999999999 99999887421 11111 238888888765 21110
Q ss_pred c-ccccCCCChHH--HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCC
Q 002660 106 I-AKELLWPHIPE--FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSL 177 (895)
Q Consensus 106 ~-~~~~~~~~l~~--f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~ 177 (895)
. ....+...... ....+...+........ +.......+|++.++. ....+..++.++++|.+.+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 61 LEPLANLRRLARLIRGLEEAMRILARFRPDLV--VAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC--CHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred cchhhhhhhHHHHhhhhhHHHHHhhccCcchh--hhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 0 11111111100 11111111211111100 0111123466655443 34566778899999999877654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.17 Score=53.76 Aligned_cols=34 Identities=6% Similarity=0.094 Sum_probs=21.0
Q ss_pred CeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 646 SIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 646 g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
|+.++|+|+.+...+...++.+++. ..+|.++++
T Consensus 125 g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 125 EIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 4677777777777676677766663 234555543
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.34 Score=49.00 Aligned_cols=34 Identities=0% Similarity=-0.023 Sum_probs=27.5
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.++|+.|+++ |+.++|+||.....+..+++.+|+
T Consensus 86 ~e~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 86 EELVRWLKEK----GLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred HHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHhCC
Confidence 3345556665 699999999999999999999987
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.29 Score=50.50 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
..|..+++ +++.+.+++++ +||+.+ | +.|.+.||..+|
T Consensus 147 ~~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred CchHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 34776654 45777788888 788887 8 999999998666
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.24 Score=54.35 Aligned_cols=53 Identities=8% Similarity=0.074 Sum_probs=40.8
Q ss_pred EEEEEecCCC--CcchhHHHHHHHHHHHhh----ccCCCeEEEEE---cCCCHHHHHHHH-HhCCCC
Q 002660 614 IFVISVDCDS--TTGLLDATKKICEAVEKE----RTEGSIGFILS---TSMTISEIHSFL-VSGHLS 670 (895)
Q Consensus 614 li~~DiDGTL--~~~~~~~~~~~l~~l~~~----g~~~g~~v~ia---TGR~~~~~~~~l-~~l~l~ 670 (895)
.++||+|||| .....+...++++.|+.+ | +.+++. +|++.....+.+ +.+|++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g----~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLK----IPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccC----CCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 4789999999 466788899999999885 4 444444 588888866665 888885
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.47 Score=49.65 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=41.2
Q ss_pred CeEEEEEecCCCC------------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---
Q 002660 612 KHIFVISVDCDST------------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 658 (895)
Q Consensus 612 ~kli~~DiDGTL~------------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--- 658 (895)
+-+++||||+|+. ....+.+.++.+.++++ |+.|++.|||+-.
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 4689999999981 01245677888888887 5999999999843
Q ss_pred HHHHHHHhCCCC
Q 002660 659 EIHSFLVSGHLS 670 (895)
Q Consensus 659 ~~~~~l~~l~l~ 670 (895)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 345677888883
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=92.03 E-value=0.43 Score=56.10 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=54.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p~- 456 (895)
.++.+..++|+. ++++.. +.++|| + -|--.++.||+.+|+|+|+-..-| ....++..+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~---~lL~hp--~v~~fi-t---HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQN---DLLAHP--RVKLFI-T---HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HH---HHHTST--TEEEEE-E---S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccch---hhhhcc--cceeee-e---ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 578888999875 456544 113444 2 244578999999999999976533 23344455678877654
Q ss_pred -CHHHHHHHHHHHHhCHHHHHH
Q 002660 457 -DQQSVADALLKLVADKQLWAR 477 (895)
Q Consensus 457 -d~~~la~ai~~ll~~~~~~~~ 477 (895)
+.+++.++|.++++|++-.+.
T Consensus 394 ~~~~~l~~ai~~vl~~~~y~~~ 415 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSYKEN 415 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhHHHHH
Confidence 468899999999999864433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=92.00 E-value=1.4 Score=49.35 Aligned_cols=110 Identities=11% Similarity=0.167 Sum_probs=63.2
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc--CC-------CCchhccccCCC
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT--KN-------GGPVDIHRVLDN 449 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas--~~-------gg~~eiv~~~~~ 449 (895)
...++|.+... ..++.+++..| |++|- -++-++.|++.+++|||-- +. |...++ .+...
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467777655 45899999999 99762 3677999999999999953 22 222232 22234
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 450 GLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
|-.+. +.+++.++|..++++++..++..+...+..-.|.=.+.++++.+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 55664 8899999999998877655444444444442344445566665544
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.13 Score=50.08 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=36.0
Q ss_pred eEEEEEecCCC--C-------------cchhHHHHHHHHHHHhhccCCCeEEEEEc-----CC--CH-------HHHHHH
Q 002660 613 HIFVISVDCDS--T-------------TGLLDATKKICEAVEKERTEGSIGFILST-----SM--TI-------SEIHSF 663 (895)
Q Consensus 613 kli~~DiDGTL--~-------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaT-----GR--~~-------~~~~~~ 663 (895)
|+++||+|||| + .-..+.+.++|+++.++ |..+||+| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 68999999999 1 01234688889999887 59999988 66 11 223456
Q ss_pred HHhCCC
Q 002660 664 LVSGHL 669 (895)
Q Consensus 664 l~~l~l 669 (895)
++.+++
T Consensus 77 l~~l~i 82 (159)
T PF08645_consen 77 LKELGI 82 (159)
T ss_dssp HHHCTS
T ss_pred HHHcCC
Confidence 777777
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.088 Score=52.14 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=36.2
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
..+.+.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999988 777777 8 9999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=91.58 E-value=26 Score=38.94 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=61.7
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
++.+++..|.-.+.|... ...+.++.+.+ ....+ +++|+..+.+ .+...++ .+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e------~~~~~~i---~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD------LACVNEI---AQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH------HHHHHHH---HHhcCCCccccccCC
Confidence 355667777766677654 55666666632 23344 3444432110 1111222 222222334667888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
.+-.++.++++.| +++|-. |+ -.+-=|.|.|+|+|+-.
T Consensus 251 ~sL~el~ali~~a----~l~v~n---DS--Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGV---DS--APAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC--HHHHHHHHcCCCEEEEE
Confidence 8889999999999 999865 33 34455778899999854
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=91.56 E-value=12 Score=39.12 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCcEE---EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CccccccchHHHHHHHHHH-----------HH
Q 002660 312 RKPVI---LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLSVLKL-----------ID 376 (895)
Q Consensus 312 ~~~~i---l~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~-~~~~~~~~~~~~~~~l~~~-----------~~ 376 (895)
.++.. +|+||..-.||+..+++.-+... .+ +++.-++-+-+ ... .-.+... +.
T Consensus 179 se~nmnv~~yigR~Tt~kG~~~mfD~h~~~l--K~-~~~~t~~~GierS~A---------~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 179 SEKNMNVNRYIGRQTTWKGPRRMFDLHEKIL--KP-AGFKTIMEGIERSPA---------KISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp GGSEEEEEEEE--SSGGG-HHHHHHHHHHTT--TT-TT-EEEEE---SSTH---------HHHHHHTT--EEEE-CTGGG
T ss_pred HhhhcccceeeeeeeeecCcHHHhhhHHHhc--CC-cchhHHhhhhhcCCc---------eeeeecCCcccccCcccccc
Confidence 34444 89999999999999999998874 33 56654443221 110 0111111 11
Q ss_pred hcCCC--CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCchHHHHHHHcCC-CEEEcCCCCch------
Q 002660 377 KYDLY--GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGL-PIVATKNGGPV------ 441 (895)
Q Consensus 377 ~~~l~--~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Eg~gl~~~Ea~a~G~-PVvas~~gg~~------ 441 (895)
...+. ..+.++|..=.+|..+.++.+ .+.+.-+. .+.|-.+-+|..|||. ||.-...|...
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 11222 236677776678888888887 44443332 3457889999999997 55544443322
Q ss_pred -hccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 442 -DIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 442 -eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
-++......+.++-.|.++-.+.|.++..+.
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHHHT-H
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHHhccC
Confidence 2333445678889999999999888876553
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.83 Score=47.69 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=49.7
Q ss_pred ccCeEEEEEecCCC-Cc-----chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 610 RRKHIFVISVDCDS-TT-----GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 610 ~~~kli~~DiDGTL-~~-----~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
....+|+||+|-|| +. -..+.+.+.+..|++.| -+.+..++|- ..-+..-++++++. ..+|.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g---~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQG---CVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcC---CEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 35569999999999 21 13477889999999984 4666666675 45667788888886 5678888854
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=90.49 E-value=30 Score=37.79 Aligned_cols=110 Identities=16% Similarity=0.278 Sum_probs=82.4
Q ss_pred HHHHHHHHhcCC--CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc
Q 002660 369 LSVLKLIDKYDL--YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 446 (895)
Q Consensus 369 ~~l~~~~~~~~l--~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~ 446 (895)
......+..+++ .++..|.|.+ +++.++..-. |++|.--+--+.|..-+|++--|=|.|-.. .++.
T Consensus 238 ~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~- 305 (364)
T PF10933_consen 238 PTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK- 305 (364)
T ss_pred HHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc-
Confidence 344455566665 4567788874 6677777653 998877777789999999999999999642 2232
Q ss_pred CCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCH
Q 002660 447 LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSW 491 (895)
Q Consensus 447 ~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~ 491 (895)
+.|+..+..|..+=+++|.+++. ....++..++.+++.+.+++.
T Consensus 306 -d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p 350 (364)
T PF10933_consen 306 -DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSP 350 (364)
T ss_pred -ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCC
Confidence 36999999999999999999987 556688888888888865444
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=90.49 E-value=2.1 Score=43.91 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCC-CCCccccccCcceE-EEecC
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESG-DTDYEGLLGGVHKT-VILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~n-n~D~~eMl~~ag~g-VaMgN 843 (895)
+....+.+++++|+++++++. +||+. + | +.+=+.+|.. |.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWINQ 196 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEECC
Confidence 456789999999999999988 77775 5 6 9999999964 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.39 Score=47.41 Aligned_cols=36 Identities=3% Similarity=-0.009 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+.++.++++ |+.++|+||.....+.++++.+++
T Consensus 77 g~~~~l~~l~~~----g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 77 GARELISWLKER----GIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCC
Confidence 455666666666 699999999999999999999988
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.47 E-value=2.9 Score=43.95 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
-+...+.+.++++|+++++++. +||+.. | +..=+.+|+-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 4457789999999999999999 888777 8 998889997654
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.35 Score=49.94 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+.++++.|+++ |+.++++|+.+...+...++.+|+.
T Consensus 90 Gv~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl~ 126 (221)
T COG0637 90 GVVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGLL 126 (221)
T ss_pred cHHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccCh
Confidence 345666777776 4888888888888888888888874
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=90.30 E-value=0.37 Score=48.32 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+.+.+.++.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 4566888888887 5999999999999999999999983
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.48 Score=48.19 Aligned_cols=37 Identities=0% Similarity=0.016 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+...++++.++++ + .++|+||-....+.++++.+|++
T Consensus 71 pga~ell~~lk~~----~-~~~IVS~~~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 71 EGAVEFVDWLRER----F-QVVILSDTFYEFSQPLMRQLGFP 107 (203)
T ss_pred ccHHHHHHHHHhC----C-eEEEEeCChHHHHHHHHHHcCCc
Confidence 3455667777764 3 89999999999999999999983
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.42 Score=46.71 Aligned_cols=54 Identities=11% Similarity=0.172 Sum_probs=36.2
Q ss_pred CeEEEEEecCCC------C-----------c-----------chhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHHH
Q 002660 612 KHIFVISVDCDS------T-----------T-----------GLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 662 (895)
Q Consensus 612 ~kli~~DiDGTL------~-----------~-----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~~ 662 (895)
.|||+||+|.|| + . ..-+.+..+|+.|+++ |+.+++||=- .+.-+++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHH
Confidence 479999999999 1 0 1235678899999997 6999999954 4567889
Q ss_pred HHHhCCC
Q 002660 663 FLVSGHL 669 (895)
Q Consensus 663 ~l~~l~l 669 (895)
.|+.+++
T Consensus 79 ~L~~l~i 85 (169)
T PF12689_consen 79 LLKLLEI 85 (169)
T ss_dssp HHHHTT-
T ss_pred HHHhcCC
Confidence 9999887
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=89.67 E-value=2.9 Score=42.09 Aligned_cols=41 Identities=15% Similarity=0.036 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
+....+.+++++|+++++++. +||+.. | +..=+.+|...+.
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~-vgD~~~-D-i~~A~~~G~~~i~ 190 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLF-VASNPW-D-LGGAKKFGFKTAW 190 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEE-EeCCHH-H-HHHHHHCCCcEEE
Confidence 366789999999999999988 777766 7 9988888876554
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=0.78 Score=46.59 Aligned_cols=40 Identities=20% Similarity=0.372 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
.|..+++.+ +...+++++ +||+.+ | ++|.+.+|.||+.+.
T Consensus 132 ~k~~~l~~~----~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 132 GKRQAVKAL----KSLGYRVIA-AGDSYN-D-TTMLGEADAGILFRP 171 (205)
T ss_pred hHHHHHHHH----HHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEECC
Confidence 355555543 333467777 777777 8 999999999998653
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.98 E-value=0.26 Score=51.14 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=41.4
Q ss_pred cCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---
Q 002660 611 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 658 (895)
Q Consensus 611 ~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--- 658 (895)
.+..|+||||+|+. ....+.+.++++.++++ |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 46689999999981 12334577999999998 5999999999754
Q ss_pred HHHHHHHhCCC
Q 002660 659 EIHSFLVSGHL 669 (895)
Q Consensus 659 ~~~~~l~~l~l 669 (895)
.....|...|+
T Consensus 147 ~T~~nL~~~G~ 157 (229)
T PF03767_consen 147 ATEKNLKKAGF 157 (229)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 44556777777
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=88.93 E-value=1.5 Score=48.81 Aligned_cols=55 Identities=9% Similarity=0.153 Sum_probs=45.8
Q ss_pred cccCeEEEEEecCCCC-------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhC
Q 002660 609 RRRKHIFVISVDCDST-------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG 667 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l 667 (895)
...+|.+++|+|+||- +..-...++.+..|+++ |+.++|||=.....+.+.+...
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhC
Confidence 5678999999999991 23456788889999998 5999999999999998887764
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.73 Score=51.85 Aligned_cols=45 Identities=7% Similarity=0.222 Sum_probs=32.9
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEEcC
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNS 681 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~n 681 (895)
.++|+.|+++ |+.++|+|+.+...+...++ ..++. ..+|.++|+.
T Consensus 99 ~elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 99 NRLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred HHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 3466667666 69999999999988888876 56764 3467777753
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=88.63 E-value=1.3 Score=43.23 Aligned_cols=60 Identities=7% Similarity=0.063 Sum_probs=46.2
Q ss_pred cccCeEEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCC-------CHHHHHHHHHhCCCC
Q 002660 609 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSM-------TISEIHSFLVSGHLS 670 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-------~~~~~~~~l~~l~l~ 670 (895)
..-.|.|+||.|.||+ ..+++...+.++++++.+ +.-.|+|+|=- ....+..+-+.+|++
T Consensus 38 ~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~--~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQF--GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHC--CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 4457899999999994 678899999999999985 22256666654 367777788888883
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=88.20 E-value=0.86 Score=44.25 Aligned_cols=52 Identities=15% Similarity=0.129 Sum_probs=39.0
Q ss_pred eEEEEEecCCCC----cc------------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDST----TG------------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL~----~~------------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
|+|++|+||||. .. .-+.+.+.|+.+.+. ..++|.|..+..-+.++++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-----~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-----YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-----CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-----ceEEEEEeehhhhhhHHHHhhhh
Confidence 689999999991 11 346788999998765 88999999999999999888763
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=87.59 E-value=1.1 Score=44.97 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=35.1
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 838 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g 838 (895)
.|....|..=++++++++|+++++++. +||... . ++--+..|+-
T Consensus 157 KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ 200 (219)
T PTZ00445 157 APMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYI 200 (219)
T ss_pred CCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCE
Confidence 455567888899999999999999977 888654 4 8888877753
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.39 E-value=11 Score=43.72 Aligned_cols=168 Identities=12% Similarity=0.123 Sum_probs=88.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--ccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDG--IDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
+..+.++.|... ..+-+..+..+++.+. . .+..++.+... .+.+. + ...++. .++..+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 456777888754 2334666677777653 1 34345543211 00111 1 111122 2455666
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhc-cccCCCeEEeC--------
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDI-HRVLDNGLLVD-------- 454 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~ei-v~~~~~g~lv~-------- 454 (895)
++.|+.++ ++..+ .+.||.= -|+ ++.+||+.+|+|+|+-...+- ..+ +...+.|+-+.
T Consensus 338 ~W~PQ~~I---L~H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEI---LAHKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHH---hcccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 89888764 44431 1345522 233 477999999999999765432 222 22234565331
Q ss_pred -CCCHHHHHHHHHHHHh--CHHH---HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 455 -PHDQQSVADALLKLVA--DKQL---WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 455 -p~d~~~la~ai~~ll~--~~~~---~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
.-+.+++.++|++++. +++. .+++++.+++.+ +-=|.....+++++.+..+
T Consensus 409 ~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 409 EIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred CcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 1267899999999996 2222 223344444444 2223444455666655543
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.33 E-value=13 Score=43.11 Aligned_cols=182 Identities=13% Similarity=0.118 Sum_probs=121.0
Q ss_pred hhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC-c
Q 002660 305 MRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG-Q 383 (895)
Q Consensus 305 ~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~-~ 383 (895)
...+.+.+..++.....+. |=-+..++.+..+.+ .-|+-+|++=.-|--. ..++...+...|+.+ +
T Consensus 751 ~~y~Lp~d~vvf~~FNqLy--KidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~r 817 (966)
T KOG4626|consen 751 SQYGLPEDAVVFCNFNQLY--KIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDR 817 (966)
T ss_pred CCCCCCCCeEEEeechhhh--cCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccc
Confidence 3455566666666666653 333456666665543 3344333331111111 156778889999976 5
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-------CCCchhccccCCCeEEeCCC
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-------NGGPVDIHRVLDNGLLVDPH 456 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-------~gg~~eiv~~~~~g~lv~p~ 456 (895)
|.|..-...+|-..-++.| ||.+-|++.-|- .+-.|.+.+|+|+|.-. +++ .++..-+.|-++ ..
T Consensus 818 iifs~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~--Sll~~~Gl~hli-ak 889 (966)
T KOG4626|consen 818 IIFSPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAA--SLLTALGLGHLI-AK 889 (966)
T ss_pred eeeccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHH--HHHHHcccHHHH-hh
Confidence 8888888888888999999 999988765443 34578899999998743 222 122222344444 24
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcccC
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~~~ 507 (895)
+.++..+.-.++-+|.+..+.++..-+... . -|+-.+++..+.+.|.+.-+
T Consensus 890 ~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~ 943 (966)
T KOG4626|consen 890 NREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK 943 (966)
T ss_pred hHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence 778888888888888888888888877766 3 79999999999999987643
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=84.98 E-value=6.2 Score=50.94 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=37.4
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+.+++++|++. |+++.+.||-....+..+....++
T Consensus 725 D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 57788999999999998 599999999999999999998887
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=84.35 E-value=6.3 Score=39.40 Aligned_cols=73 Identities=8% Similarity=0.074 Sum_probs=31.9
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||++.......-.-....+++.|+|++..-=-+....+ ..|+.+..+ .+..++..|.|.+.
T Consensus 94 ~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aq 156 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQ 156 (186)
T ss_dssp H--SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEES
T ss_pred hCCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEEC
Confidence 5699888776533333345667789997663322211110 011112222 34468999999999
Q ss_pred ChHHHHHHHh
Q 002660 223 TRQEIEEQWR 232 (895)
Q Consensus 223 s~~~~~~~~~ 232 (895)
|+...+.+..
T Consensus 157 s~~da~r~~~ 166 (186)
T PF04413_consen 157 SEADAERFRK 166 (186)
T ss_dssp SHHHHHHHHT
T ss_pred CHHHHHHHHH
Confidence 9998887644
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.34 E-value=2.3 Score=38.78 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=46.6
Q ss_pred eEEEEEecCCC-C--------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH
Q 002660 613 HIFVISVDCDS-T--------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLV 665 (895)
Q Consensus 613 kli~~DiDGTL-~--------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~ 665 (895)
++|+||.|||| + -..-+..++.+++++.. |..+..+|=.-..-+.+.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warns----G~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNS----GYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhC----CcEEEEeecCchHHHHHHHH
Confidence 47899999999 0 01345788999998887 59999999999998889999
Q ss_pred hCCCCCCCCCEEE
Q 002660 666 SGHLSPSDFDAFI 678 (895)
Q Consensus 666 ~l~l~~~~~d~~I 678 (895)
.+++. ..++++|
T Consensus 77 al~~~-~yFhy~V 88 (164)
T COG4996 77 ALDLL-QYFHYIV 88 (164)
T ss_pred Hhchh-hhEEEEE
Confidence 98874 2344443
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=83.89 E-value=2 Score=43.12 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=45.0
Q ss_pred cccCeEEEEEecCCCCc----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 609 RRRKHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+..||++++|+|+||-+ -.-+-+.+.|+.+.+. ..++|=|-.+..-+...+.++++
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~-----feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED-----YDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhC-----CEEEEEecCCHHHHHHHHHHhcc
Confidence 56779999999999931 1235678888888885 78889998888889999998875
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.48 E-value=1.7 Score=50.21 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=50.1
Q ss_pred cCeEEEEEecCCCC--------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHH---HHHHHhCCCCCCC
Q 002660 611 RKHIFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEI---HSFLVSGHLSPSD 673 (895)
Q Consensus 611 ~~kli~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~---~~~l~~l~l~~~~ 673 (895)
..|+|+.|||||.| .-.+..+.++..+++++ |.+++.+|.|+...+ +.+|+.+.-
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N----GYk~lyLSARaIgQA~~TR~yL~nv~Q---- 600 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN----GYKILYLSARAIGQADSTRQYLKNVEQ---- 600 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC----CeeEEEEehhhhhhhHHHHHHHHHHhh----
Confidence 57899999999994 12456788888999998 599999999988765 456665432
Q ss_pred CCEEEEcCCceEeec
Q 002660 674 FDAFICNSGSDLYYS 688 (895)
Q Consensus 674 ~d~~I~~nGa~I~~~ 688 (895)
|+.+.-.|-.|..+
T Consensus 601 -dG~~LPdGPViLSP 614 (738)
T KOG2116|consen 601 -DGKKLPDGPVILSP 614 (738)
T ss_pred -cCccCCCCCEEeCC
Confidence 34445556665544
|
|
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.28 E-value=62 Score=34.62 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=71.8
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.-|-.+.+..|.+.|.++| |+|-|++-.++.|....+ .++. ...+......+|+.+..+|....-..
T Consensus 60 PGaGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGs------iLGD---RiRM~~~~~~~~vFiRs~~srG~lGG- 127 (323)
T COG1703 60 PGAGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGS------ILGD---RIRMQRLAVDPGVFIRSSPSRGTLGG- 127 (323)
T ss_pred CCCchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCcc------cccc---HhhHHhhccCCCeEEeecCCCccchh-
Confidence 34466778999999999999 999999876554432111 1111 00112333456887777776432111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhh
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDK 181 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~ 181 (895)
+.+-...++..+.. ..+|+|.....-.|..-.-+...-.+-++++..+.+.+.
T Consensus 128 --------lS~at~~~i~~ldA--------------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 128 --------LSRATREAIKLLDA--------------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred --------hhHHHHHHHHHHHh--------------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 11112222222221 569999998775555555666666888888998887644
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.22 E-value=7.5 Score=45.41 Aligned_cols=39 Identities=18% Similarity=0.417 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|+.-++.|-++-|- .+ |++||++| | .+|+++|..||-.
T Consensus 768 QKA~v~~llq~~t~k---rv-c~IGDGGN-D-VsMIq~A~~GiGI 806 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK---RV-CAIGDGGN-D-VSMIQAADVGIGI 806 (1051)
T ss_pred HHHHHHHHHHHhhCc---eE-EEEcCCCc-c-chheeecccceee
Confidence 699999999888873 35 44999999 9 9999998877744
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=82.86 E-value=5.2 Score=39.32 Aligned_cols=30 Identities=13% Similarity=0.142 Sum_probs=24.8
Q ss_pred CCCcEEEeccccchhHHHHHhccC------CCCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGAL------NVPMLF 172 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~------~ip~v~ 172 (895)
.+||+|.++.+..+.....+++.+ |.++|+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEE
Confidence 689999999997777777777777 888765
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=82.82 E-value=8.7 Score=49.52 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=36.9
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+.++++.|++. |+++.+.||=....+..+..+.++
T Consensus 630 D~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 45667889999999998 599999999999999999999887
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=81.06 E-value=1.8 Score=35.93 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCcccEEEEecCC-CCCCccccccCcce-EEEecCcc
Q 002660 800 QALRYLYLRWGVELSKMVVFVGES-GDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 800 ~al~~L~~~~gi~~~~viaf~Gd~-nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
..+...+++++++++++++ +||+ .. | +.+=+.+|. +|.+..+.
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~-D-i~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLET-D-IEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTT-H-HHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHh-H-HHHHHHcCCcEEEECCCC
Confidence 4567888999999999999 7777 65 8 999999985 66666655
|
... |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=81.06 E-value=4.1 Score=44.38 Aligned_cols=197 Identities=14% Similarity=0.178 Sum_probs=95.9
Q ss_pred cCeEEEEEecCCC--C----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh----------C-CCCCCC
Q 002660 611 RKHIFVISVDCDS--T----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----------G-HLSPSD 673 (895)
Q Consensus 611 ~~kli~~DiDGTL--~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~----------l-~l~~~~ 673 (895)
.=||+-||=|+|| + ....+.+...++-|+. |+.|+|+|.=.+.++.++-+. . .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~-----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRR-----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhc-----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 4579999999999 2 2344555555555444 599999998776665544333 2 332100
Q ss_pred CCEEEEcCCc--eEeeccCC-CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCc-ccccccccCCce
Q 002660 674 FDAFICNSGS--DLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEK-VLTPAEQLSTNY 749 (895)
Q Consensus 674 ~d~~I~~nGa--~I~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 749 (895)
-..++-..|- +....... ........+..|...-...|..+.+..++...............-+ .+. ....
T Consensus 221 k~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~Ii-----RK~R 295 (408)
T PF06437_consen 221 KSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATII-----RKER 295 (408)
T ss_pred hcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEE-----eecc
Confidence 0123332332 22211111 1223444566787666677887777777643322111110000000 000 0000
Q ss_pred EEEEEeeCCCC---CccHHHH----HHHHHhc--cCeEEEEEecCC--eeEEeecCCCChHHHHHHHHHHh----CCCcc
Q 002660 750 CYAFSVQKPGM---TPPVKEL----RKVLRIQ--ALRCHVIYCQNG--SRINVIPVLASRSQALRYLYLRW----GVELS 814 (895)
Q Consensus 750 k~~~~~~~~~~---~~~~~~l----~~~l~~~--~~~~~~~~s~~~--~~lEI~p~g~sKg~al~~L~~~~----gi~~~ 814 (895)
.+-.. ..+.. -+.++|+ +..+... +.++.+..-.++ -++|| .+|.-|++.|.+++ +|.++
T Consensus 296 AVGiv-P~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~ 370 (408)
T PF06437_consen 296 AVGIV-PKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPS 370 (408)
T ss_pred eeeEe-cCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCcc
Confidence 01111 01110 1112222 2333322 112333332332 15665 58999999999999 99999
Q ss_pred cEEEEecCC
Q 002660 815 KMVVFVGES 823 (895)
Q Consensus 815 ~viaf~Gd~ 823 (895)
+++= +||.
T Consensus 371 ~tLH-VGDQ 378 (408)
T PF06437_consen 371 ETLH-VGDQ 378 (408)
T ss_pred ceee-ehhh
Confidence 9998 7774
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 895 | ||||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 1e-42 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 8e-28 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 1e-26 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 6e-10 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 7e-10 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 1e-05 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 1e-05 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 3e-05 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-04 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 1e-04 |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 895 | |||
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-173 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 1e-147 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-89 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 1e-33 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 2e-32 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 2e-28 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 6e-28 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 8e-28 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 3e-26 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 4e-23 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 3e-19 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 1e-16 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 4e-06 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 5e-06 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 2e-05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 1e-04 |
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 510 bits (1315), Expect = e-173
Identities = 151/544 (27%), Positives = 235/544 (43%), Gaps = 72/544 (13%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 69
+ G + D GGQ+ YV E++ AL M +VD++TR++ + GE
Sbjct: 14 NPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDENWPEFSGE 71
Query: 70 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 129
D E++ I+RIPFG DK++ KE LWP++ E+V+ +N
Sbjct: 72 I-------------DYYQETNKVRIVRIPFGG-DKFLPKEELWPYLHEYVNKIINFYREE 117
Query: 130 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 189
+P + HY D G + LL +P FTGHSLG K+E+L
Sbjct: 118 ------------GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNT 165
Query: 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR--LYDGFDPVLERKLRA 247
+ E++ +K RRI AE L++ ++ +I ST QE Q+ LY G V +
Sbjct: 166 S-NFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDD---- 220
Query: 248 RIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRF 307
+ ++IPPG+ + GD I + R
Sbjct: 221 -------------DKFSVIPPGVNTRVFDGEYGD-------------KIKAKITKYLERD 254
Query: 308 FTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG----IDEMS 361
+ R P I+A +R D KKN LV+A+ + + L++ ANL L + +
Sbjct: 255 LGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAG 314
Query: 362 STSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLT 421
+L +++LID D G+V+ + Q ++ Y A VF +F EPFGL
Sbjct: 315 QEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLA 374
Query: 422 LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481
+EA A GLP V T+NGGP +I G+LVDP D + +A LLK ++ W+ ++
Sbjct: 375 PVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEK 434
Query: 482 GLKNI-HLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLN 540
G + + ++W E + YL I R + +PG S D L
Sbjct: 435 GKQRVEERYTWQETARGYLEVIQEIADRKDEEDEGGSLNIPDYFTNPGAS----NDEKLL 490
Query: 541 LKFS 544
F+
Sbjct: 491 DTFN 494
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 455 bits (1171), Expect = e-147
Identities = 132/529 (24%), Positives = 226/529 (42%), Gaps = 57/529 (10%)
Query: 10 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPG----------VYRVDLLTRQVS 59
S HG +N+ LG DTGGQV Y+++ RAL R+ +LTR +
Sbjct: 285 SPHGYFAQDNV-LGY-PDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLL- 341
Query: 60 APDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHI 115
V + GE E + +S I+R+PF + K+I++ +WP++
Sbjct: 342 PDAVGTTCGERLERV------------YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYL 389
Query: 116 PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGH 175
+ + A + + P I G+Y+D A+LL+ L V H
Sbjct: 390 ETYTEDAAVELSKEL-----------NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAH 438
Query: 176 SLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYD 235
+L + K + + +++ Y + A+ +++ ++ +ITST QEI
Sbjct: 439 ALEKTKY----PDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVG 494
Query: 236 GFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETE-GNEDNPA 294
++ + R V F P+ I+ PG + P + T+ +E
Sbjct: 495 QYESHTAFT-LPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEEL 553
Query: 295 SPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 354
E + + +KP++ +AR D KN++ LV+ +G+ LRELANL ++ G+R
Sbjct: 554 LYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDR 613
Query: 355 DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPA 413
+ + A + + LI++Y L GQ + + E+YR TKG F+ PA
Sbjct: 614 RKESKDNEEKA-EMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPA 672
Query: 414 FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHD----QQSVADALLKLV 469
E FGLT++EA GLP AT GGP +I +G +DP+ ++AD K
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732
Query: 470 ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKPRHPQWQRNDD 517
D W + GL+ I ++W + + L+ + W+ +
Sbjct: 733 EDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT----LTGVYGFWKHVSN 777
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 3e-89
Identities = 95/499 (19%), Positives = 165/499 (33%), Gaps = 98/499 (19%)
Query: 20 MELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS 79
++ D+GG Y++ A L VD+ TR +
Sbjct: 33 LQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQ------GEIVRVAE--- 81
Query: 80 DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGG 139
+I I GP + ++KE L + F G L+ R
Sbjct: 82 -----------NLRVINIAAGPYE-GLSKEELPTQLAAFTGGMLSFTRR----------- 118
Query: 140 GKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINAT 199
+ V IH HY +G LL +P++ T H+L K T
Sbjct: 119 -EKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSD---------T 168
Query: 200 YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKF 259
+ R E+ +D ++++ +T++E+++ Y DP
Sbjct: 169 PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY-DADP-------------------- 207
Query: 260 MPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 319
R++++ PG + P D V+ +
Sbjct: 208 -DRISVVSPGADVELYSP-----------------GNDRATERSRRELGIPLHTKVVAFV 249
Query: 320 ARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKY 378
R P K L+KA NL + I G G + + + ++
Sbjct: 250 GRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPD-------TYRHMAEEL 302
Query: 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 438
+ ++ + S++ +YR A + P+F E FGL +EA A G P++A + G
Sbjct: 303 GVEKRIRFLDPRPPSELVAVYRAA----DIVAVPSFNESFGLVAMEAQASGTPVIAARVG 358
Query: 439 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 498
G + GLLVD H + ADAL L+ D + R ++ +++ FSW
Sbjct: 359 GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQL 418
Query: 499 LS---RIAGCKPRHPQWQR 514
S + +
Sbjct: 419 SSLYNDAIANENVDGETHH 437
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-33
Identities = 66/468 (14%), Positives = 128/468 (27%), Gaps = 129/468 (27%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG + + +A + + G V + T+
Sbjct: 14 GGLQRDFMRIASTVAAR-GH-HVRVYTQSWEGDCPK------------------------ 47
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 148
+I++P + E+ NH+ +
Sbjct: 48 --AFELIQVPVKSHTNH-------GRNAEYYAWVQNHLKEHP--------------ADRV 84
Query: 149 HGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEA 208
G G + + RL+ Y+ E
Sbjct: 85 VGFNKMPGLDVYFAADVCYAEKVAQEKGFLY----------RLTS-----RYRHYAAFER 129
Query: 209 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 268
S ++ T ++I + + Y +P R I+PP
Sbjct: 130 ATFEQGKSTKLMMLTDKQIADFQKHY-QTEP---------------------ERFQILPP 167
Query: 269 GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR--FFTNPRKPVILALARPDPKK 326
G+ D S P EI R ++ ++L + +K
Sbjct: 168 GI------------------YPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRK 209
Query: 327 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 386
+ ++A N L + +D + L +K + V +
Sbjct: 210 GVDRSIEALASLPE-SLRHNTLLFVVGQDKPRKF-----------EALAEKLGVRSNVHF 257
Query: 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 446
++DV E+ A + ++PA+ E G+ L+EA GLP++ T G +
Sbjct: 258 FSG--RNDVSELMAAAD----LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHY--I 309
Query: 447 LD--NGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSW 491
D G ++ +P Q+ + + L K + L +N
Sbjct: 310 ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-32
Identities = 65/479 (13%), Positives = 145/479 (30%), Gaps = 134/479 (27%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG EL + L G + + +T +
Sbjct: 27 GGSGVVGTELGKQLAER-G-HEIHFITSGLPFRLNK-----------------------V 61
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKP-VWPVA 147
Y + F + + +++ + E +
Sbjct: 62 YPNIYFHEVTV-------------NQYSVFQYPPYD--LALASKMAEVAQRENLDI---- 102
Query: 148 IHGHYADAGDSAALLSGAL---NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMR 204
+H HYA A L+ + + ++ T H +I
Sbjct: 103 LHVHYAIPHAICAYLAKQMIGERIKIVTTLHGT-----------------DITVLGSDPS 145
Query: 205 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA 264
++ S++V + I E L +
Sbjct: 146 LNNLIRFGIEQSDVVTAVSHSLINETHELVKPNK-----------------------DIQ 182
Query: 265 IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324
+ ++ +D + + + + +++ ++
Sbjct: 183 TVYNFIDERVYFKRDMTQLKK--------------------EYGISESEKILIHISNFRK 222
Query: 325 KKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383
K + +V+AF + + + L++ G DG E ++L+L+ + +
Sbjct: 223 VKRVQDVVQAFAK---IVTEVDAKLLLVG--DG-PEFC--------TILQLVKNLHIEDR 268
Query: 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI 443
V + KQ +V E+ ++ + + + E FGL L+EA A G+P + T+ GG ++
Sbjct: 269 VLF--LGKQDNVAELLAMSD----LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322
Query: 444 HRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYL 499
+ G L + D VAD ++L+ D++L + ++++ F + Y
Sbjct: 323 --IQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-28
Identities = 73/500 (14%), Positives = 145/500 (29%), Gaps = 143/500 (28%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG Y+ + + + +A + + +
Sbjct: 19 GGIQSYLRDFIATQDPE----SIVVFASTQNAEE-----AHAYD---------------K 54
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 148
+ +IR P +L A+ IIR +
Sbjct: 55 TLDYEVIRWPRSV--------MLPTP---TTAHAMAEIIRERE-------------IDNV 90
Query: 149 HGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 207
A A A ++ + H + + + + +R+I
Sbjct: 91 WFGAAAPLALMAGTAKQAGASKVIASTHG------------HEVGWSMLPGSRQSLRKI- 137
Query: 208 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 267
+++ ++ + + P +P
Sbjct: 138 -----GTEVDVLTYISQYTLRRFKSAFGS-----------------------HPTFEHLP 169
Query: 268 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 327
G+ D+ PA+P+ + + PVI +R P+K
Sbjct: 170 SGV----------DVK------RFTPATPEDK-SATRKKLGFTDTTPVIACNSRLVPRKG 212
Query: 328 ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387
+L+KA + R A L LI+G+ + + V +V G++ Y
Sbjct: 213 QDSLIKAMPQVIAARPDAQL-LIVGSGRYESTLRRLATDVSQNVK-------FLGRLEYQ 264
Query: 388 KHHKQSDVPEIYRLAAKTKGVFINPAFI-------EPFGLTLIEAAAHGLPIVATKNGGP 440
D+ A +F PA E G+ +EA A G+P++A +GG
Sbjct: 265 ------DMINTLAAAD----IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA 314
Query: 441 VDIHRVLD-NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWP------ 492
+ V GL+V+ D +++ L++L+ D A G ++ +SW
Sbjct: 315 PET--VTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERL 372
Query: 493 -EHCKTYLSRIAGCKPRHPQ 511
++ ++A H
Sbjct: 373 TNILQSEPRKLAAALEHHHH 392
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 6e-28
Identities = 31/181 (17%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 314 PVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVL 372
I + R +KN + L+KA + ++ L + G G DE +
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVAL---SKYKQDIVLLLKG--KGPDE----------KKI 47
Query: 373 K-LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL- 430
K L K + + + +++ EI + ++++ A +E + +EA + G+
Sbjct: 48 KLLAQKLGVKAEFGFVNS---NELLEILKTCT----LYVHAANVESEAIACLEAISVGIV 100
Query: 431 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 490
P++A LD L +P++ + ++ + + +K R + K+ ++
Sbjct: 101 PVIANSPLSATRQF-ALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYT 159
Query: 491 W 491
Sbjct: 160 L 160
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 8e-28
Identities = 51/273 (18%), Positives = 100/273 (36%), Gaps = 44/273 (16%)
Query: 241 LERKLRARIKRNVSCYGKFMP------RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA 294
R+ + R + +++ + I+PP I P E N
Sbjct: 168 FLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPS-----IDPLS----------EKNVE 212
Query: 295 SPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM--- 351
I + RF +P KP+I ++R DP K I +++ + + + ++ + L++
Sbjct: 213 LKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVK--EKIPGVQLLLVGV 270
Query: 352 GNRDGIDEMSSTSASVLLSVLK-LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410
D + L+ + + YD+ H + +V R + V +
Sbjct: 271 MAHDDPEG-----WIYFEKTLRKIGEDYDVKVLTNLIGVHAR-EVNAFQRASD----VIL 320
Query: 411 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKL 468
+ E FGLT+ EA G P++ GG ++D G LV + + +L L
Sbjct: 321 QMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQ--IVDGETGFLVRDAN--EAVEVVLYL 376
Query: 469 VADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 500
+ ++ + + F +H + YL
Sbjct: 377 LKHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 79/472 (16%), Positives = 126/472 (26%), Gaps = 144/472 (30%)
Query: 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 88
GG +V++LA L G V +L + + +
Sbjct: 35 GGVQSHVLQLAEVLRDA-GH-EVSVLAP-------ASPHVKLPD--------------YV 71
Query: 89 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKP-VWPVA 147
SG + IP+ L + + I G V
Sbjct: 72 VSGGKAVPIPYNGSVAR-----------------LRFGPATHRKVKKWIAEGDFDV---- 110
Query: 148 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 207
+H H +A + L A P++ T H+ + + I+R
Sbjct: 111 LHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-----LTLSVFQG-------ILRPYH 158
Query: 208 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 267
+ + V R+ E IP
Sbjct: 159 EK---IIGRIAVSDLARRWQMEALG----------------------------SDAVEIP 187
Query: 268 PGM---EFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD- 323
G+ F A +L L R D
Sbjct: 188 NGVDVASFA-------------------DAPLLDGY---------PREGRTVLFLGRYDE 219
Query: 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383
P+K + L+ A + + LI+G G + L GQ
Sbjct: 220 PRKGMAVLLAALPKLVARFPDVEI-LIVG--RG------DEDELREQAGDLAGHLRFLGQ 270
Query: 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVD 442
V + R A V+ P E FG+ L+EA A G +VA+
Sbjct: 271 VD------DATKASAMRSAD----VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRR 320
Query: 443 IHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWP 492
+ + D G LV D +A AL+ ++ D QL A + +H + W
Sbjct: 321 V--LADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS 370
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 4e-23
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 298 PPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDG 356
P+ E +F L++ R P+K I ++ F ++L + L + G
Sbjct: 10 HPV--ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVF------KKLQDEKLYIVGWFSK 61
Query: 357 IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE 416
D + ++ D G V + ++ ++Y K + A E
Sbjct: 62 GDHAERYARKIMKIAP---DNVKFLGSV------SEEELIDLYS-RCK---GLLCTAKDE 108
Query: 417 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQL 474
FGLT IEA A G P++A GG + V++ G LV+ D + DA+ K+ +
Sbjct: 109 DFGLTPIEAMASGKPVIAVNEGGFKET--VINEKTGYLVNA-DVNEIIDAMKKVSKNPD- 164
Query: 475 WARCRQNGLKNIHLF 489
+ +++ + F
Sbjct: 165 --KFKKDCFRRAKEF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 90.6 bits (224), Expect = 3e-19
Identities = 25/199 (12%), Positives = 68/199 (34%), Gaps = 24/199 (12%)
Query: 298 PPIWSEIMRFFTNPR--KPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNR 354
P I + + + + R + +IL RP + T +V+A + +N I+
Sbjct: 224 PKINTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVG 283
Query: 355 DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF 414
+ ++ L + G++ D ++ + ++ + I+
Sbjct: 284 EKHKDI----------ALGKGIHLNSLGKLT------LEDYADLLKRSS----IGISLMI 323
Query: 415 IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 474
+E A GL ++ D+ N + ++ + +++A+ L++L
Sbjct: 324 SPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNN 382
Query: 475 WARCRQNGLKNIHLFSWPE 493
++ + +
Sbjct: 383 RDVDKKESSNMMFYINEFN 401
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 82.5 bits (203), Expect = 1e-16
Identities = 37/270 (13%), Positives = 68/270 (25%), Gaps = 37/270 (13%)
Query: 252 NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNP 311
V K +IV D +++
Sbjct: 136 GVMAMSKCWISDICNYGCKVPINIVSHFVDTK-------------TIYDARKLVGLSEYN 182
Query: 312 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLS 370
+ L + R +K + V A A + L + + ++ S + L++
Sbjct: 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVA 242
Query: 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430
L + V +Y V +N + E FGL E A G
Sbjct: 243 SGVDNVFTHLNKIMINRTVLTDERVDMMYNACD----VIVNCSSGEGFGLCSAEGAVLGK 298
Query: 431 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVAD-----------------ALLKLVADKQ 473
P++ + GG D D + P SV D D++
Sbjct: 299 PLIISAVGGADDYFS-GDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEK 357
Query: 474 LWARCRQNGLKNIH-LFSWPEHCKTYLSRI 502
+ + +W + +
Sbjct: 358 NRKEYGKRVQDFVKTKPTWDDISSDIIDFF 387
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 33/188 (17%)
Query: 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLL 369
++ +L + R P K L++ G + +
Sbjct: 160 AKEDFLLFMGRVSPHKGALEAAAFA-------HACGRRLVLAGPAWEPEYFDEITR---- 208
Query: 370 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA------KTKGVFINPAFIEPFGLTLI 423
+ + G+V ++ A + + EP +
Sbjct: 209 ---RYGSTVEPIGEVG------GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 424 EAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483
EAA G P+V T NG + ++ + V + D + +A R+
Sbjct: 260 EAAVSGTPVVGTGNGCLAE---IVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRR--- 313
Query: 484 KNIHLFSW 491
+ L+
Sbjct: 314 AAVRLWGH 321
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 3e-08
Identities = 95/670 (14%), Positives = 173/670 (25%), Gaps = 211/670 (31%)
Query: 179 RDKLEQLLKQARLSRD-EINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 237
+D L + + + + I ++E + I+++ + RL+
Sbjct: 19 KDILSVFEDA--FVDNFDCKDVQDMPKSILSKE---EIDHIIMSKDA--VSGTLRLFW-- 69
Query: 238 DPVLERKLRARIKRNVSC-----YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292
L K +++ V Y M + + M + +
Sbjct: 70 --TLLSKQEEMVQKFVEEVLRINYKFLMSPI----------KTEQRQPSMMTRMYIEQRD 117
Query: 293 PASPDPPIWSEIMRFFTNPRKPVIL----ALARPDPKKNI----------TTLVKAFGEC 338
D ++++ + R L AL P KN+ T + C
Sbjct: 118 RLYNDNQVFAK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV--C 171
Query: 339 RPLRELANLT-----LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS 393
+ + L + N + + +L +L+ L Q+ P +S
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPET--------VLEMLQ-----KLLYQID-PNWTSRS 217
Query: 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453
D +L I+ L++ + +N LLV
Sbjct: 218 DHSSNIKL---------RIHSIQAELRRLLK-------------------SKPYENCLLV 249
Query: 454 DPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL-SR-------IAGC 505
L V + + W F+ CK L +R ++
Sbjct: 250 ------------LLNVQNAKAWN-----------AFNL--SCKILLTTRFKQVTDFLSAA 284
Query: 506 KPRHPQWQRNDDGGETSESDS---------PGDSLRDIQDISLNLKFSLDGEKSGASGND 556
H + E S P D R++ + + S+ E
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSIIAES------- 336
Query: 557 DSLDSEGNVADRKSRLENAVLAWSK---GVLKDTRKSGSTDKVDQNTGAAKFPALRRR-- 611
+ D + +N W L +S S + ++ PA R+
Sbjct: 337 --------IRDGLATWDN----WKHVNCDKLTTIIES-SLNVLE--------PAEYRKMF 375
Query: 612 KHIFVISVDCDSTTGLL-----DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS 666
+ V T LL D K V + + S+ TIS I S +
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS-IPSIYLE 434
Query: 667 GHLSPSD--------FDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEY--------- 709
+ + D + D D Y++SHI +
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ------YFYSHIGHHLKNIEHPE 488
Query: 710 RWGGEGLRKTLV--RWASQVTDKKAESGEKVLTPAEQLST-----NYCYAFSVQKPGMTP 762
R R + R+ Q K L+T Y P
Sbjct: 489 RM--TLFRMVFLDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543
Query: 763 PVKELRKVLR 772
V + L
Sbjct: 544 LVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 71/493 (14%), Positives = 155/493 (31%), Gaps = 156/493 (31%)
Query: 52 DLLTRQVSAPDVDWSYGEPTE----------MLTPRNS--DDFMDDMGESSGAYII---- 95
D+ +S ++D +L+ + F++++ + +++
Sbjct: 40 DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99
Query: 96 ---RIPFGPKDKYI-AKELLWPHIPEFVDGALN---HIIRMSNVLGEQIGGGKPVWPVAI 148
R P YI ++ L+ F ++ +++ L E +P V I
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAKNVLI 155
Query: 149 HGHYADAGDS----AALLSGALNVPMLFTGH--SLGR--------DKLEQLLKQARLS-- 192
G +G + LS + M F +L + L++LL Q +
Sbjct: 156 DG-VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 193 ---------RDEINATYKIMRRIEAEE------LSLD-------------ASEIVITSTR 224
+ I++ +RR+ + L L + +I++T TR
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT-TR 273
Query: 225 Q---------EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHI 275
L + ++++ + + + C + +PR E
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR--------EVLTT 325
Query: 276 VPQDGDMDGETEGNEDNPASPDPPIW--------SEIMRFFTNPRKPVI-------LALA 320
P+ + E+ D A+ D W + I+ N +P L++
Sbjct: 326 NPRRLSIIAESI--RDGLATWDN--WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 321 RPDPKKNITTLV-------KAFGECRP-LRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372
P +I T++ + + +L +L+ + E + + S+ L +
Sbjct: 382 PPS--AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV--EKQP-KESTISIPSIYLELK 436
Query: 373 -----------KLIDKYDL------------------YGQVAYPKHHKQSDVPEIYRLAA 403
++D Y++ Y + + H K + PE L
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPERMTLFR 494
Query: 404 KTKGVFINPAFIE 416
VF++ F+E
Sbjct: 495 M---VFLDFRFLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 70/471 (14%), Positives = 131/471 (27%), Gaps = 150/471 (31%)
Query: 42 LGSMPGVYRVDLLT--RQVSAPDVDWSYGE--PTEMLTPRNSDDFMDDMGESSGAYIIRI 97
G Y+ D+L+ + D + P +L+ D + SG +
Sbjct: 11 TGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 98 PFGPKDKYIAKELLWPHIPEFVDGAL--NHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 155
K + + ++ FV+ L N+ MS + EQ P + Y +
Sbjct: 70 TLLSKQEEMVQK--------FVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQ 115
Query: 156 GDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLS-RDEIN----------------- 197
D N +F +++ R + L+QA L R N
Sbjct: 116 RDRL------YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169
Query: 198 --ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSC 255
+YK+ +++ + L+ S +E +L DP
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWTS------------ 215
Query: 256 YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS---EIMRFFTNPR 312
D+ ++ I S E+ R +
Sbjct: 216 ---------------------------------RSDHSSNIKLRIHSIQAELRRLLKSKP 242
Query: 313 KP---VILALARPDPKKNI--TTLVKAFG-ECRPL---RELANLTLIMGNRDG---IDEM 360
++L N+ AF C+ L R + +D
Sbjct: 243 YENCLLVL-----L---NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 361 SST-----SASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI 415
S T S+LL L + D+P T NP +
Sbjct: 295 SMTLTPDEVKSLLLKYL----------------DCRPQDLPR----EVLT----TNPRRL 330
Query: 416 EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADAL 465
++ + A K+ + ++++ L V +P + + + D L
Sbjct: 331 SIIAESIRDGLAT---WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 4e-04
Identities = 61/403 (15%), Positives = 117/403 (29%), Gaps = 124/403 (30%)
Query: 389 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD 448
HH + E VF AF++ F ++ + +K +D
Sbjct: 5 HHMDFETGEHQYQYKDILSVFE-DAFVDNFDCKDVQDM---PKSILSK--------EEID 52
Query: 449 NGLLVDPHDQQSVADALLKLVADKQ--LWARCRQNGL-KNIHLFSWPEHCKTYLSRIAGC 505
+ +++ L + KQ + + + L N + + +S I
Sbjct: 53 H-IIMSKDAVSGT-LRLFWTLLSKQEEMVQKFVEEVLRIN---YKF------LMSPI--- 98
Query: 506 KPRHPQWQRNDDGGETSESDSPGDSL-RDIQDIS----------LNLKFSLDGEKSGASG 554
+ ++ T D L D Q + L L+ +L
Sbjct: 99 -----KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL-------- 145
Query: 555 NDDSLDSEGNVADR------KSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608
L NV K+ +A V KV K
Sbjct: 146 ---ELRPAKNVLIDGVLGSGKT-----WVALD--VCLS-------YKVQC-----KMDF- 182
Query: 609 RRRKHIFVISV-DCDSTTGLLDATKKICEAVEK---ERTEGSIGFILSTSMTISEIHSFL 664
IF +++ +C+S +L+ +K+ ++ R++ S L +E+ L
Sbjct: 183 ----KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 665 VSGHL-----------SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDF-----YYHSHIE 708
S + ++AF N + +T + V DF H ++
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAF--NLSCKILLTTRFKQ----VTDFLSAATTTHISLD 292
Query: 709 YRWGGEGLRKT---LVRWASQVTDKKAESGEKVLTPAEQLSTN 748
+ + L+++ L P E L+TN
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQD--------L-PREVLTTN 326
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 4e-06
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 15/119 (12%)
Query: 396 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-------PVDIHRVLD 448
Y + + + P++ EP+G T E G+P + T G ++ ++ D
Sbjct: 509 GLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD 568
Query: 449 NGLLVDPHDQQSV-------ADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYL 499
G+ + ++ D + + V ++ R L W Y+
Sbjct: 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV 627
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 37/232 (15%)
Query: 614 IFVISVDCDSTTGLLDATKKI--CEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 671
++ D D+T + + + + +R +T + +
Sbjct: 3 QLLLISDLDNT--WVGDQQALEHLQEYLGDRRGN-FYLAYATGRSYHSARELQ--KQVGL 57
Query: 672 SDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKK 731
+ D ++ GS++Y+ + + ++ W + L+
Sbjct: 58 MEPDYWLTAVGSEIYHPEGLDQH--------WADYLSEHWQRDILQAIA----------- 98
Query: 732 AESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV-KELRKVLRIQALRCHVIYCQNGSRIN 790
G + L P L N P P V +L ++L+ + VI+ ++
Sbjct: 99 --DGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKD-VD 155
Query: 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT--DYEGLLGGVHKTVI 840
++P +++ A +YL +E S+ +V GD+ D L + VI
Sbjct: 156 LLPQRSNKGNATQYLQQHLAMEPSQTLVC----GDSGNDIG-LFETSARGVI 202
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 416 EPFGLTLIEAAAHG-LPIV-ATKNGGPVDIHRVLD-NGLLVDPHDQQSVADALLK-LVAD 471
EPFGL +EA G +PI A GG DI + + G+LV D +A+A+LK L
Sbjct: 126 EPFGLVALEAMCLGAIPIASAV--GGLRDI--ITNETGILVKAGDPGELANAILKALELS 181
Query: 472 KQLWARCRQNGLKNIHLFSW 491
+ ++ R+N K S+
Sbjct: 182 RSDLSKFRENCKKRA--MSF 199
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 29/217 (13%), Positives = 75/217 (34%), Gaps = 24/217 (11%)
Query: 619 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 678
++ + +E++ +G + T +I I + G
Sbjct: 34 FPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF-RYFPHFIA 92
Query: 679 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 738
+ G+++ Y SE D ++S I + E + K + + E+ +
Sbjct: 93 SDLGTEITY---FSEHNFGQQDNKWNSRINEGFSKEKVEK--------LVKQLHENHNIL 141
Query: 739 LTPAEQLSTNYC----YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR------ 788
L P QL + Y + + + K+ + ++ C +
Sbjct: 142 LNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201
Query: 789 -INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESG 824
++ IP+ +++ + ++ ++ + + + F G+SG
Sbjct: 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAF-GDSG 237
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 895 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 4e-22 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 9e-22 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 3e-18 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 4e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 5e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 98.2 bits (243), Expect = 4e-22
Identities = 60/376 (15%), Positives = 113/376 (30%), Gaps = 56/376 (14%)
Query: 145 PVAIHGHYADAGDSAALL--SGALNVPMLFTGHS------LGRDKLEQLLKQARLSRDEI 196
P +H H A + + + +P L T H+ G + +L A E
Sbjct: 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEG 190
Query: 197 NATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY 256
Y + ++ + A V S +EI L F LE + +R
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEEI-----LTAEFGMGLEGVIGSRAHV----- 240
Query: 257 GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 316
+ I G++ P + + + + P+
Sbjct: 241 ------LHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLF 294
Query: 317 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376
++R +K I + +A E L ++ ++ L
Sbjct: 295 CVISRLTWQKGIDLMAEAVDEIV--SLGGRLVVLGAGDVALEGA------------LLAA 340
Query: 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436
+G+V + + + I P+ EP GLT + A +G V +
Sbjct: 341 ASRHHGRVGVAIGYNEPLSHLMQAGCD----AIIIPSRFEPCGLTQLYALRYGCIPVVAR 396
Query: 437 NGGPVDI---------HRVLDNGLLVDPHDQQSVADAL---LKLVADKQLWARCRQNGLK 484
GG D G+ P + A+ ++ D +LW + ++ G+K
Sbjct: 397 TGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK 456
Query: 485 NIHLFSWPEHCKTYLS 500
SW + Y +
Sbjct: 457 --SDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 96.8 bits (239), Expect = 9e-22
Identities = 82/474 (17%), Positives = 157/474 (33%), Gaps = 66/474 (13%)
Query: 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMG 87
GG + + ++ AL S+ G + V + T + E ++
Sbjct: 15 VGGLAEALTAISEALASL-G-HEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYE 68
Query: 88 ESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVA 147
E I RI G D ++++ P + A+ +L + + P
Sbjct: 69 ERGNLRIYRIGGGLLD---SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEP--LPDV 123
Query: 148 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 207
+H H + AL+ +P +FT H L + KL A + + I+
Sbjct: 124 VHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKL-----PAFYFHEAGLSELAPYPDID 178
Query: 208 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 267
E ++IV T +R + ++W + F+ ++ +
Sbjct: 179 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG----------------------KITYVF 216
Query: 268 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 327
G++ S D S + +F + + +K
Sbjct: 217 NGIDCSFWN------------ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKG 264
Query: 328 ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387
+ L+KA +E + I+ + + + +G V
Sbjct: 265 VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG-----------WARSLEEKHGNVKVI 313
Query: 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 447
+ + I P++ EPFGL +EA G +A+ GG DI
Sbjct: 314 TEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-N 369
Query: 448 DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLS 500
+ G+LV D +A+A+LK + + ++ R+N K FSW + + Y+
Sbjct: 370 ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 86.1 bits (212), Expect = 3e-18
Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 32/276 (11%)
Query: 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSE 303
++ R ++ + +GK R + P G+E I Q A P PP ++
Sbjct: 202 RVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQ--------------AAGPLPPKLAQ 246
Query: 304 IMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-----GNRDGID 358
+ N I ++ R D K + A+ + + +R +
Sbjct: 247 LKAELKN--VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQ 304
Query: 359 EMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 418
+ ++ KY G ++ D + ++ + V + +
Sbjct: 305 AYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTPLRDGM 363
Query: 419 GLTLIEAAAHGLP-----IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DK 472
L E A P +V ++ G + L + L+V+P+D+ VA AL + +
Sbjct: 364 NLVAKEYVAAQDPANPGVLVLSQFAGAANE---LTSALIVNPYDRDEVAAALDRALTMSL 420
Query: 473 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508
L I + ++S + PR
Sbjct: 421 AERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 456
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 57.2 bits (136), Expect = 4e-09
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 428 HGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486
GLP++ T G + G ++ +P Q+ + + L K + L +N
Sbjct: 292 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYA 351
Query: 487 HLFSWPEHCKTYLSRIAG 504
+ I G
Sbjct: 352 DTQDLYSLPEKAADIITG 369
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 45.9 bits (107), Expect = 5e-06
Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 17/204 (8%)
Query: 289 NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD-PKKNITTLVKAFGECRPLRELANL 347
NE ++ F + + R D +K + L+KA +E +
Sbjct: 8 NESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM 67
Query: 348 TLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKG 407
I+ + + + + L + + V
Sbjct: 68 RFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 127
Query: 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLK 467
G +A+ GG DI + G+LV D +A+A+LK
Sbjct: 128 ALEAMC--------------LGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILK 172
Query: 468 LVA-DKQLWARCRQNGLKNIHLFS 490
+ + ++ R+N K FS
Sbjct: 173 ALELSRSDLSKFRENCKKRAMSFS 196
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 895 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 100.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 100.0 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 100.0 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 100.0 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 100.0 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 100.0 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.97 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.96 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.96 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.94 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.92 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.92 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.86 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.6 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.55 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.52 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.52 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.44 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.26 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.07 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.96 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.95 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.89 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.86 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.84 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.82 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.79 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.78 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.77 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.68 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.53 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.5 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.45 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.25 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.11 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.73 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.62 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.56 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.53 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.52 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.29 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.88 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.84 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.27 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.23 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.11 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.01 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 95.92 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.9 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.75 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.25 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.4 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.38 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 94.27 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.91 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 93.81 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 90.93 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 90.64 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 88.94 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 87.35 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 86.37 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.42 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=336.96 Aligned_cols=425 Identities=21% Similarity=0.254 Sum_probs=286.6
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 067533204444567656888899-9841579999999980599911799952685599999887975311589999863
Q 002660 4 NNYFACSIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~-~GG~~~~v~~La~~L~~~G~~h~V~vvt~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
|||++++..+. |. +||+++++..|+++|+++| |+|+|+|+....-. ............ ....
T Consensus 1 MkIl~~~~~~p-----------P~~~GG~~~~~~~La~~L~~~G--h~V~Vvtp~~~~~~--~~~~~~~~~~~~--~~~~ 63 (437)
T d2bisa1 1 MKVLLLGFEFL-----------PVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQ--GEEIGKIRVFGE--EVQV 63 (437)
T ss_dssp CEEEEECSCCT-----------TCCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTSSC--CEEEEEEECSSS--EEEE
T ss_pred CEEEEECCCCC-----------CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC--HHHCCCEEECCC--CCCE
T ss_conf 98799877458-----------8455879999999999999769--98999905898655--444154022154--4201
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf 44579999709994689998766322258-99847889999999998633200113899988782999235661128999
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELL-WPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAAL 161 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~-~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDiVh~h~~~~~~~~~~ 161 (895)
........++.+.++..+ ++..... .+...........+.......+...+. +...||+||+|++..++++..
T Consensus 64 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~pDiIh~~~~~~~~~~~~ 137 (437)
T d2bisa1 64 KVSYEERGNLRIYRIGGG----LLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLR--EEPLPDVVHFHDWHTVFAGAL 137 (437)
T ss_dssp EEEEEEETTEEEEEEESS----GGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTT--SSCCCSEEEEETGGGHHHHHH
T ss_pred EEEEECCCCEEEEECCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCEEEECCHHHHHHHHH
T ss_conf 123322588179961754----34541125531146899999989999998999984--089997899897046667654
Q ss_pred HHCCCCCCEEEEECCCCHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHH
Q ss_conf 85017998999808982414999999-71015888876543667789998410246899927969999999651499957
Q 002660 162 LSGALNVPMLFTGHSLGRDKLEQLLK-QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240 (895)
Q Consensus 162 ~~~~~~ip~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~~s~~~~~~~~~~~~~~~~~ 240 (895)
+++..++|+|++.|+........... ..... ......++..++.....+|.+++++.....+....+....
T Consensus 138 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~-- 209 (437)
T d2bisa1 138 IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLS------ELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFE-- 209 (437)
T ss_dssp HHHHHCCCEEEEESSCCCCCEEHHHHHHTTCG------GGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGT--
T ss_pred HHCCCCCCEEEEEEECCCCCCCHHHHHHCCCH------HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC--
T ss_conf 30134676258996214455512332101201------3456778899988887652211110245666666513456--
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHCCCCCCCEEEEE
Q ss_conf 899999967214333588999889919999899977899999987789999999999941-6886421389997499997
Q 002660 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI-WSEIMRFFTNPRKPVILAL 319 (895)
Q Consensus 241 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~il~v 319 (895)
.++.++|||+|.+.|.+..... ..... .....+++ ..++++++++
T Consensus 210 --------------------~ki~vi~~g~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~~~~~~i~~~ 255 (437)
T d2bisa1 210 --------------------GKITYVFNGIDCSFWNESYLTG-------------SRDERKKSLLSKFG-MDEGVTFMFI 255 (437)
T ss_dssp --------------------TTEEECCCCCCTTTSCGGGCCS-------------CHHHHHHHHHHHTT-CCSCEEEEEE
T ss_pred --------------------CCEEEEECCCCCCCCCCCCCCH-------------HHHHHHHHHHHHHH-CCCCCEEEEE
T ss_conf --------------------7518970465443433222201-------------05888876545540-2678669873
Q ss_pred ECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHH
Q ss_conf 2789-98998999999975125469971999-981499964222002899999999998629999688499999898999
Q 002660 320 ARPD-PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 397 (895)
Q Consensus 320 grl~-~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ 397 (895)
||+. ++||++.+++|+..+......+++++ ++|.++.. ....+..+... ....+.+.+.++.+++..
T Consensus 256 G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 324 (437)
T d2bisa1 256 GRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE---------LEGWARSLEEK--HGNVKVITEMLSREFVRE 324 (437)
T ss_dssp SCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH---------HHHHHHHHHHT--CTTEEEECSCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC---------CCCCHHHHCCC--CCCCEECCCCCCHHHHHH
T ss_conf 0356651258999864102332333332114531022333---------32100221023--210000234576888999
Q ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHCCCCCCCEEEECCCCHHHHHHHHHHHHH-CHHHHH
Q ss_conf 9998122994999469999996699999990998998188882000104987189199999999999999973-999999
Q 002660 398 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWA 476 (895)
Q Consensus 398 ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~ 476 (895)
+|+.| |++++||..|++|++++|||+||+|||+++.||..|++.+ .+|+++++.|+++++++|.++++ +++.++
T Consensus 325 ~~~~a----di~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~~ 399 (437)
T d2bisa1 325 LYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLS 399 (437)
T ss_dssp HHTTC----SEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTTSCTH
T ss_pred HHHHH----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 87642----2354446555642689999987998999389980773778-958997799999999999999837999999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 999999888540998999999999998116999
Q 002660 477 RCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 477 ~~~~~~~~~~~~~s~~~~a~~~~~~l~~~~~~~ 509 (895)
++++++++.+++|||++++++|+++|++++++.
T Consensus 400 ~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 400 KFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999996999999999999999999867
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=341.40 Aligned_cols=449 Identities=16% Similarity=0.128 Sum_probs=270.2
Q ss_pred EEEEEEECCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 06753320444456765688889--9984157999999998059991179995268559999988797531158999986
Q 002660 4 NNYFACSIHGLIRGENMELGRDS--DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~--~~GG~~~~v~~La~~L~~~G~~h~V~vvt~~~~~~~~~~~y~~~~e~~~~~~~~~ 81 (895)
|||+|||.-.+ | .+||...++.+|+++|+++| |+|+|+|+.+.. ....+..+.+.+.......
T Consensus 1 M~i~~v~~e~~-----------P~~~~GGl~~vv~~La~~L~~~G--h~V~Vi~P~y~~--~~~~~~~~~~~~~~~~~~~ 65 (477)
T d1rzua_ 1 MNVLSVSSEIY-----------PLIKTGGLADVVGALPIALEAHG--VRTRTLIPGYPA--VKAAVTDPVKCFEFTDLLG 65 (477)
T ss_dssp CEEEEECSCBT-----------TTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCHH--HHHHCCSCEEEEEESCSSS
T ss_pred CEEEEEEEEEE-----------CCCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--HHHHCCCCEEEEEEECCCC
T ss_conf 98999977220-----------63326768999999999999769--969999669853--4465256658999714678
Q ss_pred --CCCCCCCCCCEEEEECCCC-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
Q ss_conf --3445799997099946899-----987663222589984788999999999863320011389998878299923566
Q 002660 82 --FMDDMGESSGAYIIRIPFG-----PKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 154 (895)
Q Consensus 82 --~~~~~~~~~gv~i~~i~~~-----~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDiVh~h~~~ 154 (895)
..-......++.++.+... +...+.. .....+...+.. ...+.....+.+...+. ..+|||||+|.|.
T Consensus 66 ~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~pDIvH~h~~~ 140 (477)
T d1rzua_ 66 EKADLLEVQHERLDLLILDAPAYYERSGGPYLG-QTGKDYPDNWKR-FAALSLAAARIGAGVLP---GWRPDMVHAHDWQ 140 (477)
T ss_dssp CCEEEEEEEETTEEEEEEECHHHHCSSSCSSBC-TTSSBCTTHHHH-HHHHHHHHHHHHTTCSS---SCCCSEEEEEHHH
T ss_pred CEEEEEEEEECCEEEEEECCHHHCCCCCCCCCC-CCCCCCCCCHHH-HHHHHHHHHHHHHHCCC---CCCCCEEEECCHH
T ss_conf 547899999899159995582430467873557-666566521889-99999887766530256---8888879933606
Q ss_pred CHHHHHHH--HCCCCCCEEEEECCCCHHHHHH--HHHHHHCCHHHH-HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
Q ss_conf 11289998--5017998999808982414999--999710158888-765436677899984102468999279699999
Q 002660 155 AGDSAALL--SGALNVPMLFTGHSLGRDKLEQ--LLKQARLSRDEI-NATYKIMRRIEAEELSLDASEIVITSTRQEIEE 229 (895)
Q Consensus 155 ~~~~~~~~--~~~~~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~e~~~l~~ad~Vi~~s~~~~~~ 229 (895)
+++.+..+ ++..++|+|+|.|++....... .+..-....... .........+..++..+..+|.++++|....++
T Consensus 141 ~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~ 220 (477)
T d1rzua_ 141 AAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEE 220 (477)
T ss_dssp HTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 77889999985478988899983244234678889988621144406544343205689998877644421311999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHC
Q ss_conf 99651499957899999967214333588999889919999899977899999987789999999999-94168864213
Q 002660 230 QWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPIWSEIMRFF 308 (895)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 308 (895)
....+...... .. .. ....++.+||||+|.+.|.|.....-....... ..... ........+.+
T Consensus 221 ~~~~~~~~~~~--~~-----~~------~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 285 (477)
T d1rzua_ 221 ILTAEFGMGLE--GV-----IG------SRAHVLHGIVNGIDADVWNPATDHLIHDNYSAA--NLKNRALNKKAVAEHFR 285 (477)
T ss_dssp TTSHHHHTTCH--HH-----HH------TTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTT--BCTTHHHHHHHHHHHHT
T ss_pred HHHHHCCCCHH--HH-----HH------HCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHH--HHHHHHHHHHHHHHHCC
T ss_conf 99875475366--56-----66------515647999789340120566453333331045--67776663899887414
Q ss_pred C-CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEC
Q ss_conf 8-999749999727899899899999997512546997199998149996422200289999999999862999968849
Q 002660 309 T-NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 309 ~-~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~ 387 (895)
. .++.++|+++||+.+.||++.+++|+.++.+ ..+++ +++|.|+. ....++...... +.+++.+.
T Consensus 286 ~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~--~~~~l-~~~G~G~~---------~~~~~~~~~~~~--~~~~v~~~ 351 (477)
T d1rzua_ 286 IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRL-VVLGAGDV---------ALEGALLAAASR--HHGRVGVA 351 (477)
T ss_dssp CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEE-EEEECBCH---------HHHHHHHHHHHH--TTTTEEEE
T ss_pred CCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH--HCCEE-EEEECCCC---------HHHHHHHHHHHH--CCCEEEEE
T ss_conf 466786389998500215883799999998786--59839-99936774---------577899998763--58727897
Q ss_pred CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHCCCCCC---------CEEEECCCCH
Q ss_conf 9999898999999812299499946999999669999999099899818888200010498---------7189199999
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD---------NGLLVDPHDQ 458 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~~~---------~g~lv~p~d~ 458 (895)
+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+++.||..|+|.++. +|++++|.|+
T Consensus 352 ~~~~~~~~~~~~~~a----D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~ 427 (477)
T d1rzua_ 352 IGYNEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTL 427 (477)
T ss_dssp ESCCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSH
T ss_pred CCCCHHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCH
T ss_conf 154705799999838----5134886535788899999983998999079997405524875533467874489699999
Q ss_pred HHHHHHHHHHHH---CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 999999999973---9999999999998885409989999999999981169
Q 002660 459 QSVADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 459 ~~la~ai~~ll~---~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~~~~~ 507 (895)
++++++|.++++ +++.++++++++++ ++|||+.++++|+++|++++.
T Consensus 428 ~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 428 DGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHC
T ss_conf 99999999998600799999999999998--518999999999999999849
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-42 Score=288.86 Aligned_cols=366 Identities=16% Similarity=0.195 Sum_probs=255.0
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75332044445676568888999841579999999980599911799952685599999887975311589999863445
Q 002660 6 YFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 85 (895)
Q Consensus 6 I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~vvt~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~ 85 (895)
|+|+..+++ | .||+++++.+||++|+++| |+|+|+|+......
T Consensus 2 i~f~~~~y~-----------p-~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~----------------------- 44 (370)
T d2iw1a1 2 VAFCLYKYF-----------P-FGGLQRDFMRIASTVAARG--HHVRVYTQSWEGDC----------------------- 44 (370)
T ss_dssp EEEECSEEC-----------T-TCHHHHHHHHHHHHHHHTT--CCEEEEESEECSCC-----------------------
T ss_pred EEEEECCCC-----------C-CCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC-----------------------
T ss_conf 899914889-----------9-9989999999999999779--97999956787788-----------------------
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCC
Q ss_conf 79999709994689998766322258998478899999999986332001138999887829992356611289998501
Q 002660 86 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 165 (895)
Q Consensus 86 ~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~ 165 (895)
..++++++++..... ... ....|..++...+.. ..+|+||.+....+.
T Consensus 45 ---~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~--------------~~~d~v~~~~~~~~~-------- 92 (370)
T d2iw1a1 45 ---PKAFELIQVPVKSHT-NHG------RNAEYYAWVQNHLKE--------------HPADRVVGFNKMPGL-------- 92 (370)
T ss_dssp ---CTTCEEEECCCCCSS-HHH------HHHHHHHHHHHHHHH--------------SCCSEEEESSCCTTC--------
T ss_pred ---CCCEEEEECCCCCCC-CCH------HHHHHHHHHHHHHHH--------------CCCCEEEECCCCCHH--------
T ss_conf ---886389986765544-301------158899999999986--------------165525310367237--------
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 79989998089824149999997101588887654366778999841024689992796999999965149995789999
Q 002660 166 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245 (895)
Q Consensus 166 ~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~~s~~~~~~~~~~~~~~~~~~~~~l 245 (895)
... ..++....... ....+. .......++..............++.+++.+......+...+.. .+
T Consensus 93 ---~~~-~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------ 158 (370)
T d2iw1a1 93 ---DVY-FAADVCYAEKV-AQEKGF--LYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQT-EP------ 158 (370)
T ss_dssp ---SEE-ECCSCCHHHHH-HHHCCH--HHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCC-CG------
T ss_pred ---HHH-HHHHCCCCEEE-EEECCC--CCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC-CC------
T ss_conf ---899-87622441046-630474--20004000006788999974215746998247999999986099-96------
Q ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCC
Q ss_conf 99672143335889998899199998999778999999877899999999999416886421389997499997278998
Q 002660 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 325 (895)
Q Consensus 246 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~ 325 (895)
.++.++|||+|.+.+.+.. ........+...+.++++++++++||+.+.
T Consensus 159 ---------------~~i~vi~~gv~~~~~~~~~----------------~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~ 207 (370)
T d2iw1a1 159 ---------------ERFQILPPGIYPDRKYSEQ----------------IPNSREIYRQKNGIKEQQNLLLQVGSDFGR 207 (370)
T ss_dssp ---------------GGEEECCCCCCGGGSGGGS----------------CTTHHHHHHHHTTCCTTCEEEEEECSCTTT
T ss_pred ---------------CEEEEEEEECCCCCCCCCC----------------CHHHHHHHHHCCCCCCCCEEEEEEECCCCC
T ss_conf ---------------4289997402222112467----------------656666654304888663699998514554
Q ss_pred CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCC
Q ss_conf 99899999997512546997199998149996422200289999999999862999968849999989899999981229
Q 002660 326 KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT 405 (895)
Q Consensus 326 Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~ 405 (895)
||++.+++|+..+.+..+...+ +++|+++.. .++..++.+++..+++.|.|. .+++..+|+.|
T Consensus 208 Kg~~~li~a~~~l~~~~~~~~~-~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a--- 270 (370)
T d2iw1a1 208 KGVDRSIEALASLPESLRHNTL-LFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA--- 270 (370)
T ss_dssp TTHHHHHHHHHTSCHHHHHTEE-EEEESSSCC-----------HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC---
T ss_pred CCHHHHCCCCCCCCCCCCCCEE-EECCCCCCC-----------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC---
T ss_conf 2033320111233233221000-001122222-----------232222222222222222332--33444222333---
Q ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHCCCCCCCEEEE-CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 949994699999966999999909989981888820001049871891-9999999999999997399999999999988
Q 002660 406 KGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 406 ~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~~~~g~lv-~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++ +|.|+++++++|.++++|++.++++++++++
T Consensus 271 -dv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~ 349 (370)
T d2iw1a1 271 -DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARH 349 (370)
T ss_dssp -SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf -3444322223433113321457703999389971888527983699869999999999999997699999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHH
Q ss_conf 8540998999999999998
Q 002660 485 NIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 485 ~~~~~s~~~~a~~~~~~l~ 503 (895)
.++.|+|..|.+++.++|+
T Consensus 350 ~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 350 YADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHH
T ss_conf 9998285479999999984
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.9e-37 Score=257.46 Aligned_cols=422 Identities=14% Similarity=0.101 Sum_probs=277.1
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67533204444567656888899984157999999998059991179995268559999988797531158999986344
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~vvt~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
|+..+|-+.- +...+.+.+||..+-+..+.+ +.|| +.+-.+....++.. ...+..
T Consensus 2 rlivvsnr~~-----~~~~~~~~~gGl~~al~~~~~---~~~g---~Wvgw~g~~~~~~~----~~~~~~---------- 56 (456)
T d1uqta_ 2 RLVVVSNRIA-----PPDEHAASAGGLAVGILGALK---AAGG---LWFGWSGETGNEDQ----PLKKVK---------- 56 (456)
T ss_dssp CEEEEEEECC-----CCC----CCCHHHHHHHHHHH---HHCE---EEEEEEEEESCCSS----CCEEEE----------
T ss_pred CEEEEECCCC-----CCCCCCCCCCCHHHHHHHHHH---HCCC---EEEECCCCCCCCCC----HHHHHH----------
T ss_conf 7899979999-----788877899618997299995---1797---89966998876642----345554----------
Q ss_pred CCCCCCCEEEEECCCCCC-----CCCCCCCCCCCCH------HHHHHHH----HHHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf 579999709994689998-----7663222589984------7889999----999998633200113899988782999
Q 002660 85 DMGESSGAYIIRIPFGPK-----DKYIAKELLWPHI------PEFVDGA----LNHIIRMSNVLGEQIGGGKPVWPVAIH 149 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~-----~~~~~~~~~~~~l------~~f~~~~----~~~~~~~~~~l~~~~~~~~~~~pDiVh 149 (895)
..+..+..++..+. -..+++..+||.+ ..|.... ...-+..+..+.+.+. .-|+|+
T Consensus 57 ----~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~~-----~~d~iw 127 (456)
T d1uqta_ 57 ----KGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQ-----DDDIIW 127 (456)
T ss_dssp ----ETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCC-----TTCEEE
T ss_pred ----CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-----CCCEEE
T ss_conf ----05851699569999999999871544262101576665440378888899999999999987256-----898699
Q ss_pred ECCCCCHHHHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
Q ss_conf 2356611289998501-799899980898241499999971015888876543667789998410246899927969999
Q 002660 150 GHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 228 (895)
Q Consensus 150 ~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~~s~~~~~ 228 (895)
+|.+...+++..+.+. .+.+++++.|..++... .+ ..++ .... ....+-.+|.|...+.....
T Consensus 128 vhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~--~f--r~lp---------~~~~---il~~ll~~d~igf~~~~~~~ 191 (456)
T d1uqta_ 128 IHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE--IF--NALP---------TYDT---LLEQLCDYDLLGFQTENDRL 191 (456)
T ss_dssp EESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHH--HH--TTST---------THHH---HHHHHTTSSEEEESSHHHHH
T ss_pred EECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH--HH--CCCC---------CHHH---HHHHHHCCCCCCCCCHHHHH
T ss_conf 9545255569999985899858999689999857--75--5485---------0699---99776322620035899999
Q ss_pred HHHHHHCCCCHHHHHHHHHH--HHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99965149995789999996--7214333588999889919999899977899999987789999999999941688642
Q 002660 229 EQWRLYDGFDPVLERKLRAR--IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR 306 (895)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~--~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (895)
.+..... +.++.. ...++...|+.. ++.++|+|||++.|...... ........++.
T Consensus 192 ~fl~~~~-------~ll~~~~~~~~~i~~~gr~v-~v~~~p~GID~~~~~~~~~~--------------~~~~~~~~l~~ 249 (456)
T d1uqta_ 192 AFLDCLS-------NLTRVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAAG--------------PLPPKLAQLKA 249 (456)
T ss_dssp HHHHHHH-------HHSCEEEETTTEEEETTEEE-EEEECCCCCCHHHHHHHHHS--------------CCCHHHHHHHH
T ss_pred HHHHHHH-------HHHCCCCCCCCEEEECCCEE-EEEEECCCCCCHHHHHHCCC--------------HHHHHHHHHHH
T ss_conf 9999999-------97386112687299568155-30120676562665431140--------------77999999777
Q ss_pred HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC--CEEEE-EECCC-----CCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 138999749999727899899899999997512546997--19999-81499-----96422200289999999999862
Q 002660 307 FFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNRD-----GIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 307 ~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-vG~~~-----~~~~~~~~~~~~~~~i~~~~~~~ 378 (895)
. ..++++|+++||+++.||++.+++||+++++..+.+ ++.++ ++.+. ++.++..+..++..+++..+...
T Consensus 250 ~--~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~ 327 (456)
T d1uqta_ 250 E--LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQL 327 (456)
T ss_dssp H--TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBT
T ss_pred H--CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 5--28985999937874320658999999999875843146189999748753456889999999999999987652127
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----EEECCCCCCHHCCCCCCCEEEE
Q ss_conf 99996884999998989999998122994999469999996699999990998-----9981888820001049871891
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP-----IVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P-----VIas~~gg~~eii~~~~~g~lv 453 (895)
++.+.+++.+.++.+++.++|+.| |++++||++||||++++|||+||+| +|+|+.+|+.+.+. +|++|
T Consensus 328 ~~~~~v~~~~~~~~~~l~a~~~~A----dv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lV 400 (456)
T d1uqta_ 328 GWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIV 400 (456)
T ss_dssp TBCSEEEECSCCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEE
T ss_pred CCCCEEECCCCCCHHHHHHHHHHH----CEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHC---CEEEE
T ss_conf 987502115876788876777530----54525876578883999999908988897589728978778859---76998
Q ss_pred CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999973-9999999999998885409989999999999981169
Q 002660 454 DPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~~~~~ 507 (895)
||+|++++|++|.++|+ ++++++++.+++++.+.+||+..|++.|++.++++..
T Consensus 401 nP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 455 (456)
T d1uqta_ 401 NPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 455 (456)
T ss_dssp CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 9599999999999997499999999999998999978999999999999875517
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=100.00 E-value=1.9e-35 Score=245.56 Aligned_cols=241 Identities=12% Similarity=0.184 Sum_probs=182.1
Q ss_pred CCEEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECC
Q ss_conf 57699998318999-55169999999999964037975899984999999999998099999999889976885586346
Q 002660 611 RKHIFVISVDCDST-TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 611 ~~kli~~DiDGTL~-~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
++.|||+|+||||. .....+..+++.++++. |+.|+++|||++..+.++++.+++ ..|+++||+||+.|++..
T Consensus 2 ~~~li~~DlDGTL~~~~~~~~~~~~~~~~~~~----g~~v~i~TGR~~~~~~~~~~~~~~--~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQQALEHLQEYLGDRRG----NFYLAYATGRSYHSARELQKQVGL--MEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBSCHHHHHHHHHHHHTTGG----GEEEEEECSSCHHHHHHHHHHHTC--CCCSEEEETTTTEEEETT
T ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC----CCEEEEECCCCHHHHHHHHHHCCC--CCCCEEEECCCEEEEECC
T ss_conf 76699998966679999898999999999819----998999889998999999997399--877658851625999716
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHH
Q ss_conf 88889975336025877510558503999999542101232222577544644236986399999609999962899999
Q 002660 690 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 769 (895)
Q Consensus 690 ~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~ 769 (895)
. .+..|...+...|..+.+..+............ .....+++++...........+++..
T Consensus 76 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (244)
T d1s2oa1 76 G--------LDQHWADYLSEHWQRDILQAIADGFEALKPQSP------------LEQNPWKISYHLDPQACPTVIDQLTE 135 (244)
T ss_dssp E--------ECHHHHHHHHTTCCHHHHHHHHHTCTTEEECCG------------GGCBTTBEEEEECTTSCTHHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH------------HHHCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 7--------416789888788768799999853554332572------------44062689995252115899999999
Q ss_pred HHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 99740571899995188358861199996999999999959984558999567899771000268650899568553200
Q 002660 770 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849 (895)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~ 849 (895)
.+.............+. ++||+|++++||.|+++|++++|++.+++++|||+. | | ++||+.+++||||+||. .+
T Consensus 136 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~-N-D-~~Ml~~~~~~vav~na~--~~ 209 (244)
T d1s2oa1 136 MLKETGIPVQVIFSSGK-DVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSG-N-D-IGLFETSARGVIVRNAQ--PE 209 (244)
T ss_dssp HHHTSSCCEEEEEETTT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSG-G-G-HHHHTSSSEEEECTTCC--HH
T ss_pred HHHHHCCCCEEEECCCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCC-C-C-HHHHHHCCCEEEECCCC--HH
T ss_conf 99863234126630781-899986764155778888774157730379975888-7-7-99996189189967999--99
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 00112699899987768999638806867858999999971854
Q 002660 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 850 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
+|+.|+. ..+...|+|+..+.+||++||+||++|
T Consensus 210 lk~~a~~----------~~~~~~~~~~~~~~~Gi~e~l~~f~~l 243 (244)
T d1s2oa1 210 LLHWYDQ----------WGDSRHYRAQSSHAGAILEAIAHFDFL 243 (244)
T ss_dssp HHHHHHH----------HCCTTEEECSSCHHHHHHHHHHHTTCC
T ss_pred HHHHHHC----------CCCCCEEECCCCCCCHHHHHHHHHCCC
T ss_conf 9998632----------366653771899714899999982867
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=100.00 E-value=3.7e-35 Score=243.65 Aligned_cols=233 Identities=10% Similarity=0.112 Sum_probs=152.1
Q ss_pred EEEEEEECCCC-C---CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 69999831899-9---5516999999999996403797589998499999999999809999999988997688558634
Q 002660 613 HIFVISVDCDS-T---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 613 kli~~DiDGTL-~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
|+||||+|||| + ..+++.+.+++++++++ |+.|++||||++..+..+.+...+. .++++||+||+.|+++
T Consensus 2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~----gi~v~~~TGR~~~~~~~l~~~~~~~--~~~~~I~~nGa~i~~~ 75 (260)
T d2rbka1 2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAK----GLKIFIATGRPKAIINNLSELQDRN--LIDGYITMNGAYCFVG 75 (260)
T ss_dssp CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT----TCEEEEECSSCGGGCCSCHHHHHTT--CCCEEEEGGGTEEEET
T ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHCC--CCCCEEECCCCCCCCC
T ss_conf 299998888871899799899999999999978----8999998899889999999997158--8773476277401257
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH--HHCCCCCC-------------------CCCCCCCCCC-CCCC
Q ss_conf 688889975336025877510558503999999542--10123222-------------------2577544644-2369
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWA--SQVTDKKA-------------------ESGEKVLTPA-EQLS 746 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~-------------------~~~~~~~~~~-~~~~ 746 (895)
++......+ +...... +...+.+.. ........ ....+..... ....
T Consensus 76 ~~~i~~~~l--~~~~~~~---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (260)
T d2rbka1 76 EEVIYKSAI--PQEEVKA---------MAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNK 144 (260)
T ss_dssp TEEEEECCC--CHHHHHH---------HHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTS
T ss_pred CCCCCCCCC--CHHHHHH---------HHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCC
T ss_conf 532104678--8899999---------99999973986899835755413640789999998632576765677673676
Q ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 86399999609999962899999997405718999951883588611999969999999999599845589995678997
Q 002660 747 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 826 (895)
Q Consensus 747 ~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~ 826 (895)
...++.... . ++....+........+..+.+. ++||+|+++|||.||++|++++|++++++++| ||+.|
T Consensus 145 ~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~-~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~-GD~~N- 213 (260)
T d2rbka1 145 EVIQMTPFI-------T-EEEEKEVLPSIPTCEIGRWYPA-FADVTAKGDTKQKGIDEIIRHFGIKLEETMSF-GDGGN- 213 (260)
T ss_dssp CCSEEEECC-------C-HHHHHHHGGGSTTCEEECSSTT-CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEE-ECSGG-
T ss_pred CEEEEEECC-------C-HHHHHHHHHHHCCCCCEEECCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEE-CCCCC-
T ss_conf 469885127-------8-8999999987215540145586-79997488999999999987322357551676-58855-
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 7100026865089956855320000112699899987768999638806867858999999971854
Q 002660 827 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 827 D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
| ++||+.+++||||+||. .++|+.|++ ||.++++|||+++|+||+||
T Consensus 214 D-~~Ml~~a~~svav~na~--~~lk~~A~~-----------------vt~~~~~~Gv~~~l~~~~~~ 260 (260)
T d2rbka1 214 D-ISMLRHAAIGVAMGQAK--EDVKAAADY-----------------VTAPIDEDGISKAMKHFGII 260 (260)
T ss_dssp G-HHHHHHSSEEEECTTSC--HHHHHHSSE-----------------ECCCGGGTHHHHHHHHHTCC
T ss_pred C-HHHHHHCCEEEEECCCC--HHHHHHCCE-----------------EECCCCCCHHHHHHHHHCCC
T ss_conf 5-99998489089958998--999984797-----------------80888756899999985889
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.3e-33 Score=233.66 Aligned_cols=244 Identities=13% Similarity=0.060 Sum_probs=155.8
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+||+|+|||| +..+++.+.+++++|+++ |+.|++||||++..+.+++.++++ .+++|++||+.|++.
T Consensus 1 iKli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~----Gi~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nG~~i~~~ 72 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQRD----GIEVVVSTGRAHFDVMSIFEPLGI----KTWVISANGAVIHDP 72 (285)
T ss_dssp CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHGGGTC----CCEEEEGGGTEEECT
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCC----CCEEEECCCEEEEEC
T ss_conf 909999788664188794199999999999978----899999979998999999998099----858995473169956
Q ss_pred CCCCC-CCCCCCCH-----HHHHHHH--C------C-----CCCCHHHHHHHHH---------------HHHCCCCCCCC
Q ss_conf 68888-99753360-----2587751--0------5-----5850399999954---------------21012322225
Q 002660 689 TLNSE-DGPFVVDF-----YYHSHIE--Y------R-----WGGEGLRKTLVRW---------------ASQVTDKKAES 734 (895)
Q Consensus 689 ~~~~~-~~~~~~d~-----~~~~~i~--~------~-----~~~~~~~~~~~~~---------------~~~~~~~~~~~ 734 (895)
.+... ...+..+. .|..... . . +....+......+ ...........
T Consensus 73 ~~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (285)
T d1nrwa_ 73 EGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFA 152 (285)
T ss_dssp TCCEEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 87435641688899999999999769716874176488606637777777776640574210556533333331014520
Q ss_pred CCCCCCCCCC-CCCCEEEEEEEECCCCCCCHHHHHHHHH--HCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 7754464423-6986399999609999962899999997--405718999951883588611999969999999999599
Q 002660 735 GEKVLTPAEQ-LSTNYCYAFSVQKPGMTPPVKELRKVLR--IQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV 811 (895)
Q Consensus 735 ~~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~l~~~l~--~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi 811 (895)
....+.+... ........+.. ... ..+.+...+. .......+..+.+. ++||+|+++|||.|+++|++++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~ldi~~~~~~K~~ai~~l~~~~gi 227 (285)
T d1nrwa_ 153 YINSFQELFEADEPIDFYNILG-FSF---FKEKLEAGWKRYEHAEDLTLVSSAEH-NFELSSRKASKGQALKRLAKQLNI 227 (285)
T ss_dssp ECSCGGGGTSSSSCCCEEEEEE-ECS---CHHHHHHHHHHHTTCTTEEEECSSTT-EEEEEETTCSHHHHHHHHHHHTTC
T ss_pred EECHHHHHHHCCCCHHHEEEEC-CCC---HHHHHHHHHHHHHCCCCEEEEEECCC-EEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 1031888763145211201311-232---18999999998632797699994796-899955540236689887765055
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf 8455899956789977100026865089956855320000112699899987768999638806867858999999971
Q 002660 812 ELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 812 ~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+++++++|||+. | | ++||+.+++||||+||. .+.|+.|++ +|.++++|||+++|++|
T Consensus 228 ~~~~vi~~GD~~-N-D-~~Ml~~a~~svam~na~--~~~k~~A~~-----------------v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 228 PLEETAAVGDSL-N-D-KSMLEAAGKGVAMGNAR--EDIKSIADA-----------------VTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp CGGGEEEEESSG-G-G-HHHHHHSSEEEECTTCC--HHHHHHCSE-----------------ECCCGGGTHHHHHHHHT
T ss_pred CCCCEEEEECCH-H-H-HHHHHHCCEEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHH
T ss_conf 720499992978-8-8-99998489189968998--999985898-----------------82788755899999986
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.1e-33 Score=229.72 Aligned_cols=239 Identities=12% Similarity=0.110 Sum_probs=155.9
Q ss_pred CEEEEEEECCCCC---CC-HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 7699998318999---55-1699999999999640379758999849999999999980999999998899768855863
Q 002660 612 KHIFVISVDCDST---TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
.|+||||+||||. .. ..+.+.+++++++++ |+.|++||||++..+.++++++++ ..++|++||+.|+.
T Consensus 2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~----gi~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~ 73 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKR----GIKFVVASGNQYYQLISFFPELKD----EISFVAENGALVYE 73 (269)
T ss_dssp CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHH----TCEEEEECSSCHHHHGGGCTTTTT----TSEEEEGGGTEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCC----CCCEEEECEEEEEE
T ss_conf 7999994775672799839969999999999978----998999959998999999998286----66267412169998
Q ss_pred CCCCCCCCCCCCCHHH---HHHHHCCC------------CCCHH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 4688889975336025---87751055------------85039-99999542101232222577544644236986399
Q 002660 688 STLNSEDGPFVVDFYY---HSHIEYRW------------GGEGL-RKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 751 (895)
Q Consensus 688 ~~~~~~~~~~~~d~~~---~~~i~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 751 (895)
.+.......+..+..+ ........ ..+.. ............... ....+. ......+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~ 148 (269)
T d1rlma_ 74 HGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLK---PVKDYQ--EIDDVLFKF 148 (269)
T ss_dssp TTEEEEECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEE---EESCGG--GCCSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCC---CCCCHH--HHCCHHEEE
T ss_conf 990899732665888999999986248429998157368846881889999875234552---025376--622102477
Q ss_pred EEEEECCCCCCCHHHHHHHHHH-CCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
Q ss_conf 9996099999628999999974-057189999518835886119999699999999995998455899956789977100
Q 002660 752 AFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEG 830 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~e 830 (895)
..... . ....++.+.+.. .......+.+... ++||+|+++|||.|+++|++++|++++++++|||+ .| | ++
T Consensus 149 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~-~N-D-~~ 220 (269)
T d1rlma_ 149 SLNLP-D---EQIPLVIDKLHVALDGIMKPVTSGFG-FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDS-GN-D-AE 220 (269)
T ss_dssp EEECC-G---GGHHHHHHHHHHHTTTSSEEEECSTT-EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GG-G-HH
T ss_pred EECCC-H---HHHHHHHHHHHHHHHCCEEEEEECCC-EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCC-CC-H-HH
T ss_conf 75088-8---99999999999985153389997582-68884586577788887766502142418999088-44-1-99
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf 026865089956855320000112699899987768999638806867858999999971
Q 002660 831 LLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 831 Ml~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
||+.+++||||+||. .++|..|++ ||.++++|||+++|+++
T Consensus 221 Ml~~ag~~vam~Na~--~~lk~~A~~-----------------v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 221 MLKMARYSFAMGNAA--ENIKQIARY-----------------ATDDNNHEGALNVIQAV 261 (269)
T ss_dssp HHHHCSEEEECTTCC--HHHHHHCSE-----------------ECCCGGGTHHHHHHHHH
T ss_pred HHHHCCEEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHH
T ss_conf 998589189958998--999984788-----------------81889845999999999
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.8e-33 Score=228.15 Aligned_cols=244 Identities=10% Similarity=0.087 Sum_probs=157.3
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|+||+|||| +..+++.+++++++|+++ |+.|+|||||++..+.++++++++. ..++++|++||+.++..
T Consensus 4 iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~----gi~v~i~TGR~~~~~~~~~~~l~l~-~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 4 IKLIAIDMDGTLLLPDHTISPAVKNAIAAARAR----GVNVVLTTGRPYAGVHNYLKELHME-QPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCGGGTHHHHHHTTCC-STTCEEEEGGGTEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC-CCCCEEEECCCEEEECC
T ss_conf 069999577664389795199999999999978----9999999899989999999984676-89858998685167506
Q ss_pred CCCCCCCCCCCCHHHHHHH-------HCCC------------CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 6888899753360258775-------1055------------85039999995421012322225775446442369863
Q 002660 689 TLNSEDGPFVVDFYYHSHI-------EYRW------------GGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNY 749 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~i-------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (895)
...........+......+ ...+ ...........+........ .............
T Consensus 79 ~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 153 (271)
T d1rkqa_ 79 ADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVF-----CEAEKMDPNTQFL 153 (271)
T ss_dssp TTCCEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEE-----CCGGGSCTTCCBC
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCC-----CHHHHCCCCCCEE
T ss_conf 77708985020077888878888861640788731327740566116777777640576100-----3165507655458
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHH-CCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
Q ss_conf 999996099999628999999974-0571899995188358861199996999999999959984558999567899771
Q 002660 750 CYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDY 828 (895)
Q Consensus 750 k~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~ 828 (895)
+..+ ..++. ...+..+.+.. ......+..+.+. ++||.|+++|||.|+++|+++++++.+++++||| +.| |
T Consensus 154 ~~~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD-~~N-D- 225 (271)
T d1rkqa_ 154 KVMM-IDEPA---ILDQAIARIPQEVKEKYTVLKSAPY-FLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGD-QEN-D- 225 (271)
T ss_dssp EEEE-ECCHH---HHHHHHHHSCHHHHHHEEEEEEETT-EEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGG-G-
T ss_pred EEEE-ECCHH---HHHHHHHHHHHHHHCCEEEEEECCC-EEEECCCCCCCCCCCCEEHHHCCCCHHCEEEEEC-CHH-H-
T ss_conf 9999-46777---8999999999985056389995472-6885278887654200001100114201799918-676-7-
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 0002686508995685532000011269989998776899963880686785899999997185
Q 002660 829 EGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 829 ~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
++||+.+++||||+||. .++|..|++ ||+++.+|||+++|++|-|
T Consensus 226 ~~ml~~~~~~~am~na~--~~lk~~a~~-----------------i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 226 IAMIEYAGVGVAVDNAI--PSVKEVANF-----------------VTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp HHHHHHSSEEEECTTSC--HHHHHHCSE-----------------ECCCTTTTHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHHHC
T ss_conf 99998589189967987--999985898-----------------8388985839999999847
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.9e-32 Score=223.95 Aligned_cols=238 Identities=13% Similarity=0.117 Sum_probs=154.3
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|+||+|||| .+.+++.++++++++++. + .+++||||++..+.+.+.+++.. +.++||+||+.|+..
T Consensus 2 ~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~----~-~~~i~TGR~~~~~~~~~~~~~~~---~~~~I~~nGa~i~~~ 73 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRK----C-YVVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVYLP 73 (267)
T ss_dssp BCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTT----S-EEEEECSSCHHHHHHHHHHHSSS---CCCEEEGGGTEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCC---CCCEECCCCEEEEEC
T ss_conf 499999177565489594499999999999749----9-79998999858889999984656---773113698289954
Q ss_pred CCCCCCCCCCCCHHHHHH-H------H--------CCC----CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 688889975336025877-5------1--------055----85039999995421012322225775446442369863
Q 002660 689 TLNSEDGPFVVDFYYHSH-I------E--------YRW----GGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNY 749 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~-i------~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (895)
+++......+ +..+... + . ..| ....+..... ......... .............
T Consensus 74 ~~~~i~~~~i-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~ 146 (267)
T d1nf2a_ 74 EEGVILNEKI-PPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYAR-HSNVDYRVE-----PNLSELVSKMGTT 146 (267)
T ss_dssp TTEEEEECCB-CHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHH-HTTCCEEEC-----TTHHHHHHHHCBS
T ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHH-HCCCCCEEC-----CCHHHHHHHCCCE
T ss_conf 6664324579-98999999999973384278740766886277488898988-607872204-----7688874411623
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHC-CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
Q ss_conf 9999960999996289999999740-571899995188358861199996999999999959984558999567899771
Q 002660 750 CYAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDY 828 (895)
Q Consensus 750 k~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~ 828 (895)
++.+.. ++ ...+++.+.+... .....+..+.+. ++||+|+++|||.||++|++++|++.+++++| ||+.| |
T Consensus 147 ~i~~~~-~~---~~~~~~~~~l~~~~~~~~~~~~~~~~-~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~-GD~~N-D- 218 (267)
T d1nf2a_ 147 KLLLID-TP---ERLDELKEILSERFKDVVKVFKSFPT-YLEIVPKNVDKGKALRFLRERMNWKKEEIVVF-GDNEN-D- 218 (267)
T ss_dssp EEEEEC-CH---HHHHHHHHHHHHHHTTTSEEEEEETT-EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEE-ECSHH-H-
T ss_pred EEEEEC-CH---HHHHHHHHHHHHHHCCCEEEEEEECC-EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE-CCCCC-H-
T ss_conf 788845-59---99999999998860783899996211-45655877751678999988603682208998-08844-0-
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHC
Q ss_conf 000268650899568553200001126998999877689996388068678589999999718
Q 002660 829 EGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 829 ~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
++||+.+++||||+||. .+.|+.|++ ||.+++++||+++|+++-
T Consensus 219 ~~ml~~~~~sva~~na~--~~~k~~A~~-----------------i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 219 LFMFEEAGLRVAMENAI--EKVKEASDI-----------------VTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp HHHHTTCSEEEECTTSC--HHHHHHCSE-----------------ECCCTTTTHHHHHHTTBC
T ss_pred HHHHHHCCCEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHHH
T ss_conf 99998689089948998--999985898-----------------858887538999999998
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=3.2e-29 Score=204.85 Aligned_cols=220 Identities=12% Similarity=0.151 Sum_probs=156.1
Q ss_pred CEEEEEEECCCCC---CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 7699998318999---5516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+++||+||||+ ..+++.+.++++.++++ |+.|+++|||++..+..+...+++. ..+|+.||+.++..
T Consensus 3 iKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~----g~~v~~~TGr~~~~~~~~~~~~~~~----~~~i~~~G~~~~~~ 74 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKK----GLTVSLLSGNVIPVVYALKIFLGIN----GPVFGENGGIMFDN 74 (225)
T ss_dssp CCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEECT
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC----CEEEEECCEEEEEC
T ss_conf 089999658877389994799999999999877----9989998288603269999981988----52886041699967
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH
Q ss_conf 68888997533602587751055850399999954210123222257754464423698639999960999996289999
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 768 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~ 768 (895)
... +...+..+.....+........... .. ..........+.. + ....+.+.
T Consensus 75 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~-~---~~~~~~~~ 126 (225)
T d1l6ra_ 75 DGS---------------IKKFFSNEGTNKFLEEMSKRTSMRS-------IL--TNRWREASTGFDI-D---PEDVDYVR 126 (225)
T ss_dssp TSC---------------EEESSCSHHHHHHHHHHTTTSSCBC-------CG--GGGGCSSSEEEBC-C---GGGHHHHH
T ss_pred CCC---------------EEEECCHHHHHHHHHHHHHHCCCCE-------EE--CCCCEEEEECCCC-C---HHHHHHHH
T ss_conf 951---------------7873686899999999987348542-------42--0322023100235-8---99999999
Q ss_pred HHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 99974057189999518835886119999699999999995998455899956789977100026865089956855320
Q 002660 769 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848 (895)
Q Consensus 769 ~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~ 848 (895)
..+.... ..+ ...+. .+|++|+++|||.|+++|++++|++++++++| ||+.| | ++||+.++.+|||+||. .
T Consensus 127 ~~~~~~~--~~i-~~~~~-~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~-GDs~n-D-~~m~~~a~~~vav~na~--~ 197 (225)
T d1l6ra_ 127 KEAESRG--FVI-FYSGY-SWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNN-D-MPMFQLPVRKACPANAT--D 197 (225)
T ss_dssp HHHHTTT--EEE-EEETT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEE-CCSGG-G-HHHHTSSSEEEECTTSC--H
T ss_pred HHHHHCC--CEE-EECCC-EEEECCCCCCHHHHHHHHHHHHCCCHHHEEEE-CCCCC-H-HHHHHHCCEEEEECCCC--H
T ss_conf 9874257--299-98891-79963876522789998766510023022564-48843-5-99999779089988975--9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 000112699899987768999638806867858999999971854
Q 002660 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 849 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
++|..|++ ||+.+..+||+++|++|+||
T Consensus 198 ~~k~~ad~-----------------v~~~~~~~gi~~~l~~~~l~ 225 (225)
T d1l6ra_ 198 NIKAVSDF-----------------VSDYSYGEEIGQIFKHFELM 225 (225)
T ss_dssp HHHHHCSE-----------------ECSCCTTHHHHHHHHHTTCC
T ss_pred HHHHHCCE-----------------EECCCCCCHHHHHHHHHCCC
T ss_conf 99984999-----------------98989848899999986789
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.96 E-value=3.1e-28 Score=198.49 Aligned_cols=222 Identities=12% Similarity=0.052 Sum_probs=150.3
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|+||+|||| ...+++.+++++++++++ |+.|+++|||++..+...+..+++. +.+|++||+.+++.
T Consensus 2 iK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~----gi~v~~~TGR~~~~~~~~~~~~~~~----~~~i~~~g~~~~~~ 73 (230)
T d1wr8a_ 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESL----GIPIMLVTGNTVQFAEAASILIGTS----GPVVAEDGGAISYK 73 (230)
T ss_dssp CCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEEET
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHCCCC----CCCCCCCCEEEECC
T ss_conf 369999167777379894699999999999867----9959999278688899999864887----32001222010024
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH
Q ss_conf 68888997533602587751055850399999954210123222257754464423698639999960999996289999
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 768 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~ 768 (895)
......... +..+ .....+...++...... ... .....+.+ ..... ..+.++
T Consensus 74 ~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~-~~~~~---~~~~~~ 125 (230)
T d1wr8a_ 74 KKRIFLASM--DEEW----------ILWNEIRKRFPNARTSY---------TMP---DRRAGLVI-MRETI---NVETVR 125 (230)
T ss_dssp TEEEESCCC--SHHH----------HHHHHHHHHCTTCCBCT---------TGG---GCSSCEEE-CTTTS---CHHHHH
T ss_pred CCCCCCCCC--CHHH----------HHHHHHHHHCCCCCCEE---------ECC---CCEEEEEE-ECCCC---CHHHHH
T ss_conf 210002344--1889----------99999998626654214---------414---42245899-34611---699999
Q ss_pred HHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 99974057189999518835886119999699999999995998455899956789977100026865089956855320
Q 002660 769 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848 (895)
Q Consensus 769 ~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~ 848 (895)
+.+........ ..+.+. .+||+|.++||+.|++++++++|++++++++|| |+.| | ++||+.++.||||+||. .
T Consensus 126 ~~~~~~~~~~~-~~~~~~-~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iG-D~~N-D-i~ml~~ag~~vav~na~--~ 198 (230)
T d1wr8a_ 126 EIINELNLNLV-AVDSGF-AIHVKKPWINKGSGIEKASEFLGIKPKEVAHVG-DGEN-D-LDAFKVVGYKVAVAQAP--K 198 (230)
T ss_dssp HHHHHTTCSCE-EEECSS-CEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEE-CSGG-G-HHHHHHSSEEEECTTSC--H
T ss_pred HHHHHHCCCEE-EEECCC-EEEEEECCCCCCHHHCCCCCCCCCCHHHEEEEE-CCCC-H-HHHHHHCCEEEEECCCC--H
T ss_conf 99998366528-960894-899940776761332011211001332425662-6730-7-99999789079988987--9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHH----HCCC
Q ss_conf 00011269989998776899963880686785899999997----1854
Q 002660 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQ----LGLL 893 (895)
Q Consensus 849 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~----~~li 893 (895)
++|+.|++ ||.+++++||++++++ +|+|
T Consensus 199 ~~k~~A~~-----------------v~~~~~~~gv~~~i~~~l~~~g~~ 230 (230)
T d1wr8a_ 199 ILKENADY-----------------VTKKEYGEGGAEAIYHILEKFGYL 230 (230)
T ss_dssp HHHTTCSE-----------------ECSSCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCE-----------------EECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 99985799-----------------989998478999999999972899
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.96 E-value=2.3e-28 Score=199.32 Aligned_cols=241 Identities=10% Similarity=0.064 Sum_probs=153.7
Q ss_pred CCCCEEEEEEECCCCC----CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC--CCCCEEEECCC
Q ss_conf 3557699998318999----55169999999999964037975899984999999999998099999--99988997688
Q 002660 609 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP--SDFDAFICNSG 682 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~--~~~d~~I~~nG 682 (895)
.+..|+||||+||||. ..+++.++++|++|+++ |+.|+|||||++..+.++++++++.. ......|+.||
T Consensus 7 ~~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~----Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g 82 (283)
T d2b30a1 7 GADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEK----GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYING 82 (283)
T ss_dssp TCCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHH----TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGG
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf 3596199998888884898996799999999999988----998999869998999999998476654555774378754
Q ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC------C-CCCCC-----------------CCCCC
Q ss_conf 558634688889975336025877510558503999999542101------2-32222-----------------57754
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV------T-DKKAE-----------------SGEKV 738 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~------~-~~~~~-----------------~~~~~ 738 (895)
+.++........... .+. .....++..+.... . ..... .....
T Consensus 83 ~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (283)
T d2b30a1 83 TIVYDQIGYTLLDET-IET------------DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSI 149 (283)
T ss_dssp TEEECTTCCEEEECC-CCH------------HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCE
T ss_pred EEEECCCCCEEEECC-CCH------------HHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 589848996831025-687------------8889999887750665158997323068704632778888874116553
Q ss_pred CCC---CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHC-CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 464---423698639999960999996289999999740-5718999951883588611999969999999999599845
Q 002660 739 LTP---AEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELS 814 (895)
Q Consensus 739 ~~~---~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~ 814 (895)
... ........++.+.. +.. ..+++...+... .....+..+... ++||.|+++|||.|++.|+++++++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~~l~~l~~~~~i~~~ 224 (283)
T d2b30a1 150 IIRHNEMLKYRTMNKLMIVL-DPS---ESKTVIGNLKQKFKNKLTIFTTYNG-HAEVTKLGHDKYTGINYLLKHYNISND 224 (283)
T ss_dssp EECHHHHTTCCCCSEEEECC-CTT---THHHHHHHHHHHSTTTEEEEECTTS-CEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred CCCHHHHHHCCCCEEEEEEC-CHH---HHHHHHHHHHHHHCCCCEEEEECCE-EEEECCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 36677774026613899966-889---9999999999984566137885240-676247765057788877664100202
Q ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC-CCHHHHHHHHHHHCCC
Q ss_conf 589995678997710002686508995685532000011269989998776899963880686-7858999999971854
Q 002660 815 KMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPED-CTTSDIRSSLEQLGLL 893 (895)
Q Consensus 815 ~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~-~~~dGI~~al~~~~li 893 (895)
++++|||+ .| | ++||+.+++||||+||. .++|..|++ ||.+ ++++||+++|+++--|
T Consensus 225 ~vi~~GD~-~N-D-~~Ml~~a~~~va~~na~--~~~k~~a~~-----------------v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 225 QVLVVGDA-EN-D-IAMLSNFKYSFAVANAT--DSAKSHAKC-----------------VLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp GEEEEECS-GG-G-HHHHHSCSEEEECTTCC--HHHHHHSSE-----------------ECSSCTTTTHHHHHHHHHHTT
T ss_pred EEEEECCC-HH-H-HHHHHHCCCEEEECCCC--HHHHHHCCE-----------------EECCCCCCCHHHHHHHHHHCC
T ss_conf 07996487-63-6-99998589189968998--999984899-----------------999848886999999999737
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.94 E-value=1.9e-28 Score=199.88 Aligned_cols=221 Identities=14% Similarity=0.055 Sum_probs=129.3
Q ss_pred CEEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCC
Q ss_conf 769999831899-9551699999999999640379758999849999999999980999999998899768855863468
Q 002660 612 KHIFVISVDCDS-TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 612 ~kli~~DiDGTL-~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
.|+||+|+|||| +...++.+++++++++++ |+.|++||||++..+.++++++++ .+++|++||+.|++.+.
T Consensus 2 iKli~~DlDGTLl~~~~~~~~~~ai~~l~~~----G~~~~~aTGR~~~~~~~~~~~~~~----~~~~i~~nGa~i~~~~~ 73 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGYEPDPAKPIIEELKDM----GFEIIFNSSKTRAEQEYYRKELEV----ETPFISENGSAIFIPKG 73 (243)
T ss_dssp EEEEEECCBTTTBSSSCSGGGHHHHHHHHHT----TEEEEEECSSCHHHHHHHHHHHTC----CSCEEETTTTEEEECTT
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHHCC----CCCCCCCCCCEEECCCC
T ss_conf 3799992777778999888999999999988----999999919888999999998364----42100147848970898
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC-------CCCCC--CCC-CCCCCEEEEEEEECCCC
Q ss_conf 888997533602587751055850399999954210123222257-------75446--442-36986399999609999
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-------EKVLT--PAE-QLSTNYCYAFSVQKPGM 760 (895)
Q Consensus 691 ~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~-~~~~~~k~~~~~~~~~~ 760 (895)
.......................+.+...+............... ..... ... .....+...... ..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 150 (243)
T d1wzca1 74 YFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFE--WS- 150 (243)
T ss_dssp CCC----------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECB--CS-
T ss_pred CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH--HH-
T ss_conf 430354306778899998752199999999765531121003134488887762476467788886313411344--44-
Q ss_pred CCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf 9628999999974057189999518835886119999699999999995-998455899956789977100026865089
Q 002660 761 TPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 761 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~-gi~~~~~iaf~gd~nd~D~~eMl~~~~~gV 839 (895)
.....+ ...... . ....+. .++++|++++|+.|++.+++++ +++++++++|||+. | | ++||+.+++||
T Consensus 151 ~~~~~~---~~~~~~--~--~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~-N-D-~~Ml~~a~~~v 219 (243)
T d1wzca1 151 RDGWEE---VLVEGG--F--KVTMGS-RFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSY-N-D-FPMFEVVDKVF 219 (243)
T ss_dssp SSCHHH---HHHHTT--C--EEEECS-SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSG-G-G-HHHHTTSSEEE
T ss_pred HHHHHH---HHHHCC--E--EEEECC-CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCH-H-H-HHHHHCCCCEE
T ss_conf 678998---655237--6--884236-5300103110077999999983599914199984988-5-8-99998499389
Q ss_pred EECCCCCCCCCCCCCCC
Q ss_conf 95685532000011269
Q 002660 840 ILKGICSSSSNQIHANR 856 (895)
Q Consensus 840 aMgNa~~~~~~~~~a~~ 856 (895)
|||||. .+.++.++.
T Consensus 220 a~~Na~--~~~~~~~~~ 234 (243)
T d1wzca1 220 IVGSLK--HKKAQNVSS 234 (243)
T ss_dssp EESSCC--CTTCEEESC
T ss_pred EECCCC--HHHHHHHHH
T ss_conf 927998--688702318
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=2.5e-25 Score=179.44 Aligned_cols=193 Identities=25% Similarity=0.298 Sum_probs=151.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCE
Q ss_conf 9989997789999998778999999999994168864213899974999972789-989989999999751254699719
Q 002660 269 GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD-PKKNITTLVKAFGECRPLRELANL 347 (895)
Q Consensus 269 Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~-~~Kgi~~ll~A~~~l~~~~~~~~l 347 (895)
|||.+.|.+..... .........+++++. +++++|+++||+. ++||++.+++|++.+......+++
T Consensus 1 gid~~~~~~~~~~~------------~~~~~~~~~~~~~~l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~ 67 (196)
T d2bfwa1 1 GIDCSFWNESYLTG------------SRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM 67 (196)
T ss_dssp CCCTTTSSGGGSCS------------CHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE
T ss_pred CCCHHHCCCCCCCC------------HHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 91813308988870------------168999999999597-99988999768881104999999998864112578881
Q ss_pred EE-EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 99-98149996422200289999999999862999968849999989899999981229949994699999966999999
Q 002660 348 TL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 426 (895)
Q Consensus 348 ~l-ivG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~ 426 (895)
.+ ++|.++. .+...+..+... +...+.+.+.++.+++..+|+.| |++|+||..|++|++++|||
T Consensus 68 ~l~i~G~g~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~----di~v~ps~~e~~~~~~~Eam 132 (196)
T d2bfwa1 68 RFIIIGKGDP---------ELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSV----DFVIIPSYFEPFGLVALEAM 132 (196)
T ss_dssp EEEEECCBCH---------HHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTC----SEEEECCSCCSSCHHHHHHH
T ss_pred EEEEEEECCC---------CHHHHHHHHHHC--CCEEEEEEECCCCCCCHHCCCCC----CCCCCCCCCCCCCCCCHHHH
T ss_conf 8999961355---------213454332211--31157753023321100001232----33443222112332201333
Q ss_pred HCCCCEEECCCCCCHHCCCCCCCEEEECCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCC
Q ss_conf 90998998188882000104987189199999999999999973-99999999999988854099
Q 002660 427 AHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFS 490 (895)
Q Consensus 427 a~G~PVIas~~gg~~eii~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s 490 (895)
+||+|||+++.|+..|++.+ .+|++++|+|+++++++|.+++. +++.+.+++++++++++.||
T Consensus 133 ~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 133 CLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 14860465178853201028-73146789999999999999995799999999999999998378
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=5e-25 Score=177.49 Aligned_cols=186 Identities=13% Similarity=0.121 Sum_probs=108.8
Q ss_pred EEEEEECCCCC--------CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 99998318999--------5516999999999996403797589998499999999999809999999988997688558
Q 002660 614 IFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 614 li~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I 685 (895)
|||||+||||. ..+++.++++|++|++. +.|+|||||++..+.... +. +++++|+||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~-----~~v~i~TGR~~~~l~~~~---~~----~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-----FDTYIVTGRSPEEISRFL---PL----DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-----SEEEEECSSCHHHHHHHS---CS----SCEEEEGGGTEE
T ss_pred EEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHC-----CCEEEECCCCHHHHHHHC---CC----CCCEEECCEEEE
T ss_conf 899995577789978965488999999999998509-----978999699879966434---76----662896470898
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCH-
Q ss_conf 6346888899753360258775105585039999995421012322225775446442369863999996099999628-
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV- 764 (895)
Q Consensus 686 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~- 764 (895)
+..+.............|. +.+...+........... .....+...+.+.... ....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~ 127 (229)
T d1u02a_ 70 KINGQIVYNNGSDRFLGVF---------DRIYEDTRSWVSDFPGLR------------IYRKNLAVLYHLGLMG-ADMKP 127 (229)
T ss_dssp EETTEEEECTTGGGGHHHH---------HHHHHHHTTHHHHSTTCE------------EEEETTEEEEECTTSC-STTHH
T ss_pred ECCCCEEEECCHHHHHHHH---------HHHHHHHHHHHCCCCCCE------------ECCCCCCEEEEEHHHH-HHHHH
T ss_conf 3499346623305449999---------999998677650667721------------0355421342203332-44579
Q ss_pred ---HHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf ---99999997405718999951883588611999969999999999599845589995678997710002686508995
Q 002660 765 ---KELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 765 ---~~l~~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaM 841 (895)
+.+.+.+.... . .+.+.. .++||+|+|+|||+||++|+++ +++++| ||+.| | ++||+.++.|++|
T Consensus 128 ~~~~~l~~~~~~~~--~-~~~~~~-~~idi~p~g~~Kg~al~~l~~~-----~~~i~~-GDs~N-D-~~Mf~~~~~~~av 195 (229)
T d1u02a_ 128 KLRSRIEEIARIFG--V-ETYYGK-MIIELRVPGVNKGSAIRSVRGE-----RPAIIA-GDDAT-D-EAAFEANDDALTI 195 (229)
T ss_dssp HHHHHHHHHHHHHT--C-EEEECS-SEEEEECTTCCHHHHHHHHHTT-----SCEEEE-ESSHH-H-HHHHHTTTTSEEE
T ss_pred HHHHHHHHHHHCCC--E-EEEEEC-EEEEEECCCCCHHHHHHHHHCC-----CCCEEE-CCCCC-H-HHHHHCCCCEEEE
T ss_conf 99999999852387--6-999602-1899736989889999997440-----445664-38887-0-9999602882899
Q ss_pred CCCC
Q ss_conf 6855
Q 002660 842 KGIC 845 (895)
Q Consensus 842 gNa~ 845 (895)
+|+.
T Consensus 196 ~~g~ 199 (229)
T d1u02a_ 196 KVGE 199 (229)
T ss_dssp EESS
T ss_pred EECC
T ss_conf 9689
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=9.9e-25 Score=175.56 Aligned_cols=212 Identities=13% Similarity=0.056 Sum_probs=122.7
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
..|||+|+|||| ...+++.+++++++++++ |+.|++||||++.++.+.+.++++. +.++||+||+.|+..
T Consensus 4 ~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~i~TGR~~~~~~~~~~~~~~~---~~~~i~~nGa~i~~~ 76 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREA----NVPVILCSSKTSAEMLYLQKTLGLQ---GLPLIAENGAVIQLA 76 (232)
T ss_dssp CEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHTTCT---TSCEEEGGGTEEECC
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHCHHHHHHHCCC---CCEEECCCCEEEEEC
T ss_conf 879999788875289694799999999999977----9989999689736530688873457---845971697699935
Q ss_pred CCCCCCCCC--CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC------CCCCC---CCCCCCCCEEEEEEEEC
Q ss_conf 688889975--33602587751055850399999954210123222257------75446---44236986399999609
Q 002660 689 TLNSEDGPF--VVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG------EKVLT---PAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 689 ~~~~~~~~~--~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~k~~~~~~~ 757 (895)
......... .........+.. ......... ........... ..... ........+.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 149 (232)
T d1xvia_ 77 EQWQEIDGFPRIISGISHGEISL-----VLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR- 149 (232)
T ss_dssp TTCTTSTTTTEEECSSCHHHHHH-----HHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH-----HHHHHHHHH-CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCC-
T ss_conf 77531201455555778999987-----654222220-21212332023555433310230134554411124531022-
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHH---HCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 999962899999997405718999951883588611999969999999999---59984558999567899771000268
Q 002660 758 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLR---WGVELSKMVVFVGESGDTDYEGLLGG 834 (895)
Q Consensus 758 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~---~gi~~~~~iaf~gd~nd~D~~eMl~~ 834 (895)
.. ............... . ....... .+|++|++++||.|++.|++. +|++.+++++|||+. | | ++||+.
T Consensus 150 ~~-~~~~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~-N-D-l~Ml~~ 221 (232)
T d1xvia_ 150 DS-DERMAQFTARLNELG--L-QFMQGAR-FWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGP-N-D-APLLEV 221 (232)
T ss_dssp SC-HHHHHHHHHHHHHTT--E-EEEECSS-CEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSG-G-G-HHHHHT
T ss_pred CC-HHHHHHHHHHHHHCC--C-EEEECCC-EEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEECCCH-H-H-HHHHHH
T ss_conf 52-999988998765305--5-0332253-022147885178999999999997598952199984978-6-8-999981
Q ss_pred CCEEEEECCCC
Q ss_conf 65089956855
Q 002660 835 VHKTVILKGIC 845 (895)
Q Consensus 835 ~~~gVaMgNa~ 845 (895)
+++||||.||.
T Consensus 222 a~~~vaV~n~~ 232 (232)
T d1xvia_ 222 MDYAVIVKGLN 232 (232)
T ss_dssp SSEEEECCCCC
T ss_pred CCEEEEEECCC
T ss_conf 99089971899
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=7.6e-23 Score=163.22 Aligned_cols=214 Identities=13% Similarity=0.006 Sum_probs=114.0
Q ss_pred EEEE-EEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH-HHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6999-9831899---95516999999999996403797589998499999999999-80999999998899768855863
Q 002660 613 HIFV-ISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL-VSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 613 kli~-~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l-~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
|+|+ ||+|||| .+.+++.+++++++++++ |+.+ ++|||++..+...+ +.+++. ..+.+++++||+.++.
T Consensus 1 k~i~lFDlDGTLl~~~~~is~~~~~~i~~l~~~----g~~~-i~tgrr~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 74 (244)
T d2fuea1 1 RVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR----VQIG-VVGGSDYCKIAEQLGDGDEVI-EKFDYVFAENGTVQYK 74 (244)
T ss_dssp CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT----SEEE-EECSSCHHHHHHHHSSTTTHH-HHCSEEEEGGGTEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEE-EEECCCHHHHHHHHHHHHCCC-CCCCEEECCCCEEECC
T ss_conf 979998445683499895899999999999868----9999-996698065134566542334-5542231144002303
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC-----
Q ss_conf 468888997533602587751055850399999954210123222257754464423698639999960999996-----
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP----- 762 (895)
Q Consensus 688 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~----- 762 (895)
.+.. .....+............................ ............ .+.........
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 140 (244)
T d2fuea1 75 HGRL------LSKQTIQNHLGEELLQDLINFCLSYMALLRLPKK------RGTFIEFRNGML--NISPIGRSCTLEERIE 140 (244)
T ss_dssp TTEE------CCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC------CSCSEEECSSCE--EECSSCTTCCHHHHHH
T ss_pred CCCC------CEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC------CCCHHHHHHHHH--HCCCCCCCCCHHHHHH
T ss_conf 7851------2120135777666777777642333101102211------242123444442--0232233320345456
Q ss_pred ---------CHHHHHHHHH-H-CCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCC---CCCCC
Q ss_conf ---------2899999997-4-05718999951883588611999969999999999599845589995678---99771
Q 002660 763 ---------PVKELRKVLR-I-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES---GDTDY 828 (895)
Q Consensus 763 ---------~~~~l~~~l~-~-~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~---nd~D~ 828 (895)
...+....+. . ......+..+... ++||+|+++|||+||++|++ ++.+++++|||+. .| |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~N-D- 214 (244)
T d2fuea1 141 FSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI-SFDVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGN-D- 214 (244)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSSS-CEEEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTST-T-
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC-CCEECCHHCCHHHHHHHHHC---CCHHHEEEECCCCCCCCC-C-
T ss_conf 66530010367888999998851034267641676-00320322027899999966---984459998688999997-2-
Q ss_pred CCCCCCCC-EEEEECCCCCCCCCCCCC
Q ss_conf 00026865-089956855320000112
Q 002660 829 EGLLGGVH-KTVILKGICSSSSNQIHA 854 (895)
Q Consensus 829 ~eMl~~~~-~gVaMgNa~~~~~~~~~a 854 (895)
++||+.++ .|+||+||. ++.|..+
T Consensus 215 ~eml~~a~~~~~av~na~--~~~k~~~ 239 (244)
T d2fuea1 215 FEIFADPRTVGHSVVSPQ--DTVQRCR 239 (244)
T ss_dssp HHHHHSTTSEEEECSSHH--HHHHHHH
T ss_pred HHHHHCCCCCEEECCCHH--HHHHHHH
T ss_conf 999971798589918989--9999999
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=4.3e-21 Score=151.81 Aligned_cols=155 Identities=23% Similarity=0.299 Sum_probs=123.3
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 97499997278998998999999975125469971999981499964222002899999999998629999688499999
Q 002660 312 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHK 391 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~ 391 (895)
....++++||+.+.||++.+++|+..++ ..++ +++|.+.+.... ..+...+.... .++|.|+|+++
T Consensus 11 ~~~~~l~iGrl~~~K~~~~~i~a~~~l~----~~~l-~ivg~~~~~~~~--------~~~~~~~~~~~-~~~v~~~g~~~ 76 (166)
T d2f9fa1 11 YGDFWLSVNRIYPEKRIELQLEVFKKLQ----DEKL-YIVGWFSKGDHA--------ERYARKIMKIA-PDNVKFLGSVS 76 (166)
T ss_dssp CCSCEEEECCSSGGGTHHHHHHHHHHCT----TSCE-EEEBCCCTTSTH--------HHHHHHHHHHS-CTTEEEEESCC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHC----CCEE-EEEEECCCCCCH--------HHHHHHHCCCC-CCCEEEEECCC
T ss_conf 9999999923754349999999999833----9749-999722445422--------33332202356-67588742122
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHCCCCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 89899999981229949994699999966999999909989981888820001049871891999999999999999739
Q 002660 392 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD 471 (895)
Q Consensus 392 ~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~~~~g~lv~p~d~~~la~ai~~ll~~ 471 (895)
.+++..+|+.| |++++||..|++|++++|||+||+|||+++.++..|++.++.+|+++++ |+++++++|.+++++
T Consensus 77 ~~~~~~~~~~a----d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~~ 151 (166)
T d2f9fa1 77 EEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSKN 151 (166)
T ss_dssp HHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHC
T ss_conf 11122222222----2233212211233221101122332205527864033048841246899-999999999999809
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999888540
Q 002660 472 KQLWARCRQNGLKNIHL 488 (895)
Q Consensus 472 ~~~~~~~~~~~~~~~~~ 488 (895)
++.. ++++.+.+++
T Consensus 152 ~~~~---~~~~~~~a~~ 165 (166)
T d2f9fa1 152 PDKF---KKDCFRRAKE 165 (166)
T ss_dssp TTTT---HHHHHHHHHT
T ss_pred HHHH---HHHHHHHHHC
T ss_conf 9999---9999999857
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.8e-21 Score=154.24 Aligned_cols=213 Identities=12% Similarity=0.039 Sum_probs=116.2
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 769999831899---95516999999999996403797589998499999999999809999999988997688558634
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.||++||+|||| .+.+++.+++++++++++ |+ ++++|||++..+...+.+.... .+.++++++|+.++..
T Consensus 3 ~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~----g~-~~i~Tgr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 75 (243)
T d2amya1 3 PALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK----IK-IGVVGGSDFEKVQEQLGNDVVE--KYDYVFPENGLVAYKD 75 (243)
T ss_dssp SEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT----SE-EEEECSSCHHHHHHHHCTTHHH--HCSEEESGGGTEEEET
T ss_pred CEEEEECCCCCEECCCCCCCHHHHHHHHHHHCC----CC-EEEECCCCHHHHHHHHHHHCCC--CCEEEECCCEEEEECC
T ss_conf 879998674782089994899999999999809----98-9999589868867887652165--6429952747999338
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-------
Q ss_conf 6888899753360258775105585039999995421012322225775446442369863999996099999-------
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT------- 761 (895)
Q Consensus 689 ~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~------- 761 (895)
++ ................................... ...... .......+........
T Consensus 76 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 141 (243)
T d2amya1 76 GK------LLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKK------RGTFIE--FRNGMLNVSPIGRSCSQEERIEF 141 (243)
T ss_dssp TE------EEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCC------CSCSEE--EETTEEEECSSCTTCCHHHHHHH
T ss_pred CC------CCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCC------CCCHHH--HHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 85------11100012888888988887640001000145312------220223--10112112222223542330123
Q ss_pred -------CCHHHHHHHHHHC--CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC---CCCCCCC
Q ss_conf -------6289999999740--571899995188358861199996999999999959984558999567---8997710
Q 002660 762 -------PPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE---SGDTDYE 829 (895)
Q Consensus 762 -------~~~~~l~~~l~~~--~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd---~nd~D~~ 829 (895)
....+....+... .....+..+... ++||+|+++|||+||++|+ +++.+++++|||+ ++| | +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~l~---~~~~~ev~afGD~~~~g~N-D-i 215 (243)
T d2amya1 142 YELDKKENIRQKFVADLRKEFAGKGLTFSIGGQI-SFDVFPDGWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGN-D-H 215 (243)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTT-EEEEEETTCSGGGGGGGTT---TSCCSEEEEEECSCC---C-C-C
T ss_pred HHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCEEECCCCCHHHHHHHHH---CCCCCEEEEECCCCCCCCC-C-H
T ss_conf 2110010335899999998713455279952896-4155132167899999984---8993629998689999997-6-9
Q ss_pred CCCCCCC-EEEEECCCCCCCCCCCCC
Q ss_conf 0026865-089956855320000112
Q 002660 830 GLLGGVH-KTVILKGICSSSSNQIHA 854 (895)
Q Consensus 830 eMl~~~~-~gVaMgNa~~~~~~~~~a 854 (895)
+||+.+| .|++|.|+. +.++.+
T Consensus 216 ~Ml~~~g~~~~~v~~~~---~~~~~~ 238 (243)
T d2amya1 216 EIFTDPRTMGYSVTAPE---DTRRIC 238 (243)
T ss_dssp HHHHCTTEEEEECSSHH---HHHHHH
T ss_pred HHHHCCCCCEEEECCHH---HHHHHH
T ss_conf 99971597299907999---999999
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.60 E-value=2.2e-12 Score=94.84 Aligned_cols=111 Identities=16% Similarity=0.097 Sum_probs=72.8
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC--------HHCCCCCCCEE
Q ss_conf 9996884999998989999998122994999469999996699999990998998188882--------00010498718
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP--------VDIHRVLDNGL 451 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~--------~eii~~~~~g~ 451 (895)
..+++.+.+++| ...++..+ |++|.. |-..++.|++++|+|+|+....+- .+.+.+.+.|+
T Consensus 268 ~~~~v~i~~~~p---~~~ll~~a----~~~v~h----gG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~ 336 (391)
T d1pn3a_ 268 DGADCFVVGEVN---LQELFGRV----AAAIHH----DSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGV 336 (391)
T ss_dssp CCTTCCEESSCC---HHHHHTTS----SCEEEE----SCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEE
T ss_pred CCCCEEEECCCC---HHHHHHHC----CEEEEC----CCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 889889954468---79998425----489852----7437999999828868993355677452999999999879889
Q ss_pred EECCCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 919999--9999999999973999999999999888540998999999999998
Q 002660 452 LVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 452 lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~ 503 (895)
.++..+ +++++++|.+++++ +.+++..+ ..+.++.-....-++.+.+.++
T Consensus 337 ~l~~~~~~~~~l~~~i~~~l~~-~~r~~a~~-~a~~~~~~g~~~aa~~i~~~l~ 388 (391)
T d1pn3a_ 337 AVDGPVPTIDSLSAALDTALAP-EIRARATT-VADTIRADGTTVAAQLLFDAVS 388 (391)
T ss_dssp EECCSSCCHHHHHHHHHHHTST-THHHHHHH-HGGGSCSCHHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHCH-HHHHHHHH-HHHHHHHCCHHHHHHHHHHHHH
T ss_conf 7685789999999999998399-99999999-9999885279999999999987
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.55 E-value=2.5e-16 Score=120.62 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=61.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88611999969999999999599845589995678997710002686508995685532000011269989998776899
Q 002660 789 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDS 868 (895)
Q Consensus 789 lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~ 868 (895)
....+...+|+.+.+.+++++++++++++| +||+.| | ++||+.||.|||| |+. .++++.+.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~i~~~evia-iGDg~N-D-i~Ml~~Ag~gIAm-na~--~~v~~~~~~------------ 182 (206)
T d1rkua_ 121 DRVVGYQLRQKDPKRQSVIAFKSLYYRVIA-AGDSYN-D-TTMLSEAHAGILF-HAP--ENVIREFPQ------------ 182 (206)
T ss_dssp SCEEEEECCSSSHHHHHHHHHHHTTCEEEE-EECSST-T-HHHHHHSSEEEEE-SCC--HHHHHHCTT------------
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCCC-C-HHHHHHCCCCEEE-CCC--HHHHHHCCC------------
T ss_conf 445432112014578899986425652188-438732-7-9999858940997-897--799986789------------
Q ss_pred CCEEECCCCCCHHHHHHHHHHH
Q ss_conf 9638806867858999999971
Q 002660 869 PNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 869 ~~~~~vt~~~~~dGI~~al~~~ 890 (895)
++...+.+++.++|.+.
T Consensus 183 -----~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 183 -----FPAVHTYEDLKREFLKA 199 (206)
T ss_dssp -----SCEECSHHHHHHHHHHH
T ss_pred -----CEEECCHHHHHHHHHHH
T ss_conf -----55626889999999997
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.52 E-value=1.1e-11 Score=90.30 Aligned_cols=85 Identities=16% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHCCCCCCCEEEEC
Q ss_conf 9999688499999898999999812299499946999999669999999099899818888----200010498718919
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVD 454 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg----~~eii~~~~~g~lv~ 454 (895)
.+.+++.+.+++| ...++..+ |++|. .|...++.||+++|+|+|+....+ ..+.++..+.|+.++
T Consensus 283 ~~~~~v~~~~~~p---~~~ll~~~----~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~ 351 (401)
T d1rrva_ 283 DDRDDCFAIDEVN---FQALFRRV----AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD 351 (401)
T ss_dssp CCCTTEEEESSCC---HHHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS
T ss_pred CCCCCEEEEECCC---CHHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECC
T ss_conf 5789889973148---17776212----48886----1772489999983999898066120899999999879889757
Q ss_pred CC--CHHHHHHHHHHHHHCHHHH
Q ss_conf 99--9999999999997399999
Q 002660 455 PH--DQQSVADALLKLVADKQLW 475 (895)
Q Consensus 455 p~--d~~~la~ai~~ll~~~~~~ 475 (895)
.. +++.++++|.++++ ++.+
T Consensus 352 ~~~~~~~~L~~ai~~vl~-~~~r 373 (401)
T d1rrva_ 352 GPTPTFESLSAALTTVLA-PETR 373 (401)
T ss_dssp SSCCCHHHHHHHHHHHTS-HHHH
T ss_pred CCCCCHHHHHHHHHHHHC-HHHH
T ss_conf 478999999999999849-7999
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=2.8e-11 Score=87.71 Aligned_cols=338 Identities=12% Similarity=0.051 Sum_probs=180.9
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 06753320444456765688889998415799999999805999117999526855999998879753115899998634
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~vvt~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
+||++.+ ..|||+......|+++|.++| |+|.+++..... ..+.+
T Consensus 1 kkili~~---------------~GtGGHv~~a~al~~~L~~~G--~eV~~i~~~~~~---------~~~~~--------- 45 (351)
T d1f0ka_ 1 KRLMVMA---------------GGTGGHVFPGLAVAHHLMAQG--WQVRWLGTADRM---------EADLV--------- 45 (351)
T ss_dssp CEEEEEC---------------CSSHHHHHHHHHHHHHHHTTT--CEEEEEECTTST---------HHHHG---------
T ss_pred CEEEEEC---------------CCCHHHHHHHHHHHHHHHHCC--CEEEEEEECCCC---------HHHCC---------
T ss_conf 9799983---------------885898999999999998589--989999958832---------43223---------
Q ss_pred CCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 45799997099946899987-66322258998478899999999986332001138999887829992356611289998
Q 002660 84 DDMGESSGAYIIRIPFGPKD-KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~-~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDiVh~h~~~~~~~~~~~ 162 (895)
...|..+..++..... +..... .+ .... ....+......+.+ .+||++.+........+...
T Consensus 46 ----~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~----~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~ 108 (351)
T d1f0ka_ 46 ----PKHGIEIDFIRISGLRGKGIKAL-IA-APLR----IFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLA 108 (351)
T ss_dssp ----GGGTCEEEECCCCCCTTCCHHHH-HT-CHHH----HHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHH
T ss_pred ----CCCCCCEEEEECCCCCCCCHHHH-HH-HHHH----HHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHH
T ss_conf ----50499579997888677777999-99-9988----77767777887631-------34430011032211344545
Q ss_pred HCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHH
Q ss_conf 50179989998089824149999997101588887654366778999841024689992796999999965149995789
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++.+++|.+...++....... +.....++.+....... .
T Consensus 109 a~~~~ip~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~-----------~---- 147 (351)
T d1f0ka_ 109 AWSLGIPVVLHEQNGIAGLTN--------------------------KWLAKIATKVMQAFPGA-----------F---- 147 (351)
T ss_dssp HHHTTCCEEEEECSSSCCHHH--------------------------HHHTTTCSEEEESSTTS-----------S----
T ss_pred HHHCCCCEEECCCCCCCCHHH--------------------------HHHHHHCCEEECCCCCC-----------C----
T ss_conf 540564346322212310467--------------------------77654134011023566-----------5----
Q ss_pred HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 99999672143335889998899199998999778999999877899999999999416886421389997499997278
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.....+.+......+... . ...+.....++..++.+|.-
T Consensus 148 ------------------~~~~~~~~~~~~~~~~~~--------------------~---~~~~~~~~~~~~~i~~~~gs 186 (351)
T d1f0ka_ 148 ------------------PNAEVVGNPVRTDVLALP--------------------L---PQQRLAGREGPVRVLVVGGS 186 (351)
T ss_dssp ------------------SSCEECCCCCCHHHHTSC--------------------C---HHHHHTTCCSSEEEEEECTT
T ss_pred ------------------CCEEEECCCCCCCCCCCH--------------------H---HHHHHHCCCCCCCCCCCCCC
T ss_conf ------------------300387677643100000--------------------5---77653203587431334454
Q ss_pred CCCCC-HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 99899-89999999751254699719999814999642220028999999999986299996884999998989999998
Q 002660 323 DPKKN-ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kg-i~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
..... ...+.+.+..+. . ....++++..... ......... ....++...++ .+++.++++.
T Consensus 187 ~g~~~~~~~~~~~~~~l~---~-~~~~i~~~~~~~~----------~~~~~~~~~--~~~~~~~v~~f--~~~~~~lm~~ 248 (351)
T d1f0ka_ 187 QGARILNQTMPQVAAKLG---D-SVTIWHQSGKGSQ----------QSVEQAYAE--AGQPQHKVTEF--IDDMAAAYAW 248 (351)
T ss_dssp TCCHHHHHHHHHHHHHHG---G-GEEEEEECCTTCH----------HHHHHHHHH--TTCTTSEEESC--CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHC---C-CCEEEEECCCCCH----------HHHHHHHCC--CCCCCCEEEEE--HHHHHHHHHH
T ss_conf 013466888887666524---5-5304542134104----------443343202--33223155543--0558999974
Q ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC---C----CHHCCCCCCCEEEECCC--CHHHHHHHHHHHHHCH
Q ss_conf 1229949994699999966999999909989981888---8----20001049871891999--9999999999997399
Q 002660 402 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---G----PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADK 472 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~g---g----~~eii~~~~~g~lv~p~--d~~~la~ai~~ll~~~ 472 (895)
| |++|.- +-+.++.|++++|+|+|+.... + .++.+++.+.|+.++.. +.+.+.++|..+ ++
T Consensus 249 a----dl~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~ 318 (351)
T d1f0ka_ 249 A----DVVVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SR 318 (351)
T ss_dssp C----SEEEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CH
T ss_pred C----CHHHCC----CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CH
T ss_conf 7----422205----5423778888717854654154677669999999998899899223319999999999863--99
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999999999888540998999999999998
Q 002660 473 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 473 ~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~ 503 (895)
+...+|+.++++......++..++..+++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 319 ETLLTMAERARAASIPDATERVANEVSRVAR 349 (351)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999998726995699999999999984
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.44 E-value=4.4e-10 Score=79.86 Aligned_cols=156 Identities=16% Similarity=0.063 Sum_probs=92.3
Q ss_pred CCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 9974999972789-989989999999751254699719999814999642220028999999999986299996884999
Q 002660 311 PRKPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 311 ~~~~~il~vgrl~-~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~v~~~g~ 389 (895)
....++++.|... ..+....++++++.+. ....++.+.... ....+.+++.+.++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~al~~~~-----~~~~~~~~~~~~-------------------~~~~~~~nv~~~~~ 292 (401)
T d1iira_ 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------------VLPDDGADCFAIGE 292 (401)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------------CCSSCGGGEEECSS
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCC-----CEEEEECCCCCC-------------------CCCCCCCCEEEEEC
T ss_conf 897599715754665689999999999769-----807984267764-------------------23357897899702
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHCCCCCCCEEEECCC--CHHHHHH
Q ss_conf 99898999999812299499946999999669999999099899818888----20001049871891999--9999999
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQSVAD 463 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg----~~eii~~~~~g~lv~p~--d~~~la~ 463 (895)
+| ...+|..+ |++|. .|...++.|++++|+|+|+....+ ....++..+.|+.++.. +++++++
T Consensus 293 ~p---~~~~l~~~----~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 293 VN---HQVLFGRV----AAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp CC---HHHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred CC---HHHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf 58---79999545----89996----377169999998199999806614179999999987988876847899999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999973999999999999888540998999999999998
Q 002660 464 ALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 464 ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~ 503 (895)
+|.++++ ++.+++..+ ..+..+...-..-++.+++.+.
T Consensus 362 ai~~~l~-~~~~~~a~~-~~~~~~~~~~~~aa~~i~~~i~ 399 (401)
T d1iira_ 362 ALATALT-PETHARATA-VAGTIRTDGAAVAARLLLDAVS 399 (401)
T ss_dssp HHHHHTS-HHHHHHHHH-HHHHSCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHC-HHHHHHHHH-HHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999969-799999999-9999875083999999999984
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.26 E-value=2.6e-12 Score=94.38 Aligned_cols=78 Identities=12% Similarity=0.093 Sum_probs=64.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 58861199996999999999959984558999567899771000268650899568553200001126998999877689
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPID 867 (895)
Q Consensus 788 ~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~ 867 (895)
..+....+.+|..++..++++++++++++++| ||+.| | ++|++.+|.|||| |+. ..+++.|++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i-GDs~n-D-i~m~~~ag~~va~-na~--~~lk~~Ad~----------- 195 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGAN-D-ISMFKKAGLKIAF-CAK--PILKEKADI----------- 195 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEE-ESSGG-G-HHHHHHCSEEEEE-SCC--HHHHTTCSE-----------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE-CCCCC-H-HHHHHHCCCCEEE-CCC--HHHHHHCCE-----------
T ss_conf 33211112345410335788846665541786-37847-4-9999988987899-989--999974999-----------
Q ss_pred CCCEEECCCCCCHHHHHHHHH
Q ss_conf 996388068678589999999
Q 002660 868 SPNIVQTPEDCTTSDIRSSLE 888 (895)
Q Consensus 868 ~~~~~~vt~~~~~dGI~~al~ 888 (895)
|+++.+.+||.++||
T Consensus 196 ------vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 196 ------CIEKRDLREILKYIK 210 (210)
T ss_dssp ------EECSSCGGGGGGGCC
T ss_pred ------EECCCCHHHHHHHHC
T ss_conf ------991799999999869
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.07 E-value=4e-07 Score=60.55 Aligned_cols=84 Identities=15% Similarity=0.082 Sum_probs=56.5
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCH----HC-CCCCCCEEEECC
Q ss_conf 9968849999989899999981229949994699999966999999909989981888820----00-104987189199
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DI-HRVLDNGLLVDP 455 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~----ei-i~~~~~g~lv~p 455 (895)
.+++.+..+.++.++. .+..+ ++||.- |-..++.||+.+|+|+|+....+-+ .. ++..+.|+.++.
T Consensus 329 ~~n~~v~~~~pq~~~l-~~p~~----~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~ 399 (461)
T d2acva1 329 EGKGMICGWAPQVEVL-AHKAI----GGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 399 (461)
T ss_dssp HCSEEEESSCCHHHHH-HSTTE----EEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCS
T ss_pred CCCEEEEECCCHHHHH-HCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEC
T ss_conf 7873898518778888-55657----779833----88448999998599989677600028899999998493678415
Q ss_pred --------CCHHHHHHHHHHHHHCHH
Q ss_conf --------999999999999973999
Q 002660 456 --------HDQQSVADALLKLVADKQ 473 (895)
Q Consensus 456 --------~d~~~la~ai~~ll~~~~ 473 (895)
-+.++++++|.++|++++
T Consensus 400 ~~~~~~~~~t~~~l~~a~~~vl~~d~ 425 (461)
T d2acva1 400 DYRKGSDVVAAEEIEKGLKDLMDKDS 425 (461)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 31136785479999999999960889
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=4.6e-08 Score=66.64 Aligned_cols=56 Identities=9% Similarity=0.106 Sum_probs=45.8
Q ss_pred CEEEEEEECCCC--CCCHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCC
Q ss_conf 769999831899--955169999999999964037975899984---999999999998099999
Q 002660 612 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSP 671 (895)
Q Consensus 612 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l~l~~ 671 (895)
.|.|+||+|||| ...+.+.+.++++.+++. |+.|+++| +|+...+.+.+.++|++.
T Consensus 3 ik~VifDlDGTL~~~~~~i~~a~e~i~~l~~~----g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp CCEEEEECBTTTEETTEECTTHHHHHHHHHHT----TCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCEEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 87999979980187998582099999999977----99589992899999999988876303566
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.95 E-value=4.4e-08 Score=66.79 Aligned_cols=273 Identities=11% Similarity=0.001 Sum_probs=158.5
Q ss_pred CCCCEEEECCC-CCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 87829992356-61128999850179989998089824149999997101588887654366778999841024689992
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDiVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~ 221 (895)
.+||+|..+.= ...+.++..+...++|+++..-+.-.... ..+. .. . ..|. ..-..++..++
T Consensus 87 ~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~----~~~~-~d----e---~~R~-----~iskls~~hf~ 149 (373)
T d1v4va_ 87 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNL----KEPF-PE----E---ANRR-----LTDVLTDLDFA 149 (373)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCT----TSST-TH----H---HHHH-----HHHHHCSEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCC----CCCC-CH----H---HHHH-----HHCCCCCEEEE
T ss_conf 37640011136753103778898762122241343455433----5676-16----6---6665-----52234432551
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 796999999965149995789999996721433358899988991999-9899977899999987789999999999941
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~G-id~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+++...+.+.... ..+ .++.++-+. +|. +.....
T Consensus 150 ~t~~~~~~L~~~G--e~~---------------------~~I~~vG~p~~D~--i~~~~~-------------------- 184 (373)
T d1v4va_ 150 PTPLAKANLLKEG--KRE---------------------EGILVTGQTGVDA--VLLAAK-------------------- 184 (373)
T ss_dssp SSHHHHHHHHTTT--CCG---------------------GGEEECCCHHHHH--HHHHHH--------------------
T ss_pred CCHHHHHHHHHHC--CCC---------------------CCEEECCCCHHHH--HHHHHH--------------------
T ss_conf 2215666666630--454---------------------2134426621557--776543--------------------
Q ss_pred HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 68864213899974999972789989989999999751254699719999814999642220028999999999986299
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l 380 (895)
..........+..+++.+-|....++...+++++..+.+......+.+.....+ .....+ .+....
T Consensus 185 -~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~----------~~~~~~---~~~~~~ 250 (373)
T d1v4va_ 185 -LGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAV---FPVLKG 250 (373)
T ss_dssp -HCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHH---HHHHTT
T ss_pred -HCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC----------CCHHHH---HHHHCC
T ss_conf -110002234455316884265553127899999999865335650356403422----------210355---554303
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC-CCCCHHCCCCCCCEEEECCCCHH
Q ss_conf 99688499999898999999812299499946999999669999999099899818-88820001049871891999999
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQ 459 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~-~gg~~eii~~~~~g~lv~p~d~~ 459 (895)
..++.+...++..++..+++.| ++++ + .-+-...||...|+|+|.-. .|.-++-+..+ +..+++ .|.+
T Consensus 251 ~~n~~~~~~l~~~~~l~ll~~s----~~vi-g----nSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g-~nvlv~-~d~~ 319 (373)
T d1v4va_ 251 VRNFVLLDPLEYGSMAALMRAS----LLLV-T----DSGGLQEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPE 319 (373)
T ss_dssp CTTEEEECCCCHHHHHHHHHTE----EEEE-E----SCHHHHHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHH
T ss_pred CCCCEEECCCHHHHHHHHHHHC----EEEE-C----CCCHHHHCCHHHCCCEEEECCCCCCHHHHHCC-EEEECC-CCHH
T ss_conf 3320011100078888876430----1685-0----64122220032058689848876698789629-049758-9999
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf 99999999973999999999999888540998999999999998116
Q 002660 460 SVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 460 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~l~~~~ 506 (895)
++..++..++.+++.+..+... ..-|--.+-+.+..+.+.+.+
T Consensus 320 ~I~~~i~~~l~~~~~~~~~~~~----~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 320 GVYRVVKGLLENPEELSRMRKA----KNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHS----CCSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCHHHHHHCCCC----CCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999997198988640248----898989879999999999984
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.89 E-value=3.7e-08 Score=67.31 Aligned_cols=223 Identities=12% Similarity=0.105 Sum_probs=109.5
Q ss_pred CCCEEEEEEECCCC--CCCHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCCE
Q ss_conf 55769999831899--955169999999999964037975899984---9999999999980999999998899768855
Q 002660 610 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSPSDFDAFICNSGSD 684 (895)
Q Consensus 610 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~ 684 (895)
...|+++||+|||| .....+.+.+++++|+++ |..++++| +|+...+...+..+|++. .++-++++....
T Consensus 5 ~~ik~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~~~~~~~~~~~~~~~~g~~~-~~~~v~ts~~~~ 79 (261)
T d1vjra_ 5 DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEK----NKRFVFFTNNSSLGAQDYVRKLRNMGVDV-PDDAVVTSGEIT 79 (261)
T ss_dssp GGCCEEEECCBTTTEETTEECTTHHHHHHHHHHT----TCEEEEEESCTTSCHHHHHHHHHHTTCCC-CGGGEEEHHHHH
T ss_pred HHCCEEEEECCCEEEECCCCCCHHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCC-CCCEECCHHHHH
T ss_conf 7499999959885687991683199999999976----99889995899999899999998523566-501034589999
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHC---CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 8634688889975336025877510---5585039999995421012322225775446442369863999996099999
Q 002660 685 LYYSTLNSEDGPFVVDFYYHSHIEY---RWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT 761 (895)
Q Consensus 685 I~~~~~~~~~~~~~~d~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 761 (895)
.. ..+...... ......+...+..+... ... ....+. ....+....
T Consensus 80 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~--~~~~~~~~~ 128 (261)
T d1vjra_ 80 AE--------------HMLKRFGRCRIFLLGTPQLKKVFEAYGHV-IDE--------------ENPDFV--VLGFDKTLT 128 (261)
T ss_dssp HH--------------HHHHHHCSCEEEEESCHHHHHHHHHTTCE-ECS--------------SSCSEE--EECCCTTCC
T ss_pred HH--------------HHHHHCCCCEEEEECCCCHHHHHHHCCCC-CCH--------------HHCCEE--EECCCCCCC
T ss_conf 99--------------99986379638983564305788861950-250--------------101205--745776534
Q ss_pred CCHHHHHHHHHHCCCEEEEEEECCCEE------------------------EEEECCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 628999999974057189999518835------------------------88611999969999999999599845589
Q 002660 762 PPVKELRKVLRIQALRCHVIYCQNGSR------------------------INVIPVLASRSQALRYLYLRWGVELSKMV 817 (895)
Q Consensus 762 ~~~~~l~~~l~~~~~~~~~~~~~~~~~------------------------lEI~p~g~sKg~ai~~l~~~~gi~~~~~i 817 (895)
.........+.... ..++....... .+....+-........+++++|+++++++
T Consensus 129 ~~~~~~~~~~~~~~--~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~l 206 (261)
T d1vjra_ 129 YERLKKACILLRKG--KFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMA 206 (261)
T ss_dssp HHHHHHHHHHHTTT--CEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHHCC--CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCC
T ss_conf 68899998875037--4012246775455788714145206677765313212136679957888888766404722110
Q ss_pred EEECCC-CCCCCCCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
Q ss_conf 995678-99771000268650-899568553200001126998999877689996388068678589999999
Q 002660 818 VFVGES-GDTDYEGLLGGVHK-TVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLE 888 (895)
Q Consensus 818 af~gd~-nd~D~~eMl~~~~~-gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~ 888 (895)
+ +||+ ++ | +.|-+.+|. +|.|..+....+....++. ..+|+.++. +.|.+.||
T Consensus 207 m-VGD~~~~-D-I~ga~~aG~~si~V~~G~~~~~~~~~~~~-------------~PD~ii~~l--~eL~~~l~ 261 (261)
T d1vjra_ 207 M-VGDRLYT-D-VKLGKNAGIVSILVLTGETTPEDLERAET-------------KPDFVFKNL--GELAKAVQ 261 (261)
T ss_dssp E-EESCHHH-H-HHHHHHHTCEEEEESSSSCCHHHHHHCSS-------------CCSEEESSH--HHHHHHHC
T ss_pred E-ECCCHHH-H-HHHHHHCCCCEEEECCCCCCHHHHHHCCC-------------CCCEEECCH--HHHHHHHC
T ss_conf 3-1687167-8-99999879969998989998778863689-------------998998899--99999769
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.86 E-value=5.7e-10 Score=79.11 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=38.5
Q ss_pred CCCCCHHHH--HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 199996999--999999959984558999567899771000268650-89956855
Q 002660 793 PVLASRSQA--LRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 793 p~g~sKg~a--i~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~-gVaMgNa~ 845 (895)
+.+.+|..+ ..++++++|+++++++++||+.++ | +.|.+.+|. +|.|.++.
T Consensus 175 ~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~-D-I~~a~~aG~~si~V~~G~ 228 (253)
T d1yv9a1 175 PVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYET-D-IQSGIQNGIDSLLVTSGF 228 (253)
T ss_dssp CEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTT-H-HHHHHHHTCEEEEETTSS
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHH-H-HHHHHHCCCCEEEECCCC
T ss_conf 36513431267878999848884423784378277-9-999998799899989899
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.84 E-value=1.9e-06 Score=56.07 Aligned_cols=94 Identities=12% Similarity=0.135 Sum_probs=65.0
Q ss_pred CCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHCC-CCCCCEEEE
Q ss_conf 99688499999898999999--8122994999469999996699999990998998188882----0001-049871891
Q 002660 381 YGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLV 453 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~--~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~----~eii-~~~~~g~lv 453 (895)
..++.+..++|+. +++. .+ ++||.- |-..++.||+.+|+|+|+....+- ...+ +..+.|+.+
T Consensus 345 ~~Nv~~~~~~Pq~---~lL~hp~~----~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l 413 (473)
T d2pq6a1 345 ADRGLIASWCPQD---KVLNHPSI----GGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 413 (473)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEEECCHH---HHHCCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 4766886308879---99647767----599956----884089999985999896564112188999999971737861
Q ss_pred CCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 999-999999999999739999999999998885
Q 002660 454 DPH-DQQSVADALLKLVADKQLWARCRQNGLKNI 486 (895)
Q Consensus 454 ~p~-d~~~la~ai~~ll~~~~~~~~~~~~~~~~~ 486 (895)
+.. +.++++++|.++++++.- +++++++++..
T Consensus 414 ~~~~t~~~l~~ai~~vl~d~~~-~~~r~~a~~l~ 446 (473)
T d2pq6a1 414 DTNVKREELAKLINEVIAGDKG-KKMKQKAMELK 446 (473)
T ss_dssp CSSCCHHHHHHHHHHHHTSHHH-HHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCHH-HHHHHHHHHHH
T ss_conf 8973899999999999769768-99999999999
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.82 E-value=4.1e-06 Score=53.94 Aligned_cols=251 Identities=11% Similarity=0.085 Sum_probs=143.0
Q ss_pred CCCCEEEECCC-CCHHHHHHHHCCCCCCEEEEECCCCHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 87829992356-611289998501799899980898241-4999999710158888765436677899984102468999
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRD-KLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDiVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi 220 (895)
.+||+|..+.= ...+.++.++..+++|+++..-+.-.. .. .+. +. . ..|. ..-..++..+
T Consensus 87 ~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~-----~~~-~d----e---~~R~-----~iskls~~hf 148 (377)
T d1o6ca_ 87 IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKY-----SPF-PE----E---LNRQ-----MTGAIADLHF 148 (377)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTT-----TTT-TH----H---HHHH-----HHHHHCSEEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCC-----CCC-CH----H---HHCC-----CCCCCEEEEE
T ss_conf 366536764034543015666531142279995145654332-----347-14----5---5400-----3565304886
Q ss_pred ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2796999999965149995789999996721433358899988991999-989997789999998778999999999994
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~G-id~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
++++...+.+.+.. ....+|.++.+. +|.-......... ..
T Consensus 149 ~~t~~~~~~L~~~G-----------------------~~~~~I~~vG~~~~D~i~~~~~~~~~-~~-------------- 190 (377)
T d1o6ca_ 149 APTGQAKDNLLKEN-----------------------KKADSIFVTGNTAIDALNTTVRDGYS-HP-------------- 190 (377)
T ss_dssp ESSHHHHHHHHHTT-----------------------CCGGGEEECCCHHHHHHHHHCCSSCC-CS--------------
T ss_pred ECCHHHHHHHHHHC-----------------------CCCCEEEECCCHHHHHHHHHHHHHHH-HH--------------
T ss_conf 32346663443303-----------------------44542752342067888877777775-33--------------
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCC-CHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 168864213899974999972789989-9899999997512546997199998149996422200289999999999862
Q 002660 300 IWSEIMRFFTNPRKPVILALARPDPKK-NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~vgrl~~~K-gi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~ 378 (895)
. ......+..+++.+-|..... .....+.++..+.. ......++....+. . .-........
T Consensus 191 ----~-~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~-~----------~~~~~~~~~~ 252 (377)
T d1o6ca_ 191 ----V-LDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVG--EFEDVQVVYPVHLN-P----------VVREAAHKHF 252 (377)
T ss_dssp ----T-TTTTTTSEEEEECC----------HHHHHHHHHHHH--HCTTEEEEEC-----C----------HHHHHHHHC-
T ss_pred ----H-HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCCC-C----------CCCHHHHHCC
T ss_conf ----3-443057844999832310146633789999875212--33556532345521-1----------3211221013
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCHHCCCCCCCEEEECCCC
Q ss_conf 99996884999998989999998122994999469999996699999990998998188-88200010498718919999
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~-gg~~eii~~~~~g~lv~p~d 457 (895)
...+++.+...++..++..+++.| ++++ + + .|-...||...|+|+|.-.. +.-++.+..+ +-+++++ |
T Consensus 253 ~~~~ni~~~~~l~~~~fl~llk~s----~~vI-g---n-Sss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~ 321 (377)
T d1o6ca_ 253 GDSDRVHLIEPLEVIDFHNFAAKS----HFIL-T---D-SGGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-D 321 (377)
T ss_dssp -CCSSEEECCCCCHHHHHHHHHHC----SEEE-E---C---CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-C
T ss_pred CCCCCEEECCCCCHHHHHHHHHHH----HEEE-C---C-CCHHHHHHHHHHCEEEEECCCCCCCCHHHCC-EEEECCC-C
T ss_conf 456514751321368899998642----2564-1---6-4046776666541489807887582200068-0598789-9
Q ss_pred HHHHHHHHHHHHHCHHHHHHH
Q ss_conf 999999999997399999999
Q 002660 458 QQSVADALLKLVADKQLWARC 478 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~ 478 (895)
.+++.+++..++.++..++.+
T Consensus 322 ~~~I~~~i~~~l~~~~~~~~~ 342 (377)
T d1o6ca_ 322 EENIYQLAKQLLTDPDEYKKM 342 (377)
T ss_dssp HHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHCHHHHHHH
T ss_conf 999999999997496877630
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.79 E-value=2.1e-06 Score=55.82 Aligned_cols=83 Identities=16% Similarity=0.205 Sum_probs=60.0
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHH----CCCC-CCCEEEE
Q ss_conf 9968849999989899999--9812299499946999999669999999099899818888200----0104-9871891
Q 002660 381 YGQVAYPKHHKQSDVPEIY--RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD----IHRV-LDNGLLV 453 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly--~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~~e----ii~~-~~~g~lv 453 (895)
..++.+..++|+. .++ ..+ ++||.- |-..+..||+.+|+|+|+....+-+. .+.+ .+.|+.+
T Consensus 318 ~~nv~~~~~~pq~---~lL~hp~~----~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 318 RGYGMVVPWAPQA---EVLAHEAV----GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCCCCCCCHH---HHHCCCCE----EEEECC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 3540155467837---66526741----699706----883079999985999896354000089999999970908980
Q ss_pred CCC--CHHHHHHHHHHHHHCHHH
Q ss_conf 999--999999999999739999
Q 002660 454 DPH--DQQSVADALLKLVADKQL 474 (895)
Q Consensus 454 ~p~--d~~~la~ai~~ll~~~~~ 474 (895)
+.. +.+++.++|.++|+++.-
T Consensus 387 ~~~~~t~~~l~~ai~~vL~d~~y 409 (450)
T d2c1xa1 387 EGGVFTKSGLMSCFDQILSQEKG 409 (450)
T ss_dssp GGGSCCHHHHHHHHHHHHHSHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 38983899999999999619479
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=1.3e-06 Score=57.21 Aligned_cols=227 Identities=14% Similarity=0.076 Sum_probs=130.2
Q ss_pred HHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC-C-------
Q ss_conf 84102468999279699999996514999578999999672143335889998899199998999778999-9-------
Q 002660 210 ELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDG-D------- 281 (895)
Q Consensus 210 ~~~l~~ad~Vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~-~------- 281 (895)
..++..+..+-.+|+-..+-..+.. .+.. +.....++.-|-|||...++..... .
T Consensus 408 ~LAl~~S~~vNGVSklH~ev~~~~~---~~~~--------------~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~ 470 (796)
T d1l5wa_ 408 NLCVVGGFAVNGVAALHSDLVVKDL---FPEY--------------HQLWPNKFHNVTNGITPRRWIKQCNPALAALLDK 470 (796)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHTT---SHHH--------------HHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHC--------------CCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHH
T ss_conf 9999860466799999999999875---3312--------------5568766434456615778874327899999876
Q ss_pred --------CCCCCCCCCCCCCCCCCC---HH---------------HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf --------998778999999999994---16---------------8864213899974999972789989989999999
Q 002660 282 --------MDGETEGNEDNPASPDPP---IW---------------SEIMRFFTNPRKPVILALARPDPKKNITTLVKAF 335 (895)
Q Consensus 282 --------~~~~~~~~~~~~~~~~~~---~~---------------~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~ 335 (895)
........... ...+. .+ .......++++...++++-|+...|...+.+.-.
T Consensus 471 ~ig~~w~~~~~~l~~~~~~--~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i 548 (796)
T d1l5wa_ 471 SLQKEWANDLDQLINLEKF--ADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHI 548 (796)
T ss_dssp HCSSCCTTCGGGGGGGGGG--GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHH
T ss_pred HCCCCCCCCHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH
T ss_conf 4565213477889988863--68799999999999999999999999852963585651403434544431453035359
Q ss_pred ----HHCCCCC--CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC------CCCEEECCCCCCCCHHHHHHHHH
Q ss_conf ----7512546--99719999814999642220028999999999986299------99688499999898999999812
Q 002660 336 ----GECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL------YGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 336 ----~~l~~~~--~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l------~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
..+.... +...+++|.++...+.. ...++++..|.......+- ..+|.|+.-.+-.--..++..+
T Consensus 549 ~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d--~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~- 625 (796)
T d1l5wa_ 549 LALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAA- 625 (796)
T ss_dssp HHHHHHHHTCTTCCCCCEEEEEECCCCTTC--HHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGC-
T ss_pred HHHHHHHHCCCCCCCCCEEEEECCCCCCCH--HHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCC-
T ss_conf 999999850864577865999748889831--78999999999999986178554363338980787568999874401-
Q ss_pred CCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHCCCC--CCCEEEECCCCHHHHH
Q ss_conf 29949994699--99996699999990998998188882000104--9871891999999999
Q 002660 404 KTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLLVDPHDQQSVA 462 (895)
Q Consensus 404 ~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~--~~~g~lv~p~d~~~la 462 (895)
||-+++|. .|..|.+-+-|+.-|.+.+++..|...|+.+. +.||+++. .+.+++.
T Consensus 626 ---DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG-~~~~ev~ 684 (796)
T d1l5wa_ 626 ---DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFG-HTVEQVK 684 (796)
T ss_dssp ---SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS-CCHHHHH
T ss_pred ---CHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEC-CCHHHHH
T ss_conf ---2654099987345782677999859716604664479888863745368806-8667778
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.77 E-value=4.6e-09 Score=73.20 Aligned_cols=79 Identities=9% Similarity=-0.037 Sum_probs=64.9
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86119999699999999995998455899956789977100026865089956855320000112699899987768999
Q 002660 790 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSP 869 (895)
Q Consensus 790 EI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~ 869 (895)
++.....+|..+++.+++++++++++++.+|||.| | ++||+.+++++||+||. .++|..|++
T Consensus 73 ~~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~n--D-l~~l~~~g~siap~nA~--~~vk~~A~~------------- 134 (177)
T d1k1ea_ 73 LFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSV--D-LPAFAACGTSFAVADAP--IYVKNAVDH------------- 134 (177)
T ss_dssp EEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGG--G-HHHHHHSSEEEECTTSC--HHHHTTSSE-------------
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC--H-HHHHHHCCEEEECCCCC--HHHHHHCCE-------------
T ss_conf 01101363888999999986677522577058840--7-89996689289848864--999985899-------------
Q ss_pred CEEECCCCCCHHH-HHHHHHHH
Q ss_conf 6388068678589-99999971
Q 002660 870 NIVQTPEDCTTSD-IRSSLEQL 890 (895)
Q Consensus 870 ~~~~vt~~~~~dG-I~~al~~~ 890 (895)
||....-+| |.+.++++
T Consensus 135 ----Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 135 ----VLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp ----ECSSCTTTTHHHHHHHHH
T ss_pred ----EECCCCCCCHHHHHHHHH
T ss_conf ----917889976399999999
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.68 E-value=1.1e-05 Score=51.18 Aligned_cols=92 Identities=14% Similarity=0.101 Sum_probs=62.1
Q ss_pred CCCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHCC-CCCCCEEE
Q ss_conf 999688499999898999999--8122994999469999996699999990998998188882----0001-04987189
Q 002660 380 LYGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLL 452 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~--~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~gg~----~eii-~~~~~g~l 452 (895)
..++|.+.+++|+.+ ++. .+ ++||.= |-..+..||+.+|+|+|+....+- ...+ +..+.|+.
T Consensus 332 ~~~nv~~~~w~Pq~~---lL~hp~~----~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~ 400 (471)
T d2vcha1 332 KKRGFVIPFWAPQAQ---VLAHPST----GGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 400 (471)
T ss_dssp TTTEEEEESCCCHHH---HHHSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEEC
T ss_pred CCCCEEECCCCCHHH---HHCCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEE
T ss_conf 678755216578999---8657657----889706----88428999998599989714401228899999997204899
Q ss_pred ECC-----CCHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 199-----9999999999999739999999999998
Q 002660 453 VDP-----HDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 453 v~p-----~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
+.. -+.+++.++|.+++++++- +.++++++
T Consensus 401 l~~~~~~~~t~~~l~~ai~~vl~~~~~-~~~r~ra~ 435 (471)
T d2vcha1 401 PRAGDDGLVRREEVARVVKGLMEGEEG-KGVRNKMK 435 (471)
T ss_dssp CCCCTTSCCCHHHHHHHHHHHHTSTHH-HHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHCCCHH-HHHHHHHH
T ss_conf 724878869799999999999679478-99999999
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.53 E-value=2.3e-08 Score=68.59 Aligned_cols=79 Identities=8% Similarity=-0.059 Sum_probs=55.7
Q ss_pred EECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 61199996999999999959984558999567899771000268650899568553200001126998999877689996
Q 002660 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPN 870 (895)
Q Consensus 791 I~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~ 870 (895)
....+.+|+..++.+++.++++.+++++ +||+.+ | ++|++.++.++||++.. ...++..-.
T Consensus 139 ~~~~~~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-l~~a~~A~~~~a~~~~~--~~~~~~~~~-------------- 199 (226)
T d2feaa1 139 KGTCSNQCGCCKPSVIHELSEPNQYIIM-IGDSVT-D-VEAAKLSDLCFARDYLL--NECREQNLN-------------- 199 (226)
T ss_dssp CTTCCSCCSSCHHHHHHHHCCTTCEEEE-EECCGG-G-HHHHHTCSEEEECHHHH--HHHHHTTCC--------------
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCEEEEECCHH--HHHHHCCCC--------------
T ss_conf 4325567899999999984678863899-807631-3-99999889978706467--999982998--------------
Q ss_pred EEECCCCCCHHHHHHHHHHHC
Q ss_conf 388068678589999999718
Q 002660 871 IVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 871 ~~~vt~~~~~dGI~~al~~~~ 891 (895)
++ .-.+-++|...|+++.
T Consensus 200 --~~-~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 200 --HL-PYQDFYEIRKEIENVK 217 (226)
T ss_dssp --EE-CCSSHHHHHHHHHTSH
T ss_pred --EE-ECCCHHHHHHHHHHHH
T ss_conf --36-2499999999999987
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.50 E-value=1.8e-05 Score=49.66 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=153.6
Q ss_pred HHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCC-------
Q ss_conf 410246899927969999999651499957899999967214333588999889919999899977899-999-------
Q 002660 211 LSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD-GDM------- 282 (895)
Q Consensus 211 ~~l~~ad~Vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~-~~~------- 282 (895)
.++..+..+-.+|.-..+-..+.. +.+- +.....++.-+-|||.+.++-... +..
T Consensus 433 Lal~~S~~vNGVSklH~ev~~~~~--~~~~---------------~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ 495 (824)
T d2gj4a1 433 LCIAGSHAVNGVARIHSEILKKTI--FKDF---------------YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAER 495 (824)
T ss_dssp HHHHTCSCEEESSHHHHHHHHHTT--THHH---------------HHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHH--CCCC---------------CCCCCCCEECCCCCCCCCCCHHCCCHHHHHHHHHH
T ss_conf 999864267889999999999764--3565---------------66787240266475157611311697799987754
Q ss_pred --C------CCCCCCCCCCCCCCCC---HH------------H---HHHHHCCCCCCCEEEEEECCCCCCCHHH----HH
Q ss_conf --9------8778999999999994---16------------8---8642138999749999727899899899----99
Q 002660 283 --D------GETEGNEDNPASPDPP---IW------------S---EIMRFFTNPRKPVILALARPDPKKNITT----LV 332 (895)
Q Consensus 283 --~------~~~~~~~~~~~~~~~~---~~------------~---~~~~~~~~~~~~~il~vgrl~~~Kgi~~----ll 332 (895)
. ...+++... .+.+. .+ . ......++++...++++-|+...|...+ .+
T Consensus 496 ig~~w~~d~~~l~~l~~~--~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~ 573 (824)
T d2gj4a1 496 IGEEYISDLDQLRKLLSY--VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVI 573 (824)
T ss_dssp HCSGGGGCGGGGGGGGGG--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHH
T ss_pred HCCCCCCCHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECHHHHHHHHHHHHHH
T ss_conf 344322598999998873--898999999999999828999999999838778964110131000023333456676589
Q ss_pred HHHHHCCCC--CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC------CEEECCCCCCCCHHHHHHHHHC
Q ss_conf 999751254--69971999981499964222002899999999998629999------6884999998989999998122
Q 002660 333 KAFGECRPL--RELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG------QVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 333 ~A~~~l~~~--~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~------~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.-+.++... .+...+++|.|+...+... ..++++..|+...+..+..+ +|.|+.-..-.--..++..+
T Consensus 574 ~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~--~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~-- 649 (824)
T d2gj4a1 574 TLYNRIKKEPNKFVVPRTVMIGGKAAPGYH--MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAA-- 649 (824)
T ss_dssp HHHHHHHHCTTSCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGC--
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCH--HHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHH--
T ss_conf 999876534567888749998078897638--8999999999999987418112153448870787669999751143--
Q ss_pred CCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHCCCC--CCCEEEECCCCHHHHH-------------H----
Q ss_conf 9949994699--99996699999990998998188882000104--9871891999999999-------------9----
Q 002660 405 TKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLLVDPHDQQSVA-------------D---- 463 (895)
Q Consensus 405 ~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVIas~~gg~~eii~~--~~~g~lv~p~d~~~la-------------~---- 463 (895)
||.++.|. .|..|.+-+-+|.-|.+.+++..|...|+.+. +.||+++.. +.+++. +
T Consensus 650 --Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~-~~~ev~~~~~~~y~~~~~y~~~~~ 726 (824)
T d2gj4a1 650 --DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM-RVEDVDRLDQRGYNAQEYYDRIPE 726 (824)
T ss_dssp --SEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCHH
T ss_pred --HHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEEECC-CHHHHHHHHHCCCCHHHHHHHCHH
T ss_conf --44131899973457750458997598356356635899998647566798179-715555776557898999753999
Q ss_pred ------------------------------------------------HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf ------------------------------------------------99999739999999999998885409989999
Q 002660 464 ------------------------------------------------ALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 495 (895)
Q Consensus 464 ------------------------------------------------ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a 495 (895)
.+.....+|..|.++........-.||.+++.
T Consensus 727 l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~~g~FssdR~i 806 (824)
T d2gj4a1 727 LRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTI 806 (824)
T ss_dssp HHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999985026678887046788999885377045541289999999999986319999999999998658980728899
Q ss_pred HHHHHHHHCC
Q ss_conf 9999999811
Q 002660 496 KTYLSRIAGC 505 (895)
Q Consensus 496 ~~~~~~l~~~ 505 (895)
.+|.+.+-.+
T Consensus 807 ~eY~~~iw~~ 816 (824)
T d2gj4a1 807 AQYAREIWGV 816 (824)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCCCC
T ss_conf 9999970197
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.45 E-value=2e-06 Score=56.00 Aligned_cols=192 Identities=13% Similarity=0.110 Sum_probs=93.6
Q ss_pred CEEEEEEECCCC--CCCHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCHHHHHHHHHH-CCCCCCCCCEEEECCCCEE
Q ss_conf 769999831899--955169999999999964037975899984---9999999999980-9999999988997688558
Q 002660 612 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 612 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~-l~l~~~~~d~~I~~nGa~I 685 (895)
.|.++||+|||| ...+.+...+++++|++. |+.++++| .|+...+...+.. .++.. ..+-++++..+..
T Consensus 2 yk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~ 76 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQER----QLPYILVTNNTTRTPEMVQEMLATSFNIKT-PLETIYTATLATI 76 (253)
T ss_dssp CCEEEEECBTTTEETTEECHHHHHHHHHHHHH----TCCEEEEECCCSSCHHHHHHHHHHHHSCCC-CGGGEEEHHHHHH
T ss_pred CCEEEECCCCCEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCCHHHHHH
T ss_conf 69999928682088998381499999999977----997899948998999999999986067654-4333466799999
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHCC-----CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
Q ss_conf 6346888899753360258775105-----58503999999542101232222577544644236986399999609999
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYR-----WGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM 760 (895)
Q Consensus 686 ~~~~~~~~~~~~~~d~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 760 (895)
.+....... .....+...+..... ... ....... +......
T Consensus 77 ----------------~~l~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~-------------~~~~~~~-~~~~~~~- 122 (253)
T d1wvia_ 77 ----------------DYMNDMKRGKTAYVIGETGLKKAVAEAGY---RED-------------SENPAYV-VVGLDTN- 122 (253)
T ss_dssp ----------------HHHHHHCCCSEEEEESCHHHHHHHHHTTC---EEC-------------SSSCSEE-EECCCTT-
T ss_pred ----------------HHHHHHCCCCEEEECCCHHHHHHHHHCCC---CCC-------------CCCCCEE-EEECCCC-
T ss_conf ----------------99987045851343266678999997297---533-------------3443048-9854787-
Q ss_pred CCCHHHHHHHHHHCCCEEEEEEECCCEE---------------------EEEECCCCCH--HHHHHHHHHHHCCCCCCEE
Q ss_conf 9628999999974057189999518835---------------------8861199996--9999999999599845589
Q 002660 761 TPPVKELRKVLRIQALRCHVIYCQNGSR---------------------INVIPVLASR--SQALRYLYLRWGVELSKMV 817 (895)
Q Consensus 761 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~---------------------lEI~p~g~sK--g~ai~~l~~~~gi~~~~~i 817 (895)
..........+..... ..++.+++... ....+..++| ...+.+.++++|+++++++
T Consensus 123 ~~~~~~~~~~~~~~~~-~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~ 201 (253)
T d1wvia_ 123 LTYEKLTLATLAIQKG-AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAI 201 (253)
T ss_dssp CBHHHHHHHHHHHHTT-CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEE
T ss_pred CCHHHHHHHHHHHHHC-CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCEE
T ss_conf 6788887776666522-551167999634768863046773210123333330478416774200110011034545169
Q ss_pred EEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 99567899771000268650-89956855
Q 002660 818 VFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 818 af~gd~nd~D~~eMl~~~~~-gVaMgNa~ 845 (895)
.+||+-.+ | +.|-+.+|. +|.+..+.
T Consensus 202 mIGDs~~~-D-I~gA~~aG~~si~V~~G~ 228 (253)
T d1wvia_ 202 MVGDNYLT-D-ITAGIKNDIATLLVTTGF 228 (253)
T ss_dssp EEESCTTT-T-HHHHHHTTCEEEEESSSS
T ss_pred EECCCHHH-H-HHHHHHCCCCEEEECCCC
T ss_conf 98278077-7-999998799799989899
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.25 E-value=9.5e-07 Score=58.07 Aligned_cols=58 Identities=10% Similarity=0.190 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 199996999999999959984558999567899771000268650899568553200001126
Q 002660 793 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHAN 855 (895)
Q Consensus 793 p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~~~~~a~ 855 (895)
..+..|+..++.+++.++ ++++++ +||+.+ | +.|++.+|.+|||++.......+..++
T Consensus 149 ~~~~~K~~~v~~~~~~~~--~~~~~~-vGDs~~-D-i~~~~~ag~~va~~~~~~~~~~~~~ad 206 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFH--FKKIIM-IGDGAT-D-MEACPPADAFIGFGGNVIRQQVKDNAK 206 (217)
T ss_dssp GSTTHHHHHHHHHHHHHC--CSCEEE-EESSHH-H-HTTTTTSSEEEEECSSCCCHHHHHHCS
T ss_pred ECCCHHHHHHHHHHHCCC--CCCCEE-EEECHH-H-HHHHHHCCCEEEECCCHHHHHHHHHCC
T ss_conf 242208999999986348--666389-971786-5-998986892199798777899998689
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=0.00024 Score=42.35 Aligned_cols=279 Identities=13% Similarity=0.109 Sum_probs=151.1
Q ss_pred CCCCEEEECC-CCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 8782999235-661128999850179989998089824149999997101588887654366778999841024689992
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDiVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~Vi~ 221 (895)
.+||+|..+. -...+.++..+..+++|+++..-+.-.... ..+. +. . ..|. ..-..++..++
T Consensus 85 ~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~----~~~~-pd----e---~~R~-----~iskls~~hf~ 147 (376)
T d1f6da_ 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDL----YSPW-PE----E---ANRT-----LTGHLAMYHFS 147 (376)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCT----TSST-TH----H---HHHH-----HHHHTCSEEEE
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC----CCCC-CH----H---HHHH-----HHCCCEEEEEE
T ss_conf 56762243103443136899987407538998524465420----0047-40----6---6554-----20320048874
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 796999999965149995789999996721433358899988991999-9899977-89999998778999999999994
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIV-PQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~G-id~~~f~-~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
+++...+.+.+.. ..+ .++.++.+. +|.-... +.... ....
T Consensus 148 ~~~~~~~~L~~~G--~~~---------------------~~I~~vG~~~~D~l~~~~~~~~~--------------~~~~ 190 (376)
T d1f6da_ 148 PTETSRQNLLREN--VAD---------------------SRIFITGNTVIDALLWVRDQVMS--------------SDKL 190 (376)
T ss_dssp SSHHHHHHHHHTT--CCG---------------------GGEEECCCHHHHHHHHHHHHTTT--------------CHHH
T ss_pred CCHHHHHHHHHCC--CCC---------------------CCCCEECCCHHHHHHHHHHHHHC--------------CCHH
T ss_conf 3478886877518--986---------------------53412167248788887765423--------------5123
Q ss_pred HHHHHH-HHCCCCC-CCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 168864-2138999-74999972789-98998999999975125469971999981499964222002899999999998
Q 002660 300 IWSEIM-RFFTNPR-KPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 300 ~~~~~~-~~~~~~~-~~~il~vgrl~-~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~ 376 (895)
...... ......+ ..+++..-|.. ..+.+..++.++..+.+.. .++.++....+. ......+. .
T Consensus 191 ~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~--~~~~ii~p~~~~--------~~~~~~~~---~ 257 (376)
T d1f6da_ 191 RSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTH--QDIQIVYPVHLN--------PNVREPVN---R 257 (376)
T ss_dssp HHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHC--TTEEEEEECCBC--------HHHHHHHH---H
T ss_pred HHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC--CEEEEECCCCCC--------HHHHHHHH---H
T ss_conf 2111102233477776699833541111200999999986543421--404785254432--------12444676---6
Q ss_pred HCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCHHCCCCCCCEEEECC
Q ss_conf 6299996884999998989999998122994999469999996699999990998998188-882000104987189199
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDP 455 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~-gg~~eii~~~~~g~lv~p 455 (895)
.....+++.+...++..+...+++.| .+++-- .+-...||...|+|+|.-.. ..-++.+.. .+-+++++
T Consensus 258 ~~~~~~ni~~~~~l~~~~fl~ll~~a----~~vign-----Sssgi~Ea~~lg~P~Inir~~ter~~~~~~-g~~i~v~~ 327 (376)
T d1f6da_ 258 ILGHVKNVILIDPQEYLPFVWLMNHA----WLILTD-----SGGIQEEAPSLGKPVLVMRDTTERPEAVTA-GTVRLVGT 327 (376)
T ss_dssp HHTTCTTEEEECCCCHHHHHHHHHHC----SEEEES-----SSGGGGTGGGGTCCEEECSSCCSCHHHHHH-TSEEECCS
T ss_pred HHCCCCCCEEECCCCHHHHHHHHHHC----EEEEEC-----CCCHHHHHHHHCCCEEECCCCCCCCCCEEC-CEEEECCC
T ss_conf 64044451332355678999998416----399836-----850676678748988972787657641236-80698789
Q ss_pred CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHC
Q ss_conf 9999999999999739999999999998885-409989999999999981
Q 002660 456 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~l~~ 504 (895)
|.+++.+++.+++.++.....+ ... ..|--...+++..++++.
T Consensus 328 -~~~~I~~ai~~~l~~~~~~~~~-----~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 328 -DKQRIVEEVTRLLKDENEYQAM-----SRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp -SHHHHHHHHHHHHHCHHHHHHH-----HHSCCTTCCSCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHCHHHHHHH-----CCCCCCCCCCHHHHHHHHHHHH
T ss_conf -9999999999997285766530-----4578989898499999999985
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.73 E-value=6.6e-05 Score=46.01 Aligned_cols=61 Identities=10% Similarity=0.157 Sum_probs=50.7
Q ss_pred EEEEEEECCCC---------CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC---------------HHHHHHHHHHCC
Q ss_conf 69999831899---------955169999999999964037975899984999---------------999999998099
Q 002660 613 HIFVISVDCDS---------TTGLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFLVSGH 668 (895)
Q Consensus 613 kli~~DiDGTL---------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---------------~~~~~~~l~~l~ 668 (895)
|-|+||+|||| ...+.+...+.++.|.++ |+.++|.|+|. ...+.+||+.+|
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~----G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~g 77 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL----GFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ 77 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT----TCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred CEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999378872889999827368489999999999987----99899995687545577577878889999999999829
Q ss_pred CCCCCCCEEEEC
Q ss_conf 999999889976
Q 002660 669 LSPSDFDAFICN 680 (895)
Q Consensus 669 l~~~~~d~~I~~ 680 (895)
++ +|-++..
T Consensus 78 I~---Yd~Li~g 86 (124)
T d1xpja_ 78 VP---YDEILVG 86 (124)
T ss_dssp CC---CSEEEEC
T ss_pred CC---CEEEEEC
T ss_conf 98---2388879
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.62 E-value=0.00049 Score=40.35 Aligned_cols=53 Identities=11% Similarity=0.064 Sum_probs=45.6
Q ss_pred EEEEEEECCCCC----CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 699998318999----551699999999999640379758999849999999999980999
Q 002660 613 HIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..++||.+|+++ ..+.+..+++++.|++. |+.+.+.||.....+..+.+.+|+
T Consensus 4 ~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~----Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRM----GIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEECCCEEEEEECCCCCCCCHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999998914799736889981199999999985----997999758633555677765422
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.53 E-value=0.0002 Score=42.95 Aligned_cols=160 Identities=13% Similarity=0.101 Sum_probs=97.9
Q ss_pred EEEEEECCCCC----CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECC
Q ss_conf 99998318999----55169999999999964037975899984999999999998099999999889976885586346
Q 002660 614 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 614 li~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
++.+|.+|||+ ..+-+.++++++.|++. |+.+.++||=+...+..+.+++|+.. +..++...
T Consensus 4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~----GI~v~miTGD~~~tA~~ia~~~Gi~~---------~~~~v~~~- 69 (168)
T d1wpga2 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDA----GIRVIMITGDNKGTAIAICRRIGIFG---------ENEEVADR- 69 (168)
T ss_dssp EEEECCTTTTBCCCECCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHTTSSC---------TTCCCTTT-
T ss_pred EEEECCCCEEEEEECCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCCC---------CCCCCCCC-
T ss_conf 99978851788873488965399999999988----49899989999799999999849988---------76411100-
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHH
Q ss_conf 88889975336025877510558503999999542101232222577544644236986399999609999962899999
Q 002660 690 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 769 (895)
Q Consensus 690 ~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~ 769 (895)
. ..+ +. +... ...+..+
T Consensus 70 ------~----~~~----------~~----~~~~---------------------------------------~~~~~~~ 86 (168)
T d1wpga2 70 ------A----YTG----------RE----FDDL---------------------------------------PLAEQRE 86 (168)
T ss_dssp ------E----EEH----------HH----HHHS---------------------------------------CHHHHHH
T ss_pred ------C----CCC----------CC----CCHH---------------------------------------HHHHHHH
T ss_conf ------0----346----------30----0001---------------------------------------2788766
Q ss_pred HHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 99740571899995188358861199996999999999959984558999567899771000268650899568553200
Q 002660 770 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849 (895)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgNa~~~~~ 849 (895)
.+... . -+-++.|. .|..-++.|.+ .| .++++.||+.| | ..||+.+..||+|+++. ..
T Consensus 87 ~~~~~----~-------v~ar~~p~--~K~~lv~~l~~-~g----~~Va~vGDG~n-D-~~AL~~AdvGIa~~~gt--~~ 144 (168)
T d1wpga2 87 ACRRA----C-------CFARVEPS--HKSKIVEYLQS-YD----EITAMTGDGVN-D-APALKKAEIGIAMGSGT--AV 144 (168)
T ss_dssp HHHHC----C-------EEESCCHH--HHHHHHHHHHH-TT----CCEEEEECSGG-G-HHHHHHSSEEEEETTSC--HH
T ss_pred HHHHH----H-------HHHCCCHH--HHHHHHHHHHH-CC----CCEEEEECCCC-C-HHHHHHCCEEEEECCCC--HH
T ss_conf 55322----3-------00000114--78889999874-04----54047706778-8-89998598888865511--99
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
Q ss_conf 0011269989998776899963880686785899999997
Q 002660 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQ 889 (895)
Q Consensus 850 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~ 889 (895)
.+..|+. +-.+.+-..|.++++.
T Consensus 145 a~~aAdi-----------------vl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 145 AKTASEM-----------------VLADDNFSTIVAAVEE 167 (168)
T ss_dssp HHHTCSE-----------------EETTCCTHHHHHHHHH
T ss_pred HHHHCCE-----------------EECCCCHHHHHHHHHC
T ss_conf 9984899-----------------9915998999999974
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.52 E-value=7.2e-05 Score=45.80 Aligned_cols=44 Identities=5% Similarity=0.046 Sum_probs=37.6
Q ss_pred CCCCEEEEEEECCCCC---------------CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 3557699998318999---------------55169999999999964037975899984999
Q 002660 609 RRRKHIFVISVDCDST---------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~---------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
+++.|.++||+||||. ..+.+.+.++++.|+++ |..++++|||+
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~----G~~Iii~T~R~ 62 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM----GYQIVVVSGRE 62 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT----TCEEEEEECSC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCC
T ss_conf 999968999748883827898757733304084487899999999844----48089992685
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.29 E-value=0.0002 Score=42.82 Aligned_cols=61 Identities=11% Similarity=0.006 Sum_probs=47.1
Q ss_pred EEEEEECCCC-------CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH---HHHHHHHCCCCCCCCCEEEECC
Q ss_conf 9999831899-------955169999999999964037975899984999999---9999980999999998899768
Q 002660 614 IFVISVDCDS-------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISE---IHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 614 li~~DiDGTL-------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~---~~~~l~~l~l~~~~~d~~I~~n 681 (895)
-|++|+|||| ..++.+...+.+++|+++ |+.++|.|+|+-.. ...|+...+++ +|.+.-..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~----G~~IIi~TaR~~~~~~~t~~wL~~~~i~---yd~i~~~~ 72 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE----KHRLILWSVREGELLDEAIEWCRARGLE---FYAANKDY 72 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT----TCEEEECCSCCHHHHHHHHHHHHTTTCC---CSEESSSS
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHHHHHHHHCCCC---CEEHHCCC
T ss_conf 89997579708899976366459999999999987----9969999358886538899999981998---34501057
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.88 E-value=0.0014 Score=37.34 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=29.0
Q ss_pred HHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCCCCCCCEE-EE--ECCCC
Q ss_conf 99999999995--99845589995678997710002686508-99--56855
Q 002660 799 SQALRYLYLRW--GVELSKMVVFVGESGDTDYEGLLGGVHKT-VI--LKGIC 845 (895)
Q Consensus 799 g~ai~~l~~~~--gi~~~~~iaf~gd~nd~D~~eMl~~~~~g-Va--MgNa~ 845 (895)
..++..+.... ++++++++. +||+.. | +.|=+.+|.. |+ .|+..
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~-VGD~~~-D-i~aA~~aG~~~i~v~~g~~~ 200 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVI-IGDTEH-D-IRCARELDARSIAVATGNFT 200 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEE-EESSHH-H-HHHHHTTTCEEEEECCSSSC
T ss_pred HHHHHHHHHHCCCCCCHHHHEE-ECCCHH-H-HHHHHHCCCEEEEECCCCCC
T ss_conf 7788876530024877668023-248727-8-99999849979998079999
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.0012 Score=37.69 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=32.9
Q ss_pred CEEEEEEECCCCC--------------CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 7699998318999--------------55169999999999964037975899984999
Q 002660 612 KHIFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 612 ~kli~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
+|++|||.||||. -...+.+.++|+.|+++ |+.++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA----GYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT----TEEEEEEEECT
T ss_pred CCEEEEECCCCEEEECCCCCCCCCHHHCEECCCHHHHHHHHHHC----CCCEEEECCCC
T ss_conf 81999918897673579887428889906875599999999873----87301104643
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.27 E-value=0.0021 Score=36.24 Aligned_cols=47 Identities=19% Similarity=0.184 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEE-EECCC
Q ss_conf 999699999999995998455899956789977100026865089-95685
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV-ILKGI 844 (895)
Q Consensus 795 g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gV-aMgNa 844 (895)
.-.|...+..+++.+|+++++++. +||+.. | +..-+.+|... .+.++
T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~-igD~~~-d-i~aA~~aG~~~i~v~~G 144 (164)
T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVF-FDDENR-N-IIDVGRLGVTCIHIRDG 144 (164)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEE-EESCHH-H-HHHHHTTTCEEEECSSC
T ss_pred CCCCHHHHHHHHHHHCCCHHHEEE-ECCCHH-H-HHHHHHCCCEEEEECCC
T ss_conf 689769999999996888699798-748787-8-99999869979997999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.23 E-value=0.0053 Score=33.59 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=40.0
Q ss_pred EECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 61199996999999999959984558999567899771000268650-89956855
Q 002660 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 791 I~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~-gVaMgNa~ 845 (895)
....+-.|......+++++++++++++. +||+.. | +.+-+.+|. .|.+.++.
T Consensus 146 ~~~~~kp~p~~~~~~~~~~~~~~~~~~~-igD~~~-D-i~~A~~aG~~~i~v~~g~ 198 (224)
T d2hsza1 146 SLPEIKPHPAPFYYLCGKFGLYPKQILF-VGDSQN-D-IFAAHSAGCAVVGLTYGY 198 (224)
T ss_dssp TSSSCTTSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEEESSSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCH-HCCCHH-H-HHHHHHCCCEEEEEECCC
T ss_conf 3454432101357899886431100202-117698-9-999999099599991799
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.0082 Score=32.35 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 69999999999599845589995678997710002686508995
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaM 841 (895)
+....+.+++++|+++++++. +||+.+ | +.|=+.+|...+.
T Consensus 146 ~~~~~~~~~~~l~~~~~~~l~-igD~~~-d-i~aA~~~G~~~i~ 186 (218)
T d1te2a_ 146 HPQVYLDCAAKLGVDPLTCVA-LEDSVN-G-MIASKAARMRSIV 186 (218)
T ss_dssp STHHHHHHHHHHTSCGGGEEE-EESSHH-H-HHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCCHHCEE-EEECHH-H-HHHHHHCCCEEEE
T ss_conf 578999999972999513089-960989-9-9999983997999
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.01 E-value=0.033 Score=28.43 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=63.9
Q ss_pred HHCCCCCCCEE-EEEE-CCCCCCC--HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 21389997499-9972-7899899--899999997512546997199998149996422200289999999999862999
Q 002660 306 RFFTNPRKPVI-LALA-RPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 306 ~~~~~~~~~~i-l~vg-rl~~~Kg--i~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 381 (895)
.+....+++.| +..| +....|. .+...+....+.+ ....+ +++|+..+ .+....+..........
T Consensus 173 ~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~--~~~~i-vl~g~~~e--------~~~~~~~~~~~~~~~~~ 241 (348)
T d1pswa_ 173 QFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQV-VLFGSAKD--------HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEE-EECCCGGG--------HHHHHHHHTTSCHHHHT
T ss_pred HHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHH--CCCCC-CCCCCCCH--------HHHHHHHHHHHHCCCCC
T ss_conf 733355787699535532232216446777666777764--48742-22444105--------99988888763101465
Q ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC
Q ss_conf 96884999998989999998122994999469999996699999990998998188
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 437 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVIas~~ 437 (895)
..+.+.|..+..++.++++.| |++|-+. ...+.-|.++|+|+|+-..
T Consensus 242 ~~~~l~g~~sl~el~~li~~a----~l~I~~D-----tg~~HlAaa~g~p~i~lfg 288 (348)
T d1pswa_ 242 WCRNLAGETQLDQAVILIAAC----KAIVTND-----SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTS----SEEEEES-----SHHHHHHHHTTCCEEEEES
T ss_pred CCCCCCCCCCHHHHHHHHHCC----EEEEECC-----CCHHHHHHHCCCCEEEEEC
T ss_conf 333555774378899987433----0576158-----6088999982999899978
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=95.92 E-value=0.00069 Score=39.37 Aligned_cols=40 Identities=13% Similarity=0.060 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 16999999999996403797589998499999999999809999
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+.+.++++++.|++. |+.++++||++...+...++.+|+.
T Consensus 216 p~~~v~~~l~~lk~a----Gi~v~i~Tg~~~~~a~~il~~lgl~ 255 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGA----GFELGIATGRPYTETVVPFENLGLL 255 (380)
T ss_dssp CHHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 436399999999987----9959998899799999999981995
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.90 E-value=0.0056 Score=33.45 Aligned_cols=44 Identities=16% Similarity=-0.008 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 999999999959984558999567899771000268650-89956855
Q 002660 799 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 799 g~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~-gVaMgNa~ 845 (895)
...+...++.+++++++++. +||+.+ | +++=+.+|. ++.+.++.
T Consensus 132 p~ml~~a~~~~~i~~~~~~~-VGD~~~-D-i~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLI-VGDKLA-D-MQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEETCC
T ss_pred CHHHHHHHHHHCCCCCCEEE-ECCCHH-H-HHHHHHCCCCEEEEECCC
T ss_conf 01566767773899412689-579788-9-999998799489994899
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.012 Score=31.16 Aligned_cols=43 Identities=9% Similarity=0.110 Sum_probs=33.7
Q ss_pred CEEEEEEECCCCC-----------CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
Q ss_conf 7699998318999-----------5516999999999996403797589998499999
Q 002660 612 KHIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS 658 (895)
Q Consensus 612 ~kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~ 658 (895)
.+.+|||.||||. -+..+.+.++++.|+++ |..++++|..+-.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~----g~~~~ivTNq~~i 55 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM----GFALVVVTNQSGI 55 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT----TCEEEEEEECTHH
T ss_pred CCEEEEECCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHC----CCHHHHHHCCCHH
T ss_conf 98899948998548899899889936887899999998661----8416666422023
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.25 E-value=0.046 Score=27.43 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE-EEECCCC
Q ss_conf 9969999999999599845589995678997710002686508-9956855
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT-VILKGIC 845 (895)
Q Consensus 796 ~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~g-VaMgNa~ 845 (895)
=.+...++.+++++|+++++++. +||+.. | +.+-+.+|.. |.+.+..
T Consensus 137 Kp~~~~~~~~~~~~~~~p~~~l~-VgD~~~-D-i~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 137 KPSPEAATYLLDKYQLNSDNTYY-IGDRTL-D-VEFAQNSGIQSINFLEST 184 (204)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEESSCCS
T ss_pred CHHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCCC
T ss_conf 02578889999982999751899-947989-9-999998699699984799
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.40 E-value=0.025 Score=29.22 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=30.9
Q ss_pred CCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 9996--999999999959984558999567899771000268650899568
Q 002660 795 LASR--SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 795 g~sK--g~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgN 843 (895)
+..| ....+..+++++++ +++. +||+.. | +.+-+.+|.-.+.=+
T Consensus 131 ~~~KP~p~~~~~~~~~~~~~--~~l~-vgDs~~-D-i~aA~~aG~~~i~v~ 176 (187)
T d2fi1a1 131 FKRKPNPESMLYLREKYQIS--SGLV-IGDRPI-D-IEAGQAAGLDTHLFT 176 (187)
T ss_dssp CCCTTSCHHHHHHHHHTTCS--SEEE-EESSHH-H-HHHHHHTTCEEEECS
T ss_pred CCCCCCHHHHHHHHHHCCCC--CEEE-EECCHH-H-HHHHHHCCCEEEEEC
T ss_conf 45688899999999984999--7699-907999-9-999998599799999
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.38 E-value=0.072 Score=26.18 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 6999999999959984558999567899771000268650-89956855
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 798 Kg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~-gVaMgNa~ 845 (895)
........++++++++++++. +||+.. | +.+=+.+|. +|.+.+..
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~-IgD~~~-D-i~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVF-LDDFGS-N-LKPARDMGMVTILVHNTA 204 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEE-EESSST-T-THHHHHHTCEEEECCSSS
T ss_pred CHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCCC
T ss_conf 827777888872898632899-977988-7-999998599899989940
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=94.27 E-value=0.037 Score=28.05 Aligned_cols=56 Identities=7% Similarity=-0.028 Sum_probs=42.4
Q ss_pred CCCEEEEEEECCCCCC-------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 5576999983189995-------------51699999999999640379758999849999999999980999
Q 002660 610 RRKHIFVISVDCDSTT-------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~-------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..-|+++||+||+||. .....=-..+..+++. ++.+++.||+....+.....++++
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~----gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA----DIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT----TCEEEEEESCCCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHH----CEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 237199981677506886999389979999977604888787652----178999669844678998763212
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.91 E-value=0.027 Score=28.93 Aligned_cols=66 Identities=12% Similarity=0.180 Sum_probs=44.4
Q ss_pred CCCCEEEEEEECCCC--C--C----------C-HHHHHHHHHHHHHHHCCCCCEEEEEECCC--------CHHHH----H
Q ss_conf 355769999831899--9--5----------5-16999999999996403797589998499--------99999----9
Q 002660 609 RRRKHIFVISVDCDS--T--T----------G-LLDATKKICEAVEKERTEGSIGFILSTSM--------TISEI----H 661 (895)
Q Consensus 609 ~~~~kli~~DiDGTL--~--~----------~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR--------~~~~~----~ 661 (895)
...+|+++||.|||| + . . ..+.+.++|+.|.++ |..++|+|-- +...+ .
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~----gy~iiIvTNQ~gI~rg~~s~~~~~~~~~ 93 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE----GYKLVIFTNQMGIGRGKLPAEVFKGKVE 93 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH----TCEEEEEEECHHHHHTSSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCCHHHHHHHHHHC----CCEEEEECCCCHHCCCCCCHHHHHHHHH
T ss_conf 876808999789951754899867898466345167799999999867----8479995276301048769999999999
Q ss_pred HHHHHCCCCCCCCCEEEECC
Q ss_conf 99980999999998899768
Q 002660 662 SFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 662 ~~l~~l~l~~~~~d~~I~~n 681 (895)
.++++++.+ .+.++|.+
T Consensus 94 ~i~~~l~~~---~~i~~~~~ 110 (195)
T d1yj5a1 94 AVLEKLGVP---FQVLVATH 110 (195)
T ss_dssp HHHHHHTSC---CEEEEECS
T ss_pred HHHHHCCCC---CCEEEECC
T ss_conf 999986998---64898157
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=93.81 E-value=0.13 Score=24.46 Aligned_cols=45 Identities=16% Similarity=0.076 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 999969999999999599845589995678997710002686508995
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 794 ~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaM 841 (895)
.+-.+...++.+++++|+++++++. +||+.. | +.+=+.+|...+.
T Consensus 135 ~~KP~p~~~~~~~~~~~~~~~~~l~-VgDs~~-D-i~~a~~aG~~~i~ 179 (207)
T d2hdoa1 135 KRKPDPLPLLTALEKVNVAPQNALF-IGDSVS-D-EQTAQAANVDFGL 179 (207)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEE
T ss_pred CCHHHHHHHCCCCCCEEEECCCEEE-ECCCHH-H-HHHHHHCCCEEEE
T ss_conf 2103444300234210451134068-547787-8-9999984992999
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=90.93 E-value=0.27 Score=22.43 Aligned_cols=50 Identities=8% Similarity=0.063 Sum_probs=38.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 88611999969999999999599845589995678997710002686508995
Q 002660 789 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 789 lEI~p~g~sKg~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaM 841 (895)
.|....+--+.......++++|+++++++. +||+.+ | +..=+.+|...+.
T Consensus 177 ~d~~~~~KP~p~~~~~~~~~~~~~p~~~l~-vgD~~~-d-v~aA~~aG~~ti~ 226 (253)
T d1zs9a1 177 FDTKIGHKVESESYRKIADSIGCSTNNILF-LTDVTR-E-ASAAEEADVHVAV 226 (253)
T ss_dssp ECGGGCCTTCHHHHHHHHHHHTSCGGGEEE-EESCHH-H-HHHHHHTTCEEEE
T ss_pred ECCCCCCCCCCHHHHHHHHHHCCCCCCEEE-EECCHH-H-HHHHHHCCCEEEE
T ss_conf 024533577808889999994899674899-947999-9-9999985997999
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=90.64 E-value=0.31 Score=22.00 Aligned_cols=55 Identities=7% Similarity=0.076 Sum_probs=38.7
Q ss_pred CEEEEEEECCCC--C-----------------------------------CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 769999831899--9-----------------------------------551699999999999640379758999849
Q 002660 612 KHIFVISVDCDS--T-----------------------------------TGLLDATKKICEAVEKERTEGSIGFILSTS 654 (895)
Q Consensus 612 ~kli~~DiDGTL--~-----------------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG 654 (895)
...|+||+|-|+ + ..+.+..+++++.++++ |+.++.+||
T Consensus 35 P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~----Gv~IfyVTn 110 (209)
T d2b82a1 35 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR----GDAIFFVTG 110 (209)
T ss_dssp CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH----TCEEEEEEC
T ss_pred CCEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEEC
T ss_conf 8468970314432383888766540376766556787413877612443467662499999999975----974999938
Q ss_pred CCHH---HHHHHH-HHCCCC
Q ss_conf 9999---999999-809999
Q 002660 655 MTIS---EIHSFL-VSGHLS 670 (895)
Q Consensus 655 R~~~---~~~~~l-~~l~l~ 670 (895)
|+.. .....+ +.+|++
T Consensus 111 R~~~~~e~T~~nL~K~lG~p 130 (209)
T d2b82a1 111 RSPTKTETVSKTLADNFHIP 130 (209)
T ss_dssp SCCCSSCCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHCCCC
T ss_conf 84565799999999871987
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=88.94 E-value=0.44 Score=21.07 Aligned_cols=47 Identities=11% Similarity=-0.007 Sum_probs=34.9
Q ss_pred CCCCHH--HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 999969--99999999959984558999567899771000268650899568
Q 002660 794 VLASRS--QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 794 ~g~sKg--~ai~~l~~~~gi~~~~~iaf~gd~nd~D~~eMl~~~~~gVaMgN 843 (895)
.+..|- ...++.++++|+++++++. +||+.. | +..=+.+|...+.-|
T Consensus 145 ~~~~KP~p~~~~~~~~~~g~~p~e~l~-VgD~~~-D-i~~A~~aG~~~v~v~ 193 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQALGLDRSAILF-VASNAW-D-ATGARYFGFPTCWIN 193 (220)
T ss_dssp GTCCTTSHHHHHHHHHHHTSCGGGEEE-EESCHH-H-HHHHHHHTCCEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEEC
T ss_conf 001450778899999981778714899-804837-6-999998699799981
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=87.35 E-value=0.34 Score=21.75 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=25.4
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
Q ss_conf 1067533204444567656888899984157999999998059991179995268
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 57 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~vvt~~ 57 (895)
||+||.|+.|.- +.++| +-.....+++.| ++|.+++..
T Consensus 1 m~~VLvi~aHPD----De~lg-----------~GGtiak~~~~G--~~V~vv~~T 38 (227)
T d1uana_ 1 MLDLLVVAPHPD----DGELG-----------CGGTLARAKAEG--LSTGILDLT 38 (227)
T ss_dssp CEEEEEEESSTT----HHHHH-----------HHHHHHHHHHTT--CCEEEEEEE
T ss_pred CCEEEEEEECCC----HHHHH-----------HHHHHHHHHHCC--CEEEEEEEE
T ss_conf 964999974887----57887-----------899999999769--939999974
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.37 E-value=0.62 Score=20.08 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=29.2
Q ss_pred CCCCCHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 1999969999999999599--8455899956789977100026865
Q 002660 793 PVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 793 p~g~sKg~ai~~l~~~~gi--~~~~~iaf~gd~nd~D~~eMl~~~~ 836 (895)
+...+|+..+.....++.. +.+++++ +||+-+ | +.|..++.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~-iGDs~~-D-l~Ma~g~~ 244 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIIL-LGDSQG-D-LRMADGVA 244 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEE-EESSSG-G-GGTTTTCS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCEEE-EECCHH-H-HHHHHCCC
T ss_conf 4345686315445998853278676899-967776-8-99983885
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.42 E-value=0.84 Score=19.22 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=41.5
Q ss_pred CCCCEEEEEEECCCCCC--------------------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
Q ss_conf 35576999983189995--------------------------5169999999999964037975899984999999999
Q 002660 609 RRRKHIFVISVDCDSTT--------------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHS 662 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~--------------------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~ 662 (895)
...++.+++|+|+||-+ ..-+.+.+.|+.+.+. ..++|-|.=+...+..
T Consensus 12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-----yei~I~Ta~~~~YA~~ 86 (181)
T d1ta0a_ 12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-----FECVLFTASLAKYADP 86 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-----SEEEEECSSCHHHHHH
T ss_pred CCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHC-----EEEEEECCCCHHHHHH
T ss_conf 68981899968997785426788776641000012101334786398899999999860-----0899983871778999
Q ss_pred HHHHCC
Q ss_conf 998099
Q 002660 663 FLVSGH 668 (895)
Q Consensus 663 ~l~~l~ 668 (895)
++..+.
T Consensus 87 il~~ld 92 (181)
T d1ta0a_ 87 VADLLD 92 (181)
T ss_dssp HHHHHC
T ss_pred HHHHHC
T ss_conf 999865
|