Citrus Sinensis ID: 002684
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 893 | ||||||
| 255573801 | 985 | conserved hypothetical protein [Ricinus | 0.968 | 0.878 | 0.837 | 0.0 | |
| 359483090 | 980 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.881 | 0.830 | 0.0 | |
| 224087367 | 949 | predicted protein [Populus trichocarpa] | 0.983 | 0.925 | 0.795 | 0.0 | |
| 297793327 | 945 | hypothetical protein ARALYDRAFT_918999 [ | 0.988 | 0.934 | 0.761 | 0.0 | |
| 42568619 | 945 | uncharacterized protein [Arabidopsis tha | 0.985 | 0.931 | 0.763 | 0.0 | |
| 449442649 | 957 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.897 | 0.785 | 0.0 | |
| 9759536 | 932 | unnamed protein product [Arabidopsis tha | 0.959 | 0.919 | 0.735 | 0.0 | |
| 356495039 | 948 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.921 | 0.758 | 0.0 | |
| 356527439 | 956 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.908 | 0.752 | 0.0 | |
| 357148985 | 946 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.908 | 0.626 | 0.0 |
| >gi|255573801|ref|XP_002527820.1| conserved hypothetical protein [Ricinus communis] gi|223532794|gb|EEF34572.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1534 bits (3971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/872 (83%), Positives = 805/872 (92%), Gaps = 7/872 (0%)
Query: 27 SYGSPSRKSGR-SSVFSLFNLRERSRFWSESVIRGDFDDLQSSSPGRVGVLNYTRAGNIA 85
S + SRK+GR SSVFSLFNL+E+SRFW+E+VIRGDFDDL+S SPG+ G +NYT+AGNIA
Sbjct: 70 SGSNGSRKTGRLSSVFSLFNLKEKSRFWNEAVIRGDFDDLKSLSPGKAGAINYTKAGNIA 129
Query: 86 NYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDELERWFLKIDHIFEHTRVPPIGE 145
NYL L EVDS+YLPVPVNFIFIGFEG GNQ+F+LHP+ELERWF KIDH+FEHTR+P IGE
Sbjct: 130 NYLMLQEVDSLYLPVPVNFIFIGFEGKGNQEFKLHPEELERWFTKIDHVFEHTRIPQIGE 189
Query: 146 VLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEKVTSVFEHAIKVLARKDDVSTNR 205
VL PFY+ S+DK QRHHLP ISHINYNFSVHAIQMGEKVTS+FEHAI +LARKDDVS N
Sbjct: 190 VLTPFYKISIDKEQRHHLPIISHINYNFSVHAIQMGEKVTSIFEHAINILARKDDVSGNS 249
Query: 206 DDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNPKHE-KRARYGYRRGLSDSEITF 264
+D D LWQVDV MMD+LFTSLVDYLQLENAYNIFILNPKH+ KRA+YGYRRGLS+SEI F
Sbjct: 250 NDEDVLWQVDVDMMDILFTSLVDYLQLENAYNIFILNPKHDLKRAKYGYRRGLSESEINF 309
Query: 265 LKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMMKFSWTIAEDTDTAEWYNICLDP 324
LKENK LQTKIL+S IPESIL L+KI+RPLYEKHPM KF+WTI EDTDT EWYNICL+
Sbjct: 310 LKENKSLQTKILKSETIPESILELEKIKRPLYEKHPMTKFAWTITEDTDTVEWYNICLNA 369
Query: 325 LNNVEKFYRGKETADIIQSKVLQLLKGKNEDLKFLLEKELKSGDLSNLHAECLTDSWIGN 384
LNNVEK Y+GK+T+DIIQ+KV QLLKGKNED+K LLEK LKSGD + H ECLTD+WIG
Sbjct: 370 LNNVEKLYQGKDTSDIIQNKVHQLLKGKNEDMK-LLEKYLKSGDFGDFHTECLTDTWIGR 428
Query: 385 NRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIGAVEEISEDEAEDRLQDAIQEKF 444
+RWAFIDLTAGPFSWGPAVGGEGVRTELSLPNV KTIGAV EISEDEAEDRLQ+AIQEKF
Sbjct: 429 DRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVTKTIGAVAEISEDEAEDRLQEAIQEKF 488
Query: 445 AVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEE 504
AVFG+KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEE
Sbjct: 489 AVFGNKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEE 548
Query: 505 YDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIA 564
YDE+HK+KAIEAL+RMENWNLFSDT+EEFQNYTVARDTFLAHLGATLWGSMRH+ISPSIA
Sbjct: 549 YDESHKKKAIEALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWGSMRHIISPSIA 608
Query: 565 DGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSLLLPSQKPVFSQRMLTLSE 624
DGAFHYYE ISFQLFFITQEKVR VKQLPV+LK+LMDGLSSLLLPSQK +FSQ +L+LSE
Sbjct: 609 DGAFHYYEKISFQLFFITQEKVRNVKQLPVDLKALMDGLSSLLLPSQKAMFSQNLLSLSE 668
Query: 625 DPALAMAFSVARRAAAVPMLLVNGTYRKTVRSYVDSAILQYQLQRMNDRDSLKGAHAHSR 684
D ALAMAFSVARRAAAVP+LLVNGTYRKT+RSY+DS+I+QYQLQR+ND SL+GAHAHSR
Sbjct: 669 DSALAMAFSVARRAAAVPLLLVNGTYRKTIRSYLDSSIIQYQLQRLNDHVSLRGAHAHSR 728
Query: 685 STLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEEPSWESHLQCNGQSLLWDLRSPI 744
STLEVPIFWFI+G+PLLVDKHYQAKAL DMVI+VQSE SWESHLQCNGQSLLWDLR PI
Sbjct: 729 STLEVPIFWFIYGEPLLVDKHYQAKALMDMVIIVQSEPSSWESHLQCNGQSLLWDLRRPI 788
Query: 745 KAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDTIAR 804
KAA+A+VSEHLAGLLPLHLVYS AHETAIEDWIWSVGCN FSITS+GWHISQFQSDTIAR
Sbjct: 789 KAAMAAVSEHLAGLLPLHLVYSHAHETAIEDWIWSVGCNLFSITSRGWHISQFQSDTIAR 848
Query: 805 SYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQERELVNKYNYVVSLWRRISTVTG 864
SYII+TLEESIQ +NSAI LLMERT+EKTF+LFQS+E+ELVNKYNYVVSLWRRIS++TG
Sbjct: 849 SYIITTLEESIQLINSAIRRLLMERTSEKTFRLFQSKEQELVNKYNYVVSLWRRISSITG 908
Query: 865 DLRYADAMRQLYTLEDASKGYGD----TVALL 892
+L Y DAMR LYTLEDA+KG+ D T+ALL
Sbjct: 909 ELHYVDAMRLLYTLEDAAKGFSDQVNATIALL 940
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483090|ref|XP_002274115.2| PREDICTED: uncharacterized protein LOC100255062 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224087367|ref|XP_002308138.1| predicted protein [Populus trichocarpa] gi|222854114|gb|EEE91661.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297793327|ref|XP_002864548.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] gi|297310383|gb|EFH40807.1| hypothetical protein ARALYDRAFT_918999 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|42568619|ref|NP_200618.3| uncharacterized protein [Arabidopsis thaliana] gi|332009614|gb|AED96997.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449442649|ref|XP_004139093.1| PREDICTED: uncharacterized protein LOC101207480 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|9759536|dbj|BAB11002.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356495039|ref|XP_003516388.1| PREDICTED: uncharacterized protein LOC100779643 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356527439|ref|XP_003532318.1| PREDICTED: uncharacterized protein LOC100800000 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357148985|ref|XP_003574960.1| PREDICTED: uncharacterized protein LOC100835558 [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 893 | ||||||
| TAIR|locus:2155846 | 945 | AT5G58100 [Arabidopsis thalian | 0.985 | 0.931 | 0.723 | 0.0 | |
| DICTYBASE|DDB_G0285083 | 1020 | DDB_G0285083 [Dictyostelium di | 0.220 | 0.193 | 0.339 | 6e-60 | |
| TAIR|locus:2098423 | 687 | AT3G28720 "AT3G28720" [Arabido | 0.309 | 0.401 | 0.247 | 3.4e-12 | |
| DICTYBASE|DDB_G0273745 | 808 | DDB_G0273745 "transmembrane pr | 0.170 | 0.188 | 0.239 | 1.5e-08 | |
| DICTYBASE|DDB_G0273189 | 808 | DDB_G0273189 "transmembrane pr | 0.170 | 0.188 | 0.239 | 1.5e-08 | |
| DICTYBASE|DDB_G0279945 | 641 | DDB_G0279945 [Dictyostelium di | 0.372 | 0.519 | 0.219 | 2e-08 |
| TAIR|locus:2155846 AT5G58100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3418 (1208.3 bits), Expect = 0., P = 0.
Identities = 639/883 (72%), Positives = 741/883 (83%)
Query: 6 SHTISTFSFFICLLLLF--QAXXXXXXXXXXXXXXXXXXLFNLRERSRFWSESVIRGDFD 63
+ ++S IC+ +LF LFNLR++SRFWSESV R DFD
Sbjct: 8 NRSVSKLVLTICVAILFIPSLSYGASQGNRKTAKSSVFSLFNLRDKSRFWSESVFRTDFD 67
Query: 64 DLQSSSPGRVGVLNYTRAGNIANYLKLMEVDSMYLPVPVNFIFIGFEGNGNQDFQLHPDE 123
DL+SS GVLNYT++GNIA+YL+LMEVDS+YLPVPVNFIFIGFEG GNQDF+L P+E
Sbjct: 68 DLESSVHSNSGVLNYTKSGNIASYLELMEVDSVYLPVPVNFIFIGFEGKGNQDFKLRPEE 127
Query: 124 LERWFLKIDHIFEHTRVPPIGEVLAPFYRTSVDKVQRHHLPTISHINYNFSVHAIQMGEK 183
LERWF K+DH+FEHTRVP I EVL PFY+ +++K +HHLP IS +NYNFSVHAIQMGEK
Sbjct: 128 LERWFNKLDHMFEHTRVPQIKEVLNPFYKINIEKEVQHHLPIISRVNYNFSVHAIQMGEK 187
Query: 184 VTSVFEHAIKVLARKDDVSTNRDDVDALWQVDVSMMDVLFTSLVDYLQLENAYNIFILNP 243
VTSV EHAIKVLARKDDV+TN+D+ AL QVD MM+ +FTSLV+Y LE+AYN+FILNP
Sbjct: 188 VTSVIEHAIKVLARKDDVATNKDEESALLQVDAEMMEFIFTSLVEYFHLEDAYNLFILNP 247
Query: 244 KHE-KRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESILALDKIRRPLYEKHPMM 302
KH+ K+A+YGYRRG S+SEI++LKENK++ +LQSG E+ILA D +R+PLY++HPM+
Sbjct: 248 KHDNKKAKYGYRRGFSESEISYLKENKEILKNLLQSGKPSENILAFDMVRKPLYDRHPML 307
Query: 303 KFSWTIAEDTDTAEWYNICLDPLNNVEKFYRGKETADIIQSKVLQLLKGXXXXXXXXXXX 362
KFSWT AE+TDTAEW+N C D LN +E+ GK+ A++IQSKVLQLL+G
Sbjct: 308 KFSWTNAEETDTAEWFNACQDALNKLEQLSLGKDAAELIQSKVLQLLRGKNEDMKVFLEK 367
Query: 363 XXXSGDLSNLHAECLTDSWIGNNRWAFIDLTAGPFSWGPAVGGEGVRTELSLPNVGKTIG 422
+GD SNL+AECLTD WIG RWAFIDLTAGPFSWGP+VGGEGVRTELSLPNVG TIG
Sbjct: 368 DLRAGDFSNLNAECLTDIWIGKGRWAFIDLTAGPFSWGPSVGGEGVRTELSLPNVGTTIG 427
Query: 423 AVEEISEDEAEDRLQDAIQEKFAVFGDKDHQAIDILLAEIDIYELFAFKHCKGRKVKLAL 482
AV EISEDEAED+LQ AIQ+KF+VFG+ DHQA+DILLAEID+YELFAFKHCKGRKVKLAL
Sbjct: 428 AVAEISEDEAEDKLQTAIQDKFSVFGENDHQAVDILLAEIDVYELFAFKHCKGRKVKLAL 487
Query: 483 CEELDERMQDLKNELQSFEGEEYDENHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDT 542
CEELDERM+DLK ELQSF+GEEYDE HKRKA++ALRRME+WNLFSD EEFQNYTVARDT
Sbjct: 488 CEELDERMRDLKTELQSFDGEEYDETHKRKAMDALRRMESWNLFSDEREEFQNYTVARDT 547
Query: 543 FLAHLGATLWGSMRHVISPSIADGAFHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDG 602
FLAHLGATLWGSMRH+ISPS+ADGAFH+YE ISFQL FITQEKVRQ+KQLPV+LK+LMDG
Sbjct: 548 FLAHLGATLWGSMRHIISPSVADGAFHHYEKISFQLVFITQEKVRQIKQLPVDLKALMDG 607
Query: 603 LSSLLLPSQKPVFSQRMLTLSEDPXXXXXXXXXXXXXXXPMLLVNGTYRKTVRSYVDSAI 662
LSSLLLPSQKP+FSQ MLTLSEDP P+LLVNGTYRKTVRSY+DS+I
Sbjct: 608 LSSLLLPSQKPLFSQHMLTLSEDPALAMAFSVARRAAAVPLLLVNGTYRKTVRSYLDSSI 667
Query: 663 LQYQLQRMNDRDSLKGAHAHSRSTLEVPIFWFIHGDPLLVDKHYQAKALSDMVIVVQSEE 722
LQYQLQR+ND SLKG HAHSRSTLE+PIFW I GDPLL+DKHYQAKALS+MV+VVQSE
Sbjct: 668 LQYQLQRVNDHTSLKGGHAHSRSTLEIPIFWLISGDPLLIDKHYQAKALSNMVVVVQSEA 727
Query: 723 PSWESHLQCNGQSLLWDLRSPIKAALASVSEHLAGLLPLHLVYSQAHETAIEDWIWSVGC 782
SWESHLQCNG+SLLWDLRSP+KAA+ASV+EHLAGLLPLHLVYS AHE+AIEDW WSVGC
Sbjct: 728 SSWESHLQCNGRSLLWDLRSPVKAAMASVAEHLAGLLPLHLVYSVAHESAIEDWTWSVGC 787
Query: 783 NPFSITSQGWHISQFQSDTIARSYIISTLEESIQTVNSAIHLLLMERTTEKTFKLFQSQE 842
NPFS+TSQGW +SQFQSDTIARSY+I+ LEESIQ VNS IHLL +ERT +KTFKLFQS+E
Sbjct: 788 NPFSVTSQGWLLSQFQSDTIARSYMITALEESIQAVNSGIHLLRLERTNKKTFKLFQSRE 847
Query: 843 RELVNKYNYVVSLWRRISTVTGDLRYADAMRQLYTLEDASKGY 885
REL+NKY YVVSLWRR+S V G+ RY DAMR L+TLE+A+ +
Sbjct: 848 RELMNKYKYVVSLWRRLSNVAGETRYGDAMRFLHTLEEATSSF 890
|
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| DICTYBASE|DDB_G0285083 DDB_G0285083 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098423 AT3G28720 "AT3G28720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0273745 DDB_G0273745 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0273189 DDB_G0273189 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279945 DDB_G0279945 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 893 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.0 bits (191), Expect = 8e-15
Identities = 83/653 (12%), Positives = 189/653 (28%), Gaps = 159/653 (24%)
Query: 75 VLNYTRAGNIANYLKLMEVDSMY-LPVPVN---FIFIGFEGNGNQDFQLHPDELER---- 126
V + + + L E+D + V+ +F + Q +E+ R
Sbjct: 38 VQDMPK-----SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 127 WFL-------------KIDHIFEHTRVPPIGEVLAPFYRTSVDKVQ--RHHLPTISHINY 171
+ + +I + R+ +V A + + + R L +
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 172 NFSVHAIQMGE--KVTSVFEHAIKVLARKDDVSTNRDDVDALWQVDV----SMMDVLFTS 225
+ + K + A+ V V D W +++ S VL
Sbjct: 153 -VLIDG--VLGSGK--TWV--ALDVC-LSYKVQCKMDF-KIFW-LNLKNCNSPETVL--- 199
Query: 226 LVDYLQLENAYNIFILNPKHEKRARYGYRRGLSDSEITFLKENKDLQTKILQSGNIPESI 285
L+ + ++P R+ + S + + + ++L+S +
Sbjct: 200 ----EMLQKLL--YQIDPNWTSRSDH------SSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 286 LALDKIRRPLYEKHPMMKFSWTI------AEDTDTAEWYNICLDPLNNVEKFYRGKETAD 339
L L ++ S I + TD L++ E
Sbjct: 248 LVLLNVQNAKAWNA--FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 340 IIQSKVLQLLKGKNEDLKFLLEKELKSGD--LSNLHAECLTDSWIGNNRWAFIDLTAGPF 397
++ K L + +DL +E+ + + ++ AE + D G W
Sbjct: 306 LL-LKYLDC---RPQDLP----REVLTTNPRRLSIIAESIRD---GLATWDN-------- 346
Query: 398 SWGPAVGGEGVRTELSLPNVGKTIGA-VEEISEDEAEDRLQDAIQEKFAVFGDKD----H 452
W ++ + I + + + E +VF
Sbjct: 347 -W----------KHVNCDKLTTIIESSLNVLEPAEYRKMFDR-----LSVF-PPSAHIPT 389
Query: 453 QAIDILLAEIDIYELFAF-KHCKGRKVKLALCEELDERMQ----DLKNELQSFEGEEYDE 507
+ ++ ++ ++ K +L E+ + + EL+ + E
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKL----HKYSLVEKQPKESTISIPSIYLELKV-KLENEYA 444
Query: 508 NHKRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWGSMRHVISPSIADGA 567
H R ++ + ++ Y F +H+G H+ + +
Sbjct: 445 LH-RSIVDHYNIPKTFDSDDLIPPYLDQY------FYSHIG-------HHLKNIEHPE-R 489
Query: 568 FHYYETISFQLFFITQEKVRQVKQLPVNLKSLMDGLSSL-----LLPSQKPVFSQRMLTL 622
+ + F+ ++K+R S+++ L L + P + + + +
Sbjct: 490 MTLFRMVFLDFRFL-EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548
Query: 623 SEDPALAMAFSVARRAAAVPMLLVNGTYRKTVR---SYVDSAILQ---YQLQR 669
+ F + L+ Y +R D AI + Q+QR
Sbjct: 549 -------LDFL--PKIEEN---LICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00