Citrus Sinensis ID: 002743
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 1.0 | 0.930 | 0.895 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | yes | no | 1.0 | 0.932 | 0.881 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 1.0 | 0.929 | 0.881 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 1.0 | 0.930 | 0.869 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 1.0 | 0.932 | 0.867 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.998 | 0.932 | 0.870 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.995 | 0.929 | 0.850 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.996 | 0.929 | 0.845 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 1.0 | 0.927 | 0.842 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.998 | 0.931 | 0.848 | 0.0 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1609 bits (4166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/887 (89%), Positives = 850/887 (95%), Gaps = 2/887 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AAIMAIALANGGG+ PDW+DFVGIIVLLVINSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 125 MANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ VLTAIG
Sbjct: 185 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGIV EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+L
Sbjct: 245 NFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGV+K+HV+LLAAR
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAAR 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+DGNWHRASKG
Sbjct: 365 ASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDV++KVHAVIDK+AERGLRSL VARQE+PEK+KES G PWQ VGLLP
Sbjct: 425 APEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KDA
Sbjct: 485 LFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDA 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
S+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPALKKADIGIA
Sbjct: 545 SLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+LIA
Sbjct: 605 VADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLGSYLA+MT
Sbjct: 665 LIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW M KTDFF+D FGVRS+R EMM+ALYLQVSI+SQALIFVTRSRSWSFIERPG
Sbjct: 725 VIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL TAF++AQLVATF+AVYANW FARI+G GWGWAGVIWLYS+V YFPLDI KF IR++
Sbjct: 785 LLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFV 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE--TNGIFSDKNSYRE 838
LSG+AWD LLENK AFTTKKDYG+EEREAQWA AQRTLHGLQPPE +N +F+DK+SYRE
Sbjct: 845 LSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRE 904
Query: 839 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
LSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTIQQ+YTV
Sbjct: 905 LSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1605 bits (4155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/885 (88%), Positives = 834/885 (94%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AA+MAIALANGGGR PDWQDFVGI+ LL+INSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTGE
Sbjct: 125 MAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
S+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+IG
Sbjct: 185 SIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHRL
Sbjct: 245 NFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAAR
Sbjct: 305 FQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAAR 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASKG
Sbjct: 365 ASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLLP
Sbjct: 425 APEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD+
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDS 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKKADIGIA
Sbjct: 545 SLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
V DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 605 VVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+MT
Sbjct: 665 LIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E PG
Sbjct: 725 VVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY+
Sbjct: 785 LLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYV 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQP E N IF++KNSY ELS
Sbjct: 845 LSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 905 QIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1593 bits (4124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/885 (88%), Positives = 841/885 (95%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAIALANG G+ PDWQDF+GII LLVINSTISFIEENNAGNAAAAL
Sbjct: 68 MWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAAAAL 127
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRWSEQ+A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLTAIG
Sbjct: 188 SLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+G++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KE+V+LLAAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVLLLAAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++ NWHRASKG
Sbjct: 368 ASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRASKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCN +EDVR+KVH+++DK+AERGLRSL VAR+ +PEK+KESPG W+ VGLLP
Sbjct: 428 APEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEFVGLLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLGQDKD+
Sbjct: 488 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDS 547
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+IA+LP++ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGIA
Sbjct: 548 AIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 607
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 608 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 667
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y A+MT
Sbjct: 668 LIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYQALMT 727
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW M TDFFSD FGV+SLR +EMM+ALYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 728 VVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSFLERPG 787
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
+LL AF+IAQLVAT IAVYANW+FAR++GCGWGWAGVIWLYS++ Y PLDI+KF IRYI
Sbjct: 788 MLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYI 847
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW+ LL+NKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPE +F++KNSYRELS
Sbjct: 848 LSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYRELS 907
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 908 EIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1561 bits (4042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/887 (86%), Positives = 838/887 (94%), Gaps = 2/887 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AAIMAIALANGGG+ PDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MANLAPKTKVLRDGRW EQ+ASILVPGD++SIKLGDIVPADARLLEGDPLKIDQS LTGE
Sbjct: 125 MANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ+VLTAIG
Sbjct: 185 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCI SIAVGIV EII+M+P+Q RKYR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+L
Sbjct: 245 NFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VD+NL+EVFAKGV+KEHV+LLAAR
Sbjct: 305 SQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAAR 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNP DKRTALTYID++GNWHRASKG
Sbjct: 365 ASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCNC+EDV++KVH+VI+K+AERGLRSL VARQE+PEK+K+SPG PWQ +GLLP
Sbjct: 425 APEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 485 LFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDG 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPALKKADIGIA
Sbjct: 545 SLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
V DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGFMLIA
Sbjct: 605 VDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+YLA++T
Sbjct: 665 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALVT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWL+ KTDFF++ FGV S+R + M+ALYLQVSI+SQALIFVTRSRSWSF+ERPG
Sbjct: 725 VVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSRSWSFVERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL TAF++AQLVAT IAVYANW FARI+G GWGWAGVIWL+S+V YFPLDI KF IR++
Sbjct: 785 FLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFV 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE--TNGIFSDKNSYRE 838
LSG+AWD LL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE ++ +F+DK+SYRE
Sbjct: 845 LSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRE 904
Query: 839 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
LSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV
Sbjct: 905 LSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1549 bits (4011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/885 (86%), Positives = 822/885 (92%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAIALANG R PDWQDFVGII LLVINSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+IG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 245 NFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLLP
Sbjct: 425 APEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD+
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDS 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGIA
Sbjct: 545 NIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM+
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIMS 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRYI
Sbjct: 785 ALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYI 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW +L +N+TAFTTKKDYG EREAQWA AQRTLHGLQP E IF +K SYRELS
Sbjct: 845 LSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYRELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDIDT HYTV
Sbjct: 905 EIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1544 bits (3998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/885 (87%), Positives = 816/885 (92%), Gaps = 1/885 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 245 NFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGLLP
Sbjct: 425 APEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG KDA
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGIA
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AIMT
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IRYI
Sbjct: 785 ALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW L ENKTAFT KKDYGKEEREAQWA AQRTLHGLQP E IF +K SYRELS
Sbjct: 845 LSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 905 EIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1536 bits (3977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/885 (85%), Positives = 816/885 (92%), Gaps = 4/885 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME+AAIMAI LANGGG+ PDWQDF+GI+VLL+INSTISFIEENNAGNAAAAL
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MANLAPKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+AAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGLLP
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG KD
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVERPG 787
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IRY
Sbjct: 788 FLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYA 847
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
L+GKAWD ++ KTAFTTKKDYGK EREAQWA AQRTLHGL PPE +F+D + ELS
Sbjct: 848 LTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE--AMFNDNKN--ELS 903
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 904 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/885 (84%), Positives = 817/885 (92%), Gaps = 3/885 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAI LANGGGR PDWQDFVGI LL+INSTISFIEENNAGNAAAAL
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL+AR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VGLLP
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++KD
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+ +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKKADIGIA
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
V DATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A++T
Sbjct: 667 LIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 727 VVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF RY
Sbjct: 787 LLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYT 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW+ ++EN+TAFTTKKDYG+ EREAQWA AQRTLHGL+PPE+ +F D +Y ELS
Sbjct: 847 LSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYTELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDID + QHYTV
Sbjct: 905 EIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1519 bits (3932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/885 (84%), Positives = 816/885 (92%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AAIMAIALANGGGR PDWQDFVGI VLL+INSTISFIEENNAGNAAAAL
Sbjct: 70 MWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNAAAAL 129
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLKIDQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTAIG
Sbjct: 190 SLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K+ +++ AAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++GNWHR SKG
Sbjct: 370 ASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG PWQ +GLLP
Sbjct: 430 APEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKD
Sbjct: 490 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPALK+ADIGIA
Sbjct: 550 SIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIA 609
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML+A
Sbjct: 610 VADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+YLA+MT
Sbjct: 670 LIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYLAVMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSRSWS++ERPG
Sbjct: 730 VVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLDILKF IRY
Sbjct: 790 FWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYS 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSG+AWD ++ENKTAFT+KKDYGK EREAQWA AQRTLHGLQP +T+ +F+DK++YRELS
Sbjct: 850 LSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELS 909
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDI+ IQQHYT+
Sbjct: 910 EIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1516 bits (3926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/885 (84%), Positives = 813/885 (91%), Gaps = 1/885 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGI+ LLVINSTISF+EENNAGNAAAAL
Sbjct: 66 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAAL 125
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 126 MAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 185
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 186 SLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 245
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+L
Sbjct: 246 NFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKL 305
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L AAR
Sbjct: 306 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAAR 365
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR SKG
Sbjct: 366 ASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKG 425
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ VG+LP
Sbjct: 426 APEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLP 485
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+ KD
Sbjct: 486 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDE 545
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 546 AMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 605
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 606 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 665
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+AIMT
Sbjct: 666 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIMT 725
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF ERPG
Sbjct: 726 VVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERPG 785
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF IRYI
Sbjct: 786 YFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYI 845
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
L+G AW +++N+TAFTTK++YG EEREAQWA AQRTLHGLQ ET + ++ YRELS
Sbjct: 846 LAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYRELS 905
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 906 EIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-AGHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | ||||||
| 6759597 | 954 | plasma membrane H+ ATPase [Prunus persic | 1.0 | 0.927 | 0.926 | 0.0 | |
| 224121346 | 955 | autoinhibited H+ ATPase [Populus trichoc | 1.0 | 0.926 | 0.925 | 0.0 | |
| 392055980 | 954 | plasma membrane H+-ATPase [Malus xiaojin | 1.0 | 0.927 | 0.924 | 0.0 | |
| 356563778 | 951 | PREDICTED: ATPase 5, plasma membrane-typ | 1.0 | 0.930 | 0.924 | 0.0 | |
| 356552575 | 951 | PREDICTED: plasma membrane ATPase 4-like | 1.0 | 0.930 | 0.924 | 0.0 | |
| 449442218 | 1038 | PREDICTED: plasma membrane ATPase 4-like | 1.0 | 0.852 | 0.914 | 0.0 | |
| 356515529 | 951 | PREDICTED: plasma membrane ATPase 4 isof | 1.0 | 0.930 | 0.915 | 0.0 | |
| 356507817 | 951 | PREDICTED: plasma membrane ATPase 4-like | 1.0 | 0.930 | 0.914 | 0.0 | |
| 449499538 | 955 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 1.0 | 0.926 | 0.912 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 1.0 | 0.927 | 0.901 | 0.0 |
| >gi|6759597|emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1664 bits (4308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/885 (92%), Positives = 858/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEENNAGNAAAAL
Sbjct: 70 MWNPLSWVMEAAAVMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEENNAGNAAAAL 129
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRW+EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGRWTEQEASILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 190 SLPVTKNPSEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAVGILIELIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEKEHV+LLAAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEHVMLLAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEAR G+REVHFLPFNPVDKRTALTYIDSDGNWHRASKG
Sbjct: 370 ASRTENQDAIDAAIVGMLADPKEARVGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQILALCNC+ED +K+VHAVIDKFAERGLRSL VARQ++PEKTKESPG PWQ VGLLP
Sbjct: 430 APEQILALCNCKEDFKKRVHAVIDKFAERGLRSLAVARQQVPEKTKESPGTPWQFVGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKDA
Sbjct: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDA 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 550 SIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 610 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+VLG Y+A+MT
Sbjct: 670 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIVLGGYMALMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWLM+ T FFS+ F VR L RP++MMAALYLQVSI+SQALIFVTRSRSWSF+ERPG
Sbjct: 730 VVFFWLMKDTKFFSNTFNVRHLGDRPEQMMAALYLQVSIVSQALIFVTRSRSWSFVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF++AQLVAT IAVYANW+FARIEGCGWGWAGVIWL+S+VTYFPLD+LKF IRYI
Sbjct: 790 LLLLGAFMVAQLVATLIAVYANWAFARIEGCGWGWAGVIWLFSVVTYFPLDLLKFAIRYI 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETN +FS+KNSYRELS
Sbjct: 850 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNNLFSEKNSYRELS 909
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 910 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121346|ref|XP_002330804.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222872606|gb|EEF09737.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1655 bits (4286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/886 (92%), Positives = 858/886 (96%), Gaps = 1/886 (0%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAIALANG GR PDWQDFVGI+VLLVINSTISFIEENNAGNAAAAL
Sbjct: 70 MWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIVVLLVINSTISFIEENNAGNAAAAL 129
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRWSEQDASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 190 SLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+AE+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAVGIIAELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD +LIEVFAKGVEKEHV+LLAAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLIEVFAKGVEKEHVMLLAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHRASKG
Sbjct: 370 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDV+KKVH+VIDKFAERGLRSLGVA+QE+PEK+K++ GAPWQLVGLLP
Sbjct: 430 APEQILTLCNCKEDVKKKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAAGAPWQLVGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKDA
Sbjct: 490 LFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDA 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 610 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF+TG+VLG Y+A+MT
Sbjct: 670 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFSTGIVLGGYMALMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW+M+ TDFFSD FGVRSLR +EMMAALYLQVSI+SQALIFVTRSRSWSF+ERPG
Sbjct: 730 VLFFWIMKDTDFFSDKFGVRSLRNNDEEMMAALYLQVSIVSQALIFVTRSRSWSFVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AFV AQLVAT IAVYANW FARIEGCGWGWAGVIWL+S+VTY PLDILKF IRYI
Sbjct: 790 FLLLGAFVAAQLVATLIAVYANWGFARIEGCGWGWAGVIWLFSVVTYVPLDILKFAIRYI 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET-NGIFSDKNSYREL 839
LSGKAWD LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET + +FS+KNSYREL
Sbjct: 850 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETSHNMFSEKNSYREL 909
Query: 840 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
SEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 910 SEIAEQAKRRAEMARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 955
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|392055980|gb|AFM52333.1| plasma membrane H+-ATPase [Malus xiaojinensis] | Back alignment and taxonomy information |
|---|
Score = 1651 bits (4276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/885 (92%), Positives = 854/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEENNAGNAAAAL
Sbjct: 70 MWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEENNAGNAAAAL 129
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRW+EQDASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGRWTEQDASILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAIG
Sbjct: 190 SLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ EII+MYP+Q RKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAVGILIEIIVMYPIQKRKYRQGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEKEHV+LLAAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEHVMLLAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHRASKG
Sbjct: 370 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+ED +KKVH VIDKFAERGLRSLGVARQ++PEKTKESPG PWQ VGLLP
Sbjct: 430 APEQILTLCNCKEDFKKKVHGVIDKFAERGLRSLGVARQQVPEKTKESPGTPWQFVGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KDA
Sbjct: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDA 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+IA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 550 AIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 610 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+VLG YLA+MT
Sbjct: 670 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIVLGGYLALMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWLM TDFFS+ F VRSLR RP++MMAALYLQVSI+SQALIFVTRSRSWSF+ERPG
Sbjct: 730 VVFFWLMNDTDFFSEKFHVRSLRDRPEQMMAALYLQVSIVSQALIFVTRSRSWSFVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYS+VTY PLD LKF IRYI
Sbjct: 790 LLLLGAFMIAQLVATLIAVYANWGFARIKGAGWGWAGVIWLYSIVTYVPLDFLKFAIRYI 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
SGKAW+ LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+++NSYRELS
Sbjct: 850 QSGKAWNNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNERNSYRELS 909
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLREL TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 910 EIAEQAKRRAEVARLRELTTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Malus xiaojinensis Species: Malus xiaojinensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563778|ref|XP_003550136.1| PREDICTED: ATPase 5, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1650 bits (4273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/885 (92%), Positives = 856/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEENNAGNAAAAL
Sbjct: 67 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAAL 126
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL +DQSALTGE
Sbjct: 127 MAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGE 186
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 187 SLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGIV E+I+MYP+QHR+YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 247 NFCICSIAVGIVIELIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 306
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEKE+VILLAAR
Sbjct: 307 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEYVILLAAR 366
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEAR+G+REVHFLPFNPVDKRTALTYIDSDGNWHRASKG
Sbjct: 367 ASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 426
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG PWQ VGLLP
Sbjct: 427 APEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGGPWQFVGLLP 486
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKDA
Sbjct: 487 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDA 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 547 SISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 606
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ IA
Sbjct: 607 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVVLGSY+A+MT
Sbjct: 667 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW M+ T+FFS+ FGVR L PD+MMAALYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 727 VVFFWAMKDTNFFSNKFGVRPLSDSPDKMMAALYLQVSIISQALIFVTRSRSWSFVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF IAQLVATFIAVYANWSFARI+G GWGWAGVIWLYS+VTY PLD+LKF IRYI
Sbjct: 787 LLLLGAFFIAQLVATFIAVYANWSFARIKGMGWGWAGVIWLYSVVTYIPLDLLKFAIRYI 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+DKNSYRELS
Sbjct: 847 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDKNSYRELS 906
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 907 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552575|ref|XP_003544641.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1649 bits (4271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/885 (92%), Positives = 855/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEENNAGNAAAAL
Sbjct: 67 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAAL 126
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL +DQSALTGE
Sbjct: 127 MAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGE 186
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 187 SLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI E+I+MYP+QHR+YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 247 NFCICSIAVGIAIELIVMYPIQHRRYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 306
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEKE+VILLAAR
Sbjct: 307 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEYVILLAAR 366
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEAR+GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG
Sbjct: 367 ASRTENQDAIDAAIVGMLADPKEARSGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 426
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG PWQ VGLLP
Sbjct: 427 APEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGGPWQFVGLLP 486
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKDA
Sbjct: 487 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDA 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 547 SISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 606
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ IA
Sbjct: 607 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVVLGSY+A+MT
Sbjct: 667 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW M+ T+FFS+ FGVR LR PDEMMAALYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 727 VVFFWAMKDTNFFSNKFGVRPLRDSPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF IAQLVATFIAVYANW FARI+G GWGWAGVIWLYS+VTY PLD+LKF IRYI
Sbjct: 787 LLLLGAFFIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSVVTYIPLDLLKFAIRYI 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAWD LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+ +F+DKNSYRELS
Sbjct: 847 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDKNSYRELS 906
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 907 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442218|ref|XP_004138879.1| PREDICTED: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1645 bits (4260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 809/885 (91%), Positives = 846/885 (95%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEENNAGNAAAAL
Sbjct: 154 MWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAAL 213
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 214 MAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 273
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 274 SLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 333
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 334 NFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 393
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVEKE+VILLAAR
Sbjct: 394 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVEKEYVILLAAR 453
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS+G WHR SKG
Sbjct: 454 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGTWHRVSKG 513
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EKTK+SPG PWQLVGLLP
Sbjct: 514 APEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKTKDSPGGPWQLVGLLP 573
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSSLLGQDKD
Sbjct: 574 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDE 633
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 634 SIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 693
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 694 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 753
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF TG+VLG YLA+MT
Sbjct: 754 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGIVLGGYLALMT 813
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW ++ T+FFS+ F V+SL+ P+E+MAALYLQVSIISQALIFVTRSRSWS++ERPG
Sbjct: 814 VLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRSRSWSYMERPG 873
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYSLVTY PLDILKFGIRY
Sbjct: 874 LLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFGIRYA 933
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
SGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE + +F +K+SYRELS
Sbjct: 934 HSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLFPEKSSYRELS 993
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 994 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1038
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356515529|ref|XP_003526452.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1644 bits (4256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 810/885 (91%), Positives = 851/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LL INSTISFIEENNAGNAAAAL
Sbjct: 67 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAAL 126
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDI+PADARLLEGD L +DQSALTGE
Sbjct: 127 MAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGE 186
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP +EVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 187 SLPVTKNPSEEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ E+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 247 NFCICSIAVGIIIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 306
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVFAKGVEK++VILLAAR
Sbjct: 307 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDYVILLAAR 366
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR+SKG
Sbjct: 367 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRSSKG 426
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDVRK+VH IDKFAERGLRSLGVARQE+PEK K+SPGAPWQ VGLLP
Sbjct: 427 APEQILNLCNCKEDVRKRVHGTIDKFAERGLRSLGVARQEVPEKNKDSPGAPWQFVGLLP 486
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETI RALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSSLLGQ KDA
Sbjct: 487 LFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDA 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+++A+PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 547 AVSAVPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 606
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 607 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVVLG+Y+A+MT
Sbjct: 667 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLREIFATGVVLGAYMALMT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWLM+ TDFFSD FGVRS+R P EMMAALYLQVSIISQALIFVTRSRSWS++ERPG
Sbjct: 727 VVFFWLMKDTDFFSDKFGVRSIRNSPGEMMAALYLQVSIISQALIFVTRSRSWSYVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL +AF+IAQLVATF+AVYANW FARI+G GWGWAGVIWLYSLVTY PLDILKF IRY+
Sbjct: 787 LLLLSAFMIAQLVATFLAVYANWGFARIQGMGWGWAGVIWLYSLVTYIPLDILKFAIRYV 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAWD LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET +F+DKNSYRELS
Sbjct: 847 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETTNLFNDKNSYRELS 906
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 907 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356507817|ref|XP_003522660.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1643 bits (4255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 809/885 (91%), Positives = 851/885 (96%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LL INSTISFIEENNAGNAAAAL
Sbjct: 67 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAAL 126
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDI+PADARLLEGD L +DQSALTGE
Sbjct: 127 MAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGE 186
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP +EVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 187 SLPVTKNPSEEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 246
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ E+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 247 NFCICSIAVGIIIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 306
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVFAKGVEK++VILLAAR
Sbjct: 307 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDYVILLAAR 366
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR+SKG
Sbjct: 367 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRSSKG 426
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDVRK+VH IDKFAERGLRSLGVARQE+PEK K+SPGAPWQ VGLLP
Sbjct: 427 APEQILNLCNCKEDVRKRVHGTIDKFAERGLRSLGVARQEVPEKNKDSPGAPWQFVGLLP 486
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETI RALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSSLLGQ KDA
Sbjct: 487 LFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDA 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
+++A+PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 547 AVSAVPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 606
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 607 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATG+VLGSY+A+MT
Sbjct: 667 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLREIFATGIVLGSYMALMT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW+M+ TDFFSD FGVRS+R P EMMAALYLQVSIISQALIFVTRSRSWS++ERPG
Sbjct: 727 VVFFWIMKDTDFFSDKFGVRSIRNSPGEMMAALYLQVSIISQALIFVTRSRSWSYVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL +AF+IAQLVATF+AVYANW FARI+G GWGWAGVIWLYSLVTY PLDILKF IRY+
Sbjct: 787 LLLLSAFMIAQLVATFLAVYANWGFARIQGMGWGWAGVIWLYSLVTYIPLDILKFAIRYV 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAWD LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET +F+DKNSYRELS
Sbjct: 847 LSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETTNLFNDKNSYRELS 906
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 907 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499538|ref|XP_004160843.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1643 bits (4255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/885 (91%), Positives = 845/885 (95%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEENNAGNAAAAL
Sbjct: 71 MWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAAL 130
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 131 MAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 190
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 191 SLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 250
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 251 NFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 310
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVEKE+VILLAAR
Sbjct: 311 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVEKEYVILLAAR 370
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS+G WHR SKG
Sbjct: 371 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGTWHRVSKG 430
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EK K+SPG PWQLVGLLP
Sbjct: 431 APEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKXKDSPGGPWQLVGLLP 490
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSSLLGQDKD
Sbjct: 491 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDE 550
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 551 SIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 610
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 611 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 670
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF TG+VLG YLA+MT
Sbjct: 671 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGIVLGGYLALMT 730
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW ++ T+FFS+ F V+SL+ P+E+MAALYLQVSIISQALIFVTRSRSWS++ERPG
Sbjct: 731 VLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRSRSWSYMERPG 790
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYSLVTY PLDILKFGIRY
Sbjct: 791 LLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFGIRYA 850
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
SGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPE + +F +K+SYRELS
Sbjct: 851 HSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLFPEKSSYRELS 910
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 911 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 955
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1640 bits (4247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/885 (90%), Positives = 846/885 (95%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEENNAGNAAAAL
Sbjct: 70 MWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAAL 129
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 190 SLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KEHV+LLAAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEHVLLLAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+DG WHRASKG
Sbjct: 370 ASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGKWHRASKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+PWQ VGLLP
Sbjct: 430 APEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPWQFVGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLGQDKDA
Sbjct: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDA 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
SIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 550 SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 609
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ IA
Sbjct: 610 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVVLG YLA+MT
Sbjct: 670 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGGYLALMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSRSWSF+ERPG
Sbjct: 730 VIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSWSFVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL TAF+IAQLVAT IAVYANW FARI+G GWGWAGV+W+YS+V Y PLD +KF IRYI
Sbjct: 790 LLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFIKFFIRYI 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW LLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET+ +F+DKNSYRELS
Sbjct: 850 LSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFNDKNSYRELS 909
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 910 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | ||||||
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 1.0 | 0.932 | 0.822 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 1.0 | 0.932 | 0.809 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 1.0 | 0.927 | 0.783 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.995 | 0.929 | 0.790 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.998 | 0.931 | 0.787 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.996 | 0.929 | 0.785 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.998 | 0.924 | 0.779 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.998 | 0.920 | 0.772 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.988 | 0.923 | 0.690 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.994 | 0.915 | 0.676 | 0.0 |
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3787 (1338.1 bits), Expect = 0., P = 0.
Identities = 728/885 (82%), Positives = 781/885 (88%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGGR PDWQDFVGI+ LL+INSTISFIEE
Sbjct: 65 MWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAAL 124
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTGE
Sbjct: 125 MAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
S+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+IG
Sbjct: 185 SIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHRL
Sbjct: 245 NFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAAR
Sbjct: 305 FQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAAR 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASKG
Sbjct: 365 ASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLLP
Sbjct: 425 APEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD+
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDS 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKK
Sbjct: 545 SLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIA 604
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM IA
Sbjct: 605 VVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+MT
Sbjct: 665 LIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E PG
Sbjct: 725 VVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY+
Sbjct: 785 LLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYV 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW LLENKTAFTTKKDYGK TLHGLQP E N IF++KNSY ELS
Sbjct: 845 LSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 905 QIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3713 (1312.1 bits), Expect = 0., P = 0.
Identities = 716/885 (80%), Positives = 769/885 (86%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NG R PDWQDFVGII LLVINSTISFIEE
Sbjct: 65 MWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+IG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 245 NFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLLP
Sbjct: 425 APEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD+
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDS 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
+IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKK
Sbjct: 545 NIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM+
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIMS 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRYI
Sbjct: 785 ALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYI 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW +L +N+TAFTTKKDYG TLHGLQP E IF +K SYRELS
Sbjct: 845 LSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYRELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDIDT HYTV
Sbjct: 905 EIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3640 (1286.4 bits), Expect = 0., P = 0.
Identities = 693/885 (78%), Positives = 763/885 (86%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGGR PDWQDFVGI VLL+INSTISFIEE
Sbjct: 70 MWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNAAAAL 129
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLKIDQSALTGE
Sbjct: 130 MAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSALTGE 189
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTAIG
Sbjct: 190 SLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIG 249
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 250 NFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K+ +++ AAR
Sbjct: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAAR 369
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++GNWHR SKG
Sbjct: 370 ASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKG 429
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG PWQ +GLLP
Sbjct: 430 APEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLP 489
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQDKD
Sbjct: 490 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 549
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPALK+
Sbjct: 550 SIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIA 609
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML+A
Sbjct: 610 VADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLA 669
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+YLA+MT
Sbjct: 670 LIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYLAVMT 729
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSRSWS++ERPG
Sbjct: 730 VVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPG 789
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLDILKF IRY
Sbjct: 790 FWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYS 849
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
LSG+AWD ++ENKTAFT+KKDYGK TLHGLQP +T+ +F+DK++YRELS
Sbjct: 850 LSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELS 909
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDI+ IQQHYT+
Sbjct: 910 EIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3637 (1285.3 bits), Expect = 0., P = 0.
Identities = 700/885 (79%), Positives = 762/885 (86%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGG+ PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+AAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGLLP
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG KD
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVERPG 787
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IRY
Sbjct: 788 FLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYA 847
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
L+GKAWD ++ KTAFTTKKDYGK TLHGL PPE +F+D + ELS
Sbjct: 848 LTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--ELS 903
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 904 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3624 (1280.8 bits), Expect = 0., P = 0.
Identities = 697/885 (78%), Positives = 759/885 (85%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGG+ PDWQDFVGI+ LLVINSTISF+EE
Sbjct: 66 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAAL 125
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 126 MAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 185
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 186 SLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 245
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+L
Sbjct: 246 NFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKL 305
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L AAR
Sbjct: 306 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAAR 365
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR SKG
Sbjct: 366 ASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKG 425
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ VG+LP
Sbjct: 426 APEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLP 485
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+ KD
Sbjct: 486 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDE 545
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 546 AMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 605
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 606 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 665
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+AIMT
Sbjct: 666 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIMT 725
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF ERPG
Sbjct: 726 VVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERPG 785
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF IRYI
Sbjct: 786 YFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYI 845
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
L+G AW +++N+TAFTTK++YG TLHGLQ ET + ++ YRELS
Sbjct: 846 LAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYRELS 905
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 906 EIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 949
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3621 (1279.7 bits), Expect = 0., P = 0.
Identities = 695/885 (78%), Positives = 764/885 (86%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGGR PDWQDFVGI LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL+AR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VGLLP
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++KD
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
+ +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKK
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 666
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A++T
Sbjct: 667 LIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVT 726
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
VVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 727 VVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVERPG 786
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF RY
Sbjct: 787 LLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYT 846
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
LSGKAW+ ++EN+TAFTTKKDYG+ TLHGL+PPE+ +F D +Y ELS
Sbjct: 847 LSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYTELS 904
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDID + QHYTV
Sbjct: 905 EIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3575 (1263.5 bits), Expect = 0., P = 0.
Identities = 693/889 (77%), Positives = 758/889 (85%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL 128
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQS+LTGE
Sbjct: 129 MARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSSLTGE 188
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK P D V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQ+VLTAIG
Sbjct: 189 SLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIG 248
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 249 NFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AA+
Sbjct: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQ 368
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP DKRTALTYIDSDG HR SKG
Sbjct: 369 ASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKG 428
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L + R ++ ++VHAVIDKFAERGLRSL VA QE+PE TKES G PWQ +GL+P
Sbjct: 429 APEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMP 488
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDE 548
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
SI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 549 SIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+MT
Sbjct: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMT 728
Query: 661 VVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTRSRSWSFI 716
V+FFW KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTRSRSWS++
Sbjct: 729 VIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYV 788
Query: 717 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 776
ERPG+LL AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY++V Y PLDI+KF
Sbjct: 789 ERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFL 848
Query: 777 IRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSY 836
IRY LSG+AWD ++E + AFT +KD+GK TLHGLQ P+ +F ++ +
Sbjct: 849 IRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK-MFPERTHF 907
Query: 837 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
ELS++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct: 908 NELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3552 (1255.4 bits), Expect = 0., P = 0.
Identities = 687/889 (77%), Positives = 760/889 (85%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 73 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL 132
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTGE
Sbjct: 133 MARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 192
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+ D V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAIG
Sbjct: 193 SLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAIG 252
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 253 NFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 312
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AAR
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAAR 372
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAAIVGMLADPK+ARAG++EVHFLPFNP DKRTALTYID++GN HR SKG
Sbjct: 373 ASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKG 432
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L + + ++ ++VHAVIDKFAERGLRSL VA Q++PE K+S G PWQ VGL+P
Sbjct: 433 APEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMP 492
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 493 LFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDE 552
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
SI ALPVDELIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 553 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 612
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 613 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 672
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+MT
Sbjct: 673 LIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMT 732
Query: 661 VVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTRSRSWSFI 716
V+FFW+ KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTRSRSWSF+
Sbjct: 733 VIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFV 792
Query: 717 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 776
ERPG+ L AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY+++ Y PLD +KF
Sbjct: 793 ERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFF 852
Query: 777 IRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSY 836
IRY LSG+AWD ++E + AFT +KD+GK TLHGLQ P+T +F+D+
Sbjct: 853 IRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK-MFTDRTHV 911
Query: 837 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
EL+++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct: 912 SELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3121 (1103.7 bits), Expect = 0., P = 0.
Identities = 611/885 (69%), Positives = 702/885 (79%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
KT+VLRDG+W EQDASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK ++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVG+V EIIIM+PVQHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF ++K+ ++LLA R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAAIV MLADP+EARA +RE+HFLPFNPVDKRTA+TYIDSDG W+RA+KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQ+L LC + ++ ++V+A+ID+FAE+GLRSL VA QEIPEK+ SPG PW+ GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
A+PVDELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW++DF PFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IFATG+V+G+YLA++T
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+F+W++ T FF F V+S+ +++ +A+YLQVSIISQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AF++AQL AT IAVYAN SFA+I G GW WAGVIWLYSL+ Y PLD++KF Y
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETNGIFSDKNSYRELS 840
LSG+AW+ +L+ KTAFT KKDYGK + E G S S
Sbjct: 852 LSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSA---EELRG------SRSRAS 902
Query: 841 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
IAEQ +RRAE+ARL E+H++ H+ESV+KLK +D I+ +TV
Sbjct: 903 WIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3121 (1103.7 bits), Expect = 0., P = 0.
Identities = 608/899 (67%), Positives = 712/899 (79%)
Query: 1 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 60
MWNPLSWVME +GGG+ D+ DFVGI+VLL+INSTISF+EE
Sbjct: 68 MWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAAAL 127
Query: 61 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
PK K +RDG+W+E DA+ LVPGD++SIKLGDI+PADARLLEGDPLKIDQ+ LTGE
Sbjct: 128 MAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLTGE 187
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTKNP V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTAIG
Sbjct: 188 SLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTAIG 247
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIAVG+ EI+++Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+HRL
Sbjct: 248 NFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHRL 307
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVF +G++++ +L+AAR
Sbjct: 308 AQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMAAR 367
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
A+R ENQDAID AIV ML+DPKEARAG++E+HFLPF+P ++RTALTY+D +G HR SKG
Sbjct: 368 AARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVSKG 427
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APE+IL + + + ++++KVHA IDKFAERGLRSLG+A QE+P+ + G PW V LLP
Sbjct: 428 APEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVALLP 487
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSLL +
Sbjct: 488 LFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTE 547
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 540
++ VDELIE ADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 GVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIA 604
Query: 541 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML+
Sbjct: 605 VDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLC 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
+ W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATGVVLG+YLAIMT
Sbjct: 665 VFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAIMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRP-------------DEMMAALYLQVSIISQALIFV 707
VVFFW +T+FF + F VR+ ++M +A+YLQVS ISQALIFV
Sbjct: 725 VVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALIFV 784
Query: 708 TRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTY 767
TRSRSWSF+ERPG LL AF+IAQLVA+ I+ ANW FA I GWGW GVIW++++VTY
Sbjct: 785 TRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIVTY 844
Query: 768 FPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKXXXXXXXXXXXXTLHGLQPPETN 827
LD +KF +RY LSGK+WD ++E +TA T KK++G+ T HGL+ +
Sbjct: 845 MLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ-K 903
Query: 828 GIFSDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI-DTIQQHYTV 885
++ ++NS EL+ +AE+AKRRAE+AR+REL TLKG VES KLKG D+ D +YT+
Sbjct: 904 PVY-ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8700 | 0.9988 | 0.9324 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3754 | 0.8406 | 0.8275 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8391 | 0.9988 | 0.9246 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3800 | 0.8564 | 0.8004 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8813 | 1.0 | 0.9296 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4180 | 0.8158 | 0.8968 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7367 | 0.9887 | 0.9239 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8413 | 0.9988 | 0.9237 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8380 | 0.9988 | 0.9246 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8692 | 1.0 | 0.9305 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8429 | 1.0 | 0.9276 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8451 | 0.9966 | 0.9293 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8813 | 1.0 | 0.9325 | yes | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3729 | 0.8429 | 0.8117 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8402 | 0.9988 | 0.9246 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7296 | 0.9943 | 0.9157 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8508 | 0.9954 | 0.9293 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8323 | 0.9988 | 0.9208 | no | no |
| P54679 | PMA1_DICDI | 3, ., 6, ., 3, ., 6 | 0.5049 | 0.8542 | 0.7145 | yes | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8951 | 1.0 | 0.9305 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8485 | 0.9988 | 0.9315 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8677 | 1.0 | 0.9325 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8198 | 0.7909 | 0.9943 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 885 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-169 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-113 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-84 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-79 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-74 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-69 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-63 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-60 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 9e-58 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-55 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-53 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-52 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 6e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 7e-35 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-33 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-28 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-28 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-26 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-26 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-18 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.003 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.004 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1143 bits (2958), Expect = 0.0
Identities = 432/742 (58%), Positives = 535/742 (72%), Gaps = 23/742 (3%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
WNPLSWVMEAAAI+AIAL N W DFV I+ LL++N+TI FIEEN AGNA AL
Sbjct: 34 FWNPLSWVMEAAAIIAIALEN-------WVDFVIILGLLLLNATIGFIEENKAGNAVEAL 86
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
+LAPK +VLRDG+W E AS LVPGDV+ +K+GDIVPAD RL EGD +++DQ+ALTGE
Sbjct: 87 KQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGE 146
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAI 179
SLPVTK D +SGST KQGE EAVV ATG++TFFGKAA LV ST GH QK+L+ I
Sbjct: 147 SLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKI 206
Query: 180 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 239
G F I I V ++ E+++++ + +R+G+ LVLL+GGIPIAMP VLSVTMA+G+
Sbjct: 207 GLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAE 266
Query: 240 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 299
L+++ AI R+TAIEE+AGMD+LCSDKTGTLTLNKL++D L F G +K+ V+L AA
Sbjct: 267 LAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAA 324
Query: 300 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRAS 358
ASR E+QDAID A++G D KEAR G + + F+PF+PVDKRT T D + G + +
Sbjct: 325 LASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVT 384
Query: 359 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 418
KGAP+ IL LC+ ++++ +KV +D+ A RG R+LGVAR W +GL
Sbjct: 385 KGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVART--------DEEGRWHFLGL 436
Query: 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 478
LPLFDPPRHD+ ETI RA +LGV VKM+TGD LAI KET RRLG+GTN+Y + LL D
Sbjct: 437 LPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN 496
Query: 479 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538
+ + E++E ADGFA VFPEHKYEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+G
Sbjct: 497 RDDLP-SGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG 555
Query: 539 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 598
IAVA ATDAARSA+DIVLTEPGLSVI+ A+L SR IFQRMK+Y IY ++ TIRIV F L
Sbjct: 556 IAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGL 615
Query: 599 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 658
+ LI F F P MV+IIAILNDGTIMTI+ D VKPS P W L+E+F VLG YL I
Sbjct: 616 LILILNFYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVI 675
Query: 659 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 718
T + + T FF D FG++ L + + +YLQVSI A IFVTR+ + + ER
Sbjct: 676 STFLLLAIALDTTFFIDKFGLQLL---HGNLQSFIYLQVSISGHATIFVTRTHGFFWSER 732
Query: 719 PGLLLATAFVIAQLVATFIAVY 740
PG LL AFVIAQ++ATFIAVY
Sbjct: 733 PGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 515 bits (1328), Expect = e-169
Identities = 243/858 (28%), Positives = 388/858 (45%), Gaps = 100/858 (11%)
Query: 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM 61
+P ++ AA+++ + G D + I++++VIN+ + F++E A A AL
Sbjct: 79 KDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALK 135
Query: 62 ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGES 121
+PK KVLRDG++ E AS LVPGD++ ++ GD+VPAD RLLE L++D+SALTGES
Sbjct: 136 KMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGES 195
Query: 122 LPVTKNPYDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 167
LPV K +FSG+T G + +V+ATG T FGK A L+ +
Sbjct: 196 LPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKK 255
Query: 168 QV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL------LVLLIGG 220
+V Q+ L +G F + ++A ++ +R G L L L +
Sbjct: 256 EVKTPLQRKLNKLGKF------LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAA 309
Query: 221 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV--- 277
+P +P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV
Sbjct: 310 VPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKI 369
Query: 278 -------DRNLIEVFAKGVEKEHVILLAARASRTENQ-------DAIDAAIV------GM 317
D + ++ ++ A S T + D + A+V G
Sbjct: 370 YINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGF 429
Query: 318 LADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC-------N 370
D + +PF+ KR ++ +G + KGAPE IL C
Sbjct: 430 SLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEP 489
Query: 371 CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ----LVGLLPLFDPPR 426
E+ + + + + A GLR L VA +++ K+ + +GL + DPPR
Sbjct: 490 LTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPR 549
Query: 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP 486
D E I G+ V MITGD + + G+ + + G + + AL
Sbjct: 550 EDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALS 605
Query: 487 VDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 543
+EL +E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+
Sbjct: 606 DEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665
Query: 544 -ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI 602
TDAA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL +LI +
Sbjct: 666 EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL-TLLIYSL 724
Query: 603 WKFDFSPF---MVLIIAILNDGTI---MTISK------DRVKPSPQPDSWKLKEIFATGV 650
+ F P +L I +L D + + R P+ + K + +
Sbjct: 725 FNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFIL 784
Query: 651 VLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRS 710
++G AI+ ++ F L L + + + +I L RS
Sbjct: 785 IIGLLSAILFILTFLLYL----LGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRS 840
Query: 711 RSWSFIER-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSL 764
R F+ L LA +I QL+ F+ F + WL ++
Sbjct: 841 RGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ-----PTPLSLFEWLIAI 895
Query: 765 VTYFPLDILKFGIRYILS 782
L + Y L
Sbjct: 896 AVALLLLYIVVSELYKLK 913
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-113
Identities = 186/588 (31%), Positives = 285/588 (48%), Gaps = 78/588 (13%)
Query: 35 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTK--VLRDGRWSEQDASILVPGDVISI 92
I+ L+++ + ++ A + +L L VLR+G W E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 93 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGE 142
K G+ VPAD LL G +D+S LTGES PV K D VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 143 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV 201
+ VV TG+ T G+ A +V + Q + NF I + + ++A + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 202 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 257
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 258 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGM 317
+D LCSDKTGTLT NK+T+ I G E L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 318 LADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRED 374
+A G +E + PF+ V KR ++ DG+ KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 375 VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIR 434
+ A +GLR L A +E+ + + +GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 435 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 495 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 554
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 555 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI 602
VL + LS I+ AV R IF +K+ +A++ + ++ +L+ +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 4e-84
Identities = 206/740 (27%), Positives = 347/740 (46%), Gaps = 101/740 (13%)
Query: 3 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 62
NPL ++ A+A++++ + N D V I + ++I T+ F++E + + AL
Sbjct: 61 NPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK 113
Query: 63 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 122
+ P+ ++R+G+ AS LVPGD++ + +GD VPAD R++E L ID+S LTGE+
Sbjct: 114 LVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETT 173
Query: 123 PVTK-------NPYDEV-------FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 168
PV+K ++ F G+ + G + +V+ TG +T FG ++ + +
Sbjct: 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233
Query: 169 VGH-FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 227
QK + +G + ++ G++ I ++ Q + + + + L + IP +P
Sbjct: 234 PKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPI 292
Query: 228 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV------DRNL 281
+++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV D
Sbjct: 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352
Query: 282 IEVFAKGVEK-EHVILLAARASRTENQD--------------------------AIDAAI 314
+ A + + VI+ D A+
Sbjct: 353 TMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVAL 412
Query: 315 VGMLA-----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS-KGAPEQILAL 368
+ +L D +E V EV PF+ K A+ + KGA EQ+L
Sbjct: 413 IELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKY 469
Query: 369 CN-----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 417
C + R + + A GLR + A PEK + + +G
Sbjct: 470 CTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLG 521
Query: 418 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 477
L+ + DPPR E + + GV + MITGD RRLGM S S+ G+
Sbjct: 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEK 579
Query: 478 KDA-SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 536
DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK AD
Sbjct: 580 LDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLAD 637
Query: 537 IGIAVAD-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595
IG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L
Sbjct: 638 IGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALS 696
Query: 596 FMLIALIWKFD--FSPFMVLIIAILNDGT------IMTISKDRVKPSPQP--DSWKLKEI 645
+ +A + F + +L I IL DG + + KD ++ P+P D K++
Sbjct: 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDL 756
Query: 646 FATGVVLGSYLAIMTVVFFW 665
+V + + T+ F
Sbjct: 757 IKKILVSAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 1e-79
Identities = 199/689 (28%), Positives = 331/689 (48%), Gaps = 77/689 (11%)
Query: 33 VGIIVLLVINSTI-SFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILV 85
II L+V+ S + FI+E+ A AA AL + VLR +G E LV
Sbjct: 91 TVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALV 150
Query: 86 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTK----------NPYDE---V 132
PGD+I + GDI+PADAR++ L I+QSALTGESLPV K +
Sbjct: 151 PGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLC 210
Query: 133 FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIV 192
F G+ G +AVV+ATG T+FG A F K + ++ I + V +V
Sbjct: 211 FMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLV-MV 269
Query: 193 AEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 252
++++ + + + L + +G P +P ++S +A G+ +S++ I K ++A
Sbjct: 270 PVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSA 329
Query: 253 IEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA--ARASRTENQDAI 310
I+ MD+LC+DKTGTLT +K+ +++++ + G E V+ +A +T ++ +
Sbjct: 330 IQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVL 386
Query: 311 DAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR-ASKGAPEQILA 367
D A++ L + ++ + ++V +PF+ +R ++ +++ R KGA E++L
Sbjct: 387 DHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVV-VENRAEVTRLICKGAVEEMLT 445
Query: 368 LCN----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIP------EKTKESPGA 411
+C E + ++ + + +G+R + VA + + KT E
Sbjct: 446 VCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEE--- 502
Query: 412 PWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 469
QL+ G L DPP+ + E I G+NVK++TGD + + +G+ N +
Sbjct: 503 --QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDF- 559
Query: 470 SSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV 526
LLG D I L +EL + K FA + P K I+ L++ H G GDG+
Sbjct: 560 ---LLGAD----IEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGI 612
Query: 527 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586
NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+ V+ R F + Y
Sbjct: 613 NDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTA 672
Query: 587 SITIRIVLGFMLIALIWKFDFSPFM------VLIIAILNDGTIMTISKDRVKPS--PQPD 638
S V ++ + F PF+ +LI +L D + +T+ D++ +P
Sbjct: 673 SSNFGNVFSVLVASA-----FIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPH 727
Query: 639 SWKLKEIFATGVVLGSYLAIMTVVFFWLM 667
W+ K + + +G +I + F LM
Sbjct: 728 QWEQKGMGRFMLCIGPVSSIFDIATFLLM 756
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (665), Expect = 8e-74
Identities = 187/609 (30%), Positives = 297/609 (48%), Gaps = 93/609 (15%)
Query: 34 GIIVLLVINST-ISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVP 86
G+I L+V ST ++FI+E + AA AL A ++ VLR + W E LVP
Sbjct: 126 GVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVP 185
Query: 87 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTK----------NPYDE---VF 133
GD+I + GD++PAD R+L+ L + Q++LTGESLPV K NP + F
Sbjct: 186 GDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCF 245
Query: 134 SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIV 192
G+ G +AVVIATG +T+FG+ A V ++ FQ+ I ++ ++
Sbjct: 246 MGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQ--------GISRVSWLLI 297
Query: 193 AEIIIMYPVQHRKYRDGIDNLLVLLIGGI--------------------PIAMPTVLSVT 232
+++M PV VLLI G P +P +++ T
Sbjct: 298 RFMLVMAPV-------------VLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTST 344
Query: 233 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 292
+A G+ +LS+Q I KR+ AI+ MD+LC+DKTGTLT +K+ ++ + ++ G E
Sbjct: 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENH-TDIS--GKTSE 401
Query: 293 HVILLAARAS--RTENQDAIDAAIVGMLADPKEARAGV--REVHFLPFNPVDKRTALTYI 348
V+ A S +T ++ +D A++ + + +++ +PF+ +R ++
Sbjct: 402 RVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVA 461
Query: 349 DSDGNWHRASKGAPEQILALCN----------CREDVRKKVHAVIDKFAERGLRSLGVAR 398
++ + KGA E+IL +C+ + + +++ V D +GLR + VA
Sbjct: 462 ENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVAT 521
Query: 399 QEIPEKTKESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 455
+ +P + + A L G + DPP+ +A ++ GV VK++TGD +
Sbjct: 522 KYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAA 581
Query: 456 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRL 512
+ +G+ L+G D I L DEL E+ FA + P HK IV L
Sbjct: 582 KVCHEVGLDAGEV----LIGSD----IETLSDDELANLAERTTLFARLTPMHKERIVTLL 633
Query: 513 QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 572
+ H+ G GDG+NDAPAL+ ADIGI+V A D AR A+DI+L E L V+ V+ R
Sbjct: 634 KREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGR 693
Query: 573 AIFQRMKNY 581
F M Y
Sbjct: 694 RTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 246 bits (631), Expect = 3e-69
Identities = 193/653 (29%), Positives = 296/653 (45%), Gaps = 117/653 (17%)
Query: 3 NPLSWV-MEAAAI---MAIALANGGGRDPDWQDFVGIIVLLV---INSTISFIEENNAGN 55
NP +V M AAI L G + D G+I++L ++ + F +E +
Sbjct: 81 NPFIYVLMVLAAISFFTDYWLPLRRGEETDL---TGVIIILTMVLLSGLLRFWQEFRSNK 137
Query: 56 AAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 109
AA AL A + VLR + E LVPGD++ + GD++PAD RL+E
Sbjct: 138 AAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD 197
Query: 110 LKIDQSALTGESLPVTKNPYDEV-------------------------FSGSTCKQGEIE 144
L I Q+ LTGE+LPV K YD + F G+ G
Sbjct: 198 LFISQAVLTGEALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTAT 255
Query: 145 AVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHR 204
AVV+ATG T+FG A + T F + + S++ ++ +++M PV
Sbjct: 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV--- 304
Query: 205 KYRDGIDNLLVLLIGGI--------------------PIAMPTVLSVTMAIGSHRLSQQG 244
VLLI G P +P ++S +A G+ ++++
Sbjct: 305 ----------VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRK 354
Query: 245 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 304
+ KR+ AI+ MDVLC+DKTGTLT +++ ++ +L G + E V+ LA S
Sbjct: 355 VVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFH 411
Query: 305 EN--QDAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
++ ++ +D A+V AG R+V LPF+ V +R ++ D+ G KG
Sbjct: 412 QSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKG 471
Query: 361 APEQILALCNCRED----------VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP- 409
A E++LA+ D R+++ A+ + + G R L VA +EIP +
Sbjct: 472 AVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQY 531
Query: 410 --GAPWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465
LV G L DPP+ +A I GV VK++TGD + + R +G+
Sbjct: 532 STADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE- 590
Query: 466 NMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMT 522
P LLG + I A+ L +E+ FA + P K ++K LQ H G
Sbjct: 591 ---PGEPLLGTE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFL 643
Query: 523 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 575
GDG+NDAPAL+ AD+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 644 GDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 1e-63
Identities = 166/658 (25%), Positives = 293/658 (44%), Gaps = 77/658 (11%)
Query: 8 VMEAAAIMAIALA------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM 61
++ AA++++ L + W + V I+V +++ ++ + + L
Sbjct: 102 LLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLN 161
Query: 62 -ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
A K V+R G+ + +V GD++S+ GD+VPAD + G L+ID+S++TGE
Sbjct: 162 REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGE 221
Query: 121 SLPVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQ 173
S P+ K P + F SG+ +G +V A GV++F GK + DST
Sbjct: 222 SDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLS 281
Query: 174 KVLTAIGNF-CICSIAVGIVA---EIIIMYPVQHRKYRDGIDNLLVLLIGGIPI---AMP 226
++ IG F ++ + +V + + R + L I + I A+P
Sbjct: 282 ELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVP 341
Query: 227 TV--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLI 282
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N ++V + I
Sbjct: 342 EGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYI 401
Query: 283 EVFAKGVEK------EHV--ILLAARA-------------------SRTENQDAIDAAIV 315
V +HV IL+ + S+TE A+ +
Sbjct: 402 GEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGL 459
Query: 316 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC----NC 371
+L D +E RA + V PFN K ++ S G + KGA E +L C +
Sbjct: 460 LLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDS 519
Query: 372 -------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPL 421
+D + + VI+ A LR++ +A ++ + K+ P L+G++ +
Sbjct: 520 NGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGI 579
Query: 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 481
DP R E ++ G+ V+M+TGD + K R G+ T + + S
Sbjct: 580 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRS 636
Query: 482 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541
+ +D ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 637 LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM 696
Query: 542 ADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 593
+ T+ A+ ASDI+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 697 GISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 5e-63
Identities = 160/607 (26%), Positives = 244/607 (40%), Gaps = 98/607 (16%)
Query: 12 AAIMAIALANGGGRDPDWQDFVGIIVLLVINSTIS-FIEE---NNAGNAAAALMANLAPK 67
A I A A + P + + +++ L + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 68 T--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 125
T V DG E + GD++ ++ G+ +P D ++ G +D+S LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 126 KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 183
K P DEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 184 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 241
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 242 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 301
++G + K A+E +A +D + DKTGTLT K V +V A +++ ++ LAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 302 SRTENQ---DAI-DAAIVGMLADPKEARA----GVREVHFLPFNPVDKRTALTYIDSDGN 353
+ AI AA L D ++ GV VD L
Sbjct: 444 EQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE-------VDGERVL-------- 488
Query: 354 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 413
G L D+ + I+ G + VA
Sbjct: 489 -----VGNAR---LLGEEGIDL-PLLSERIEALESEGKTVVFVAVDG------------- 526
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473
+LVG++ L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG----------- 575
Query: 474 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 533
+DE+ A + PE K EIV+ LQ M GDG+NDAPAL
Sbjct: 576 -------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALA 616
Query: 534 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRI 592
AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N I I
Sbjct: 617 AADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676
Query: 593 VLGFMLI 599
L +
Sbjct: 677 PLAAGGL 683
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 215 bits (551), Expect = 1e-60
Identities = 142/581 (24%), Positives = 237/581 (40%), Gaps = 82/581 (14%)
Query: 37 VLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPGDVISI 92
+LL + +EE G A+ AL + LAP T + DG E L GD++ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 93 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 152
+ G+ +P D ++ G+ +D+SALTGES+PV K DEVF+G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 153 HTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFCICSIAVGIVAEIIIMYPVQHRKYRDGI 210
+ + LV ++ + Q++ I + +A+ ++ ++ + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLT-FVVWLAL---GALGAL 197
Query: 211 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 268
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 269 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGV 328
TLT K TV IE E +L A A + + AIV
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYA 303
Query: 329 REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA----LCNCREDVRKKVHAVID 384
++ D + + G A+ E++ + +++
Sbjct: 304 KKRGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDLLN 357
Query: 385 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV 443
+ +G + VA +L+G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 444 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503
M+TGD + + LG +DE+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 563
K IVK LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 564 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLIALIW 603
+ +A+ SR + +K N + I L + +W
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 9e-58
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 35 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIK 93
I++L++IN+ + +E A A AL L P V+RDG+ E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 94 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVH 153
GD VPAD R++EG L++D+SALTGESLPV K+ D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 154 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 212
T GK A LV+ Q++L + + I + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 213 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 255
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 8e-55
Identities = 173/725 (23%), Positives = 305/725 (42%), Gaps = 144/725 (19%)
Query: 5 LSWVMEAAAIMAIALANGGGRDPDWQD-FVGII--VLLVINSTISFIEENNAGNAAAALM 61
L W+ +A + +P + ++G++ +++I S+ +E + +
Sbjct: 77 LLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESF- 135
Query: 62 ANLAPKTK-VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
N+ P+ V+RDG +A +V GD++ +K GD +PAD R++ K+D S+LTGE
Sbjct: 136 KNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGE 195
Query: 121 SLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN--- 167
S P T+ NP + F + C +G +V+ TG T G+ A L
Sbjct: 196 SEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255
Query: 168 -----QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIP 222
++ HF ++T + F S + +I+ Y + + + L+ +++ +P
Sbjct: 256 TPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVIFLIGIIVANVP 307
Query: 223 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV----- 277
+ ++V + + + R++++ + K + A+E + +CSDKTGTLT N++TV
Sbjct: 308 EGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF 367
Query: 278 DRNLIE----------VFAKGVEK----EHVILLAARASRTENQDAI---------DAAI 314
D + E F K + L RA Q+ + DA+
Sbjct: 368 DNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASE 427
Query: 315 VGML-------ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR---ASKGAPEQ 364
+L E R +V +PFN +K + + D R KGAPE+
Sbjct: 428 SALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPER 487
Query: 365 ILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK---------T 405
IL C+ E++++ + G R LG +P++ T
Sbjct: 488 ILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDT 547
Query: 406 KES--PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 463
+ P VGL+ + DPPR + + + + G+ V M+TGD K + +G+
Sbjct: 548 DDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGI 607
Query: 464 GTNMYPSSSLLGQDKDASIAA---LPVDELIEKADG------------------------ 496
+ G + IAA +PV ++ +
Sbjct: 608 ISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYH 659
Query: 497 ----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARSA 551
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ A +D ++ A
Sbjct: 660 TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719
Query: 552 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFM 611
+D++L + + I++ V R IF +K Y ++ I + +PF+
Sbjct: 720 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP--------------EITPFL 765
Query: 612 VLIIA 616
+ IIA
Sbjct: 766 IFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 2e-53
Identities = 147/587 (25%), Positives = 242/587 (41%), Gaps = 93/587 (15%)
Query: 32 FVGIIVLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPG 87
F +L+ ++E G A+ AL +A L P T + DG E +L PG
Sbjct: 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPG 113
Query: 88 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 147
D++ + G+ +P D ++EG+ ++D+S +TGESLPV K D V +G+ G +
Sbjct: 114 DIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 148 IATGVHTFFGKAAHLVD----STNQVGHFQKVLTAIGNFCICSIAV-GIVAEIIIMYPVQ 202
ATG T + LV S + + + +IA+ V +I+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 203 HRKYRDGIDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 259
+ VL+I + +A PTV+ A+ + ++ G + K A+E A +
Sbjct: 233 FALEV----AVTVLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANI 284
Query: 260 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 319
D + DKTGTLT K TV + VF + E + L AA + +E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIV---- 336
Query: 320 DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKV 379
+ + D + + I +G + L N + +
Sbjct: 337 ------SYAKAKGITLSQVSDFKA-IPGIGVEGTVE-------GHTIQLGNEKLLGENGL 382
Query: 380 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 439
+ G S+ VA +L G+L L D + ++ E I+
Sbjct: 383 KTDGEVEEGGGTTSVLVAVNG-------------ELAGVLALADQLKPEAKEVIQALKRR 429
Query: 440 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499
G+ M+TGD K + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 559
V P+ K ++K+LQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 560 GLSVIISAVLTSRAIFQRMKN-------YTIYAVSITIRIVLGFMLI 599
L+ + +A+ SR +R+K Y + A+ I ++ ++
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 4e-52
Identities = 167/624 (26%), Positives = 255/624 (40%), Gaps = 111/624 (17%)
Query: 9 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 68
M AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 69 -KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 127
+VLR G E L GDV+ +K G+ VP D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 128 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICS 186
P DEVF+G+ G + VV + K +LV ++ ++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 187 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQG 244
+ +A ++ ++ ++ + LVLL+ P A+ V+S A ++ G
Sbjct: 176 VLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHG 231
Query: 245 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR-NLIEVF--AKGVEK--EHVILLAA 299
+ K A+E +A + + DKTGTLT + V EV A E+ H + A
Sbjct: 232 ILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAI 291
Query: 300 RASRTENQDAID-AAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 358
+ ++ + G GVR V VD I + + A
Sbjct: 292 VDYARKRENVESVEEVPGE---------GVRAV-------VDGGEV--RIGNPRSLEAAV 333
Query: 359 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 418
PE VH D +G
Sbjct: 334 GARPESAGKTI---------VHVARDG----------------------------TYLGY 356
Query: 419 LPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 477
+ L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG--------------- 401
Query: 478 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 537
+DE+ A + PE K EIVK L+E+ M GDG+NDAPAL AD+
Sbjct: 402 ---------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 538 GIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLG 595
GIA+ A +D A +D+VL LS + A+ +R + +K N I I + I+L
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506
Query: 596 FMLIALIWKFDFSPFMVLIIAILN 619
+ +W ++ ILN
Sbjct: 507 LFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-40
Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 54/345 (15%)
Query: 358 SKGAPEQILALCN-----------CREDVRKKVHAVIDKFAER-GLRSLGVARQEIPEKT 405
KGAPE +L C + ++ + +VI + LR L +A ++IP+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 406 KESPGAPWQ----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 455
+E + +G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 456 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-----------FAGVFPEH 504
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 505 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 564
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 565 ISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTI 623
++AV RAI+ MK + Y +S I +V F+ AL P +L + ++ DG
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738
Query: 624 MTI------SKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVV 662
T KD + P+ + E TG + YL + V
Sbjct: 739 ATALGFNPPDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYV 779
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 6e-37
Identities = 155/832 (18%), Positives = 272/832 (32%), Gaps = 228/832 (27%)
Query: 70 VLRDGRWSEQDASILVPGDVISIKL--GDIVPADARLLEGDPLKIDQSALTGESLPVTKN 127
V+R+G+W + LVPGD++SI +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 128 PYDE------------------VFSG-------STCKQGEIEAVVIATGVHTFFGKAAHL 162
P + +F G A+V+ TG T G+ L
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---L 348
Query: 163 VDS------TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVL 216
V S + + + I +I + + +L ++
Sbjct: 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP--LGKIILRSLDII 406
Query: 217 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL- 275
I +P A+P LS+ + RL ++G I +DV C DKTGTLT + L
Sbjct: 407 TI-VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLD 465
Query: 276 ----------------------TVDRNLIEVFA-------------------KGVEKEHV 294
+ A K E
Sbjct: 466 LRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGW 525
Query: 295 ILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA-LTYIDSDGN 353
L S + + D + + F+ +R + + + + +
Sbjct: 526 TLEEDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERS 578
Query: 354 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-------- 405
KGAPE I +LC+ E V V+ + G R L +A +E+P+ T
Sbjct: 579 PDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLS 637
Query: 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465
+++ + +G + +P + D+ E I+ + MITGD R G+
Sbjct: 638 RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI-- 695
Query: 466 NMYPSSSLL-------GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 518
+ PS++L+ K I +D + + +P + + L R H+
Sbjct: 696 -VNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHL 754
Query: 519 CGMTGD--------------------------------------------------GVND 528
M+G G ND
Sbjct: 755 A-MSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGAND 813
Query: 529 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 588
ALK+AD+GI++++A A A+ +S + + + R A+
Sbjct: 814 CGALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRC-----------ALVT 860
Query: 589 TIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFAT 648
+ ++ L +LI + S + LI + L DG +TI
Sbjct: 861 SFQMFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTID--------------------- 898
Query: 649 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQ-ALIFV 707
L ++ V + R + S + RP + ++Y+ S++ Q L +
Sbjct: 899 -------LLLIFPVALLMSR-----NKPLKKLS-KERPPSNLFSVYILTSVLIQFVLHIL 945
Query: 708 TRSRSWSFIER-----------------PGLLLATAFVIA--QLVATFIAVY 740
++ + P LL F ++ Q + T I
Sbjct: 946 SQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNS 997
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 7e-35
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 11 AAAIMAIALANGGGRDPDWQDFVG---IIVLLVINSTISFIEENNAGNAAAALMANLAPK 67
AA ++ LA + FV I+++LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 68 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 127
KVLRDGRWS A LVPGD++ + +GD VPAD R+L L++DQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 128 ----PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 173
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 174 KVLTAIGNFC------ICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLV---LLIGGIPI 223
K L G IC I V ++ P + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLIC-ILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 283
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV----CK 309
Query: 284 VFA 286
V A
Sbjct: 310 VVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 9e-33
Identities = 129/506 (25%), Positives = 212/506 (41%), Gaps = 84/506 (16%)
Query: 69 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 128
+ DG A+ L GD++ ++ G+I+P+D ++EG +D+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 129 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC 185
+ V G+ ++ + A TF + LV+ + QK I I
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALT-IL 221
Query: 186 SIAVGIVAEIII--MYPVQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 239
+ ++ + + +YP Y G + L+ LL+ IP + +LS G R
Sbjct: 222 LSGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279
Query: 240 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFAKGVEKEHVILLA 298
++Q I A+E +D L DKTGT+TL N+ + I V GV +E + A
Sbjct: 280 VTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAA 335
Query: 299 ARASRTENQDAIDAAIVGMLADPKEARAGVREVH----FLPFNPVDKRTALTYIDSDGNW 354
AS ++ +IV LA ++ F+PF +T ++ +D G
Sbjct: 336 QLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG- 389
Query: 355 HRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 413
KGA + I R + + + A +D+ + G L V
Sbjct: 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------- 436
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 469
+++G++ L D + E +G+ MITGD AI E G
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG----------- 485
Query: 470 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 529
VD+ I +A PE K ++++ Q + MTGDG NDA
Sbjct: 486 -----------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 522
Query: 530 PALKKADIGIAVADATDAARSASDIV 555
PAL +AD+G+A+ T AA+ A+++V
Sbjct: 523 PALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-31
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 73/444 (16%)
Query: 282 IEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDK 341
I VFAK + H L N++ + + E PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 342 RTALTYIDSDGNWHRA-SKGAPEQILALCNC----------------REDVRKKVHAVID 384
R A Y D+ G + +KGA E+I+ C+ RE + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 385 KFAERGLRSLGVARQEI---------------PEKTKESPGAPWQLVGLLPLFDPPRHDS 429
A GLR L A + T ES + +GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 430 AETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSS-------LLGQDKDAS 481
A + + G+NV M+TGD K + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 482 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541
++ VD+L A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 542 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + ++I
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 601 LIWK-------FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PQPDS------WKL 642
L ++ F SP +L I I + M + ++ P D+ +L
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKEL 889
Query: 643 -KEIFATGVVLG-SYLAIMTVVFF 664
++FA G LG S LA T + +
Sbjct: 890 IIDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 2e-28
Identities = 152/528 (28%), Positives = 227/528 (42%), Gaps = 91/528 (17%)
Query: 59 ALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 117
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 118 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 169
TGES+PV + ++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 170 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVL 229
F ++ T + ++ V +V ++ P Q YR L +LLI G P A+ V+
Sbjct: 354 DRFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VI 404
Query: 230 SVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 287
S AI S +++GA+ K A+E++ + + DKTGTLT K V I
Sbjct: 405 STPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT- 461
Query: 288 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL-- 345
G+ + ++ LAA A++ LA A VR L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 346 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 405
+ I+ N R AP K+ + D FA + + E KT
Sbjct: 510 SGIEGQVNGERVLICAPG--------------KLPPLADAFAGQ------INELESAGKT 549
Query: 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465
++GL+ L D R D+ + I LG+ M+TGD
Sbjct: 550 VVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN--------------- 594
Query: 466 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 525
P ++ A+IA EL D AG+ PE K + V L + + M GDG
Sbjct: 595 ---PRAA-------AAIAG----EL--GIDFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 526 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 573
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (301), Expect = 5e-28
Identities = 133/606 (21%), Positives = 255/606 (42%), Gaps = 84/606 (13%)
Query: 3 NPLSWVMEAAAIMAIALA--------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 54
NP+ +V+E ++A+ L R + F+ +++ LV + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGK 91
Query: 55 NAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 112
A AL ++ +DG + DAS L G ++ + G+ +P D ++++G +
Sbjct: 92 AQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATV 150
Query: 113 DQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 169
D+SA+TGES PV K +D V G++ +E + + H+F K LV+ +
Sbjct: 151 DESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR- 209
Query: 170 GHFQKVLTAIGNFCIC-SIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAMPT 227
+K I F + ++ + + I+ MYP+ + + I L+ L + IP +
Sbjct: 210 ---KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGG 266
Query: 228 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFA 286
+LS G R++Q + K ++E ++VL DKTGT+T N++ I V +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKS 324
Query: 287 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 346
E+ L+ A + D + + LA + ++PF + + +
Sbjct: 325 SSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVK 380
Query: 347 YIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 405
+ + KGAP ++ + + + A++ +++G L V
Sbjct: 381 FTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE---- 431
Query: 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QL---AIGKETGRRL 461
++G++ L D + E R +G+ M TGD +L I KE G
Sbjct: 432 ---------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--- 479
Query: 462 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 521
VD + + PE K +++ Q + HI M
Sbjct: 480 -------------------------VDRFVAECK------PEDKINVIREEQAKGHIVAM 508
Query: 522 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 581
TGDG NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL + + +
Sbjct: 509 TGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSL 568
Query: 582 TIYAVS 587
T ++++
Sbjct: 569 TTFSIA 574
|
Length = 673 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 6e-28
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 61/334 (18%)
Query: 3 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 62
N + V+ AA ++ A+ DW + I ++ +N I FI+E A +L
Sbjct: 62 NAMCMVLIIAAAISFAMH-------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKN 114
Query: 63 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 122
+P V+R+G+ D+ LVPGD+ +K GD +PAD RL+E D++ LTGESL
Sbjct: 115 LASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESL 174
Query: 123 PVTKNPY------DEV---------FSGSTCKQGEIEAVVIATGVHTFFGKAA------- 160
PV K+ + ++ FS S +G + + IAT +++ G A
Sbjct: 175 PVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDG 234
Query: 161 --------------------HLVDSTNQVGHF---------QKVLTAIGNFCICSIAVGI 191
L + G F + L+ + C + I
Sbjct: 235 GLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAI 291
Query: 192 VAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMT 251
+ II+M + ++ + L I IP ++ VLS+TMA+G+ +S++ I +++
Sbjct: 292 IFAIIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLD 351
Query: 252 AIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF 285
A+E + ++ +CSDKTGT+T K+ + I F
Sbjct: 352 ALEALGAVNDICSDKTGTITQGKMIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-26
Identities = 139/581 (23%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 1 MWNPLSWVMEAAAIM----AIALANGGGRDPDWQDFVGII--VLLVINSTISFIEENNAG 54
NP+ +++ +++ IA A+ G + F II +L + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 55 NAAAALMANLAPKTK-------VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 107
A A+ TK + DG + A L GD++ ++ GD++P D ++EG
Sbjct: 90 RGKA--QADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 108 DPLKIDQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 164
+D+SA+TGES PV K + V G+ + A TF + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 165 STNQVGHFQKVLTAIG-NFCICSIAVGIVAEIIIMYPVQHRKYRD---GIDNLLVLLIGG 220
+ +K I + ++ + + ++P Y + L+ LL+
Sbjct: 207 GAQR----RKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCL 260
Query: 221 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDR 279
IP + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
Query: 280 NLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 339
+ A+GV+++ + A AS + D + + +LA R + F
Sbjct: 321 ----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374
Query: 340 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDV-RKKVHAVIDKFAERGLRSLGVAR 398
+T ++ I+ D N KGA + I + +D+ A +G L V
Sbjct: 375 TAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE 433
Query: 399 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIG 454
++ G++ L D + E + +G+ MITGD AI
Sbjct: 434 DN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480
Query: 455 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE 514
E G VD+ I +A PE K ++++ Q
Sbjct: 481 AEAG----------------------------VDDFIAEAT------PEDKIALIRQEQA 506
Query: 515 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 4e-26
Identities = 134/537 (24%), Positives = 207/537 (38%), Gaps = 148/537 (27%)
Query: 69 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 128
K+ G E A+ L GD++ ++ G+I+PAD ++EG +D+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 129 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 174
+ V G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 175 -VLTAIGNFCIC-------SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 226
LT I F + + G I + L+ LL+ IP +
Sbjct: 223 AGLTII--FLLVVATLPPFAAYSGGALSITV---------------LVALLVCLIPTTIG 265
Query: 227 TVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLI 282
+LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE---- 318
Query: 283 EVF--AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-----------------KE 323
F GV +E + DAA + LAD +E
Sbjct: 319 --FLPVPGVTEE---------------ELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 324 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 382
F+PF+ +T ++ +D DG KGA + I ++ A
Sbjct: 362 RDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416
Query: 383 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 442
+D+ A +G L VA +++G++ L D + E +G+
Sbjct: 417 VDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIK 463
Query: 443 VKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498
MITGD L AI E G VD+ + +A
Sbjct: 464 TVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT--- 492
Query: 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
PE K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 1e-18
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYP 469
+ LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 470 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 529
+DE+I AGV P+ K E +KRLQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 530 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 579
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 5e-08
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 86 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEA 145
PG ++ + GD VP D + +G+ +D++ LTGE +P K D V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 146 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMY-- 199
A G HT + +V S ++G ++A+ F + + +V+ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 200 PVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 255
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 256 MAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 299
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 480 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539
A +PV+ + FAG PE K +I++ L++R M G+G ND AL++AD+GI
Sbjct: 63 AEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
Query: 540 AV---ADATDAARSASDIVLTEPGLSVIISA 567
+ +D+VL E + +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473
++GL+ L DP + E ++ G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 474 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 533
P ++ E A ++ L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 534 KAD 536
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 523 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 559
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 488 DELIEKADGFAG------VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADI 537
+ L + G V +K + + L ++ I GDG ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 538 GIAVADATDAARSASDIVLTEPGLSVIIS 566
GIA +A + +DI + + L+ I+
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 504 HKYEIVKRLQERKHICG---MT-GDGVNDAPALKKADIGIAVADATDAARSASDIV 555
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.003
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 308 DAIDAAIVG----MLADPKEARAGVREVHFLPFNPVDKR-TALTYIDSDGNWHRASKGAP 362
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 363 EQILALCN 370
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 38/166 (22%)
Query: 332 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERG 390
+ L FN KR ++ + DG KGA I L + V ++ ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 391 LRSLGVARQEIPEKTKESPGAPWQ-----------------------------LVGLLPL 421
LR+L +A +E+ E+ E W L+G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 467
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 504 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
K ++ L E I GDG+ND L+ A G+A+ +A + ++ +D V
Sbjct: 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 885 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.59 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.25 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.21 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.98 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.83 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.81 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.79 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.79 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.78 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.78 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.73 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.72 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.71 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.66 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.64 | |
| PLN02887 | 580 | hydrolase family protein | 98.62 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.62 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.56 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.5 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.49 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.45 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.42 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.4 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.36 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.35 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.3 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.3 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.27 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.18 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.16 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.09 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.01 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.88 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.87 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.8 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.76 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.74 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.67 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.61 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.57 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.48 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.45 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.34 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.33 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.26 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.07 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.06 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.03 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.03 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.93 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.88 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.87 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.79 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.78 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.77 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.69 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.66 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.64 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.59 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.46 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.36 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.33 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.31 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.3 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.25 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.22 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.1 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.99 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.84 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.74 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.74 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.57 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.51 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.46 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.37 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.3 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.28 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.2 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.19 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.11 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.89 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.76 | |
| PLN02940 | 382 | riboflavin kinase | 94.76 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.72 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.46 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.22 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.12 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.83 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.73 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.57 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.39 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.13 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.88 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.83 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.76 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.61 | |
| PLN02811 | 220 | hydrolase | 92.41 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.07 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.96 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.88 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.73 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 91.47 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 91.44 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.28 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.15 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.83 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.2 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.98 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.91 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 87.3 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.62 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 84.77 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 84.6 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 83.96 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 82.62 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 82.15 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-185 Score=1502.73 Aligned_cols=874 Identities=88% Similarity=1.328 Sum_probs=860.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
||||++|+|++||++++.+.+++++|+||.||++|++++++|++++|+||++|+++.++|++.++|+++|+|||+|.+++
T Consensus 69 m~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~e 148 (942)
T KOG0205|consen 69 MWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQE 148 (942)
T ss_pred HhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeee
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHh
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 160 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~ 160 (885)
+++||||||+.++.||+||||+||++|+.++||||+|||||.||+|++||.+|+||+|++|+++++|++||.+|++||.+
T Consensus 149 As~lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA 228 (942)
T KOG0205|consen 149 ASILVPGDILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (942)
T ss_pred ccccccCceeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHh
Q 002743 161 HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240 (885)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l 240 (885)
++++++++.+|||+.++.|+++|++++++++++.++++|+.+.+.|+..+.+.+++++.++|++||.++++++++|+.||
T Consensus 229 ~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL 308 (942)
T KOG0205|consen 229 HLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308 (942)
T ss_pred HhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCC
Q 002743 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLAD 320 (885)
Q Consensus 241 ~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~ 320 (885)
+++|+++|+++++|+|+++|++|+|||||||.|+++|++..++.+.++.++|+++..|+++++.+++|++|.|+++++.|
T Consensus 309 aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~d 388 (942)
T KOG0205|consen 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLAD 388 (942)
T ss_pred HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeee
Q 002743 321 PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQE 400 (885)
Q Consensus 321 ~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~ 400 (885)
|++++.+|++++++||||.+||.+..|.++||++++++||||++|+++|+.++++++++++.+++|+++|+|.|++|++.
T Consensus 389 PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~ 468 (942)
T KOG0205|consen 389 PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQE 468 (942)
T ss_pred HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccccc
Q 002743 401 IPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480 (885)
Q Consensus 401 ~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~ 480 (885)
.+++.++..+.+|+|+|+..+.||||+|+.++|.+....|++|+|+|||+...+++++|++|+.+|++++..+.|.+.++
T Consensus 469 v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~ 548 (942)
T KOG0205|consen 469 VPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG 548 (942)
T ss_pred cccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 481 ~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+.+.++++++++++.||.++||||+++|+.||++||.|+|+|||+||+||||+||+|||+.+++|+||.+||+|+++++
T Consensus 549 ~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepg 628 (942)
T KOG0205|consen 549 SMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (942)
T ss_pred CCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhccccccccCCCCCCCCCCcc
Q 002743 561 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSW 640 (885)
Q Consensus 561 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~~~~~~ 640 (885)
++.|+.++..+|.+|+||++|.+|+++.++.+++++++..+.|.|.|+|++++++.++||++.|++++|+++|+|.|++|
T Consensus 629 lSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdsw 708 (942)
T KOG0205|consen 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSW 708 (942)
T ss_pred chhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccchh
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~ 720 (885)
+++++|..++++|.|+++++..+||..+.+.||+..||+.....+..+...+.|+++++.+++++|++|+++|+|.++|+
T Consensus 709 kl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg 788 (942)
T KOG0205|consen 709 KLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPG 788 (942)
T ss_pred chhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcH
Confidence 99999999999999999999999999999999999999988877888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchhhhhhhccccccccc
Q 002743 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKK 800 (885)
Q Consensus 721 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~ 800 (885)
++++.+++.++++++++++|++|.|.+.++++|.|..++|+++++.++++++.|+..||.+++++|++.++++++++.|+
T Consensus 789 ~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk 868 (942)
T KOG0205|consen 789 WLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKK 868 (942)
T ss_pred HHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHhhhhhcCCCCCCcccccCCccchhhhHHHHHHHHhHHHHHHhhhccccccchhhhhhcCCChhhhh
Q 002743 801 DYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQ 880 (885)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (885)
+|++++|+++|+.+||++|+.+.++. +|++++++++|||+|++|+|++|++++|+||++|+||+|+|++
T Consensus 869 ~~~~~~~~a~~~~~qrt~~~lq~~~~----------~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~- 937 (942)
T KOG0205|consen 869 DYGKEEREAQWALAQRTLHGLQPPEG----------RELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI- 937 (942)
T ss_pred ccchhhhhhHHHHhhhhhcccCCCcc----------chhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-
Confidence 99999999999999999999999852 7889999999999999999999999999999999999999999
Q ss_pred ccccC
Q 002743 881 QHYTV 885 (885)
Q Consensus 881 ~~~~~ 885 (885)
|||||
T Consensus 938 ~~~t~ 942 (942)
T KOG0205|consen 938 QHYTV 942 (942)
T ss_pred hhccC
Confidence 99997
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-133 Score=1129.69 Aligned_cols=770 Identities=28% Similarity=0.420 Sum_probs=631.9
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|.||++.+|++||++||++. .|.|++.|.+++++|++++++||||++|++++|+++.||.++|+|+|+.+.++
T Consensus 57 F~n~Li~iLL~sA~ISfvl~-------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~ 129 (972)
T KOG0202|consen 57 FDNPLILILLLSAAISFVLA-------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHIL 129 (972)
T ss_pred HHhHHHHHHHHHHHHHHHHH-------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCccccee
Confidence 57999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--------------CCcccccceeeeCeEEEE
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAV 146 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gs~v~~G~~~~~ 146 (885)
+++|||||||.|+-||+||||.||++..++.||||.|||||.|+.|+. .|++|+||.|..|.++|+
T Consensus 130 A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GI 209 (972)
T KOG0202|consen 130 ARELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGI 209 (972)
T ss_pred hhccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEE
Confidence 999999999999999999999999999899999999999999999954 257999999999999999
Q ss_pred EEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhc---c-c---cchHhHHHHHHHH
Q 002743 147 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVL 216 (885)
Q Consensus 147 V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~l~l 216 (885)
|+.||.+|++|++.+.++..+ .++|+|+.++.+++.+.-.+.+..+..+++ .|+. . + ..+.+.|..++++
T Consensus 210 Vi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsL 289 (972)
T KOG0202|consen 210 VIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSL 289 (972)
T ss_pred EEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHH
Confidence 999999999999999998874 699999999999998653222222222222 2221 1 2 4455678888999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc----------
Q 002743 217 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---------- 286 (885)
Q Consensus 217 lv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---------- 286 (885)
.+++||++||+++++++++|.+||+|++++||++.++|+||.+++||||||||||+|+|++.++++....
T Consensus 290 AVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~t 369 (972)
T KOG0202|consen 290 AVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPT 369 (972)
T ss_pred HHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998753111
Q ss_pred -cCC------------------ChH---HHHHHHHHHccC------c-----CCChHHHHHHHhcC-----ChHH-----
Q 002743 287 -KGV------------------EKE---HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE----- 323 (885)
Q Consensus 287 -~~~------------------~~~---~~l~~a~~~~~~------~-----~~~~~~~al~~~~~-----~~~~----- 323 (885)
.++ ..+ ++...++.|+.. . .++|.|.|+...+. +...
T Consensus 370 g~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~ 449 (972)
T KOG0202|consen 370 GTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN 449 (972)
T ss_pred CceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccc
Confidence 001 111 233333333311 1 35788988876542 1110
Q ss_pred ---------HhcCCceEEeecCCCCCccEEEEEEcCCCc--EEEEEcCcHHHHHHhccC------------ChHHHHHHH
Q 002743 324 ---------ARAGVREVHFLPFNPVDKRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVH 380 (885)
Q Consensus 324 ---------~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~ 380 (885)
....++...++||++++|+|++.+.+..|+ +..|.|||+|.|+++|+. ++..++.+.
T Consensus 450 ~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 450 EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 112234558999999999999999876664 789999999999999953 345688899
Q ss_pred HHHHHHHHcCCeEEEEEeeecCC-----------CCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 002743 381 AVIDKFAERGLRSLGVARQEIPE-----------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 449 (885)
Q Consensus 381 ~~~~~~a~~Glr~l~~a~~~~~~-----------~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD 449 (885)
+...+|+++|||+|++|+++.+. ..+...|++|+|+|++++.||||++++++|+.|+++||+|+|+|||
T Consensus 530 ~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD 609 (972)
T KOG0202|consen 530 ANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGD 609 (972)
T ss_pred HHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999997763 1244578999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhCCCCCC--CCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcC
Q 002743 450 QLAIGKETGRRLGMGTNM--YPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 527 (885)
Q Consensus 450 ~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~N 527 (885)
+.+||.+|||++|+..+. .....++|.+.+ .++++++++...+..+|+|++|+||.+||+.||++|++|+|||||+|
T Consensus 610 ~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVN 688 (972)
T KOG0202|consen 610 NKETAEAIAREIGIFSEDEDVSSMALTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVN 688 (972)
T ss_pred CHHHHHHHHHHhCCCcCCccccccccchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCcc
Confidence 999999999999997543 244667777766 78999999999999999999999999999999999999999999999
Q ss_pred ChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcC
Q 002743 528 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-MLIALIWKF 605 (885)
Q Consensus 528 Da~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~-~~~~~~~~~ 605 (885)
|+||||+|||||||| +|||+||+|||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+.++ +...+..+.
T Consensus 689 DApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~ 768 (972)
T KOG0202|consen 689 DAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPE 768 (972)
T ss_pred chhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCC
Confidence 999999999999999 999999999999999999999999999999999999999999999999766555 446677899
Q ss_pred CCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 002743 606 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 677 (885)
Q Consensus 606 ~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 677 (885)
|+.|+|+||+|+++|++ +++|+++++++. ++|.++ ....++...+..|.|+.+.++..|++.+... ....
T Consensus 769 pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~v 846 (972)
T KOG0202|consen 769 PLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKV 846 (972)
T ss_pred cccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCc
Confidence 99999999999999998 699999987653 222222 2344555556679999988885554433210 1111
Q ss_pred Ccccc------CC----------CHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHH
Q 002743 678 GVRSL------RT----------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIA 738 (885)
Q Consensus 678 g~~~~------~~----------~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~ 738 (885)
..+.. .. ......|+.|..+++...++.+++|+.+.+.+.. .|.|+++|+.++++... ..
T Consensus 847 t~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f-~i 925 (972)
T KOG0202|consen 847 TYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHF-LV 925 (972)
T ss_pred ChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhh-eE
Confidence 00000 00 0011237788888999999999999987554332 24489999998876644 44
Q ss_pred Hhhc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 739 VYAN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 739 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
+|.+ ...+++.+++|.-|++++.++..+++++|++|++.|++.
T Consensus 926 lYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 926 LYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred EEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 6654 223467888887777778999999999999999988764
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-127 Score=1162.51 Aligned_cols=719 Identities=60% Similarity=0.944 Sum_probs=644.6
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.|+|+++++++++++ +|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||++++|+
T Consensus 34 ~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~ 106 (755)
T TIGR01647 34 FWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIP 106 (755)
T ss_pred HhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEE
Confidence 68999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHh
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 160 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~ 160 (885)
++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|++||.+|+||.|.+|+++++|++||.+|++||++
T Consensus 107 ~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~ 186 (755)
T TIGR01647 107 ASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAA 186 (755)
T ss_pred hhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHH
Confidence 99999999999999999999999999977999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q 002743 161 HLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 239 (885)
Q Consensus 161 ~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~ 239 (885)
+++++++ +++++|+.+++++++++..+++.+++.+++.+...+.++.+++..++++++++|||+||++++++++.|+++
T Consensus 187 ~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r 266 (755)
T TIGR01647 187 ALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAE 266 (755)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHH
Confidence 9998875 678999999999988766544433333333333256788899999999999999999999999999999999
Q ss_pred hhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcC
Q 002743 240 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 319 (885)
Q Consensus 240 l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~ 319 (885)
|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.. ...+.+.++++.+++.++....+||+|.|+++++.
T Consensus 267 ~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 267 LAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAK 344 (755)
T ss_pred HHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998763 22236677888888877666667999999999877
Q ss_pred ChHHHhcCCceEEeecCCCCCccEEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEe
Q 002743 320 DPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVAR 398 (885)
Q Consensus 320 ~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~ 398 (885)
+....+..++.++++||++.+|+|++++.+++ |+.+.++||+||.++++|++..+.++++++.+++++++|+|++++|+
T Consensus 345 ~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~ 424 (755)
T TIGR01647 345 DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVAR 424 (755)
T ss_pred HhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEE
Confidence 65545567889999999999999999887654 77788999999999999987777778888999999999999999999
Q ss_pred eecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccc
Q 002743 399 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 478 (885)
Q Consensus 399 ~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~ 478 (885)
++ .|++|+|+|+++++||||||++++|++||++||+++|+|||++.||+++|+++||..+.+....+...+.
T Consensus 425 ~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~ 496 (755)
T TIGR01647 425 TD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN 496 (755)
T ss_pred Ec--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcc
Confidence 73 2678999999999999999999999999999999999999999999999999999765444444433334
Q ss_pred ccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcC
Q 002743 479 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558 (885)
Q Consensus 479 ~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~ 558 (885)
.+.++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||+||+||||+|||||||++|+|+||++||+||++
T Consensus 497 ~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 497 RDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred hhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhccccccccCCCCCCCCCC
Q 002743 559 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPD 638 (885)
Q Consensus 559 ~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~~~~ 638 (885)
|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..+.++++++|+|++|+++++|++++++++|+++|+++|+
T Consensus 577 d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~ 656 (755)
T TIGR01647 577 PGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQ 656 (755)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCC
Confidence 99999999999999999999999999999999988777776666778899999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc
Q 002743 639 SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 718 (885)
Q Consensus 639 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~ 718 (885)
+|+.++++..++.+|.++++.++.+||+.+...++...++. .....+.+|++|+.+++.+++++|++|+++.+|.++
T Consensus 657 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~ 733 (755)
T TIGR01647 657 RWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWSER 733 (755)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---cccHhhhHHHHHHHHHHHHHHHHheeccCCCCcccC
Confidence 99999999999999999999999888776642222111111 113457889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 002743 719 PGLLLATAFVIAQLVATFIAV 739 (885)
Q Consensus 719 ~~~~l~~~~~~~~~~~~~~~~ 739 (885)
|++++++++++.++++++++.
T Consensus 734 p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 734 PGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred CcHHHHHHHHHHHHHHHHHhh
Confidence 999999999999888877754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-126 Score=1165.56 Aligned_cols=726 Identities=32% Similarity=0.511 Sum_probs=616.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRW 76 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~ 76 (885)
|+||+.++|+++++++++++ +| .+...|++++++|++++++||+++++++++|+++.+++++|+|||++
T Consensus 78 f~~~~~~iL~~~a~~s~~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~ 150 (917)
T COG0474 78 FKDPFIILLLVAALLSAFVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF 150 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE
Confidence 57999999999999999998 77 56779999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--------------CCcccccceeeeCe
Q 002743 77 SEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGE 142 (885)
Q Consensus 77 ~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gs~v~~G~ 142 (885)
++|+++||||||||.+++||+||||++|+++++++||||+|||||+|+.|.+ .|++|+||.+.+|+
T Consensus 151 ~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~ 230 (917)
T COG0474 151 VEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGR 230 (917)
T ss_pred EEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcce
Confidence 9999999999999999999999999999999888999999999999999963 47899999999999
Q ss_pred EEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHc
Q 002743 143 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGI 221 (885)
Q Consensus 143 ~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 221 (885)
+.++|++||.+|++|+++.++... ...+|+|+.+++++.++..+.+++.++.+++.++..+..|...+..+++++++++
T Consensus 231 ~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~I 310 (917)
T COG0474 231 AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310 (917)
T ss_pred EEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988 6899999999999988766555544444444433323448899999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCC------h---H
Q 002743 222 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---E 292 (885)
Q Consensus 222 P~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~ 292 (885)
|++||+.+++++++|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.+++...-....+ . .
T Consensus 311 PegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~ 390 (917)
T COG0474 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALL 390 (917)
T ss_pred ccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHH
Confidence 999999999999999999999999999999999999999999999999999999999998752011111 0 1
Q ss_pred HHHHHHHHHcc--Cc------CCChHHHHHHHhcC------ChHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEE
Q 002743 293 HVILLAARASR--TE------NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 358 (885)
Q Consensus 293 ~~l~~a~~~~~--~~------~~~~~~~al~~~~~------~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~ 358 (885)
+.+..++.|+. .. .+||+|.|++..+. +.......+++++++||||.+|||++++++.+|+++.++
T Consensus 391 ~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~ 470 (917)
T COG0474 391 RFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFV 470 (917)
T ss_pred HHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEE
Confidence 23444445542 22 46999999999874 344455667889999999999999999997788899999
Q ss_pred cCcHHHHHHhccC-------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCceeeEeeccCCCCCc
Q 002743 359 KGAPEQILALCNC-------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRH 427 (885)
Q Consensus 359 KGa~e~il~~~~~-------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~ 427 (885)
|||||.|+++|+. .++.++.+.+..++|+++|||++++|||..+..+. +..|++|+|+|+++|+||||+
T Consensus 471 KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~ 550 (917)
T COG0474 471 KGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550 (917)
T ss_pred cCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCc
Confidence 9999999999974 45667889999999999999999999998766543 578999999999999999999
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHH
Q 002743 428 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYE 507 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 507 (885)
|++++|+.|+++||++||+||||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||++|+||.+
T Consensus 551 ~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~ 629 (917)
T COG0474 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKAR 629 (917)
T ss_pred cHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHH
Confidence 9999999999999999999999999999999999987654333355666555 777889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHH
Q 002743 508 IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586 (885)
Q Consensus 508 iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 586 (885)
+|+.||++||+|+|||||+||+||||+|||||||| +|+|+||+|||+++++++|++|+.+|+|||++|+|++|++.|.+
T Consensus 630 IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l 709 (917)
T COG0474 630 IVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLL 709 (917)
T ss_pred HHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhc-CCCcHHHHHHHHHHhhcc-ccccccCCC-----C-CCCCCCc--ccHHHHHHHHHHHHHH
Q 002743 587 SITIRIVLGFMLIAL-IWK-FDFSPFMVLIIAILNDGT-IMTISKDRV-----K-PSPQPDS--WKLKEIFATGVVLGSY 655 (885)
Q Consensus 587 ~~ni~~~~~~~~~~~-~~~-~~~~~~~il~i~i~~d~~-~~~l~~d~~-----~-~~~~~~~--~~~~~~~~~~~~~g~~ 655 (885)
++|+..++.++++.+ .++ .||+|+|++|+|+++|++ +++++.+++ + |+++|.+ |+.+.++.+.+..|..
T Consensus 710 ~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~ 789 (917)
T COG0474 710 SKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLL 789 (917)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHH
Confidence 999986666665544 344 689999999999999986 577766642 2 2234555 7777777778887888
Q ss_pred HHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHH
Q 002743 656 LAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQL 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~ 732 (885)
.++.+++.|.+.+.... ....+... .....+++.|+.+++++.++.+..|+.+.+|++. +++.+++++++..+
T Consensus 790 ~~i~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 865 (917)
T COG0474 790 SAILFILTFLLYLLGFI-ANTLGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIII 865 (917)
T ss_pred HHHHHHHHHHHHHHhcc-ccccchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHH
Confidence 88888776666553211 11111000 1556789999999999999999999987655544 45566666666655
Q ss_pred HHHHHH
Q 002743 733 VATFIA 738 (885)
Q Consensus 733 ~~~~~~ 738 (885)
+..+..
T Consensus 866 l~l~~~ 871 (917)
T COG0474 866 LQLLII 871 (917)
T ss_pred HHHHHH
Confidence 544443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-124 Score=1145.21 Aligned_cols=756 Identities=27% Similarity=0.412 Sum_probs=632.3
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC------C
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------G 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd------g 74 (885)
|+||+.++|+++++++++++ +|.++++|++++++|.+++++||+|+++++++|+++.+++++|+|| |
T Consensus 101 ~~~p~~~lL~~aa~ls~~~~-------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g 173 (902)
T PRK10517 101 YRNPFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGEN 173 (902)
T ss_pred HHhHHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCC
Confidence 68999999999999999997 9999999999999999999999999999999999999999999999 7
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC-------------cccccceeeeC
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQG 141 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G 141 (885)
++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|
T Consensus 174 ~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G 253 (902)
T PRK10517 174 GWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSG 253 (902)
T ss_pred eEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeee
Confidence 89999999999999999999999999999999988999999999999999999874 79999999999
Q ss_pred eEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHH
Q 002743 142 EIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG 220 (885)
Q Consensus 142 ~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~ 220 (885)
++.++|++||.+|++||+++++++. .+++++|+.+++++++++.+.++...+.++ .+.+...+|.+++..++++++++
T Consensus 254 ~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~ 332 (902)
T PRK10517 254 TAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGL 332 (902)
T ss_pred eEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 578999999999988765444332222222 22233457888999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHH
Q 002743 221 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300 (885)
Q Consensus 221 iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~ 300 (885)
|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.
T Consensus 333 ~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l 409 (902)
T PRK10517 333 TPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWL 409 (902)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999987631 223455677777776
Q ss_pred HccCc--CCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-----
Q 002743 301 ASRTE--NQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----- 371 (885)
Q Consensus 301 ~~~~~--~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----- 371 (885)
++... .+||+|.|++.++... ......++.++++||||.+|+|++++.+.++.+..++||+||.++++|+.
T Consensus 410 ~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 489 (902)
T PRK10517 410 NSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNG 489 (902)
T ss_pred cCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCC
Confidence 55432 4699999999887532 22345688899999999999999998777777889999999999999963
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeE
Q 002743 372 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNV 443 (885)
Q Consensus 372 -----~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v 443 (885)
+++.++++.+..++++++|+|++++||++++..+. ...|++++|+|+++++||||||++++|++|+++||+|
T Consensus 490 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v 569 (902)
T PRK10517 490 EIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTV 569 (902)
T ss_pred CeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEE
Confidence 22345667778899999999999999998764322 1237799999999999999999999999999999999
Q ss_pred EEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEc
Q 002743 444 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 523 (885)
Q Consensus 444 ~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miG 523 (885)
+|+||||+.||.++|+++||.. ..++.|.+.+ .++++++++.+++.++|||++|+||.++|+.||++|++|+|||
T Consensus 570 ~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~G 644 (902)
T PRK10517 570 KILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMG 644 (902)
T ss_pred EEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEEC
Confidence 9999999999999999999952 3456666655 7889999999999999999999999999999999999999999
Q ss_pred CCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002743 524 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW 603 (885)
Q Consensus 524 DG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~ 603 (885)
||+||+||||+||||||||+|+|+||++||+||++|+|++|++++++||++|+||+|++.|.++.|+..++.+++..+++
T Consensus 645 DGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 645 DGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777766666
Q ss_pred c-CCCcHHHHHHHHHHhhccccccccCCCCCC--CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcc
Q 002743 604 K-FDFSPFMVLIIAILNDGTIMTISKDRVKPS--PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 680 (885)
Q Consensus 604 ~-~~~~~~~il~i~i~~d~~~~~l~~d~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 680 (885)
+ +|++|+|++|+|+++|.+.+++++|++++. ++|++|+.+.+...++..|.+.+++++..|++++.. ++..
T Consensus 725 ~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~ 798 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN 798 (902)
T ss_pred hhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc
Confidence 6 699999999999999987899999999887 378889888888888888999888887666654321 1111
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccch--hhHHH
Q 002743 681 SLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGWAG 757 (885)
Q Consensus 681 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 757 (885)
. .......++..|+.+++++.+++|++|+++ ++|.++|.+..+++.++.+++..++++..-.+++.+.+++ +..|+
T Consensus 799 ~-~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 877 (902)
T PRK10517 799 T-PETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWL 877 (902)
T ss_pred c-hhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHH
Confidence 0 001123456679999999999999999987 5555555555444444444433333311112344566777 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 758 VIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 758 ~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
++++++ +.++.++.|....+.+
T Consensus 878 ~~~~~~--~~~~~e~~K~~~~~~~ 899 (902)
T PRK10517 878 VAILAG--YMTLTQLVKGFYSRRY 899 (902)
T ss_pred HHHHHH--HHHHHHHHHHHHHHhh
Confidence 433333 3366788886644443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-123 Score=1139.35 Aligned_cols=764 Identities=26% Similarity=0.400 Sum_probs=632.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcC----CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC---
Q 002743 1 MWNPLSWVMEAAAIMAIALANG----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD--- 73 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd--- 73 (885)
|+||+.++|+++++++++++.. .+...+|.++++|++++++|++++++||+++++++++|+++.+++++|+||
T Consensus 79 f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 79 FNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 6899999999999999998632 123358999999999999999999999999999999999999999999999
Q ss_pred ---CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC----------------------
Q 002743 74 ---GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP---------------------- 128 (885)
Q Consensus 74 ---g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~---------------------- 128 (885)
|++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+
T Consensus 159 ~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~ 238 (903)
T PRK15122 159 GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLD 238 (903)
T ss_pred CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCccc
Confidence 4899999999999999999999999999999999889999999999999999975
Q ss_pred -CCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchH
Q 002743 129 -YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYR 207 (885)
Q Consensus 129 -~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 207 (885)
+|++|+||.|.+|+++++|++||.+|++||+++++.+.+.++++|+.++++++++..+..+++.+.+++ ......+|.
T Consensus 239 ~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~ 317 (903)
T PRK15122 239 LPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWL 317 (903)
T ss_pred ccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHH
Confidence 368999999999999999999999999999999998766778999999998876544332222222222 222356788
Q ss_pred hHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeeccc
Q 002743 208 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 287 (885)
Q Consensus 208 ~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 287 (885)
+++..++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 318 ~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~ 394 (903)
T PRK15122 318 EALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VS 394 (903)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999998652 22
Q ss_pred CCChHHHHHHHHHHccC--cCCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHH
Q 002743 288 GVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPE 363 (885)
Q Consensus 288 ~~~~~~~l~~a~~~~~~--~~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e 363 (885)
+.+.++++.+++.++.. ..+||+|.|++.++.+. ......++.++++||++.+|+|++++++.+|+++.++|||||
T Consensus 395 ~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e 474 (903)
T PRK15122 395 GRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVE 474 (903)
T ss_pred CCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHH
Confidence 34456677776654332 24699999999887532 122346788999999999999999998778888999999999
Q ss_pred HHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCceeeEeeccCCCCCcc
Q 002743 364 QILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHD 428 (885)
Q Consensus 364 ~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~-----~~~e~~l~llG~i~i~D~lr~~ 428 (885)
.++++|+. +++.++++.+..++++++|+|++++||++++.++. +..|++++|+|+++++||||||
T Consensus 475 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~ 554 (903)
T PRK15122 475 EMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKES 554 (903)
T ss_pred HHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHH
Confidence 99999963 23345677888899999999999999998765321 2357899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHH
Q 002743 429 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEI 508 (885)
Q Consensus 429 ~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 508 (885)
++++|++||++||+|+|+||||+.||.++|+++||.. ...+.|.+.+ .++++++++.+++.++|||++|+||+++
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~i 629 (903)
T PRK15122 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRV 629 (903)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHH
Confidence 9999999999999999999999999999999999953 3456666555 7889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHH
Q 002743 509 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 588 (885)
Q Consensus 509 V~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ 588 (885)
|+.||++|++|+|||||+||+||||+||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.
T Consensus 630 V~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~ 709 (903)
T PRK15122 630 LKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASS 709 (903)
T ss_pred HHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhhccccccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 589 TIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFW 665 (885)
Q Consensus 589 ni~~~~~~~~~~~~~~-~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 665 (885)
|+..++.+++..++.+ +|++|+|++|+|+++|.+++++++|++.+.. +|.+|+.+.+-..++..|.+.+++++..|+
T Consensus 710 n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 789 (903)
T PRK15122 710 NFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFA 789 (903)
T ss_pred hHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9987776665555555 7899999999999999888999999988764 778887765555556677777777776555
Q ss_pred HHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccc
Q 002743 666 LMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWS 744 (885)
Q Consensus 666 ~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 744 (885)
+++.. +. .+. . ......+|..|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.+++++..--.
T Consensus 790 ~~~~~--~~--~~~--~-~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 862 (903)
T PRK15122 790 LMWFV--FA--ANS--V-EMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA 862 (903)
T ss_pred HHHHH--hc--cCc--H-hhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 43211 00 010 0 00013457889999999999999999987 44444444443443333333333332200012
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002743 745 FARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
++.+.++++..|++++.++++++++.|+.|.+.++.
T Consensus 863 ~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 863 MVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRR 898 (903)
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 346778888888887888888888899988654443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-122 Score=1133.55 Aligned_cols=758 Identities=25% Similarity=0.388 Sum_probs=626.2
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEe------CC
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r------dg 74 (885)
|+||+.|+|+++++++++++ +|.++++|++++++|.+++++||+|+++++++|+++.+++++|+| ||
T Consensus 67 ~~~p~~~iL~~~a~ls~~~~-------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg 139 (867)
T TIGR01524 67 FNNPFIYILAMLMGVSYLTD-------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNG 139 (867)
T ss_pred HhhHHHHHHHHHHHHHHHHh-------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCC
Confidence 68999999999999999997 999999999999999999999999999999999999999999999 99
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC-------------cccccceeeeC
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQG 141 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G 141 (885)
++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|
T Consensus 140 ~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G 219 (867)
T TIGR01524 140 SMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSG 219 (867)
T ss_pred eEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEe
Confidence 99999999999999999999999999999999988999999999999999999874 69999999999
Q ss_pred eEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHc
Q 002743 142 EIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGI 221 (885)
Q Consensus 142 ~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 221 (885)
+++++|++||.+|++||+++++++.++++++|+.++++++++..+.++...+.++ .+.+...+|.+++..++++++++|
T Consensus 220 ~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~i 298 (867)
T TIGR01524 220 HAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLT 298 (867)
T ss_pred EEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999886677899999999998865544432322222 222344578889999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHH
Q 002743 222 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 301 (885)
Q Consensus 222 P~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~ 301 (885)
||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.+
T Consensus 299 P~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~ 375 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLN 375 (867)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999988641 2234566677777655
Q ss_pred ccCc--CCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC------
Q 002743 302 SRTE--NQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 371 (885)
Q Consensus 302 ~~~~--~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 371 (885)
+... .+||+|.|++.++.+. ......++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+.
T Consensus 376 ~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~ 455 (867)
T TIGR01524 376 SYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGA 455 (867)
T ss_pred CCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCc
Confidence 4432 3599999999887532 22345688899999999999999998776666789999999999999963
Q ss_pred ----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEE
Q 002743 372 ----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 444 (885)
Q Consensus 372 ----~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~ 444 (885)
+++.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+++
T Consensus 456 ~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vv 535 (867)
T TIGR01524 456 VVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVK 535 (867)
T ss_pred eecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEE
Confidence 23445678888999999999999999998765432 12478899999999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcC
Q 002743 445 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 524 (885)
Q Consensus 445 mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGD 524 (885)
|+||||+.||.++|+++||.. ...+.|.+.+ .++++++.+.+++.++|||++||||+++|+.||++|++|+|+||
T Consensus 536 miTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD 610 (867)
T TIGR01524 536 VLTGDNEIVTARICQEVGIDA----NDFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGD 610 (867)
T ss_pred EEcCCCHHHHHHHHHHcCCCC----CCeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECC
Confidence 999999999999999999963 2455565554 67888999999999999999999999999999999999999999
Q ss_pred CcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002743 525 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK 604 (885)
Q Consensus 525 G~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~ 604 (885)
|+||+||||+||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.|+..++.+++..++++
T Consensus 611 GvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 611 GINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred CcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877766655555
Q ss_pred -CCCcHHHHHHHHHHhhccccccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccc
Q 002743 605 -FDFSPFMVLIIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 681 (885)
Q Consensus 605 -~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 681 (885)
+|++|+|++|+|+++|.+++++++|++.+.. +|++|+.+.+...++..|.+.+++++..|++++... +..+
T Consensus 691 ~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~ 764 (867)
T TIGR01524 691 FLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SANT 764 (867)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------cccc
Confidence 7999999999999999778999999988763 566688777777777889988877776665543211 0000
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHH
Q 002743 682 LRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIW 760 (885)
Q Consensus 682 ~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (885)
. ......++..|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.++++..+-..++.+.++++.|+.+++
T Consensus 765 ~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~ 843 (867)
T TIGR01524 765 V-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLI 843 (867)
T ss_pred h-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHH
Confidence 0 01223568889999999999999999987 444444433333333333333222221100123456655443322222
Q ss_pred HHHHHHHHHHHHHHHHhHHhc
Q 002743 761 LYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 761 ~~~~~~~~~~~~~k~~~r~~~ 781 (885)
.+.+.+.++.|+.|.+..+.+
T Consensus 844 ~~~~~~~~~~e~~k~~~~~~~ 864 (867)
T TIGR01524 844 AILVGYMATMQLVKTFYIRRF 864 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 333333366788887655443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-123 Score=1148.56 Aligned_cols=765 Identities=26% Similarity=0.397 Sum_probs=622.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.++|++|++++++++ +|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+
T Consensus 60 ~~~~~~~iL~~aails~~~~-------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~ 132 (1053)
T TIGR01523 60 VCNAMCMVLIIAAAISFAMH-------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAID 132 (1053)
T ss_pred HhCHHHHHHHHHHHHHHHHh-------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecC
Confidence 57999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---------------CcccccceeeeCeEEE
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEA 145 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gs~v~~G~~~~ 145 (885)
++||||||||.|++||+|||||||++++++.||||+|||||.||.|.+. |++|+||.|.+|++.+
T Consensus 133 a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~ 212 (1053)
T TIGR01523 133 SHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKG 212 (1053)
T ss_pred HhhCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEE
Confidence 9999999999999999999999999998999999999999999999642 5789999999999999
Q ss_pred EEEEeccchhhhhHhhhhhccC------------------------------------CCCcHHHHHHHHHHHHHHHHHH
Q 002743 146 VVIATGVHTFFGKAAHLVDSTN------------------------------------QVGHFQKVLTAIGNFCICSIAV 189 (885)
Q Consensus 146 ~V~~tG~~T~~gki~~l~~~~~------------------------------------~~~~~~~~~~~i~~~~~~~i~~ 189 (885)
+|++||.+|++||+++++++.+ .++|+|+.++++++++.++.++
T Consensus 213 vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~ 292 (1053)
T TIGR01523 213 ICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAII 292 (1053)
T ss_pred EEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886432 1389999999999875544333
Q ss_pred HHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCC
Q 002743 190 GIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 269 (885)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGT 269 (885)
..++.+++.+. ..+...+.+.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||
T Consensus 293 ~~~~~~~~~~~---~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGT 369 (1053)
T TIGR01523 293 FAIIVMAAHKF---DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGT 369 (1053)
T ss_pred HHHHHHHHHhh---hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCc
Confidence 22222221111 122466778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEeeee---c-----ccCC---------------------------------------C---------hHH
Q 002743 270 LTLNKLTVDRNLIEV---F-----AKGV---------------------------------------E---------KEH 293 (885)
Q Consensus 270 LT~n~m~v~~~~~~~---~-----~~~~---------------------------------------~---------~~~ 293 (885)
||+|+|+|.+++... + ..++ + ..+
T Consensus 370 LT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1053)
T TIGR01523 370 ITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIK 449 (1053)
T ss_pred cccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHH
Confidence 999999999876421 0 0000 0 012
Q ss_pred HHHHHHHHccC------------cCCChHHHHHHHhcCCh----------HHH-------------------hcCCceEE
Q 002743 294 VILLAARASRT------------ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVH 332 (885)
Q Consensus 294 ~l~~a~~~~~~------------~~~~~~~~al~~~~~~~----------~~~-------------------~~~~~~l~ 332 (885)
++..++.|+.. ..+||+|.|++.++... .+. ...|++++
T Consensus 450 ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 450 LLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred HHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 44445554421 12599999998875311 111 23478899
Q ss_pred eecCCCCCccEEEEEEcCCC-cEEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEee
Q 002743 333 FLPFNPVDKRTALTYIDSDG-NWHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQ 399 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g-~~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~Glr~l~~a~~ 399 (885)
.+||+|.+|||+++++++++ ++++++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 99999999999999987655 4789999999999999963 2334677888999999999999999999
Q ss_pred ecCCCC------------CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC
Q 002743 400 EIPEKT------------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 467 (885)
Q Consensus 400 ~~~~~~------------~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~ 467 (885)
.+++++ .+..|++|+|+|+++++||||||++++|++||++||+|+|+|||++.||.++|+++||..+.
T Consensus 610 ~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 610 SFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred ECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 886532 23468899999999999999999999999999999999999999999999999999996431
Q ss_pred C--------CCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 468 Y--------PSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 468 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
. ...++.|.+.+ .++++++++++++..+|||++|+||.++|+.+|++|++|+|||||+||+||||+|||||
T Consensus 690 ~~~~~~~~~~~~vitG~~l~-~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 690 FIHDRDEIMDSMVMTGSQFD-ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred ccccccccccceeeehHHhh-hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 1 12355555544 67788899999999999999999999999999999999999999999999999999999
Q ss_pred Eec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCcHHHH
Q 002743 540 AVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMV 612 (885)
Q Consensus 540 a~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~------~~~~~~~~i 612 (885)
||| +|+|+|+++||++|++|+|++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|+
T Consensus 769 Amg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qi 848 (1053)
T TIGR01523 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEI 848 (1053)
T ss_pred ecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHH
Confidence 998 8999999999999999999999999999999999999999999999998877776655542 368999999
Q ss_pred HHHHHHhhcc-ccccccCCCCCC-----CCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------c
Q 002743 613 LIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD--------A 676 (885)
Q Consensus 613 l~i~i~~d~~-~~~l~~d~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~ 676 (885)
+|+|+++|++ ++++++|++.+. |++ ++...++++...+..|+++++.++..|++.++. +..+ .
T Consensus 849 L~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ 927 (1053)
T TIGR01523 849 LWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAH 927 (1053)
T ss_pred HHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccc
Confidence 9999999965 699999887543 222 222234566667788999998888766644321 1000 0
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHH
Q 002743 677 FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIA 738 (885)
Q Consensus 677 ~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~ 738 (885)
++.. . ....+.+|+.|.++++++.+++|++|+.+.+.+. ..+.|++++++++.++..+ .
T Consensus 928 ~~~~-~-~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-~ 1004 (1053)
T TIGR01523 928 YHAG-C-NDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFP-T 1004 (1053)
T ss_pred cccc-c-cchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHH-H
Confidence 1100 0 1244678999999999999999999997633211 1345777777777665433 3
Q ss_pred Hhhc-c--cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 739 VYAN-W--SFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 739 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
+|.+ . ..+.+.+++|.|+. +++++++.++..|+.|+++|+..
T Consensus 1005 ~~~p~~~~~~f~~~~l~~~w~~-~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1005 IYIPVINDDVFKHKPIGAEWGL-AAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HhhhhhhhhhhccCCcchHHHH-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 5543 2 25567778886654 57888888999999998876553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-117 Score=1097.01 Aligned_cols=767 Identities=22% Similarity=0.340 Sum_probs=621.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCceEEEeC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG------GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRD 73 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~-~~~~~~V~rd 73 (885)
|++|+.++|+++++++++++.. .++..+|.++++|+++++++.++++++|++++++.++|++. .+++++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 5799999999999999998721 23345899999999999999999999999999999999874 4789999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc--ccccceeeeCeEEEEEEEec
Q 002743 74 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATG 151 (885)
Q Consensus 74 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gs~v~~G~~~~~V~~tG 151 (885)
|++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 9999999999999999999999999999999999889999999999999999998875 99999999999999999999
Q ss_pred cchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhcc---c---------cchHhHHHHHHHH
Q 002743 152 VHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVL 216 (885)
Q Consensus 152 ~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~l~l 216 (885)
.+|++||++++++.+++++++|+.++++.+++...+++..++.+++ .|... . .++.+.+..++++
T Consensus 254 ~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~l 333 (941)
T TIGR01517 254 VNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTI 333 (941)
T ss_pred CCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHH
Confidence 9999999999998876778999999998887543322211111111 11111 1 2466788899999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc---cC----C
Q 002743 217 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----V 289 (885)
Q Consensus 217 lv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---~~----~ 289 (885)
++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++...... .+ .
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 413 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNV 413 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999987643210 00 0
Q ss_pred C--hHHHHHHHHH-HccCc-----------CCChHHHHHHHhcC----ChHHHhcCCceEEeecCCCCCccEEEEEEcCC
Q 002743 290 E--KEHVILLAAR-ASRTE-----------NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSD 351 (885)
Q Consensus 290 ~--~~~~l~~a~~-~~~~~-----------~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~ 351 (885)
+ ..+++..++. ++... .+||+|.|+++++. +..+.+..++.++.+||+|.+|||+++++..+
T Consensus 414 ~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~ 493 (941)
T TIGR01517 414 PKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG 493 (941)
T ss_pred CHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCC
Confidence 0 1222333332 22211 25899999998864 33344456778899999999999999998777
Q ss_pred CcEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEe
Q 002743 352 GNWHRASKGAPEQILALCNCR----------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGL 418 (885)
Q Consensus 352 g~~~~~~KGa~e~il~~~~~~----------~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~ 418 (885)
++++.++|||||.++++|+.. .+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+
T Consensus 494 ~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGl 573 (941)
T TIGR01517 494 GKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGV 573 (941)
T ss_pred CcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEE
Confidence 778999999999999999631 0135678888999999999999999999864332 334789999999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
++++||||||++++|++||++||+++|+||||+.||.++|+++||.++. ..++.|.+.+ .++++++++.+++.++||
T Consensus 574 i~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfa 650 (941)
T TIGR01517 574 VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLA 650 (941)
T ss_pred eeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEE
Confidence 9999999999999999999999999999999999999999999997532 2455555544 677889999999999999
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHH
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 577 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~ 577 (885)
|++|+||+++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|
T Consensus 651 r~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~n 730 (941)
T TIGR01517 651 RSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDN 730 (941)
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCccc----HHHHHHH
Q 002743 578 MKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSWK----LKEIFAT 648 (885)
Q Consensus 578 i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~~----~~~~~~~ 648 (885)
+++++.|.+++|+..++..++. .+..++|++|+|++|+|+++|.+ ++++++|++.+. ++|.+|+ .+.++..
T Consensus 731 i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~ 810 (941)
T TIGR01517 731 IRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKN 810 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHH
Confidence 9999999999999766555543 44567899999999999999975 799999887553 2333332 3456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC--Cc---ccchhHH
Q 002743 649 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SF---IERPGLL 722 (885)
Q Consensus 649 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~--~~---~~~~~~~ 722 (885)
.+..|+++++++++.+++... ++.. .+... ........+|+.|.++++++.++.+++|+.+. +| ++| ++
T Consensus 811 i~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n--~~ 885 (941)
T TIGR01517 811 ILGQAGYQLVVTFILLFAGGS--IFDV-SGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKN--RI 885 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--hhcc-cCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccccccccccc--HH
Confidence 777899988888876665431 1110 01000 00123457899999999999999999998653 22 334 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 723 LATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 776 (885)
Q Consensus 723 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 776 (885)
+++++++..++..++..+. -.++++.+++|..|+.+++++++.+++.++.|++
T Consensus 886 ~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 886 FVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555555555543333332 2345677788888888888888888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-117 Score=1099.72 Aligned_cols=776 Identities=23% Similarity=0.371 Sum_probs=627.6
Q ss_pred CcchHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG------GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg 74 (885)
|+||+.++|+++++++++.... .....+|.+++++++++++|++++++||+|+++++++|+++.+++++|+|||
T Consensus 70 ~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg 149 (997)
T TIGR01106 70 LFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG 149 (997)
T ss_pred HhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC
Confidence 6899999999999998876321 1123479999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC----------cccccceeeeCeEE
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gs~v~~G~~~ 144 (885)
++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.
T Consensus 150 ~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~ 229 (997)
T TIGR01106 150 EKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTAR 229 (997)
T ss_pred EEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEE
Confidence 99999999999999999999999999999999987999999999999999998864 69999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCC
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 223 (885)
++|++||.+|++|++++++++. .+++|+|+.++++++++....++..++ +++.+...+.+|.+.+..++++++++|||
T Consensus 230 ~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~ 308 (997)
T TIGR01106 230 GIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPE 308 (997)
T ss_pred EEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCc
Confidence 9999999999999999998775 467999999999988765544332222 22222334567888899999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeec--c-cC--------CCh-
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-KG--------VEK- 291 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--~-~~--------~~~- 291 (885)
+||++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.++++... . .+ .+.
T Consensus 309 ~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (997)
T TIGR01106 309 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKS 388 (997)
T ss_pred cchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcc
Confidence 99999999999999999999999999999999999999999999999999999998864211 0 00 111
Q ss_pred ----HHHHHHHHHHccC---------------cCCChHHHHHHHhcC----ChHHHhcCCceEEeecCCCCCccEEEEEE
Q 002743 292 ----EHVILLAARASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 292 ----~~~l~~a~~~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pf~s~~kr~sv~~~ 348 (885)
+.++..++.|+.. ..+||.|.|+++++. +..+.+..++.++.+||+|.+|||++++.
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~ 468 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHE 468 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEe
Confidence 2355555555421 125899999998763 33445677899999999999999998876
Q ss_pred cC---CCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---------
Q 002743 349 DS---DGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~---~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
.. ++++++++|||||.|+++|+. +++.++++.+.+++++++|+||+++||+.+++++.
T Consensus 469 ~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~ 548 (997)
T TIGR01106 469 NEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTD 548 (997)
T ss_pred ccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccch
Confidence 32 246789999999999999962 23456778889999999999999999998864321
Q ss_pred --CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~--------------- 469 (885)
+..|++|+|+|+++++||||||++++|++|+++||+++|+|||++.+|.++|+++|+..+...
T Consensus 549 ~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~ 628 (997)
T TIGR01106 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQ 628 (997)
T ss_pred hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccc
Confidence 123789999999999999999999999999999999999999999999999999999643210
Q ss_pred -------CccccCcccccccCcchHHHHHHhcC--eEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
..++.|.+.+ .++++++++++++.. ||||++|+||+++|+.+|++|++|+|+|||+||+||||+||||||
T Consensus 629 ~~~~~~~~~vi~G~~l~-~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 629 VNPRDAKACVVHGSDLK-DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred cccccccceEEEhHHhh-hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 1244454443 567788899988875 999999999999999999999999999999999999999999999
Q ss_pred ec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHH
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 ~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~i~ 618 (885)
|| +|+|+|+++||++|++|+|++|+.++++||++|+|++|++.|.++.|+..++.++++.++ .+.|++|+|++|+|++
T Consensus 708 mg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli 787 (997)
T TIGR01106 708 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLG 787 (997)
T ss_pred cCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 99 799999999999999999999999999999999999999999999999877766665543 4568999999999999
Q ss_pred hhcc-ccccccCCCCCC---CCCCccc-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHh-hccccc-ccCc-------
Q 002743 619 NDGT-IMTISKDRVKPS---PQPDSWK-----LK-EIFATGVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGV------- 679 (885)
Q Consensus 619 ~d~~-~~~l~~d~~~~~---~~~~~~~-----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~------- 679 (885)
+|.+ ++++++|++.+. ++|.+++ .+ .++.+.+..|+++++..+++|++.+. .||... .++.
T Consensus 788 ~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 867 (997)
T TIGR01106 788 TDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDR 867 (997)
T ss_pred HHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 9985 699999887643 2232221 12 23344456688999888876665442 222111 0110
Q ss_pred --cccCCC-------------HHHHHHHHHHHHHHHHHHHHhhhccCCCC-c-ccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002743 680 --RSLRTR-------------PDEMMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN 742 (885)
Q Consensus 680 --~~~~~~-------------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~ 742 (885)
.+..+. ..+.+|++|.+++++|.++.+++|+.+.+ | ...+++++++++++.+++..++ .|.+
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p 946 (997)
T TIGR01106 868 WINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCP 946 (997)
T ss_pred cccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhh
Confidence 000000 01468999999999999999999997643 2 2245556766666665554443 3433
Q ss_pred --ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 743 --WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 743 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
-.++.+.++++.+|+++++++++.++..++.|++.|+
T Consensus 947 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 947 GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2345677888888888888998888888999987764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-116 Score=1086.67 Aligned_cols=746 Identities=27% Similarity=0.401 Sum_probs=624.3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeC
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA 81 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~ 81 (885)
+||+.++|+++++++++++ +|.++++|+++++++..++++||+++++++++|+++.+++++|+|||++++|++
T Consensus 60 ~~~~~~~L~~aa~ls~~~g-------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~ 132 (884)
T TIGR01522 60 KNPLILLLIASAVISVFMG-------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLA 132 (884)
T ss_pred hChHHHHHHHHHHHHHHHc-------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEH
Confidence 8999999999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC--------------cccccceeeeCeEEEEE
Q 002743 82 SILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVV 147 (885)
Q Consensus 82 ~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gs~v~~G~~~~~V 147 (885)
+||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|
T Consensus 133 ~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V 212 (884)
T TIGR01522 133 STLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIV 212 (884)
T ss_pred HHCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEE
Confidence 9999999999999999999999999977999999999999999999863 79999999999999999
Q ss_pred EEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchH
Q 002743 148 IATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 226 (885)
Q Consensus 148 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~ 226 (885)
++||.+|.+||+++++++. ..++++|+.++++++++....++.+++.+++.| ..+.++.+++...+++++++|||+||
T Consensus 213 ~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp 291 (884)
T TIGR01522 213 VGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLP 291 (884)
T ss_pred EEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHH
Confidence 9999999999999999876 468999999999998865443332222233333 34567888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeee-cc---cC--C-----------
Q 002743 227 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV-FA---KG--V----------- 289 (885)
Q Consensus 227 ~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~-~~---~~--~----------- 289 (885)
++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++.... .. .+ +
T Consensus 292 ~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (884)
T TIGR01522 292 IIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGD 371 (884)
T ss_pred HHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccc
Confidence 9999999999999999999999999999999999999999999999999999876421 00 00 0
Q ss_pred --------ChHHHHHHHHHHccC--------cCCChHHHHHHHhcCC--hHHHhcCCceEEeecCCCCCccEEEEEEcC-
Q 002743 290 --------EKEHVILLAARASRT--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS- 350 (885)
Q Consensus 290 --------~~~~~l~~a~~~~~~--------~~~~~~~~al~~~~~~--~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~- 350 (885)
...+++..++.|+.. ..+||+|.|++.++.. .+..+..++.++.+||+|.+|||+++++..
T Consensus 372 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 372 VLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred ccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 112445555544432 1247999999988642 223345688999999999999999988753
Q ss_pred CCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEee
Q 002743 351 DGNWHRASKGAPEQILALCNC-----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 419 (885)
Q Consensus 351 ~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i 419 (885)
+++++.++|||||.|+.+|.. +++.++++.+.+++++++|+|++++||+++ +.+|+|+|++
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli 523 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLV 523 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEE
Confidence 567899999999999999963 133456778888999999999999999975 4579999999
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 420 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 420 ~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
+++||||||++++|++|+++||+++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+++..+|||
T Consensus 524 ~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 524 GINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred eccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEE
Confidence 999999999999999999999999999999999999999999997542 2345555443 6788899999999999999
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 578 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i 578 (885)
++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++++|+|+.++.++++||++|+|+
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni 680 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNI 680 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCcc----cHHHHHHHH
Q 002743 579 KNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATG 649 (885)
Q Consensus 579 ~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~ 649 (885)
++++.|.++.|+..++.+++. .+..+.|++|+|++|+|+++|++ ++++++|++.+. ++|.++ ..+.++...
T Consensus 681 ~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~ 760 (884)
T TIGR01522 681 KNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKI 760 (884)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHH
Confidence 999999999999766665443 44567899999999999999987 589999887543 223222 224566667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHH
Q 002743 650 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATA 726 (885)
Q Consensus 650 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~ 726 (885)
++.|+++++++++.|++.+.. + ......+|++|.++++++.++.|++|+++.+++. ..+++++++
T Consensus 761 ~~~g~~~~~~~~~~~~~~~~~-------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 828 (884)
T TIGR01522 761 LVSAIIIVVGTLFVFVREMQD-------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYA 828 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHH
Confidence 788999888877666543311 1 1234567999999999999999999997654332 234466666
Q ss_pred HHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 727 FVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 727 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
+++..++..++ +|.+ -.++.+.+++|..|+.+++++++.+++.++.|+++|+
T Consensus 829 ~~~~~~~~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 829 VGGSIIGQLLV-IYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66665554333 4432 2344577888888888889999999999999987654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-116 Score=1084.77 Aligned_cols=775 Identities=27% Similarity=0.375 Sum_probs=622.8
Q ss_pred CcchHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWS 77 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~ 77 (885)
|++|+.++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||+++
T Consensus 5 f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~ 84 (917)
T TIGR01116 5 FEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWS 84 (917)
T ss_pred HhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 68999999999999999987422 223589999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-------------CcccccceeeeCeEE
Q 002743 78 EQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIE 144 (885)
Q Consensus 78 ~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gs~v~~G~~~ 144 (885)
+|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|++.
T Consensus 85 ~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~ 164 (917)
T TIGR01116 85 VIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKAR 164 (917)
T ss_pred EEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEE
Confidence 9999999999999999999999999999997899999999999999999875 789999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c----ccch----HhHHHHHH
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGIDNLL 214 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~~~~l 214 (885)
++|++||.+|++||++++++.. ++++++|+.+++++.++..++++.+++.+++.+.. . ..+| ...+..++
T Consensus 165 ~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 244 (917)
T TIGR01116 165 GVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAV 244 (917)
T ss_pred EEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH
Confidence 9999999999999999988776 57899999999998876544333222222221111 0 1122 23444667
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeec---------
Q 002743 215 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--------- 285 (885)
Q Consensus 215 ~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--------- 285 (885)
++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++....-
T Consensus 245 ~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 324 (917)
T TIGR01116 245 ALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFC 324 (917)
T ss_pred hhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEE
Confidence 88999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred --ccCCC-------------------hHHHHHHHHHHccC------------cCCChHHHHHHHhcCChH----------
Q 002743 286 --AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADPK---------- 322 (885)
Q Consensus 286 --~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~al~~~~~~~~---------- 322 (885)
..+++ .+.++..++.|+.. ..+||.|.|++.++.+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~ 404 (917)
T TIGR01116 325 VTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSS 404 (917)
T ss_pred ecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhccccc
Confidence 00000 12334445555431 125999999988753210
Q ss_pred ----------HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHH
Q 002743 323 ----------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRKKVHA 381 (885)
Q Consensus 323 ----------~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~ 381 (885)
..+..+++++.+||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++++.+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~ 483 (917)
T TIGR01116 405 KRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILS 483 (917)
T ss_pred ccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHH
Confidence 124567789999999999999999875 467889999999999999963 1345677888
Q ss_pred HHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 382 VIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 382 ~~~~~a~-~Glr~l~~a~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
++++|++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+|||+
T Consensus 484 ~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~ 563 (917)
T TIGR01116 484 VIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDN 563 (917)
T ss_pred HHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCC
Confidence 9999999 99999999999986432 144689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCC--CccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCC
Q 002743 451 LAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVND 528 (885)
Q Consensus 451 ~~tA~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~ND 528 (885)
..||.++|+++|+..+..+ ...+.|.+. ..+++++..+...+..+|||++|+||.++|+.+|+.|++|+|+|||+||
T Consensus 564 ~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND 642 (917)
T TIGR01116 564 KETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVND 642 (917)
T ss_pred HHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcch
Confidence 9999999999999653211 123444443 3566777888888889999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCC
Q 002743 529 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDF 607 (885)
Q Consensus 529 a~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~ 607 (885)
+||||+||||||||+|+++++++||+++.+|+|+.|++++++||++|+|+++++.|.+++|+..++..+++. +.++.||
T Consensus 643 ~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl 722 (917)
T TIGR01116 643 APALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGL 722 (917)
T ss_pred HHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999998777766654 4456899
Q ss_pred cHHHHHHHHHHhhcc-ccccccCCCCCC-----CC-C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccc--
Q 002743 608 SPFMVLIIAILNDGT-IMTISKDRVKPS-----PQ-P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFSDA-- 676 (885)
Q Consensus 608 ~~~~il~i~i~~d~~-~~~l~~d~~~~~-----~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-- 676 (885)
+|+|++|+|+++|.+ +++++.+++.+. |+ + ++...+..+...+..|+++++++++.|++.+.. ++....
T Consensus 723 ~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (917)
T TIGR01116 723 IPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDED 802 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Confidence 999999999999965 688888876543 11 1 122223455566777999998877665544321 221100
Q ss_pred c--Ccc---cc----CCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--
Q 002743 677 F--GVR---SL----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN-- 742 (885)
Q Consensus 677 ~--g~~---~~----~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~-- 742 (885)
. +.. +. .....+.+|+.|.++++++.++.|++|+.+.+++. ..+.|+++++++..++.. +..|.+
T Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~-~~~~v~~~ 881 (917)
T TIGR01116 803 SFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF-LILYVPFL 881 (917)
T ss_pred ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH-HHHHhHHH
Confidence 0 000 00 00124567999999999999999999997644332 234466666666655543 334443
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhH
Q 002743 743 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 778 (885)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 778 (885)
-.++++.+++|..|+++++++++.++..++.|+++|
T Consensus 882 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 882 SRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 234567788999999889999999999999997753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-117 Score=996.52 Aligned_cols=763 Identities=23% Similarity=0.336 Sum_probs=603.6
Q ss_pred cchHHHHHHHHHHHHHHHhcCCC-CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh-cCCCceEEEeCCeEEEE
Q 002743 2 WNPLSWVMEAAAIMAIALANGGG-RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQ 79 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~-~~~~~~~V~rdg~~~~i 79 (885)
.+.-.++|++||++|+.++.+.. -++.|+|++.|++.+++-.++..+.+|+.++....|.+ ....+..|+|||+.++|
T Consensus 154 qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~i 233 (1034)
T KOG0204|consen 154 QDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQI 233 (1034)
T ss_pred ccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEE
Confidence 45667899999999999986543 35689999988765554444455555555555555543 33567899999999999
Q ss_pred eCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--CCcccccceeeeCeEEEEEEEeccchhhh
Q 002743 80 DASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFG 157 (885)
Q Consensus 80 ~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--~~~v~~Gs~v~~G~~~~~V~~tG~~T~~g 157 (885)
+..|||||||+.|+.||.|||||++++|+++.||||++||||.++.|.+ +.++++||++.+|.++++|+++|.+|+.|
T Consensus 234 sI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG 313 (1034)
T KOG0204|consen 234 SIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWG 313 (1034)
T ss_pred EEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHh
Confidence 9999999999999999999999999999999999999999999999987 45899999999999999999999999999
Q ss_pred hHhhhhhccC-CCCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcc-----cc---ch----Hh----HHHHHHHHH
Q 002743 158 KAAHLVDSTN-QVGHFQKVLTAIGNFCI---CSIAVGIVAEIIIMYPVQ-----HR---KY----RD----GIDNLLVLL 217 (885)
Q Consensus 158 ki~~l~~~~~-~~~~~~~~~~~i~~~~~---~~i~~~~~~~~~~~~~~~-----~~---~~----~~----~~~~~l~ll 217 (885)
++..++.... +++|+|-.+++++..+. +.++...+++++..|+.. +. .+ .. .|...+.++
T Consensus 314 ~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTil 393 (1034)
T KOG0204|consen 314 IIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTIL 393 (1034)
T ss_pred hHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEE
Confidence 9999988775 89999999988776532 222222222223333321 11 11 12 233334567
Q ss_pred HHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC--------C
Q 002743 218 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------V 289 (885)
Q Consensus 218 v~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~--------~ 289 (885)
++++|++||+++++++++++++|.+++.+||.++|+|+||+.++||+|||||||.|+|+|.+.++..-.+. .
T Consensus 394 VVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l 473 (1034)
T KOG0204|consen 394 VVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNL 473 (1034)
T ss_pred EEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999776422111 1
Q ss_pred ChH--HHHHHH-HHHcc-------------CcCCChHHHHHHHhc----CChHHHhcCCceEEeecCCCCCccEEEEEEc
Q 002743 290 EKE--HVILLA-ARASR-------------TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYID 349 (885)
Q Consensus 290 ~~~--~~l~~a-~~~~~-------------~~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~ 349 (885)
+++ +++..+ +..+. ...++|.|.|++++. .+.++.+.+.+.++++||||.+|+|+++++.
T Consensus 474 ~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 474 PPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred CHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEc
Confidence 111 111111 11111 012589999998875 4667778888999999999999999999998
Q ss_pred CCCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-------C-CCCCC
Q 002743 350 SDGNWHRASKGAPEQILALCNC-----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPG 410 (885)
Q Consensus 350 ~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~-------~-~~~~e 410 (885)
++|..+.++|||.|.+++.|+. +++.+..+.+.++.||++|||++|+||++..+. + .+.++
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 8877349999999999999974 344566888999999999999999999984332 1 24568
Q ss_pred CCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHH
Q 002743 411 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 490 (885)
Q Consensus 411 ~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (885)
.+++++|+++++||.|||++++|+.|++|||+|.|+||||..||++||++|||.++..+...+.|.+.. .+++++.+++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i 712 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKI 712 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhh
Confidence 899999999999999999999999999999999999999999999999999998765544555555554 7889999999
Q ss_pred HHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 491 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 491 ~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.++.+|+||.+|.||+-+|+.|+++||+||+||||.||+||||+||||.||| .||++|||+|||+|+||||++|+.+++
T Consensus 713 ~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~ 792 (1034)
T KOG0204|consen 713 WPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVK 792 (1034)
T ss_pred hhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC-------CCCCcc
Q 002743 570 TSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-------PQPDSW 640 (885)
Q Consensus 570 ~gR~~~~~i~~~i~~~~~~ni-~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~-------~~~~~~ 640 (885)
|||..|.||+||++|.+..|+ ++++.+..+...-..|++++|+||+|+++|-+ +++|++|++.+. -+..+.
T Consensus 793 WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~L 872 (1034)
T KOG0204|consen 793 WGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPL 872 (1034)
T ss_pred hhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcc
Confidence 999999999999999999998 55556666666677999999999999999987 799999987543 233455
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC---CC--
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRS---WS-- 714 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~---~~-- 714 (885)
..+.+|+..+.+++|+.++.+.+.+.... + |+... .+....+..|++|-+++++|.++-|+.|.-. .|
T Consensus 873 It~tMwknil~qa~YQl~vl~iL~F~G~~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkg 946 (1034)
T KOG0204|consen 873 ITRTMWKNILGQAVYQLIVLFILNFAGKS--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKG 946 (1034)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcchh--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHH
Confidence 56778888899999999888866554432 2 22211 1113445669999999999999999999854 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 002743 715 FIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILK 774 (885)
Q Consensus 715 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 774 (885)
.++|+ ++++++...++..++.+..-..++.+.+++|..|+++..+.+..++.-.+.|
T Consensus 947 i~~N~---~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik 1003 (1034)
T KOG0204|consen 947 IFRNR---LFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLK 1003 (1034)
T ss_pred HhcCc---eEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHhe
Confidence 12233 3333333333333333322234466788888888777777766665555554
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-105 Score=1003.72 Aligned_cols=718 Identities=21% Similarity=0.261 Sum_probs=561.4
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.+++++++++++..+ +|.++++|+++++++..++++|++++.++++++.. .++.++|+|||+|++|+
T Consensus 172 ~~~p~~i~~i~~~~l~~~~~-------~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~ 243 (1054)
T TIGR01657 172 VLHPFYVFQVFSVILWLLDE-------YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIA 243 (1054)
T ss_pred HhchHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEE
Confidence 57999999999877776653 89999999999999999999999999998888654 56789999999999999
Q ss_pred CCCCCCCcEEEEc--CCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC------------------Ccccccceeee
Q 002743 81 ASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------------------DEVFSGSTCKQ 140 (885)
Q Consensus 81 ~~~Lv~GDiv~l~--~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~------------------~~v~~Gs~v~~ 140 (885)
++||||||+|.|+ +||.|||||+|++| ++.||||+|||||.|+.|.+. +++|+||.+.+
T Consensus 244 s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~ 322 (1054)
T TIGR01657 244 SDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQ 322 (1054)
T ss_pred cccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEE
Confidence 9999999999999 99999999999999 699999999999999999762 25999999985
Q ss_pred -------CeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHH
Q 002743 141 -------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 212 (885)
Q Consensus 141 -------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (885)
|.+.++|++||.+|..|++.+.+... +..+++++...++..++.++.+++.+. +++.....+.++...+..
T Consensus 323 ~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~ 401 (1054)
T TIGR01657 323 IRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY-TIIELIKDGRPLGKIILR 401 (1054)
T ss_pred EecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHH
Confidence 78999999999999999999988765 466788888877765543332222221 111222335678889999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC----
Q 002743 213 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG---- 288 (885)
Q Consensus 213 ~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~---- 288 (885)
++.+++++||++||++++++++.++.||+++|++||+++++|.+|++|++|||||||||+|+|+|.++........
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~ 481 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI 481 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998764211000
Q ss_pred ------CChHHHHHHHHHHcc------CcCCChHHHHHHHhcCCh----HH--H-------------hcCCceEEeecCC
Q 002743 289 ------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP----KE--A-------------RAGVREVHFLPFN 337 (885)
Q Consensus 289 ------~~~~~~l~~a~~~~~------~~~~~~~~~al~~~~~~~----~~--~-------------~~~~~~l~~~pf~ 337 (885)
.....+....+.|+. ...+||+|.|++++.+.. .+ . ...+++++.+||+
T Consensus 482 ~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 561 (1054)
T TIGR01657 482 VTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFS 561 (1054)
T ss_pred cccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeec
Confidence 011222333333322 123699999999976311 00 0 1457788999999
Q ss_pred CCCccEEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCC
Q 002743 338 PVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKES 408 (885)
Q Consensus 338 s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~--------~~~~ 408 (885)
|.+|||+++++..+ ++++.++|||||.|+++|+. +..++++.+.+++|+++|+||+++|||++++. ++++
T Consensus 562 S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~ 640 (1054)
T TIGR01657 562 SALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640 (1054)
T ss_pred CCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHH
Confidence 99999999998654 56789999999999999984 34567888899999999999999999998742 2356
Q ss_pred CCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------
Q 002743 409 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------ 470 (885)
Q Consensus 409 ~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~------------------ 470 (885)
.|++|+|+|+++|+||+|||++++|++|+++||+++|+||||+.||.++|+++||..+....
T Consensus 641 ~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~ 720 (1054)
T TIGR01657 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKF 720 (1054)
T ss_pred HhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEE
Confidence 78999999999999999999999999999999999999999999999999999996432100
Q ss_pred ---------------------------------ccccCcccc--cccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhc
Q 002743 471 ---------------------------------SSLLGQDKD--ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER 515 (885)
Q Consensus 471 ---------------------------------~~~~~~~~~--~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~ 515 (885)
.+++|...+ ..+.++++.+++++..||||++|+||.++|+.||+.
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~ 800 (1054)
T TIGR01657 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL 800 (1054)
T ss_pred EecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC
Confidence 001111110 012345677788889999999999999999999999
Q ss_pred CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 516 KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 516 g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++|++++.+|++||++|.++++.+.|.+.+++..++.
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999865 455 7999999999999999999999999999999999999988866554
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002743 596 FMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT 670 (885)
Q Consensus 596 ~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 670 (885)
+++ ....+.+|+++|++|++++.+.+ .++++.+++.+. .+| .+...+..+...+.++++..+..+..|++....
T Consensus 879 ~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~ 957 (1054)
T TIGR01657 879 VSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQ 957 (1054)
T ss_pred HHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 433 33456889999999999999987 588888776543 223 333334455556667778877777777666655
Q ss_pred cccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc--hhHHHHHHHHHHHHH
Q 002743 671 DFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER--PGLLLATAFVIAQLV 733 (885)
Q Consensus 671 ~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~--~~~~l~~~~~~~~~~ 733 (885)
+|+........ -........|++| .++.++++..+..++.+..|... .+.++++++++..++
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 958 PWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGL 1022 (1054)
T ss_pred CCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHH
Confidence 55421111000 0001223467778 66677777778888766443221 233555555544333
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-107 Score=918.19 Aligned_cols=778 Identities=23% Similarity=0.384 Sum_probs=635.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcC-----CCCCCChhh-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG-----GGRDPDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~-----~~~~~~~~~-~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg 74 (885)
+.|-+.++||++++++++.... ..++.+... +.++..++++..+..|+||.+..+-+++++++.|..+.|+|||
T Consensus 92 ~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg 171 (1019)
T KOG0203|consen 92 LFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDG 171 (1019)
T ss_pred HhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecc
Confidence 3577889999999999885421 112233333 3445566778889999999999999999999999999999999
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC----------CcccccceeeeCeEE
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gs~v~~G~~~ 144 (885)
+...+.+++|||||+|.++-||+||||.|++++..+++|+|+|||||.|..+++. |+.|.+|.+.+|.++
T Consensus 172 ~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~ 251 (1019)
T KOG0203|consen 172 EKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGR 251 (1019)
T ss_pred eeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEE
Confidence 9999999999999999999999999999999999999999999999999998763 678999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCC
Q 002743 145 AVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 223 (885)
++|++||.+|.+|+|+.+... ...++++++.++++..+......+ +.+.++..-...++.|..++.+++.++++.+|+
T Consensus 252 givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPe 330 (1019)
T KOG0203|consen 252 GIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPE 330 (1019)
T ss_pred EEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcC
Confidence 999999999999999998766 468889999998887664332222 222223222333778889988899999999999
Q ss_pred chHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeeccc----------------
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK---------------- 287 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~---------------- 287 (885)
+|+.+++++++..++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+.+..-.
T Consensus 331 GL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~ 410 (1019)
T KOG0203|consen 331 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKS 410 (1019)
T ss_pred CccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999876531100
Q ss_pred CCChHHHHHHHHHHccC---------------cCCChHHHHHHHhc----CChHHHhcCCceEEeecCCCCCccEEEEEE
Q 002743 288 GVEKEHVILLAARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 288 ~~~~~~~l~~a~~~~~~---------------~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~ 348 (885)
...-..+.+.+..|++. ..+|+.+.|+++++ .+..+.++..+.+..+||||.+|+.-.+..
T Consensus 411 ~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~ 490 (1019)
T KOG0203|consen 411 SATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHE 490 (1019)
T ss_pred CchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEe
Confidence 01113456666666542 14688999999876 355677888999999999999999987776
Q ss_pred cCC---CcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---------
Q 002743 349 DSD---GNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~~---g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
..| .+..+..|||||.++++|+. ++...+.+++...++...|-|+++++++.+++++.
T Consensus 491 ~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d 570 (1019)
T KOG0203|consen 491 TEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD 570 (1019)
T ss_pred cCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC
Confidence 544 57789999999999999973 45667888888999999999999999999886532
Q ss_pred --CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~--------------- 469 (885)
..+..+|.|+|++++.||||..+|+++.+||.+||||+|+||||+-||+++|+++||..+...
T Consensus 571 ~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~ 650 (1019)
T KOG0203|consen 571 DVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQ 650 (1019)
T ss_pred CCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccc
Confidence 234578999999999999999999999999999999999999999999999999997542110
Q ss_pred -------CccccCcccccccCcchHHHHHHhcC--eEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
..++.|.++. .++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+||||||
T Consensus 651 vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 651 VNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred cCccccceEEEeccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 0123344433 788899999998765 999999999999999999999999999999999999999999999
Q ss_pred ec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHH
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 ~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~i~ 618 (885)
|| .|+|++|+|||++|+||||++|+..|++||-+|+|+||.+.|.+++|+..+..+++ +.+..|+|+.++.+|+|.+.
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99 99999999999999999999999999999999999999999999999977766655 45568899999999999999
Q ss_pred hhcc-ccccccCCCCC------CC--CCCcccHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhhccccccc----------
Q 002743 619 NDGT-IMTISKDRVKP------SP--QPDSWKLKEIFAT-GVVLGSYLAIMTVVFFW-LMRKTDFFSDAF---------- 677 (885)
Q Consensus 619 ~d~~-~~~l~~d~~~~------~~--~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~---------- 677 (885)
+|.. +++++||.++. ++ +.++.-..+++.+ .+..|+++++..|+.|+ ++...||++...
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~ 889 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDD 889 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhh
Confidence 9987 69999998642 22 2233333455544 46679999999996655 445567776431
Q ss_pred CccccCCCHH-------------HHHHHHHHHHHHHHHHHHhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002743 678 GVRSLRTRPD-------------EMMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN 742 (885)
Q Consensus 678 g~~~~~~~~~-------------~~~t~~f~~~~~~~~~~~~~~rs~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 742 (885)
+++++.+++. +++|+.|.++++.|.+..+.+.+|+-+ -....|+.+++++++-.+++.++++-..
T Consensus 890 ~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg 969 (1019)
T KOG0203|consen 890 GVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPG 969 (1019)
T ss_pred hhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCcc
Confidence 1222222222 256889999999999988888777644 3456777888898888777766643321
Q ss_pred -ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002743 743 -WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 743 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
.....+.++.|.||++.+.++++.++.+|+.|++.|++
T Consensus 970 ~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 970 VLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred HHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 12345788899999999999999999999999998864
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-98 Score=936.10 Aligned_cols=765 Identities=18% Similarity=0.230 Sum_probs=558.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC-CeEEEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQ 79 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd-g~~~~i 79 (885)
|..|..+++++.+++.++..... ...+...+.++++++++.+.+++|+++++++.+++ ++++++|+|| |+++++
T Consensus 25 f~~~~N~yfl~i~ilq~ip~~s~--~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~---n~~~~~v~~~~~~~~~i 99 (1057)
T TIGR01652 25 FKRFANLYFLVVALLQQVPILSP--TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEV---NNRLTEVLEGHGQFVEI 99 (1057)
T ss_pred HHHHhhHHHHHHHHHHcCCCcCC--CCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHH---hCcEEEEECCCCcEEEe
Confidence 45678889999999988843111 11233455666777789999999999999988654 4588999997 899999
Q ss_pred eCCCCCCCcEEEEcCCCeeeceEEEEeeCC----eEEEeccccCCCCccccCCC--------------------------
Q 002743 80 DASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-------------------------- 129 (885)
Q Consensus 80 ~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-------------------------- 129 (885)
+|+||+|||+|.|++||.||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 100 ~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~ 179 (1057)
T TIGR01652 100 PWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNA 179 (1057)
T ss_pred eeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCC
Confidence 999999999999999999999999998544 99999999999999988631
Q ss_pred ----------------------Ccccccceeee-CeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHH
Q 002743 130 ----------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 130 ----------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~ 186 (885)
|.+++||.+++ |.+.|+|++||.+|++++... ....+.+++++.++++..+++++
T Consensus 180 ~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~--~~~~k~s~le~~ln~~~~~l~~~ 257 (1057)
T TIGR01652 180 SLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT--QAPSKRSRLEKELNFLIIILFCL 257 (1057)
T ss_pred cceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC--CCcccccHHHHHHhhHHHHHHHH
Confidence 46899999999 899999999999998876421 22347799999999998775544
Q ss_pred HHHHHHHHHHHHhhccc----cch---------------HhHHHHHHHHHHHHcCCchHHHHHHHHHHHH------HHhh
Q 002743 187 IAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS------HRLS 241 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~------~~l~ 241 (885)
.++.+++..++...... ..| ...+..++.++..++|++||+++++++.+++ .+|.
T Consensus 258 ~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~ 337 (1057)
T TIGR01652 258 LFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMY 337 (1057)
T ss_pred HHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhh
Confidence 33322222222211111 011 1256778899999999999999999999999 7887
Q ss_pred cC----CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCC----------------------------
Q 002743 242 QQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---------------------------- 289 (885)
Q Consensus 242 ~~----~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~---------------------------- 289 (885)
++ ++++|+++++|+||++++||+|||||||+|+|+++++.+....++.
T Consensus 338 ~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1057)
T TIGR01652 338 HEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESK 417 (1057)
T ss_pred ccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhccccccccccccccccc
Confidence 64 5999999999999999999999999999999999998763211000
Q ss_pred -----C----------------hHHHHHHHHHHccC-------c-------CCChHHHHHHHhcCCh---------H---
Q 002743 290 -----E----------------KEHVILLAARASRT-------E-------NQDAIDAAIVGMLADP---------K--- 322 (885)
Q Consensus 290 -----~----------------~~~~l~~a~~~~~~-------~-------~~~~~~~al~~~~~~~---------~--- 322 (885)
+ ..+.+..++.|+.. . .++|.|.|++.++... +
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~ 497 (1057)
T TIGR01652 418 GFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSIS 497 (1057)
T ss_pred ccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceE
Confidence 0 01223333333321 1 2589999999876321 0
Q ss_pred ------HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEE
Q 002743 323 ------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLG 395 (885)
Q Consensus 323 ------~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~ 395 (885)
.....|++++.+||+|.||||++++++++|++++++|||||.|+++|.. +++.++++.+++++|+++|+||++
T Consensus 498 ~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~ 577 (1057)
T TIGR01652 498 LLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLC 577 (1057)
T ss_pred EEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEE
Confidence 0124588899999999999999999988888899999999999999985 345677888999999999999999
Q ss_pred EEeeecCCCCC-------------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 396 VARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 396 ~a~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
+|+|.+++++. +.+|++|+|+|+++++||||+|++++|++|+++||++||+|||+
T Consensus 578 ~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~ 657 (1057)
T TIGR01652 578 IAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDK 657 (1057)
T ss_pred EEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCc
Confidence 99999876421 34689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCc---------------------------------------cccCcccccccCc---chHH
Q 002743 451 LAIGKETGRRLGMGTNMYPSS---------------------------------------SLLGQDKDASIAA---LPVD 488 (885)
Q Consensus 451 ~~tA~~ia~~lGi~~~~~~~~---------------------------------------~~~~~~~~~~~~~---~~~~ 488 (885)
++||.+||++|||.++..... ++.|...+..+++ +.+.
T Consensus 658 ~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~ 737 (1057)
T TIGR01652 658 VETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737 (1057)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHH
Confidence 999999999999975422100 1222222111111 1234
Q ss_pred HHHHhcC--eEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhccCEEEcCCCcch
Q 002743 489 ELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 489 ~~~~~~~--v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~aADivl~~~~~~~ 563 (885)
+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++ | +|. .|+.+||+++.+ |..
T Consensus 738 ~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~-qA~~aaD~~i~~--F~~ 814 (1057)
T TIGR01652 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM-QAVMASDFAIGQ--FRF 814 (1057)
T ss_pred HHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHH-HHHHhhhhhhhh--HHH
Confidence 4555555 99999999999999999998 99999999999999999999999998 4 333 466799999975 899
Q ss_pred HHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcHHHHHHHHHHhhcc-cccccc-CCCCC---
Q 002743 564 IISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLIIAILNDGT-IMTISK-DRVKP--- 633 (885)
Q Consensus 564 i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~----~~~~~~il~i~i~~d~~-~~~l~~-d~~~~--- 633 (885)
+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|+|++.+.+ +++++. |+..+
T Consensus 815 L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~ 894 (1057)
T TIGR01652 815 LTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASL 894 (1057)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHH
Confidence 99887 8999999999999999999999888877776665333 57888999999999876 567753 33211
Q ss_pred ---CC-------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHH
Q 002743 634 ---SP-------QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQA 703 (885)
Q Consensus 634 ---~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~ 703 (885)
.| +...++.+.++ ..++.|++++++++++.++.+...... ..| ...+.....+.+|+.+++..++
T Consensus 895 l~~~P~ly~~~~~~~~~~~~~f~-~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~~~~~~ 969 (1057)
T TIGR01652 895 SLRYPQLYREGQKGQGFSTKTFW-GWMLDGIYQSLVIFFFPMFAYILGDFV-SSG---SLDDFSSVGVIVFTALVVIVNL 969 (1057)
T ss_pred HHhChHHHHHhhhcCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---cccchhhHHHHHHHHHHHHHHH
Confidence 11 11223444444 445679999988876555444321111 111 1123455667788888777777
Q ss_pred HHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 704 LIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYA-N---WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 704 ~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
.++ ..++.|+|......|. ++++..++..++..+. . ++.......++.+|+.+++..++.++++-++|.+++.
T Consensus 970 ~~~-~~~~~wt~~~~~~~~~--S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~ 1046 (1057)
T TIGR01652 970 KIA-LEINRWNWISLITIWG--SILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRL 1046 (1057)
T ss_pred HHH-HHHhHhHHHHHHHHHH--HHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 3444565543332222 2221111111111110 0 0001111123456666677777888898899988777
Q ss_pred hcCc
Q 002743 780 ILSG 783 (885)
Q Consensus 780 ~~~~ 783 (885)
+.|+
T Consensus 1047 ~~P~ 1050 (1057)
T TIGR01652 1047 FRPP 1050 (1057)
T ss_pred cCCC
Confidence 7653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-98 Score=875.90 Aligned_cols=543 Identities=23% Similarity=0.363 Sum_probs=453.1
Q ss_pred CcchHHHHHHHHHHHHHHHhcC-C-CCCCCh--hhHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHhcCCC-ceE-E
Q 002743 1 MWNPLSWVMEAAAIMAIALANG-G-GRDPDW--QDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK-V 70 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~-~-~~~~~~--~~~~~i~~~~~~~~~i~~~~----e~~a~~~~~~l~~~~~~-~~~-V 70 (885)
||||+.|+++++++++++++.. . .....| .+.+.|.+++++|.+++.++ |+|+++++++|+++.++ +++ |
T Consensus 30 ~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v 109 (673)
T PRK14010 30 IKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRI 109 (673)
T ss_pred HHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 6899999999999999998731 1 000112 44777888888888888887 68999999999998887 776 7
Q ss_pred EeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---CcccccceeeeCeEEEEE
Q 002743 71 LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAVV 147 (885)
Q Consensus 71 ~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~~V 147 (885)
.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.++|
T Consensus 110 ~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~V 188 (673)
T PRK14010 110 KQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188 (673)
T ss_pred EeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEE
Confidence 8999999999999999999999999999999999999 579999999999999999999 889999999999999999
Q ss_pred EEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHhHHHHHHHHHHHHcCCch
Q 002743 148 IATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 148 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~aL 225 (885)
+++|.+|++||++++++++ ++++|+|.....+...+.+++ +++ ++..+.. ...++...+...+++++++|||+|
T Consensus 189 ta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~---l~~-~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 189 TSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF---LVV-ILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH---HHH-HHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 9999999999999999887 478898876655433222111 111 1111111 112344567778888899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
|..++++.+.|+.+|+|+|+++|+++++|+||++|+||||||||||+|++.+.+... ..+.+.++++..++.++...
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~s 341 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIAD 341 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999998777666431 23455566777776666544
Q ss_pred CCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVID 384 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~~~ 384 (885)
.||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+++.++++|.... ..+.++.+..+
T Consensus 342 -~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~ 414 (673)
T PRK14010 342 -DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVK 414 (673)
T ss_pred -CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHH
Confidence 49999999987642110 00112245689999999999864 343 566999999999997421 22334666778
Q ss_pred HHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 385 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 385 ~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
+++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||.
T Consensus 415 ~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 415 GVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred HHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 89999999999864 34899999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccc
Q 002743 465 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 544 (885)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~ 544 (885)
++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+|
T Consensus 482 ------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsG 531 (673)
T PRK14010 482 ------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSG 531 (673)
T ss_pred ------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCC
Confidence 26999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 545 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 601 (885)
Q Consensus 545 td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 601 (885)
||+||++||+||++|||++|++++++||++|.|+++++.|.++.|++.++..+...|
T Consensus 532 TdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 532 TMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987666554433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-94 Score=841.65 Aligned_cols=534 Identities=24% Similarity=0.327 Sum_probs=450.3
Q ss_pred CcchHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-ceEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGG----GR---DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKVLR 72 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~----~~---~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~-~~~V~r 72 (885)
|+||+.++++++++++++++... +. ...|...+.+++.+++..+++.++|+|+++++++|+++.+. +++|+|
T Consensus 31 ~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir 110 (679)
T PRK01122 31 IRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLR 110 (679)
T ss_pred hhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 68999999999999999987311 11 12344445555566667777889999999999999998875 799999
Q ss_pred CCe-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc---ccccceeeeCeEEEEEE
Q 002743 73 DGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAVVI 148 (885)
Q Consensus 73 dg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~~~V~ 148 (885)
||+ +++|++++|+|||+|.+++||.|||||++++| .+.||||+|||||.|+.|++|+. +|+||.|.+|++.++|+
T Consensus 111 ~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vt 189 (679)
T PRK01122 111 EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRIT 189 (679)
T ss_pred CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEE
Confidence 988 99999999999999999999999999999999 58999999999999999999988 99999999999999999
Q ss_pred EeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHH
Q 002743 149 ATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 227 (885)
Q Consensus 149 ~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~ 227 (885)
++|.+|++||+.++++++ .+++|+|..++.+...+...+++.++..+.+.++ .+.. .++...+++++++|||+|+.
T Consensus 190 a~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 190 ANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred EecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchhhh
Confidence 999999999999999887 4788999877776555433222222222222221 1222 37888899999999999999
Q ss_pred HHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCC
Q 002743 228 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQ 307 (885)
Q Consensus 228 ~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 307 (885)
.++++...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++...+
T Consensus 267 l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~- 342 (679)
T PRK01122 267 LLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADE- 342 (679)
T ss_pred HHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCC-
Confidence 9999999999999999999999999999999999999999999999999988652 235667778888777776554
Q ss_pred ChHHHHHHHhcCCh---HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHHH
Q 002743 308 DAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 383 (885)
Q Consensus 308 ~~~~~al~~~~~~~---~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~~ 383 (885)
||.+.|+++++... ......++..+++||++.++++++.+ +| ..++||++|.+++.|+.. ...++++++.+
T Consensus 343 hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~ 417 (679)
T PRK01122 343 TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAV 417 (679)
T ss_pred CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHH
Confidence 89999999876431 11111245678899999988777643 34 578999999999999642 23456778888
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 002743 384 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 463 (885)
Q Consensus 384 ~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi 463 (885)
++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 418 ~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 418 DEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred HHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 9999999999999974 489999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEecc
Q 002743 464 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 543 (885)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~ 543 (885)
+ ++|||++||||+++|+.+|++|++|+|+|||+||+|||++||||||||+
T Consensus 485 d------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 534 (679)
T PRK01122 485 D------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 534 (679)
T ss_pred c------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 4 2699999999999999999999999999999999999999999999999
Q ss_pred chHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 002743 544 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 590 (885)
Q Consensus 544 ~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni 590 (885)
|||+||++||+|+++|||+.|++++++||++.-.--....|.+..-+
T Consensus 535 GTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 535 GTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999998444445556555444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=887.76 Aligned_cols=759 Identities=16% Similarity=0.162 Sum_probs=534.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCC
Q 002743 6 SWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 85 (885)
Q Consensus 6 ~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv 85 (885)
.+..++.+++.++-.. .....+...+.+++++++.++.+.+++++++++..+. ++.+++|+|+|++++++|++|+
T Consensus 116 N~YFL~I~ilq~ip~~--s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~---N~~~~~v~~~~~~~~i~~~~i~ 190 (1178)
T PLN03190 116 YIYFLVIAVLNQLPQL--AVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIE---NNRLAWVLVDDQFQEKKWKDIR 190 (1178)
T ss_pred hHHHHHHHHHHhCCCc--ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh---cCcEEEEEECCeEEEEeHHHCC
Confidence 3444555566554221 1112455677888889999999999999999987764 4578999999999999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCCC--------------------------------
Q 002743 86 PGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY-------------------------------- 129 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~-------------------------------- 129 (885)
|||+|+|++||.||||++|++++ .|+||||+|||||+|+.|.++
T Consensus 191 vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~ 270 (1178)
T PLN03190 191 VGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQAN 270 (1178)
T ss_pred CCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEE
Confidence 99999999999999999999843 499999999999999999643
Q ss_pred -------------CcccccceeeeC-eEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 130 -------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEI 195 (885)
Q Consensus 130 -------------~~v~~Gs~v~~G-~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 195 (885)
+.+++||.++++ .+.|+|++||.+|+...- ......+.+++++.+|++..+++++.++.+++..
T Consensus 271 i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N--~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~ 348 (1178)
T PLN03190 271 MEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLN--NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVS 348 (1178)
T ss_pred EEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhc--CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 346677777776 499999999999974221 1111247899999999988765444333222222
Q ss_pred HH--Hhhccc-c---------------------ch-------HhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCC
Q 002743 196 II--MYPVQH-R---------------------KY-------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 244 (885)
Q Consensus 196 ~~--~~~~~~-~---------------------~~-------~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ 244 (885)
++ .|.... . ++ ...+...++++...||++|++++++++..++..+.++.
T Consensus 349 i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~ 428 (1178)
T PLN03190 349 VCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDD 428 (1178)
T ss_pred HHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhh
Confidence 22 121100 0 00 11123345677799999999999999988888887654
Q ss_pred ----------ceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC--------------------------
Q 002743 245 ----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-------------------------- 288 (885)
Q Consensus 245 ----------ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------------------------- 288 (885)
+.+|+.+.+|+||+|++||+|||||||+|+|+++++.+.+..++
T Consensus 429 ~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (1178)
T PLN03190 429 QMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKM 508 (1178)
T ss_pred hcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccc
Confidence 78999999999999999999999999999999999987321110
Q ss_pred ---------------CC-h-----HHHHHHHHHHccC------------------cCCChHHHHHHHhcCC---------
Q 002743 289 ---------------VE-K-----EHVILLAARASRT------------------ENQDAIDAAIVGMLAD--------- 320 (885)
Q Consensus 289 ---------------~~-~-----~~~l~~a~~~~~~------------------~~~~~~~~al~~~~~~--------- 320 (885)
.+ + .+.+...+.|+.. ...+|.|.|++.++.+
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~ 588 (1178)
T PLN03190 509 KVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERT 588 (1178)
T ss_pred cccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEeccc
Confidence 00 0 1123333333211 1137999999988742
Q ss_pred -------hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC--hHHHHHHHHHHHHHHHcCC
Q 002743 321 -------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR--EDVRKKVHAVIDKFAERGL 391 (885)
Q Consensus 321 -------~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~--~~~~~~~~~~~~~~a~~Gl 391 (885)
....+..|++++.+||+|.|||||+++++++|++.+++|||||.|+++|+.. +..++++.+++++|+++|+
T Consensus 589 ~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~Gl 668 (1178)
T PLN03190 589 SGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGL 668 (1178)
T ss_pred CCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCC
Confidence 1224567899999999999999999999888889999999999999999743 4567788899999999999
Q ss_pred eEEEEEeeecCCCCC-------------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEE
Q 002743 392 RSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 446 (885)
Q Consensus 392 r~l~~a~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~ml 446 (885)
|||++|||.++++++ +.+|+||+++|+++++||||+|++++|++|+++||++||+
T Consensus 669 RtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ml 748 (1178)
T PLN03190 669 RTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVL 748 (1178)
T ss_pred ceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 999999999975421 3468999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCCCccc-----------------------------------------------cCcccc
Q 002743 447 TGDQLAIGKETGRRLGMGTNMYPSSSL-----------------------------------------------LGQDKD 479 (885)
Q Consensus 447 TGD~~~tA~~ia~~lGi~~~~~~~~~~-----------------------------------------------~~~~~~ 479 (885)
|||+.+||++||++|||.++......+ .|....
T Consensus 749 TGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~ 828 (1178)
T PLN03190 749 TGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLV 828 (1178)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHH
Confidence 999999999999999997543211111 111111
Q ss_pred cccC---cchHHHHHHhcC--eEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhc
Q 002743 480 ASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSA 551 (885)
Q Consensus 480 ~~~~---~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~a 551 (885)
...+ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+|+|||+||+||||+|||||++ | +|.+|++ |
T Consensus 829 ~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~-a 907 (1178)
T PLN03190 829 YVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVM-A 907 (1178)
T ss_pred HHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHH-h
Confidence 0001 123445555665 79999999999999999997 68999999999999999999999998 5 5666665 9
Q ss_pred cCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CcHHHHHHHHHHhh-cccccc
Q 002743 552 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLIIAILND-GTIMTI 626 (885)
Q Consensus 552 ADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~----~~~~~il~i~i~~d-~~~~~l 626 (885)
||+++.++++...+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.++.+|. +.++.+.++|++.. .+++.+
T Consensus 908 SDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~ 986 (1178)
T PLN03190 908 SDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVV 986 (1178)
T ss_pred hccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999887776666555 9999999999999999999999999988887775553 33444444444443 333443
Q ss_pred -ccCCCCC-------------CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHH
Q 002743 627 -SKDRVKP-------------SPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAA 692 (885)
Q Consensus 627 -~~d~~~~-------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 692 (885)
.+|+..+ .++...++.+.++. +++.|++++++.|++.++.+.... .+. ....+.
T Consensus 987 ~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~-w~~~~i~qs~iiff~~~~~~~~~~----~~~-------~~~~~~ 1054 (1178)
T PLN03190 987 GILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWL-TMIDTLWQSAVVFFVPLFAYWAST----IDG-------SSIGDL 1054 (1178)
T ss_pred HHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCC----cCc-------eeEhHh
Confidence 2333211 12233445555444 466699999988866555443211 110 112244
Q ss_pred HHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHh---hc-ccccccccchhhHHHHHHHHHHHHHH
Q 002743 693 LYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY---AN-WSFARIEGCGWGWAGVIWLYSLVTYF 768 (885)
Q Consensus 693 ~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (885)
+++.++++.++.++ ..+++|.|......|. ++++..++..++... .. +.+..+ ...+.+|+.+++..++.++
T Consensus 1055 ~~~~~v~~vnl~i~-~~~~~wt~~~~~~i~~--Si~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~ 1130 (1178)
T PLN03190 1055 WTLAVVILVNLHLA-MDIIRWNWITHAAIWG--SIVATFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALL 1130 (1178)
T ss_pred hhhHHHHHHHHHHH-HHHhhhhHHHHHHHHH--HHHHHHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence 45555555555433 4444566554443322 222221111111100 00 111111 1234566676778888888
Q ss_pred HHHHHHHHhHHhcCcchhhhhh
Q 002743 769 PLDILKFGIRYILSGKAWDTLL 790 (885)
Q Consensus 769 ~~~~~k~~~r~~~~~~~~~~~~ 790 (885)
++-++|++.|.++|.. .+...
T Consensus 1131 p~~~~~~~~~~~~P~~-~~~~~ 1151 (1178)
T PLN03190 1131 PRFVVKVLYQYFTPCD-VQIAR 1151 (1178)
T ss_pred HHHHHHHHHHHcCCCH-HHHHH
Confidence 9899999888777644 44433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=802.20 Aligned_cols=538 Identities=23% Similarity=0.328 Sum_probs=452.8
Q ss_pred CcchHHHHHHHHHHHHHHHhcC----C--CCCCChhhH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCc-eEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKV 70 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~----~--~~~~~~~~~---~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V 70 (885)
|.||+.++++++++++++++.. + +....|++. +.+++.+++..+++.++|+|+++++++|+++.++. ++|
T Consensus 30 ~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~v 109 (675)
T TIGR01497 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKL 109 (675)
T ss_pred hhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 5799999999999999998531 1 111247664 33444567778888899999999999999988774 888
Q ss_pred Ee-CCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc---ccccceeeeCeEEEE
Q 002743 71 LR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 146 (885)
Q Consensus 71 ~r-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~~~ 146 (885)
+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++.++
T Consensus 110 lr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~ 188 (675)
T TIGR01497 110 LRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVE 188 (675)
T ss_pred EeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEE
Confidence 85 99999999999999999999999999999999999 68999999999999999999975 999999999999999
Q ss_pred EEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCch
Q 002743 147 VIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 147 V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL 225 (885)
|+++|.+|++||+.++++++ .+++|+|..++.+..++.+++++..+. +..+..+. .....+...+++++++|||+|
T Consensus 189 Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 189 CTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCchhh
Confidence 99999999999999999886 468999988777665543322221111 11111111 122356777899999999998
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
+...+.+...|+.+|+++|+++|++.++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++..+
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s 342 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLAD 342 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCC
Confidence 887787777899999999999999999999999999999999999999999988652 23566778888887777655
Q ss_pred CCChHHHHHHHhcCChH--HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 382 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~--~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~ 382 (885)
+ ||.+.|++.++.+.. .....++..++.||++.++++++.+. +| ..++||++|.+++.|... ...++++++.
T Consensus 343 ~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~ 417 (675)
T TIGR01497 343 D-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQA 417 (675)
T ss_pred C-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHH
Confidence 4 899999998764311 11112345678999999777665433 45 578999999999888532 2334567788
Q ss_pred HHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002743 383 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 462 (885)
Q Consensus 383 ~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG 462 (885)
+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+++|
T Consensus 418 ~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 899999999999999753 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 463 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 463 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
++ +++||++||||.++|+.+|++|+.|+|+|||+||+|||++|||||||+
T Consensus 485 I~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 485 VD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred CC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 84 269999999999999999999999999999999999999999999999
Q ss_pred cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 543 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 593 (885)
Q Consensus 543 ~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~ 593 (885)
+|+++|+++||++++++||+.+++++++||+++-.......|.++.++.-.
T Consensus 535 ~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 535 SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999999999999999999999999999999888777543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=779.39 Aligned_cols=527 Identities=27% Similarity=0.369 Sum_probs=449.3
Q ss_pred HHHHHHHHHHHHHhcCC-CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEe-CCeEEEEeCCCC
Q 002743 7 WVMEAAAIMAIALANGG-GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASIL 84 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~L 84 (885)
.++.++++.+++++... -.+.+|.++.++++++++..+++-+...|+.+++++|.++.|.++++++ ||++++||.++|
T Consensus 151 ~Lv~la~~~A~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v 230 (713)
T COG2217 151 TLVALATIGAYAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEV 230 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHC
Confidence 34555556666655100 0002347788899999999999999999999999999999999997776 566999999999
Q ss_pred CCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhh
Q 002743 85 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 164 (885)
Q Consensus 85 v~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 164 (885)
+|||+|.|++||+||+||++++| ...||||+|||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.+++|.++++
T Consensus 231 ~~GD~v~VrpGE~IPvDG~V~~G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe 309 (713)
T COG2217 231 QVGDIVLVRPGERIPVDGVVVSG-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVE 309 (713)
T ss_pred CCCCEEEECCCCEecCCeEEEeC-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHH
Confidence 99999999999999999999999 56899999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC
Q 002743 165 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 243 (885)
Q Consensus 165 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~ 243 (885)
++ .++++.|+..|+++.+++..+++..++.++++++....+|..++..++++|+++|||+|.+++|++...|..+.+++
T Consensus 310 ~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~ 389 (713)
T COG2217 310 EAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARR 389 (713)
T ss_pred HHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhC
Confidence 88 58999999999999998775555444444433333346888999999999999999999999999999999999999
Q ss_pred CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHH
Q 002743 244 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE 323 (885)
Q Consensus 244 ~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 323 (885)
|+++|+.+++|.++++|+++||||||||+|+++|.++.. . .+ ++++++.+++..+..++ ||+..|+++++.+..
T Consensus 390 GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~- 463 (713)
T COG2217 390 GILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG- 463 (713)
T ss_pred ceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999998763 2 23 78889999988887776 999999999765322
Q ss_pred HhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC
Q 002743 324 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 403 (885)
Q Consensus 324 ~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~ 403 (885)
....+..+.+|-.. .... .+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++.+.
T Consensus 464 -~~~~~~~~~i~G~G----v~~~---v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg--- 526 (713)
T COG2217 464 -LPDVEDFEEIPGRG----VEAE---VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG--- 526 (713)
T ss_pred -CCCccceeeeccCc----EEEE---ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC---
Confidence 11222234444221 1111 255 5667799998754221 1111 4556778888999988888865
Q ss_pred CCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccC
Q 002743 404 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 483 (885)
Q Consensus 404 ~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~ 483 (885)
+++|+++++|++|||++++|++||+.|+++.|+||||..+|+++|+++||+.
T Consensus 527 ----------~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------ 578 (713)
T COG2217 527 ----------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------ 578 (713)
T ss_pred ----------EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------
Confidence 8999999999999999999999999999999999999999999999999942
Q ss_pred cchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcch
Q 002743 484 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 484 ~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~ 563 (885)
++|++.||||.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|+++++..
T Consensus 579 ------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~ 646 (713)
T COG2217 579 ------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSA 646 (713)
T ss_pred ------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 564 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 597 (885)
Q Consensus 564 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 597 (885)
++.+++.+|+++++||+|+.|++.+|...+....
T Consensus 647 v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 647 VPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986555443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-86 Score=790.61 Aligned_cols=764 Identities=17% Similarity=0.203 Sum_probs=551.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCe-EEEEeCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILV 85 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv 85 (885)
+..++.+++.++- -.+...|...+.+++++.+.++.+.+|++++++....+ +..++.|+|++. +++..|++|+
T Consensus 62 ~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~ 135 (1151)
T KOG0206|consen 62 LYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVR 135 (1151)
T ss_pred HHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhhhhhccHHh---hcceeEEecCCceeeeeccceee
Confidence 4444555555552 12334677788899999999999999999999987764 457899998543 8999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCC---------------------------------
Q 002743 86 PGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNP--------------------------------- 128 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~--------------------------------- 128 (885)
+||+|++..++.+|||.+|++++ .|+|++++|+||++.+.|+.
T Consensus 136 vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~ 215 (1151)
T KOG0206|consen 136 VGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFV 215 (1151)
T ss_pred eeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhh
Confidence 99999999999999999999654 49999999999999988753
Q ss_pred --------------CCcccccceeeeCe-EEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 002743 129 --------------YDEVFSGSTCKQGE-IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVA 193 (885)
Q Consensus 129 --------------~~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~ 193 (885)
.+++++|+++++++ +.++|++||++|++++.... ...+++.+++.++.+...++++++..+++
T Consensus 216 g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~ 293 (1151)
T KOG0206|consen 216 GNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGK--PPSKRSRIERKMNKIIILLFVLLILMCLI 293 (1151)
T ss_pred hheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCC--CccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 13578899999886 89999999999987654322 23477888888888766544433332222
Q ss_pred HHHHH--hhcc-----------cc-----chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhh----------cCCc
Q 002743 194 EIIIM--YPVQ-----------HR-----KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS----------QQGA 245 (885)
Q Consensus 194 ~~~~~--~~~~-----------~~-----~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~----------~~~i 245 (885)
..+.. |... .. .....+..++.++...+|++|++.+++....++..+. ...+
T Consensus 294 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~ 373 (1151)
T KOG0206|consen 294 SAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPA 373 (1151)
T ss_pred HHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCcc
Confidence 11111 1110 00 0112456678889999999999999999999885543 3578
Q ss_pred eeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChH---------------------------------
Q 002743 246 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE--------------------------------- 292 (885)
Q Consensus 246 lvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------------------------------- 292 (885)
.+|+.+..|+||++++|++|||||||+|.|++.+|.+++.+++...+
T Consensus 374 ~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 453 (1151)
T KOG0206|consen 374 QARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGL 453 (1151)
T ss_pred ccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccc
Confidence 99999999999999999999999999999999999986544332110
Q ss_pred -----------HHHHHHHHHcc-C------------cCCChHHHHHHHhcCChH----------------HHhcCCceEE
Q 002743 293 -----------HVILLAARASR-T------------ENQDAIDAAIVGMLADPK----------------EARAGVREVH 332 (885)
Q Consensus 293 -----------~~l~~a~~~~~-~------------~~~~~~~~al~~~~~~~~----------------~~~~~~~~l~ 332 (885)
+.....+.|.. . ..+.|.+.|++..+++.. .....|+.++
T Consensus 454 ~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~ 533 (1151)
T KOG0206|consen 454 WSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLN 533 (1151)
T ss_pred cccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEE
Confidence 11222222221 1 123688888888764211 0235799999
Q ss_pred eecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhcc-CChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----
Q 002743 333 FLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----- 406 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~----- 406 (885)
.++|+|.||||||++++++|+..++||||+.+|++++. +.....++..+++++||.+|||||++|||+++++++
T Consensus 534 iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~ 613 (1151)
T KOG0206|consen 534 VLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNE 613 (1151)
T ss_pred EeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHH
Confidence 99999999999999999999999999999999999998 556678888999999999999999999999988652
Q ss_pred --------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCC
Q 002743 407 --------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN 466 (885)
Q Consensus 407 --------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~ 466 (885)
+.+|+||+++|.+++||++|+|+|++|+.|++||||+||+|||+.+||.+||.+|++..+
T Consensus 614 ~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 614 RYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 457999999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCccccC---------------------------------------------cccccccCcchHH---HHHH--hcCe
Q 002743 467 MYPSSSLLG---------------------------------------------QDKDASIAALPVD---ELIE--KADG 496 (885)
Q Consensus 467 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~---~~~~--~~~v 496 (885)
....-.+.. ......+++++.. ++.. +..+
T Consensus 694 ~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sVi 773 (1151)
T KOG0206|consen 694 DMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVI 773 (1151)
T ss_pred CceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEE
Confidence 332111111 0000011111111 1111 3458
Q ss_pred EEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhccCEEEcCCCcchHHHHHHHhHH
Q 002743 497 FAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLTSRA 573 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~ 573 (885)
|||++|.||+.+|+..++. +.++++||||+||++|+++|||||++ | +|.+|+. +||+.+.+++|...+.+| ||||
T Consensus 774 CCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW 851 (1151)
T KOG0206|consen 774 CCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHW 851 (1151)
T ss_pred EccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhh-cccchHHHHHHHhhhhee-ecce
Confidence 9999999999999999854 89999999999999999999999999 4 6666666 999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------------CCCcHHHHHHHHHHhhcc-c-cccccCCCCCC-
Q 002743 574 IFQRMKNYTIYAVSITIRIVLGFMLIALIWK----------------FDFSPFMVLIIAILNDGT-I-MTISKDRVKPS- 634 (885)
Q Consensus 574 ~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~----------------~~~~~~~il~i~i~~d~~-~-~~l~~d~~~~~- 634 (885)
.|.|+.+++.|.+++|+.+.+..+++.++.+ +.|++++++.+++|.... + ..+.++....+
T Consensus 852 ~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g 931 (1151)
T KOG0206|consen 852 SYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRG 931 (1151)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhh
Confidence 9999999999999999999998888877644 345666666666666433 1 22233332222
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 002743 635 PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 714 (885)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~ 714 (885)
++...++.++++.+ ++.|+++++++|++.+..+..+ ....-| ...++....+.+|+.+++..++. ...-+..|.
T Consensus 932 ~~~~~f~~~~f~~~-~~~g~~~sli~Ff~~~~~~~~~-~~~~~G---~~~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT 1005 (1151)
T KOG0206|consen 932 QLNLLFNWKRFWGW-MLDGFYQSLVIFFLPYLVFEEQ-AVTSNG---LTADYWTLGTTVFTIIVIVVNLK-IALETSYWT 1005 (1151)
T ss_pred hhccccchHHHHHH-HHHHHHhheeeeeeeHhhheee-eeccCC---CcCChhhccceEEEEEEEEEEee-eeeeehhee
Confidence 33445666665555 4559999999997777666432 111111 11123333445555544444444 223334566
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHH----hhc----ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchh
Q 002743 715 FIERPGLLLATAFVIAQLVATFIAV----YAN----WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAW 786 (885)
Q Consensus 715 ~~~~~~~~l~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~ 786 (885)
|.+...+|..+++. .++..++.. ..+ .+++........+|+++++..++.++|+-.+|.+.+..+|....
T Consensus 1006 ~i~~i~i~gSi~~~--f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~ 1083 (1151)
T KOG0206|consen 1006 WINHIVIWGSILLW--FVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHD 1083 (1151)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHH
Confidence 65554333322222 222112211 000 11122233345678888899999999999999998888877644
Q ss_pred hh
Q 002743 787 DT 788 (885)
Q Consensus 787 ~~ 788 (885)
..
T Consensus 1084 ~i 1085 (1151)
T KOG0206|consen 1084 II 1085 (1151)
T ss_pred HH
Confidence 33
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-82 Score=724.90 Aligned_cols=658 Identities=22% Similarity=0.336 Sum_probs=489.8
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeC
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA 81 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~ 81 (885)
.||+.+...++.+++..-+ +++.+..|+++.+.+...+.+|+++..+.++++-+ ....++|+|||.|++|++
T Consensus 194 L~PfYlFQ~fSv~lW~~d~-------Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S 265 (1140)
T KOG0208|consen 194 LNPFYLFQAFSVALWLADS-------YYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDS 265 (1140)
T ss_pred cchHHHHHhHHhhhhhccc-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEec
Confidence 3788888877777766654 66778888899999999999999999998887665 346899999999999999
Q ss_pred CCCCCCcEEEEcC-CCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-------------------Ccccccceeee-
Q 002743 82 SILVPGDVISIKL-GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------------DEVFSGSTCKQ- 140 (885)
Q Consensus 82 ~~Lv~GDiv~l~~-Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------------~~v~~Gs~v~~- 140 (885)
+|||||||+.+.+ |-..|||++|++| +|-||||+|||||.|+.|.+. +.+|.||.+.+
T Consensus 266 ~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~ 344 (1140)
T KOG0208|consen 266 SELVPGDILYIPPPGKIMPCDALLISG-DCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQA 344 (1140)
T ss_pred cccccccEEEECCCCeEeecceEEEeC-cEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEe
Confidence 9999999999998 9999999999999 799999999999999999874 46899999876
Q ss_pred -----CeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhccccchHhHHHHH
Q 002743 141 -----GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNF--CICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 213 (885)
Q Consensus 141 -----G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (885)
|.+.++|++||.+|..|++.+.+-.. ++.+++-.-+.+..+ +.++.+++ .+..++.+...+.+....+..+
T Consensus 345 r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP~~fkfyrds~~fi~~l~~ia~~g-fiy~~i~l~~~g~~~~~iiirs 422 (1140)
T KOG0208|consen 345 RAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KPVNFKFYRDSFKFILFLVIIALIG-FIYTAIVLNLLGVPLKTIIIRS 422 (1140)
T ss_pred ecCCCCceEEEEEeccccccccHHHHhhcCC-CCcccHHHHHHHHHHHHHHHHHHHH-HHHHhHhHHHcCCCHHHHhhhh
Confidence 45899999999999999877766543 334444443433222 21111111 1112222334577888899999
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc--cC---
Q 002743 214 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA--KG--- 288 (885)
Q Consensus 214 l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~--~~--- 288 (885)
+-++...+|.|||.++++....+..||.|+||.|-+++.+...|++|++|||||||||++.+.+-.+....-+ .+
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~ 502 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPEL 502 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999998765531000 00
Q ss_pred -------------------CCh--HHHHHHHHHHcc-----CcCCChHHHHHHHhcC-----------------------
Q 002743 289 -------------------VEK--EHVILLAARASR-----TENQDAIDAAIVGMLA----------------------- 319 (885)
Q Consensus 289 -------------------~~~--~~~l~~a~~~~~-----~~~~~~~~~al~~~~~----------------------- 319 (885)
..+ .....+|.+++- ...+||+|..+.+.-+
T Consensus 503 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v 582 (1140)
T KOG0208|consen 503 KVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTV 582 (1140)
T ss_pred hhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCE
Confidence 001 112222222221 1235787765544221
Q ss_pred -ChHH--------Hh-cCCceEEeecCCCCCccEEEEEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHH
Q 002743 320 -DPKE--------AR-AGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAE 388 (885)
Q Consensus 320 -~~~~--------~~-~~~~~l~~~pf~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~ 388 (885)
+|.+ .. ..+.+++.+||+|.-+||||++.++ +.+...|+|||||.|.+.|+. +.+++.+++.+++|+.
T Consensus 583 ~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~ 661 (1140)
T KOG0208|consen 583 VRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTH 661 (1140)
T ss_pred eCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHh
Confidence 1100 01 1467889999999999999999875 467799999999999999984 5678889999999999
Q ss_pred cCCeEEEEEeeecCCC--------CCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002743 389 RGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 389 ~Glr~l~~a~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~ 460 (885)
+|+|++|+|+|+++.. +++..|++|+|+|++.||+++|++++.+|++|++|.|+++|+||||..||..+||+
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 9999999999999876 36788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCC----------c--------------cc--------------------cCcccccccC-----------cc
Q 002743 461 LGMGTNMYPS----------S--------------SL--------------------LGQDKDASIA-----------AL 485 (885)
Q Consensus 461 lGi~~~~~~~----------~--------------~~--------------------~~~~~~~~~~-----------~~ 485 (885)
||+....... . .. .+.+..-.++ .+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 9995421100 0 00 0000000122 22
Q ss_pred hHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHH
Q 002743 486 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 486 ~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~ 565 (885)
.+++++.+.+||||++|.||.++|+.||+-|+.|+|+|||+||+.|||+||+||+++++. |.-||.+.-.-++.+.++
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHh
Confidence 355667788999999999999999999999999999999999999999999999998654 555788888778999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhcc-cccccc----CCCCCCCCCCcc
Q 002743 566 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPQPDSW 640 (885)
Q Consensus 566 ~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~----d~~~~~~~~~~~ 640 (885)
+.|++||..+-.--..+.|...+.+..++..++ ...-+..++-+|.+++.++-..+ +..++. ++..+.|+|.+.
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L 978 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVVF-LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNL 978 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccc
Confidence 999999997766666666665555433222221 11234567888988888876544 333332 333334444444
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFS 674 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 674 (885)
-.++.+.-.+.+-++..+.-+..+++.....|+.
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 3334433333323333333334444445555654
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=758.68 Aligned_cols=515 Identities=26% Similarity=0.363 Sum_probs=447.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCC
Q 002743 5 LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 84 (885)
Q Consensus 5 ~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~L 84 (885)
+-.++.++++.+++++ .|.++.+++++++++..++.++++|+++++++|+++.+++++|+|||++++|++++|
T Consensus 189 ~~~L~~~a~~~a~~~~-------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l 261 (741)
T PRK11033 189 IETLMSVAAIGALFIG-------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADL 261 (741)
T ss_pred ccHHHHHHHHHHHHHc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHC
Confidence 3345566777777775 789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhh
Q 002743 85 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 164 (885)
Q Consensus 85 v~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 164 (885)
+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+|||.++++
T Consensus 262 ~~GDiv~v~~G~~IP~Dg~vi~g-~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~ 340 (741)
T PRK11033 262 RPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIE 340 (741)
T ss_pred CCCCEEEECCCCEEecceEEEEC-cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHH
Confidence 99999999999999999999999 58999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC
Q 002743 165 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 243 (885)
Q Consensus 165 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~ 243 (885)
++ .+++++|+.++++++++...+++..++.+++++...+.+|..++...+++++++|||+|.+++|++...+..+++|+
T Consensus 341 ~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 341 EAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 87 47899999999999988766555444444444344566788899999999999999999999999999999999999
Q ss_pred CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHH
Q 002743 244 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE 323 (885)
Q Consensus 244 ~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 323 (885)
|+++|+.+++|+|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++.+.
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-- 494 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-- 494 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc--
Confidence 999999999999999999999999999999999998652 2345677888877766544 3599999999876421
Q ss_pred HhcCCceEEeecCCCCCccEEEE-EE-cCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q 002743 324 ARAGVREVHFLPFNPVDKRTALT-YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEI 401 (885)
Q Consensus 324 ~~~~~~~l~~~pf~s~~kr~sv~-~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~ 401 (885)
+. .+||.+..+.+.-. ++ ..+|+. +..|+++.+.+ ..+++.+.++++.++|+|+++++++.
T Consensus 495 ---~~----~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~- 557 (741)
T PRK11033 495 ---GL----AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND- 557 (741)
T ss_pred ---CC----CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-
Confidence 11 24666655554321 11 234543 44689988754 12334556678899999999999854
Q ss_pred CCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002743 402 PEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 481 (885)
Q Consensus 402 ~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~ 481 (885)
+++|+++++|++|||++++|++|+++|++++|+|||+..+|..+|+++||.
T Consensus 558 ------------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------- 608 (741)
T PRK11033 558 ------------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------- 608 (741)
T ss_pred ------------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------
Confidence 899999999999999999999999999999999999999999999999983
Q ss_pred cCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCc
Q 002743 482 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 561 (885)
Q Consensus 482 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~ 561 (885)
.++++.|+||.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+|+++++||+++.++++
T Consensus 609 --------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 609 --------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred --------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCH
Confidence 25778999999999999965 589999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 562 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 594 (885)
Q Consensus 562 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 594 (885)
..++.+++.||++++||++|+.|++.+|...+.
T Consensus 674 ~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 674 RGLAQMIELSRATHANIRQNITIALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999975443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-81 Score=717.57 Aligned_cols=539 Identities=24% Similarity=0.335 Sum_probs=451.7
Q ss_pred CCChhh-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCe-EEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 002743 26 DPDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADAR 103 (885)
Q Consensus 26 ~~~~~~-~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ 103 (885)
++.++| ..+++.++.+...++.....|+..++..|+...|.++.++.+|+ .++|+.+.|++||+|.+++|++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 444555 45566677788888888888888999999998899999999996 8999999999999999999999999999
Q ss_pred EEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHH
Q 002743 104 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNF 182 (885)
Q Consensus 104 ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~ 182 (885)
+++| +++||||.+|||++||.|++|+.|.+||.+.+|.....++.+|.+|.+++|.+|+++++ .+.|.|+.+|+++.+
T Consensus 417 Vv~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 9999 68999999999999999999999999999999999999999999999999999999984 889999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhccc----------cchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChh
Q 002743 183 CICSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 252 (885)
Q Consensus 183 ~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~ 252 (885)
+...+++..++.++++.++.. ..+..++..++++++++|||+|.++.|++..+|....+++|+++|..++
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 766555534433333322221 3456678888999999999999999999999999999999999999999
Q ss_pred hhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEE
Q 002743 253 IEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVH 332 (885)
Q Consensus 253 ~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~ 332 (885)
+|.+.+++++.||||||||+|++.|.+... .....+..+++.+++..+... .||+..|++.++.+..........++
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~ 652 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLS 652 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccce
Confidence 999999999999999999999999998764 333356666776666555444 49999999999864331111112223
Q ss_pred eecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCC
Q 002743 333 FLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAP 412 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~ 412 (885)
+..|....+...+. .+|+. ++-|.-+.+...- ....+.+...+++-...|..+.+++...
T Consensus 653 ~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------ 712 (951)
T KOG0207|consen 653 FEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG------------ 712 (951)
T ss_pred eecccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC------------
Confidence 33333333221222 23433 6779888876422 2234457777788888999999999977
Q ss_pred ceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHH
Q 002743 413 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 492 (885)
Q Consensus 413 l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (885)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|+++|+++|+.
T Consensus 713 -~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------- 763 (951)
T KOG0207|consen 713 -QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------- 763 (951)
T ss_pred -EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------
Confidence 899999999999999999999999999999999999999999999999963
Q ss_pred hcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhH
Q 002743 493 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 572 (885)
Q Consensus 493 ~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR 572 (885)
+|+|++.|+||.++||.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+++++..++.++..+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHh
Q 002743 573 AIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILN 619 (885)
Q Consensus 573 ~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~ 619 (885)
++.+|+|.|+.|++.+|+..++...+.++.|++.++|++--..-.+.
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~S 888 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAAS 888 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhh
Confidence 99999999999999999977777777777777778887654444443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-79 Score=712.62 Aligned_cols=475 Identities=36% Similarity=0.538 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHh--cCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEE
Q 002743 36 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 113 (885)
Q Consensus 36 ~~~~~~~~~i~~~~e~~a~~~~~~l~~--~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vd 113 (885)
+++++++.+++.+++++++++.++|++ ..+++++|+||| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 456788899999999999999999998 778899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002743 114 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 191 (885)
Q Consensus 114 es~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 191 (885)
||+|||||.|+.|.+||.+++||.+.+|++.+.|+.+|.+|..+++..++.+.. .++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999998 45444333322
Q ss_pred HHHHHHHhhcccc--chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCC
Q 002743 192 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 269 (885)
Q Consensus 192 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGT 269 (885)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222211112 37789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEEEEEc
Q 002743 270 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 349 (885)
Q Consensus 270 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~ 349 (885)
||+|+|+|.++... . . ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999987752 123578999999999998875
Q ss_pred CCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcch
Q 002743 350 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 429 (885)
Q Consensus 350 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 429 (885)
.++ .++||+++.+.++|.. +.+..++++++|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999988752 2334556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHH
Q 002743 430 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 509 (885)
Q Consensus 430 ~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 509 (885)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002743 510 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 589 (885)
Q Consensus 510 ~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 589 (885)
+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002743 590 IRIVLGFML 598 (885)
Q Consensus 590 i~~~~~~~~ 598 (885)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875555443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-77 Score=703.44 Aligned_cols=518 Identities=26% Similarity=0.376 Sum_probs=439.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC-eEEEEeCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILV 85 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg-~~~~i~~~~Lv 85 (885)
..+.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+
T Consensus 3 ~l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 3 LLMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCC
Confidence 45677788888887 89999999999999999999999999999999999999999999996 99999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhc
Q 002743 86 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 165 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~ 165 (885)
|||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.+++++
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 9999999999999999999999 589999999999999999999999999999999999999999999999999999987
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCC
Q 002743 166 T-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 244 (885)
Q Consensus 166 ~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ 244 (885)
+ .+++++|+.+++++++++..++++.++.+++++. ...+ .++..++++++++|||+||+++++++..+..+++++|
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~g 231 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRG 231 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCC
Confidence 6 5789999999999988766554434333333322 2222 7888999999999999999999999999999999999
Q ss_pred ceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCC--hHHHHHHHHHHccCcCCChHHHHHHHhcCChH
Q 002743 245 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPK 322 (885)
Q Consensus 245 ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~ 322 (885)
+++|+++++|.||++|++|||||||||+|+|+|.+... . .+.+ .++++.+++.++.. ..||++.|+++++....
T Consensus 232 ilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~ 307 (556)
T TIGR01525 232 ILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRG 307 (556)
T ss_pred ceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998753 1 2233 66777777666554 45999999998875321
Q ss_pred HHhcCCc-eEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q 002743 323 EARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEI 401 (885)
Q Consensus 323 ~~~~~~~-~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~ 401 (885)
..... + ..+++| .+.....+ +|. ..+..|+++.+ + ... .+ .+..+..+++++++|+|+++++.+.
T Consensus 308 ~~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~- 373 (556)
T TIGR01525 308 LELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG- 373 (556)
T ss_pred CCccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-
Confidence 10000 1 112221 11222221 341 35667888876 1 111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccccc
Q 002743 402 PEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480 (885)
Q Consensus 402 ~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aG-I~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~ 480 (885)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~---------------- 425 (556)
T TIGR01525 374 ------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------------- 425 (556)
T ss_pred ------------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC----------------
Confidence 899999999999999999999999999 999999999999999999999984
Q ss_pred ccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 481 ~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+|+++.|++|.++++.+|+.++.|+|+|||.||+||+++||+||++|++++.++++||+++.+++
T Consensus 426 --------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~ 491 (556)
T TIGR01525 426 --------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDD 491 (556)
T ss_pred --------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCC
Confidence 258899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 561 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 561 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
++.+..++++||++++|+++++.|++.+|+..+..
T Consensus 492 ~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 492 LSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999865543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-77 Score=699.03 Aligned_cols=500 Identities=30% Similarity=0.413 Sum_probs=430.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 86 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~ 86 (885)
.++.++++++++++ +|.++.+|+++++++..+++++++|+.+++++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 45778888889887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc
Q 002743 87 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 166 (885)
Q Consensus 87 GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 166 (885)
||+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~ 154 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA 154 (536)
T ss_pred CCEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH
Confidence 999999999999999999999 6799999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCc
Q 002743 167 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 245 (885)
Q Consensus 167 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~i 245 (885)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gi 232 (536)
T TIGR01512 155 QSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGI 232 (536)
T ss_pred hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCe
Confidence 578899999999998876665554444344333222 23347888999999999999999999999999999999999
Q ss_pred eeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHh
Q 002743 246 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR 325 (885)
Q Consensus 246 lvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~ 325 (885)
++|+++++|++|++|++|||||||||+|+|+|.+... .+++.+++..+. ...||++.|+++++.+.+
T Consensus 233 lik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~--- 299 (536)
T TIGR01512 233 LIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE--- 299 (536)
T ss_pred EEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999988642 256777665444 445999999998875321
Q ss_pred cCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC
Q 002743 326 AGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 405 (885)
Q Consensus 326 ~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~ 405 (885)
.....+.+|. +..... .+|+ .+..|+++.+.+.. .+.+..+|.+++.++.+
T Consensus 300 -~~~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------ 350 (536)
T TIGR01512 300 -NVESVEEVPG----EGVRAV---VDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARD------ 350 (536)
T ss_pred -CCcceEEecC----CeEEEE---ECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC------
Confidence 2222333331 111111 2454 34568887653311 01456678888877754
Q ss_pred CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCc
Q 002743 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 484 (885)
Q Consensus 406 ~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI-~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~ 484 (885)
..++|.+.++|++|||++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 351 -------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------- 404 (536)
T TIGR01512 351 -------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------- 404 (536)
T ss_pred -------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------
Confidence 38999999999999999999999999999 999999999999999999999842
Q ss_pred chHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcch
Q 002743 485 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 485 ~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~ 563 (885)
+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.++++..
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 47888999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 564 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 564 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
+.+++..||++++|+++++.|++.+|+..+..
T Consensus 474 l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 474 LPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999754433
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-76 Score=697.00 Aligned_cols=506 Identities=26% Similarity=0.380 Sum_probs=425.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC-CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 106 (885)
Q Consensus 28 ~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 106 (885)
+|..+.+++++++++..++.+.++|+++++++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||++++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455666677888888889899999999999999999999999985 778999999999999999999999999999999
Q ss_pred eCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002743 107 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 185 (885)
Q Consensus 107 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~ 185 (885)
| ++.||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5799999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeec
Q 002743 186 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 265 (885)
Q Consensus 186 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~D 265 (885)
.+++..++. ++.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~-~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALIT-FVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHH-HHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 544433222 2222 24788999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEE
Q 002743 266 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 345 (885)
Q Consensus 266 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv 345 (885)
||||||+|+|++.++.. ..+.+.++++.+++..+...+ ||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998752 224566788888877665554 9999999988743211111122222222 122222
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCC
Q 002743 346 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 425 (885)
Q Consensus 346 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~l 425 (885)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++... +++|++.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 244 4567899998643211 1 112456899999887654 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcH
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 505 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 505 (885)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHH
Q 002743 506 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 585 (885)
Q Consensus 506 ~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 585 (885)
.++++.+|++++.|+|+|||.||+||+++||+||+||.|++.++++||+++.++++..+..+++.||++++++++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcHH
Q 002743 586 VSITIRIVLGFMLIALIWKFDFSPF 610 (885)
Q Consensus 586 ~~~ni~~~~~~~~~~~~~~~~~~~~ 610 (885)
+.+|+..+...+...+.+++.++|.
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444444445553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-75 Score=718.84 Aligned_cols=521 Identities=24% Similarity=0.305 Sum_probs=437.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEee
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 107 (885)
Q Consensus 28 ~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g 107 (885)
+|..+..+++++.++.+++.+.+.|+.+++++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||++++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002743 108 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 108 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 186 (885)
++.||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ ..++++|+..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 47889999999999887655
Q ss_pred HHHHHHHHHHHHhhcccc--chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEee
Q 002743 187 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 264 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~ 264 (885)
+++..++.+++ |+..+. .+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 54433333333 332222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEE
Q 002743 265 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 344 (885)
Q Consensus 265 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~s 344 (885)
|||||||+|+|+|.+... ..+.++++++.+++..+...+ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987642 224567777887777665544 999999998764210 0111 122222211 1
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCC
Q 002743 345 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 424 (885)
Q Consensus 345 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~ 424 (885)
+... .+|+ .+.+|+++.+.+.... .+.+.+.++++.++|.+++.++++. +++|++.+.|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2453 4567999987542211 2345666778889999999999865 79999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhc
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 504 (885)
+|||++++|++|++.|+++.|+|||+..+|..+++++|+.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 588999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHH
Q 002743 505 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 584 (885)
Q Consensus 505 K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 584 (885)
|.++++.+|++++.|+|+|||.||+||+++||+||+||+|+|.++++||++++++++..|..++++||+++++|++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCCcHHHH
Q 002743 585 AVSITIRIVLGFMLIALI-WKFDFSPFMV 612 (885)
Q Consensus 585 ~~~~ni~~~~~~~~~~~~-~~~~~~~~~i 612 (885)
++.+|+..+...++.+.. +++.++|+.-
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHH
Confidence 999998665544322211 2334666543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-75 Score=643.13 Aligned_cols=734 Identities=20% Similarity=0.268 Sum_probs=507.3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEE-EeCCeEEEEe
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKV-LRDGRWSEQD 80 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V-~rdg~~~~i~ 80 (885)
.|.+++++.++.++-.+.- +....+|...++++.+.++...++-++++++.+.. ++.+.++ -|||...+ +
T Consensus 107 ~nlyfll~alsQ~ip~~~i--g~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~------Nse~y~~ltr~~~~~~-~ 177 (1051)
T KOG0210|consen 107 LNLYFLLVALSQLIPALKI--GYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDREL------NSEKYTKLTRDGTRRE-P 177 (1051)
T ss_pred HHHHHHHHHHHhhCchhee--cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh------hhhhheeeccCCcccc-c
Confidence 4555555555555444321 11123566666666666666666666666665532 2344444 47876655 9
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCC----------------------------
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNP---------------------------- 128 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~---------------------------- 128 (885)
++++++||+|.++.+++||||.++++.+ +|+|-+-.|+||+.-+-|-|
T Consensus 178 Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh 257 (1051)
T KOG0210|consen 178 SSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIH 257 (1051)
T ss_pred ccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhH
Confidence 9999999999999999999999999532 69999999999997665533
Q ss_pred -------------------CCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc---CCCCcHHHHHHHHHHHHHHH
Q 002743 129 -------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST---NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 129 -------------------~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~---~~~~~~~~~~~~i~~~~~~~ 186 (885)
.|+++++|.+.+|.+.|+|++||.+|. ..++.+ .+.+.++..+|.+.+.+.+.
T Consensus 258 ~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR-----svMNts~pr~KvGllelEiN~ltKiL~~~ 332 (1051)
T KOG0210|consen 258 SFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR-----SVMNTSRPRSKVGLLELEINGLTKILFCF 332 (1051)
T ss_pred hhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH-----HHhccCCcccccceeeeecccHHHHHHHH
Confidence 257999999999999999999999995 334433 36677888888888876554
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC----CceeccChhhhhccCceEE
Q 002743 187 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ----GAITKRMTAIEEMAGMDVL 262 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~----~ilvk~~~~~E~Lg~v~~I 262 (885)
+++..+ .++..-..+.+|...+..++.++...||++|-+.+.+++.+-++.+.++ |.++|+.+.-|+||.++++
T Consensus 333 vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsyl 410 (1051)
T KOG0210|consen 333 VLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYL 410 (1051)
T ss_pred HHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEE
Confidence 443222 2223334567888889999999999999999999999999999888764 6889999999999999999
Q ss_pred eeccCCCCCCCceEEEEEeeeecccCCCh-----------------------------------HHHHHHHHHHccCc--
Q 002743 263 CSDKTGTLTLNKLTVDRNLIEVFAKGVEK-----------------------------------EHVILLAARASRTE-- 305 (885)
Q Consensus 263 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-----------------------------------~~~l~~a~~~~~~~-- 305 (885)
.+|||||||+|+|.+++++....+.+.+. +.+..+|.+++-.+
T Consensus 411 LtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~ 490 (1051)
T KOG0210|consen 411 LTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVF 490 (1051)
T ss_pred EecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCccc
Confidence 99999999999999999887533322111 11223333332211
Q ss_pred ---------CCChHHHHHHHhcC-----------------ChHHHhcCCceEEeecCCCCCccEEEEEEcC-CCcEEEEE
Q 002743 306 ---------NQDAIDAAIVGMLA-----------------DPKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRAS 358 (885)
Q Consensus 306 ---------~~~~~~~al~~~~~-----------------~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~-~g~~~~~~ 358 (885)
..+|.|.|+++.-. .+......|++++.+||+|+.|||.++++++ .|+...+.
T Consensus 491 e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfyl 570 (1051)
T KOG0210|consen 491 EDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYL 570 (1051)
T ss_pred CCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEE
Confidence 11344444443211 1111224789999999999999999999986 68899999
Q ss_pred cCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC--------------------------CCCCC
Q 002743 359 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKE--------------------------SPGAP 412 (885)
Q Consensus 359 KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~--------------------------~~e~~ 412 (885)
|||+.+|-...+. .+++++...+||++|+|||.+|.|.+++++++ .+|.+
T Consensus 571 KGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~d 646 (1051)
T KOG0210|consen 571 KGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERD 646 (1051)
T ss_pred ecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhh
Confidence 9999998877664 35777888999999999999999999876521 36899
Q ss_pred ceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc----------------Cc
Q 002743 413 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL----------------GQ 476 (885)
Q Consensus 413 l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~----------------~~ 476 (885)
|+++|+++.||++|+|++.+++.||+||||+||+|||+.+||+.||++.++.+......++. ..
T Consensus 647 lelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k 726 (1051)
T KOG0210|consen 647 LELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRK 726 (1051)
T ss_pred hHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999965322111110 00
Q ss_pred c-cccccCcc-----------hHHHHHHh--cCeEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 477 D-KDASIAAL-----------PVDELIEK--ADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 477 ~-~~~~~~~~-----------~~~~~~~~--~~v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
. ..-.++++ ++-++..+ +.++||++|+||+++++.+|++ |..|+++|||.||+.|+++||+||++
T Consensus 727 ~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI 806 (1051)
T KOG0210|consen 727 TDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI 806 (1051)
T ss_pred CCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee
Confidence 0 00012222 33333332 4589999999999999999986 89999999999999999999999999
Q ss_pred -c-cchHHHHhccCEEEcCCCcchHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcH-------HH
Q 002743 542 -A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSP-------FM 611 (885)
Q Consensus 542 -g-~~td~a~~aADivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~-------~~ 611 (885)
| +|.+ |.-|||+.+++ |+.+-.++ -|||..|+|-.+.-+|.+-....+..+..++... +.|.| ++
T Consensus 807 ~gkEGkQ-ASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v--~yF~~V~LyqG~Lm 881 (1051)
T KOG0210|consen 807 VGKEGKQ-ASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSV--FYFAPVALYQGFLM 881 (1051)
T ss_pred ecccccc-cchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHH--hhhcchHHhhhhHH
Confidence 6 5555 45599999987 55555543 3899999999998888766555444333333221 11222 33
Q ss_pred HHHHHHHhhccccccccCCCCCC-------------CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 002743 612 VLIIAILNDGTIMTISKDRVKPS-------------PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG 678 (885)
Q Consensus 612 il~i~i~~d~~~~~l~~d~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 678 (885)
+.+..+.+-.+..++-.|+.-.+ .+......+.++.| +++++|+..+...++++.+.+.|+
T Consensus 882 vgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw-vLISiYQG~vim~g~~~l~~~ef~----- 955 (1051)
T KOG0210|consen 882 VGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW-VLISIYQGSVIMYGALLLFDTEFI----- 955 (1051)
T ss_pred HHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh-hhHHHHcccHHHHHHHHHhhhhhe-----
Confidence 44455555455566666653211 12233344555555 445888887777655555433221
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHH-hhhccCCCCcccchhHHHHHHHHHHHHHHHHHH----Hhhcccccccccchh
Q 002743 679 VRSLRTRPDEMMAALYLQVSIISQALI-FVTRSRSWSFIERPGLLLATAFVIAQLVATFIA----VYANWSFARIEGCGW 753 (885)
Q Consensus 679 ~~~~~~~~~~~~t~~f~~~~~~~~~~~-~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 753 (885)
...++.|..+++.....+ +-+++ |.| .++.+-++++.+..+.. -|..+.| -.+|
T Consensus 956 ---------~ivaisFtaLi~tELiMVaLtv~t--w~~------~m~vae~lsL~~Yivsl~~l~~yfd~~f----~~~~ 1014 (1051)
T KOG0210|consen 956 ---------HIVAISFTALILTELIMVALTVRT--WHW------LMVVAELLSLALYIVSLAFLHEYFDRYF----ILTY 1014 (1051)
T ss_pred ---------EeeeeeeHHHHHHHHHHHhhhhhh--hhH------HHHHHHHHHHHHHHHHHHHHHhHHHHHH----HHHH
Confidence 223555666666665543 33343 332 23334333332211111 1111111 1345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchhh
Q 002743 754 GWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWD 787 (885)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 787 (885)
.+++-+.++.++..+|..+.|.++|+..||+..+
T Consensus 1015 ~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1015 VFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 5555556777788889999999999999988654
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-66 Score=578.83 Aligned_cols=519 Identities=25% Similarity=0.290 Sum_probs=392.5
Q ss_pred chHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC--CCceEEEeCCeEEEEe
Q 002743 3 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANL--APKTKVLRDGRWSEQD 80 (885)
Q Consensus 3 ~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~--~~~~~V~rdg~~~~i~ 80 (885)
.|++........++..-. +|+..++-+++++....--..|+.+ .+..++++- +....|.|+++|+.+.
T Consensus 198 aPfFVFQVFcvgLWCLDe-------yWYySlFtLfMli~fE~tlV~Qrm~---~lse~R~Mg~kpy~I~v~R~kKW~~l~ 267 (1160)
T KOG0209|consen 198 APFFVFQVFCVGLWCLDE-------YWYYSLFTLFMLIAFEATLVKQRMR---TLSEFRTMGNKPYTINVYRNKKWVKLM 267 (1160)
T ss_pred CceeeHhHHhHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhcCCCceEEEEEecCcceecc
Confidence 366666666666766654 8999888887776664444445444 444454443 4568899999999999
Q ss_pred CCCCCCCcEEEEcC---CCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-----------------Ccccccceeee
Q 002743 81 ASILVPGDVISIKL---GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ 140 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~---Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gs~v~~ 140 (885)
++||.|||+|.+.. ...||||.+|+.| +|.|||++|||||.|.-|.+- ..+|.||.+++
T Consensus 268 seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQ 346 (1160)
T KOG0209|consen 268 SEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQ 346 (1160)
T ss_pred ccccCCCceEEeccCcccCcCCceEEEEec-ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEE
Confidence 99999999999987 6789999999999 799999999999999999761 36899999875
Q ss_pred -------------CeEEEEEEEeccchhhhhHhhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Q 002743 141 -------------GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH--- 203 (885)
Q Consensus 141 -------------G~~~~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~--- 203 (885)
|-+.+.|++||.+|.-|++.+-+-- +++.+.-.+ +. +++++.+ +++.++..++.|.
T Consensus 347 ht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~--Et---f~FILFL--lVFAiaAa~Yvwv~Gs 419 (1160)
T KOG0209|consen 347 HTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR--ET---FIFILFL--LVFAIAAAGYVWVEGS 419 (1160)
T ss_pred ecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH--HH---HHHHHHH--HHHHHHhhheEEEecc
Confidence 5589999999999999987775543 333222111 11 1111111 1111122222221
Q ss_pred ----cchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEE
Q 002743 204 ----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR 279 (885)
Q Consensus 204 ----~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~ 279 (885)
++-...++-+..++...+|.-||+-++++.-.+...|+|.+++|..+=.+--.|++|+-|||||||||+..|.|..
T Consensus 420 kd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 420 KDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred cCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 1222345566677888999999999999998888999999999999999999999999999999999999999987
Q ss_pred Eeeeecc-------cCCChHHHHHHHHHHcc-----CcCCChHHHHHHHhcCChHH----------HhcCCceEEeecCC
Q 002743 280 NLIEVFA-------KGVEKEHVILLAARASR-----TENQDAIDAAIVGMLADPKE----------ARAGVREVHFLPFN 337 (885)
Q Consensus 280 ~~~~~~~-------~~~~~~~~l~~a~~~~~-----~~~~~~~~~al~~~~~~~~~----------~~~~~~~l~~~pf~ 337 (885)
+.-.... ...+.+.+..+|++++- .-.+||+|+|.++.++..-+ ...+.++.+-+.|+
T Consensus 500 vag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 500 VAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred cccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 5420000 01122344555554432 23469999999998742111 11246677888999
Q ss_pred CCCccEEEEEEcC----CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC--------CC
Q 002743 338 PVDKRTALTYIDS----DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KT 405 (885)
Q Consensus 338 s~~kr~sv~~~~~----~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~--------~~ 405 (885)
|.-|||+++..-. +-+++..+|||||.|-++.. ++++.+++...+++++|.||||++||.++. -+
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~ 656 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLK 656 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhh
Confidence 9999999887532 13678899999999988775 466788888999999999999999999873 24
Q ss_pred CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC---------c-----
Q 002743 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------S----- 471 (885)
Q Consensus 406 ~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~---------~----- 471 (885)
+|+.|++|+|.|++.|.-|+|+|++++|++|++.+.+++||||||+.||.++|+++|+....-.. .
T Consensus 657 Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~ 736 (1160)
T KOG0209|consen 657 REDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWV 736 (1160)
T ss_pred hhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEe
Confidence 67899999999999999999999999999999999999999999999999999999996431100 0
Q ss_pred c-------------------------ccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCc
Q 002743 472 S-------------------------LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV 526 (885)
Q Consensus 472 ~-------------------------~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~ 526 (885)
. ++|...+.....+.+.+++..+.||||+.|.||..++..|++.|+.++|||||.
T Consensus 737 s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGT 816 (1160)
T KOG0209|consen 737 SVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGT 816 (1160)
T ss_pred cCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCC
Confidence 0 011111111122345667777889999999999999999999999999999999
Q ss_pred CChhhhhcCCeeEEec
Q 002743 527 NDAPALKKADIGIAVA 542 (885)
Q Consensus 527 NDa~aLk~AdvGIa~g 542 (885)
||+.|||+||||||+=
T Consensus 817 NDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 817 NDVGALKQAHVGVALL 832 (1160)
T ss_pred cchhhhhhcccceehh
Confidence 9999999999999984
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-63 Score=536.46 Aligned_cols=518 Identities=25% Similarity=0.373 Sum_probs=406.5
Q ss_pred cchHHHHHHHHHHHHHHHh-cC---CCCCCChhhHHHHHHHHHHHHHHH----HHHHHhHHHHHHHHHhcC-CCceEEEe
Q 002743 2 WNPLSWVMEAAAIMAIALA-NG---GGRDPDWQDFVGIIVLLVINSTIS----FIEENNAGNAAAALMANL-APKTKVLR 72 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~-~~---~~~~~~~~~~~~i~~~~~~~~~i~----~~~e~~a~~~~~~l~~~~-~~~~~V~r 72 (885)
.||..++.++.++++.++. .+ ++...++...+.|.+++.+..++. .+.|-|.+-..++|++.. ...+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 6999999999999988432 11 111123333333444444444444 444444444455665533 33567777
Q ss_pred C-CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---CcccccceeeeCeEEEEEE
Q 002743 73 D-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAVVI 148 (885)
Q Consensus 73 d-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~~V~ 148 (885)
+ |.++.+++.+|+.||+|.++.||+||+||.++|| ..+||||++||||-||-|.+| +.|-.||.+.+..++.+++
T Consensus 111 ~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irit 189 (681)
T COG2216 111 ADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRIT 189 (681)
T ss_pred CCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEE
Confidence 5 9999999999999999999999999999999999 689999999999999999998 6799999999999999999
Q ss_pred EeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccchHhHHHHHHHHHHHHcCCch
Q 002743 149 ATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 149 ~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~llv~~iP~aL 225 (885)
+.-.+|++.|+..+++.+ .+++|-+--++-+..-+. ++ +++...-.|++. ...-.-.+...++++++.||-..
T Consensus 190 a~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---li-FL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 190 ANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LI-FLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred cCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HH-HHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccH
Confidence 999999999999999987 466765544333211111 11 111111122211 10111346677899999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
.--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|.=.-.++. ...+.+.+++...+..++-..
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhcc
Confidence 88888888889999999999999999999999999999999999999876555554 245788888887777666443
Q ss_pred CCChHHHHHHHhcCChH-HHh-cCCc-eEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHA 381 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~-~~~-~~~~-~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~ 381 (885)
. .|-.++++..+.+.. +.+ +... .-+++||+...++..+-. +++ ..+.|||.+.+.+..+... ..++.+++
T Consensus 343 e-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 E-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred C-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3 565666666553221 111 1111 357899988776555432 233 6788999999998876433 36788899
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 382 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 382 ~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
..++-++.|-..|+++... +++|++.+.|-++||.+|-+++||+.|||.+|+||||+.||..||++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999866 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 462 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 462 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
|+++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9853 3789999999999999999999999999999999999999999999
Q ss_pred ccchHHHHhccCEEEcCCCcchHHHHHHHhHHHH
Q 002743 542 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 575 (885)
Q Consensus 542 g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~ 575 (885)
.+||++||||+.+|=+|.|...+++.++.|++..
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=314.65 Aligned_cols=221 Identities=35% Similarity=0.513 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCc-eEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEE
Q 002743 34 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 112 (885)
Q Consensus 34 ~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~V 112 (885)
+++++++++.++++++++|+++.++++++..+++ ++|+|||+++++++++|+|||+|.+++||.+||||++++.+.++|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 4678889999999999999999999999988887 999999999999999999999999999999999999999338999
Q ss_pred EeccccCCCCccccC-----CCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002743 113 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 113 des~LTGEs~pv~K~-----~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 186 (885)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|+.|++.+.+.... +++++++.++++..++...
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999987764 5689999999999887655
Q ss_pred HHHHHHHHHHHHhhc--cccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhh
Q 002743 187 IAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 255 (885)
Q Consensus 187 i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~ 255 (885)
++++.++.+ +.++. ...++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 544343333 33333 567788899999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=238.96 Aligned_cols=211 Identities=32% Similarity=0.412 Sum_probs=151.8
Q ss_pred ceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCC
Q 002743 259 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 338 (885)
Q Consensus 259 v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s 338 (885)
|++||||||||||+|++.+ . . .+...++..+...+...+ ||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 445556666655544444 99999998877543222 11 122222
Q ss_pred CCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEe
Q 002743 339 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 418 (885)
Q Consensus 339 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~ 418 (885)
...++..... ++. +. |+++.+.+..... .. ...........|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--IS--PDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--cc--cchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222222211 122 22 8888876654321 11 11112223445555555554 3489999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
+.+.|+||||++++|+.|+++|++++|+|||+..+|..+++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999932 13799
Q ss_pred ee--ChhcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCC
Q 002743 499 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 499 r~--sP~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad 536 (885)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-15 Score=133.70 Aligned_cols=123 Identities=26% Similarity=0.394 Sum_probs=107.3
Q ss_pred eeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 414 ~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
...+.++---++=++++++|++|++. +++.+.|||...+-...|.-.|++.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777788889999999999999 99999999999999999999998643
Q ss_pred cCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-c--cchHHHHhccCEEEcCCCcchHHHH
Q 002743 494 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 494 ~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g--~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
++|+...|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 4 4566677999999954 4444443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-08 Score=112.04 Aligned_cols=210 Identities=18% Similarity=0.208 Sum_probs=142.4
Q ss_pred CCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-----------CCccc------
Q 002743 411 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------ 473 (885)
Q Consensus 411 ~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-----------~~~~~------ 473 (885)
.+-.|.|++...-++|++....|+.|-++-|+.+-.+-.++...+-.|.++||..... +....
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 3457899999999999999999999999999999999999999999999999964211 10000
Q ss_pred -----------------cCccccc--------------ccC--------cchHHHH-----------------HHhcCeE
Q 002743 474 -----------------LGQDKDA--------------SIA--------ALPVDEL-----------------IEKADGF 497 (885)
Q Consensus 474 -----------------~~~~~~~--------------~~~--------~~~~~~~-----------------~~~~~v~ 497 (885)
...+.+. .++ +.++.++ -.-+..|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 0000000 000 0001000 0011358
Q ss_pred EeeChhcHHHHHHHHhhcCCEEEEEcCCcCCh--hhhhcCCeeEEecc-------------chHH--HH-----------
Q 002743 498 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA--AR----------- 549 (885)
Q Consensus 498 ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa--~aLk~AdvGIa~g~-------------~td~--a~----------- 549 (885)
..++|+.--++++.+|+.|++|+.+|...|-. --.-+|||+|++.. ++.. |+
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 88999999999999999999999999999843 34578999999842 1111 11
Q ss_pred -----hccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhh
Q 002743 550 -----SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILND 620 (885)
Q Consensus 550 -----~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~i~~d 620 (885)
-+.|+-+.+..+-.|..+|+..|....-+|+.++|.+.......+..+. .+++.+..|+--+++|...|--
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 1223333333445677888889999999999999998887755544443 3444566666667777766654
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.1e-10 Score=116.49 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=111.8
Q ss_pred cCCCcHHHHHHHHHHhhcc-ccccccCCCCCC-----CCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 002743 604 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 675 (885)
Q Consensus 604 ~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 675 (885)
|.|++|+|+||+|+++|.+ ++++++|++++. |++ ++.-.++++...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999988 699999987653 221 222235567777888999999999887766541
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002743 676 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 747 (885)
Q Consensus 676 ~~g~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 747 (885)
+|... ...+....+|+.|..+++++.++.+++|+++.+.+. +.|.+++++++++.++..+ .+|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHhhhc
Confidence 22111 011244689999999999999999999996533221 2355777777766555433 35543 22345
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 748 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 776 (885)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 776 (885)
+.+.++.+|+.+++++++.++..|+.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 67788888888899999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.7e-09 Score=109.90 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=97.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+.-.+.+ . ...++ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~-~--g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD-S--DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEec-C--CeeEC------------eeecCcc
Confidence 57999999999999975 9999999999999999999999642211111100 0 00000 0114578
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHh
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 571 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~g 571 (885)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+++.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998666666655555444 4577777776554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.6e-09 Score=114.86 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=98.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+ ..++.... .-+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g---------~iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG---------DIVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC---------ccCCcc
Confidence 57899999999999999999999999988888999999985311100000000 00000000 002346
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 899988888754 3 5799999999999999999999999 88899999999999988888887665
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-08 Score=105.73 Aligned_cols=145 Identities=25% Similarity=0.332 Sum_probs=102.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCcc-c-c---Cc-----c----------------
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L-L---GQ-----D---------------- 477 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~~-~-~---~~-----~---------------- 477 (885)
+.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .+.. + . +. .
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999853211 0000 0 0 00 0
Q ss_pred --------ccc-----------ccCcchHHHHHHhcC--e-------EEeeChhc--HHHHHHHHhhc----CCEEEEEc
Q 002743 478 --------KDA-----------SIAALPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER----KHICGMTG 523 (885)
Q Consensus 478 --------~~~-----------~~~~~~~~~~~~~~~--v-------~ar~sP~~--K~~iV~~lq~~----g~~V~miG 523 (885)
... ....+++.+.+++.. + +..+.|.. |..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 000 000012222222211 1 22444443 77777777654 34689999
Q ss_pred CCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 524 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 524 DG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
|+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999998888888888774
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-08 Score=106.69 Aligned_cols=129 Identities=21% Similarity=0.284 Sum_probs=94.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe-eCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 502 (885)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +....... +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998541 11100000 000000 00001 123
Q ss_pred hcHHHHHHHHhhcC----CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 503 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 503 ~~K~~iV~~lq~~g----~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
..|.++++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999985 567788899999999998877653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.5e-08 Score=106.72 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=56.4
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666543 2 46899999999999999999999999999999999999998888888888774
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.6e-08 Score=105.63 Aligned_cols=144 Identities=20% Similarity=0.267 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCc-cccC--cc------ccc-------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLG--QD------KDA------------- 480 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~-~~~~--~~------~~~------------- 480 (885)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... .+. .+.. .. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999863211 000 0000 00 000
Q ss_pred --------------ccCc---chHHHHHHhcCe-------EEeeCh--hcHHHHHHHHhhc-C---CEEEEEcCCcCChh
Q 002743 481 --------------SIAA---LPVDELIEKADG-------FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 530 (885)
Q Consensus 481 --------------~~~~---~~~~~~~~~~~v-------~ar~sP--~~K~~iV~~lq~~-g---~~V~miGDG~NDa~ 530 (885)
..+. +.+.+.+.+..+ +..++| .+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 112222222111 123333 4788888887664 2 35899999999999
Q ss_pred hhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 531 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 531 aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
|++.|++|+||+++.+.+++.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987766666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-08 Score=107.42 Aligned_cols=146 Identities=15% Similarity=0.157 Sum_probs=99.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CC---------ccc--------------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS---------SSL-------------------- 473 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~---------~~~-------------------- 473 (885)
.+.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .+ ..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999853211 00 000
Q ss_pred -------cC------ccccc------------------cc------------CcchHHH---HHHh-----cC------e
Q 002743 474 -------LG------QDKDA------------------SI------------AALPVDE---LIEK-----AD------G 496 (885)
Q Consensus 474 -------~~------~~~~~------------------~~------------~~~~~~~---~~~~-----~~------v 496 (885)
.. ..... .. +.+.+++ .+.+ .. -
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 00000 00 0001111 1110 00 0
Q ss_pred EEeeChh--cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCE--EEcCCCcchHHHHH
Q 002743 497 FAGVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 568 (885)
Q Consensus 497 ~ar~sP~--~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADi--vl~~~~~~~i~~~i 568 (885)
+..++|. .|..-++.|.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||. |..+++-.++..++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 2233443 477777777654 2 46999999999999999999999999999999999996 66677777877777
Q ss_pred H
Q 002743 569 L 569 (885)
Q Consensus 569 ~ 569 (885)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 3
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.3e-08 Score=104.44 Aligned_cols=154 Identities=22% Similarity=0.223 Sum_probs=107.7
Q ss_pred EeeccCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------Cccc-------------
Q 002743 417 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSSL------------- 473 (885)
Q Consensus 417 G~i~i~D~-lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~---------~~~~------------- 473 (885)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+++|+...... .+.+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33334444 889999999999999999999999999999999999999641110 0000
Q ss_pred --------------cCcc-----------c-------------------------ccccCcchHHHHH---Hh-----cC
Q 002743 474 --------------LGQD-----------K-------------------------DASIAALPVDELI---EK-----AD 495 (885)
Q Consensus 474 --------------~~~~-----------~-------------------------~~~~~~~~~~~~~---~~-----~~ 495 (885)
...+ . ......+.+.+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0000011112211 11 11
Q ss_pred eE-------EeeCh--hcHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcc
Q 002743 496 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 562 (885)
Q Consensus 496 v~-------ar~sP--~~K~~iV~~lq~~-g~---~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~ 562 (885)
.+ ..+.| .+|..-++.+.+. |. .|+++||+.||.+||+.|+.||||++|.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 3688888888763 44 499999999999999999999999999999999999888888889
Q ss_pred hHHHHHHH
Q 002743 563 VIISAVLT 570 (885)
Q Consensus 563 ~i~~~i~~ 570 (885)
++..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99888854
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-08 Score=90.50 Aligned_cols=65 Identities=31% Similarity=0.448 Sum_probs=54.6
Q ss_pred CCChHHHHHHHhcCC------hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC
Q 002743 306 NQDAIDAAIVGMLAD------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 371 (885)
Q Consensus 306 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 371 (885)
.++|.|.|++.++.. ....+..+++++.+||||.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 468999999987642 3567788999999999999999999998 3345677999999999999974
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=7e-08 Score=104.19 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=54.2
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC--EEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD--ivl~~~~~~~i~~~i~ 569 (885)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|+.|| .|+.+++-.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666543 2 4589999999999999999999999999999999988 6777777777777774
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.4e-08 Score=97.62 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee--ChhcHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 508 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~~K~~i 508 (885)
.+|+.|++.|+++.++|+.....+....+.+|+... |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 1111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcc
Q 002743 509 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 562 (885)
Q Consensus 509 V~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~ 562 (885)
++.++-....|+|+||+.||.+|++.|++++||+++.+.++..||+|...++-.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCC
Confidence 444443345799999999999999999999999999999999999998755433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.71 E-value=1e-07 Score=100.03 Aligned_cols=145 Identities=22% Similarity=0.296 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC-C-ccc-cCc------------------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-S-SSL-LGQ------------------------ 476 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~-~-~~~-~~~------------------------ 476 (885)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+....+. + ..+ ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996432110 0 000 000
Q ss_pred --c-c------c----c---ccCcchHHHHHHhcC---------eEEeeCh--hcHHHHHHHHhhc-C---CEEEEEcCC
Q 002743 477 --D-K------D----A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 525 (885)
Q Consensus 477 --~-~------~----~---~~~~~~~~~~~~~~~---------v~ar~sP--~~K~~iV~~lq~~-g---~~V~miGDG 525 (885)
. . . . ..+.+.+.++.+... .+..+.| .+|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 0 0 000111222222211 1223334 3788888887654 3 569999999
Q ss_pred cCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcch----HHHHH
Q 002743 526 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAV 568 (885)
Q Consensus 526 ~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~----i~~~i 568 (885)
.||.+|++.|++|+||+++.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999988777777 55554
|
catalyze the same reaction as SPP. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.4e-08 Score=95.43 Aligned_cols=97 Identities=28% Similarity=0.403 Sum_probs=79.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHH
Q 002743 432 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 511 (885)
Q Consensus 432 aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~ 511 (885)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 512 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 512 lq~----~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 433 3457999999999999999999999999888899999999998664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.2e-07 Score=98.24 Aligned_cols=118 Identities=19% Similarity=0.169 Sum_probs=85.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe-eC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~s 501 (885)
.+++|++.+.++.++++|.+|+++||-...-+..+++++|++....+.-....+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 688999999999999999999999999999999999999997532211111000 0000 12322 34
Q ss_pred hhcHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEE
Q 002743 502 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555 (885)
Q Consensus 502 P~~K~~iV~~lq~~-g~---~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADiv 555 (885)
.+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+|++.......+ .|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHh
Confidence 47899888666653 54 48999999999999999999999975443333 44433
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.3e-07 Score=109.21 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.7
Q ss_pred EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 518 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 518 ~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++-.++..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888888888774
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.4e-07 Score=100.06 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=101.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCcccc---------------------------
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 474 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~~~~--------------------------- 474 (885)
..+.+.+.++|++++++|+++.+.||.....+..+.+++++..... .+..+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4577999999999999999999999999999999999999862111 000000
Q ss_pred ---------------Ccc--cc------------------------------cccCcchHHHHH-------Hhc------
Q 002743 475 ---------------GQD--KD------------------------------ASIAALPVDELI-------EKA------ 494 (885)
Q Consensus 475 ---------------~~~--~~------------------------------~~~~~~~~~~~~-------~~~------ 494 (885)
... .. ...+.+.++++. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 00 000111111111 110
Q ss_pred -CeEEeeCh--hcHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 495 -DGFAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 495 -~v~ar~sP--~~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
.-+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..+..||++....+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 11223444 4798888888753 3578999999999999999999999999999999999999988776777665
Q ss_pred H
Q 002743 568 V 568 (885)
Q Consensus 568 i 568 (885)
+
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.8e-07 Score=97.90 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=55.5
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+..++.||++..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655443 3 45899999999999999999999999999999999999998888888888774
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.8e-07 Score=92.92 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+.... ........+. .... +....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~--~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDEDG--MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCCC--eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 1110000000 0000 0012378
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCE-EEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADi-vl~~~~~~~i~~~i 568 (885)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887554445555665 44 4455555443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.50 E-value=6e-07 Score=96.36 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=54.9
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
+|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+.+++.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888877764 2469999999999999999999999999999999999999988777666543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.7e-07 Score=92.73 Aligned_cols=98 Identities=27% Similarity=0.326 Sum_probs=78.9
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 510 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 510 (885)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..++|.+.++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999998521 11 1234555555
Q ss_pred HHhh-c---CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 511 RLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 511 ~lq~-~---g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+.+ . ...|+|+||+.||.+|++.|+++++++++.+..+..||+++..++
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 5433 2 346999999999999999999999998888888889999996433
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.8e-06 Score=92.70 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=53.2
Q ss_pred cHHHHHHHHhhc------CCEEEEEcCCcCChhhhhcCCeeEEeccch---HHHHhc--c-CEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~~------g~~V~miGDG~NDa~aLk~AdvGIa~g~~t---d~a~~a--A-Divl~~~~~~~i~~~i~~ 570 (885)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|...++-.++.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 566666665543 456999999999999999999999999987 467875 4 588878888888887753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.5e-07 Score=91.58 Aligned_cols=117 Identities=26% Similarity=0.363 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +.......... ... -+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~g--~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEKG--FIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCCC--eEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997431 11111100000 000 0122234567
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 553 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD 553 (885)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788887776553 34599999999999999999999999765555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00012 Score=84.88 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
|++|++.+.++++++.|+++.++|+-....+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997221 111110 1135577
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 549 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~ 549 (885)
.|.+.++..... +-+.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 786655433222 225789999999999999999999985554433
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.6e-06 Score=88.85 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=87.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC-cccccccCcchHHHHHHhcCeE--Ee
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--AG 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~--ar 499 (885)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.....+.+....+ ....... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~---------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW---------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC---------CCCCcccccc
Confidence 47899999999999999999999999999888888888754333222111111 1100000 000000 00
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHH--hccCEEEcCCCcchHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~--~aADivl~~~~~~~i~~~i 568 (885)
-....|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 01347999999998888889999999999999999999877542111111 1122222 4577666655
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.2e-06 Score=91.61 Aligned_cols=67 Identities=21% Similarity=0.158 Sum_probs=52.1
Q ss_pred cHHHHHHHHhh-------cCCEEEEEcCCcCChhhhhcCCeeEEeccch-HH-----HHhccCEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~-------~g~~V~miGDG~NDa~aLk~AdvGIa~g~~t-d~-----a~~aADivl~~~~~~~i~~~i~~ 570 (885)
+|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-.++.+++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56666666654 3356999999999999999999999998544 21 34479999998888888888754
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.2e-07 Score=90.16 Aligned_cols=92 Identities=24% Similarity=0.295 Sum_probs=70.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh-c-
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 504 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~-~- 504 (885)
+++.+.|+.++++|++++++||+....+..+++.+|++........+.... +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211111110000 11235666665 5
Q ss_pred -HHHHHHHH------hhcCCEEEEEcCCcCChhhhh
Q 002743 505 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 533 (885)
Q Consensus 505 -K~~iV~~l------q~~g~~V~miGDG~NDa~aLk 533 (885)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.3e-06 Score=89.93 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=52.5
Q ss_pred cHHHHHHHHhh----cC-CEEEEEcCCcCChhhhhcCCeeEEeccchHHHH----hcc-CEEE--cCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~----~g-~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~----~aA-Divl--~~~~~~~i~~~i~ 569 (885)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666666654 24 789999999999999999999999999999988 666 6777 4555667777663
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.5e-06 Score=85.11 Aligned_cols=109 Identities=20% Similarity=0.206 Sum_probs=76.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhc
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 504 (885)
+-|++++.++.|++.|.+|.++||--...+..+|.++||+...+..+.+.-.... ...+-... -.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G-k~~gfd~~--------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG-KYLGFDTN--------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC-cccccccC--------CccccCCc
Confidence 4689999999999999999999999999999999999998633222222110000 00000000 00012347
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 505 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 505 K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
|.++++.+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999985 457899999999999999977766664
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=4e-06 Score=79.65 Aligned_cols=98 Identities=27% Similarity=0.447 Sum_probs=81.9
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 510 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 510 (885)
-.|+.+.++||++-++||.+...+..=++++||..- |-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------eec--hHhHHHHHH
Confidence 479999999999999999999999999999998521 111 256777666
Q ss_pred HHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 511 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 511 ~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.|.++ -..|+++||..||.|+|++..+++|+.++.+-.++.||+|+...+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~G 143 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKG 143 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccC
Confidence 66543 356999999999999999999999999999999999999997654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.5e-05 Score=83.51 Aligned_cols=131 Identities=21% Similarity=0.283 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+. ...+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccC------CCcc--cCC
Confidence 378999999999999999999999999999999999999963 2221100000000 0000000 0000 012
Q ss_pred hcHHHHHHHHhhc--CCEEEEEcCCcCChhhhhc--CCeeEEeccc--hHHHHhccCEEEcCCCcchHHH
Q 002743 503 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 503 ~~K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~--AdvGIa~g~~--td~a~~aADivl~~~~~~~i~~ 566 (885)
..|.+.++.+.++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4577888777654 3568999999999999877 5666666532 2334556899984 4555543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=81.68 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=75.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchH-HHHHHhcCeEEe-e
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV-DELIEKADGFAG-V 500 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ar-~ 500 (885)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++ +.+... ++... .-...++..+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 0111 111000 00000 000000000111 1
Q ss_pred ChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 501 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 501 sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999987 8899999999999999999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.2e-05 Score=82.16 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCc-cccCcccccccCcchHHHHHHhcCe--EEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLGQDKDASIAALPVDELIEKADG--FAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~v--~ar 499 (885)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +....+ .+. .+.+......- ..... +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k---------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW---------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec---------cCCccccccc
Confidence 68999999999999999999999999999999999887 643111 000 11111000000 00000 000
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHH--HhccCEEEcCCCcchHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a--~~aADivl~~~~~~~i~~~i 568 (885)
.....|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0013488899998877778999999999999999999977733211222 22233333 4566666554
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.4e-05 Score=80.42 Aligned_cols=101 Identities=22% Similarity=0.273 Sum_probs=70.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+........ +....+.. ..-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~--~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDD--NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECC--CCEEeCcc--------CCcccCCcc
Confidence 368999999999999999999999999999999999999853 1111100000 00000000 000124467
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcC
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKA 535 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~A 535 (885)
.|.+.++.++++ ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=6e-05 Score=78.99 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=88.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC-
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 501 (885)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ...+...+ +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 468899999999999999999999999999999999999985321 11111000 11112
Q ss_pred -hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe-eEEecc----chHHHHhccCEEEcCCCcchHHHHHHH
Q 002743 502 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 502 -P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv-GIa~g~----~td~a~~aADivl~~~~~~~i~~~i~~ 570 (885)
|+--..+.+.++.....+.|+||+.||+.|.++|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222244555555556679999999999999999999 666642 2344455788888 668888777654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.5e-05 Score=79.39 Aligned_cols=109 Identities=16% Similarity=0.089 Sum_probs=77.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..- .........+ ...+++.. --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCCcc---------CCCCC
Confidence 356899999999999999999999999999999999999998532 1111110000 00000000 01134
Q ss_pred hhcHHHHHHHHhh-cC---CEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 502 PEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 502 P~~K~~iV~~lq~-~g---~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888877654 33 26889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00012 Score=78.10 Aligned_cols=147 Identities=16% Similarity=0.151 Sum_probs=96.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--C-CCcc-c-cCc---------------------
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-PSSS-L-LGQ--------------------- 476 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~--~-~~~~-~-~~~--------------------- 476 (885)
.+..|...++++++++.|+.++..||......+.+.+++++.... + .+.. + ..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999999875431 1 0000 0 000
Q ss_pred -------------c-ccc-------ccCcch----H---HHHHHhc--Ce---EE-----eeCh--hcHHHHHHHHhhc-
Q 002743 477 -------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER- 515 (885)
Q Consensus 477 -------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~a-----r~sP--~~K~~iV~~lq~~- 515 (885)
. ... ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000 000001 1 1112111 11 11 3444 4788888888764
Q ss_pred ---CCEEEEEcCCcCChhhhhc-CCeeEEeccchHHHHhccC-------EEEcCCCcchHHHHHH
Q 002743 516 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 569 (885)
Q Consensus 516 ---g~~V~miGDG~NDa~aLk~-AdvGIa~g~~td~a~~aAD-------ivl~~~~~~~i~~~i~ 569 (885)
...|.++||+.||.+|++. ++.|++|+++.+..++.++ ++.....-.++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 7799999999988886543 5555555667777664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00011 Score=76.98 Aligned_cols=126 Identities=18% Similarity=0.199 Sum_probs=91.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..... .+.+.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 45678999999999999999999999999999999999999965321 11110000 011224
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCC---eeEEecc--chHHHHhccCEEEcCCCcchHHHHH
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad---vGIa~g~--~td~a~~aADivl~~~~~~~i~~~i 568 (885)
|+......+.+....+.++||||..||+.|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55666666666655457999999999999999998 5666663 4566777799999 5566666554
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.74 E-value=5.7e-05 Score=71.52 Aligned_cols=118 Identities=15% Similarity=0.055 Sum_probs=76.3
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 420 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 420 ~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+......... .............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYY-PKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhc-ccccccccccccccCC
Confidence 34568999999999999999999999999999999999999987321 01111000000000 0000000011112334
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhc-CCeeEE
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 540 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~-AdvGIa 540 (885)
-.|+.+..+.+.+......+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666667777776666789999999999999998 555554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00016 Score=74.86 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+++++|++.|+++.++||.....+...-+.+|+.... ...+...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888889885321 011100000 01112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Ee--c--cchHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~--g--~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.++-....++|+||+.+|..+-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 233444445444567999999999999999999863 33 3 22344567899998 4555555543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00022 Score=75.02 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
.+..-+++.++|++|++.|+++++.||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00054 Score=78.46 Aligned_cols=141 Identities=18% Similarity=0.154 Sum_probs=89.6
Q ss_pred chHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC---CCc--c-----c-----------------------
Q 002743 428 DSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---PSS--S-----L----------------------- 473 (885)
Q Consensus 428 ~~~~aI-~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~---~~~--~-----~----------------------- 473 (885)
...+++ +++++.|+..+..||..+.....+.++.++..+.+ .+. + +
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345555 88999999999999999999999999998765411 000 0 0
Q ss_pred c---C----ccccc-------ccCcch-------HHHHHHh----cC------eEEeeChh--cHHHHHHHHhhc----C
Q 002743 474 L---G----QDKDA-------SIAALP-------VDELIEK----AD------GFAGVFPE--HKYEIVKRLQER----K 516 (885)
Q Consensus 474 ~---~----~~~~~-------~~~~~~-------~~~~~~~----~~------v~ar~sP~--~K~~iV~~lq~~----g 516 (885)
. . .+... ..+.+. +.+.+.+ +. -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 0 00000 000101 1111111 11 12345554 498888888664 2
Q ss_pred ---CEEEEEcCCcCChhhhhcCC-eeEEeccchHHHHhcc--------CEEEc-CCCcchHHHHH
Q 002743 517 ---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIISAV 568 (885)
Q Consensus 517 ---~~V~miGDG~NDa~aLk~Ad-vGIa~g~~td~a~~aA--------Divl~-~~~~~~i~~~i 568 (885)
..|.++||+.||.+||+.|+ .||+|+++.+..++.+ +++.. +++-.+|.+++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al 256 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAI 256 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHH
Confidence 47899999999999999999 6999999999888643 55544 33455666655
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00073 Score=72.90 Aligned_cols=139 Identities=12% Similarity=0.115 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCC--C-C---CC--CCc----ccc----------------
Q 002743 424 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 474 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~-aGI~v~mlTGD~~~tA~~ia~~lGi~--~-~---~~--~~~----~~~---------------- 474 (885)
.+-+++.++|++|++ .|+.+.++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999988888766642 1 0 00 000 000
Q ss_pred ---Cccccc----------ccC--cchHHHHH----HhcC--------eEEeeChh--cHHHHHHHHhhc----CCEEEE
Q 002743 475 ---GQDKDA----------SIA--ALPVDELI----EKAD--------GFAGVFPE--HKYEIVKRLQER----KHICGM 521 (885)
Q Consensus 475 ---~~~~~~----------~~~--~~~~~~~~----~~~~--------v~ar~sP~--~K~~iV~~lq~~----g~~V~m 521 (885)
+...+. ..+ .+.+.++. +... .+-.+.|. +|..-++.+.+. ...+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 000 11111111 1111 22344443 788888776654 357899
Q ss_pred EcCCcCChhhhhcC----CeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 522 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 522 iGDG~NDa~aLk~A----dvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999765 457788854 44444333
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00014 Score=77.12 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=57.0
Q ss_pred hcHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC----EEEcCCCcchHHHHHHH
Q 002743 503 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 570 (885)
Q Consensus 503 ~~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD----ivl~~~~~~~i~~~i~~ 570 (885)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..++.|| +|...++-.++.+++.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3788888888664 3 3588999999999999999999999999999999999 77766666778877743
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00062 Score=73.75 Aligned_cols=125 Identities=15% Similarity=0.138 Sum_probs=80.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++.|++.++++.|++.|+++.++||-....+..+.++.|+.... ...+.+.+.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999988888888888874321 0111000000 001111
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe-eEEecc----chHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv-GIa~g~----~td~a~~aADivl~~~~~~~i~~~i 568 (885)
+-=..+.+.+.-....|.|+||+.||..|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11123333333334679999999999999999997 355532 2233455799998 4566665443
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00068 Score=70.55 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...+...+.. ...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999999999999999985321 1111100000 0111233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Ee--cc-c-hHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD-A-TDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~--g~-~-td~a~~aADivl~~~~~~~i~~~i 568 (885)
--.++.+.++-....++|+||+.+|..|-++|++-. ++ +. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 333444444444567899999999999999999842 33 31 1 223445688887 4577766544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0014 Score=68.51 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
+.+.++|++++++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00068 Score=70.31 Aligned_cols=119 Identities=16% Similarity=0.156 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.++++.|++.|+++.++|+-....+..+.++.|+.... ...+ +.+. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLI-GGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEE-ecCC------------------CCCCCCC
Confidence 57899999999999999999999999999999999999985321 1111 1100 001112
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE-e--ccc--hHHHHhccCEEEcCCCcchHH
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa-~--g~~--td~a~~aADivl~~~~~~~i~ 565 (885)
+-=....+.+.-....++|+||..||..|.++|++-.. + |.+ .......+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 21123333333334569999999999999999998744 4 222 123334688887 4455444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0015 Score=68.39 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=76.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-+|.||+.++++.|++.|+++.++|+........+.+++|+.... ...+.+.+. ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 367899999999999999999999999999999999999985432 111111000 0011122
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-ccc---hHHHHhccCEEEcCCCcchHH
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g~~---td~a~~aADivl~~~~~~~i~ 565 (885)
+-=..+.+.+.-....|+|+||..||+.+-++|++.... ..+ .+.-...+|+++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 211122222222235689999999999999999987543 322 222233577777 3454443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0041 Score=66.65 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
..-+.+.++|++|++.||.+++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0061 Score=65.38 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=84.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe---
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 499 (885)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+.........+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCC-----------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853211 110000000000 00111
Q ss_pred --eChhcHHHHHHH-----Hh--hcCCEEEEEcCCcCChhhhhcC---CeeEEec--c-c----hHHHHhccCEEEcCCC
Q 002743 500 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPG 560 (885)
Q Consensus 500 --~sP~~K~~iV~~-----lq--~~g~~V~miGDG~NDa~aLk~A---dvGIa~g--~-~----td~a~~aADivl~~~~ 560 (885)
+....|.+.+.. ++ .....|.|+|||.||++|..-. +--+.+| + - -+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011346654432 22 2235688999999999996544 2223333 2 1 2334678899999998
Q ss_pred cchHHHHH
Q 002743 561 LSVIISAV 568 (885)
Q Consensus 561 ~~~i~~~i 568 (885)
--.++.+|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 77777666
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0021 Score=67.05 Aligned_cols=124 Identities=17% Similarity=0.166 Sum_probs=79.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
.++.||+.+.++.|++.|+++.++||-....+..+-+.+|+.. +.. ...+...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999999999862 111 1111111100 01111
Q ss_pred hhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeE--Eeccch----HHHHhccCEEEcCCCcchHHH
Q 002743 502 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 502 P~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGI--a~g~~t----d~a~~aADivl~~~~~~~i~~ 566 (885)
|+-=....+.+.-. ...+.|+||+.+|+.+-++|++.. ++..|. ......+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22112223333322 357999999999999999999986 343221 12234578777 44555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0024 Score=67.26 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 111111000 01112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc----h-HHHHhccCEEEcCCCcchHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA----T-DAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~----t-d~a~~aADivl~~~~~~~i~~~ 567 (885)
-=..+.+.+.-....+.|+||+.||..|-++|++- |++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 33445555555566799999999999999999987 344321 1 12334689988 445555443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0038 Score=66.77 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+..... ..++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467999999999999999999999999999999889888854311 1111111100 1111222
Q ss_pred cHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=....+.+.-. .+.+.|+||..+|..|=++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 222333333321 34599999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0049 Score=73.18 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.3
Q ss_pred EeeccCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 417 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~-lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3357899999999999999999999999999999999974
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0041 Score=64.66 Aligned_cols=108 Identities=13% Similarity=0.041 Sum_probs=74.3
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI-~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+-+.+...++. . .-..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0011111111000000 0 0123556
Q ss_pred hcHHHHHHHH-hhcCCEEEEEcCCcCChhhhhcCCeeEEeccc
Q 002743 503 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 544 (885)
Q Consensus 503 ~~K~~iV~~l-q~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~ 544 (885)
++|.+-++.. .......-+=||..||.|||+.|+-.++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8888877654 33344566889999999999999999999743
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0078 Score=65.14 Aligned_cols=121 Identities=13% Similarity=0.075 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... . .++.+.+ +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCC------------------CC--CCHH
Confidence 56799999999999999999999999999999999999985421 0 1111100 00 0111
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE-eccc--hH--HHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TD--AARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa-~g~~--td--~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1112222232234569999999999999999998633 3222 22 3344689998 5577776654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0041 Score=64.60 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=73.4
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~-~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++|++.++|+ .+++.|++++++|+=....+..+++..|+... .. +.+-+.+.. ++.. + .=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~-~i~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LN-LIASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---Cc-EEEEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78889999999999999999999998655221 01 111111100 0000 0 0123556
Q ss_pred hcHHHHHHHH-hhcCCEEEEEcCCcCChhhhhcCCeeEEecc
Q 002743 503 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 543 (885)
Q Consensus 503 ~~K~~iV~~l-q~~g~~V~miGDG~NDa~aLk~AdvGIa~g~ 543 (885)
++|.+-++.. ......+-+=||..||.|||+.||-.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888877654 3233455688999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0069 Score=65.41 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..++...+ .....|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~-------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDD-------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCc-------------------CCCCCC-
Confidence 567999999999999999999999999888877777777643211 11111110 001112
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvG 538 (885)
+..-+.+.+++. ...+.|+||+.+|+.|-++|++-
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 112233334433 25699999999999999999973
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0068 Score=65.13 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999985321 1122111100 0111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe-ccchHHHHhccCEEEcCCCcchH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV-ADATDAARSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~-g~~td~a~~aADivl~~~~~~~i 564 (885)
-=....+.+.-....++|+||..+|+.|-++|++- |++ +.........+|+++. +++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 22333444444456699999999999999999985 344 3222223335788873 34443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0048 Score=63.60 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 462 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG 462 (885)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0021 Score=65.95 Aligned_cols=94 Identities=18% Similarity=0.096 Sum_probs=67.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
.+++.++++++++.|++.|+++.++||-....+..+-+++|+.... ...+...+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557778899999999999999999999999999999999985321 11111100 111334
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcC
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 535 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~A 535 (885)
|+--..+.+.+.-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5444555566655566799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.022 Score=70.53 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=46.1
Q ss_pred hcHHHHHHHHhhc--CCEEEEEcCCcCChhhhhcC---CeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 ~~K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~A---dvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
-+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +.+|++.|.++ ..+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 4799999888874 35799999999999999996 588888874 46888999654 4444443
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0075 Score=70.50 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 67899999999999999999999999999999999999985421 1111111100 011232
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEecc--chHHHHhccCEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~--~td~a~~aADivl~~~~~~~i~~~i~~ 570 (885)
-=....+.++ ...+.|+||..+|+.|-++|++- |++.. +.+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 34699999999999999999984 55532 2222234589888 557777666543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.017 Score=61.65 Aligned_cols=117 Identities=12% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 56789999999999999999999999999999999999985421 1112111100 1112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Eeccc---hHHHHhccCEEEcCC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA---TDAARSASDIVLTEP 559 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~---td~a~~aADivl~~~ 559 (885)
-=....+.++-....+.|+||..+|..|=++|++-. ++..+ .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 334444555444567999999999999999998853 33322 122234688888543
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=60.78 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+... ...+...+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHh-----------------cCCCCCcH
Confidence 5789999999999999999999999887766666666776321 111111000 00111222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccch-HHHHhccCEEEcC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLTE 558 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~t-d~a~~aADivl~~ 558 (885)
-=....+.+.-....+.|+||..+|+.+-++|++- |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22333344433456799999999999999999984 6664332 2233457887743
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.006 Score=64.32 Aligned_cols=92 Identities=21% Similarity=0.231 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.|.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.+.. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQ 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CC
Confidence 34556999999999999999999997 667999999999995311 111111110 00
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 541 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~ 541 (885)
-.| +|. ..+++.| .+.|+||..||..+-++|++- |++
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 112 233 3445555 478999999999999998865 444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0092 Score=62.24 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998888788888888874321 11111110 011123
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCee-EEec
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA 542 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~-NDa~aLk~AdvG-Ia~g 542 (885)
+-=..+.+.+.-....+.|+||.. +|+.+-++|++- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 211223333333345799999998 999999999874 5554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.021 Score=60.85 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=45.8
Q ss_pred hcHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHH-----HH---hccCEEE-cCCCcchHHHHHH
Q 002743 503 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA-----AR---SASDIVL-TEPGLSVIISAVL 569 (885)
Q Consensus 503 ~~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~-----a~---~aADivl-~~~~~~~i~~~i~ 569 (885)
..|...|+.|+++ + +.|.++||+.||.+||..++-||.++++.+. .. ....+.. ..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999998875 2 3567799999999999999999999988776 22 2223333 3445556777664
Q ss_pred H
Q 002743 570 T 570 (885)
Q Consensus 570 ~ 570 (885)
|
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.009 Score=62.95 Aligned_cols=90 Identities=22% Similarity=0.273 Sum_probs=63.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.|.|++.+.++.+++.|+++.++||. ...++..+.+..|++...+.... ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi------------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI------------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE------------------------EcC
Confidence 46788999999999999999999995 35689999999999522111111 111
Q ss_pred eC--hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe
Q 002743 500 VF--PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 541 (885)
Q Consensus 500 ~s--P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~ 541 (885)
-+ -.+|... +++.| .+.|+||..+|..+-++|++- |.+
T Consensus 170 d~~~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 11 1345543 34444 488999999999999999875 444
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.039 Score=55.91 Aligned_cols=141 Identities=19% Similarity=0.223 Sum_probs=92.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc-------cCcc---------cccccCcchHH
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL-------LGQD---------KDASIAALPVD 488 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~-------~~~~---------~~~~~~~~~~~ 488 (885)
+-||+.++.+.+++. ...+++|---..-+..+|..+|++........+ ...+ .....+++
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge--- 159 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE--- 159 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHH---
Confidence 458999999999876 456666667788899999999985422111111 0000 00011122
Q ss_pred HHHHhc-CeEEeeChhcHH---------------HHHHHHhhc---CCEEEEEcCCcCChhhhhcCC-e-eEEec-cchH
Q 002743 489 ELIEKA-DGFAGVFPEHKY---------------EIVKRLQER---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATD 546 (885)
Q Consensus 489 ~~~~~~-~v~ar~sP~~K~---------------~iV~~lq~~---g~~V~miGDG~NDa~aLk~Ad-v-GIa~g-~~td 546 (885)
++.++. .+|.|..|..-- ++++.+.+. ....+++||.+.|..||+.+. - |+|+. +|.+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 257888876544 444444332 345688999999999999875 2 48887 8888
Q ss_pred HHHhccCEEEcCCCcchHHHHHH
Q 002743 547 AARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 547 ~a~~aADivl~~~~~~~i~~~i~ 569 (885)
-|..-||+.+..++.......|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999998888777664
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.016 Score=63.57 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=76.0
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
..+++.|++.+++++|++.|+++.++||.....+..+.+.+|+....+. .+.+.+. ....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5689999999999999999999999999999999999999988531111 1111110 00000000 01234
Q ss_pred ChhcHHHHHHHHhh-cCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 501 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 501 sP~~K~~iV~~lq~-~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
.|+-|....+.+-. .-..++|+||..||+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777776543 3478999999999999999999873
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.016 Score=57.01 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
.++|+-++.++.+++.++.++++|+--.-....+-.+++=...++....+.... ..+....-.++-. .....--
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCC
Confidence 468999999999999999999999887666666655555111111111110000 0000000000000 0122335
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
+|...|+.|++..+.+.|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988777666554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.019 Score=58.92 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+++++|++.|+++.++|+-+......+.+++|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 57899999999999999999999998888888888889974321 11111100 0011222
Q ss_pred c--HHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 H--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~--K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
. =..+.+.+.-....+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 1 1233334433446789999999999998888875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.036 Score=56.01 Aligned_cols=127 Identities=20% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~---------------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++.||+.+++++|++.|+++.++|..... ....+-++.|+... ..+...... .++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----EDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----CCC--
Confidence 36799999999999999999999987521 11122233444100 000000000 000
Q ss_pred HHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-EeccchH---HHHhcc--CEEEcCCCcc
Q 002743 489 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 562 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~td---~a~~aA--Divl~~~~~~ 562 (885)
.....-.|+--....+.+.-..+.+.|+||..+|+.+-++|++.. ++..|.. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233333444445444567999999999999999999752 3333321 112234 7777 4466
Q ss_pred hHHHHH
Q 002743 563 VIISAV 568 (885)
Q Consensus 563 ~i~~~i 568 (885)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 665554
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.025 Score=61.71 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=70.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.++.|++.|+++.++|+-.......+-+..+.... ... ..+.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER-AQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc-cCceEEEecccc-----------------CCCCCCH
Confidence 5789999999999999999999999887766665554432110 000 01100000 0111122
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-ccch--HHHHhccCEEEcC
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARSASDIVLTE 558 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g~~t--d~a~~aADivl~~ 558 (885)
+-=..+.+.+.-....++|+||+.+|+.|-++|++.... ..|. .-....+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 222334444444456799999999999999999987443 2321 1112358888843
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.029 Score=53.47 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=62.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~--------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (885)
-++.|++.++++.|+++|+++.++|+.. ........+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 67778888888874210 00000 0
Q ss_pred CeEEeeChhcHHHHHHHHh-hcCCEEEEEcC-CcCChhhhhcCCee
Q 002743 495 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADIG 538 (885)
Q Consensus 495 ~v~ar~sP~~K~~iV~~lq-~~g~~V~miGD-G~NDa~aLk~AdvG 538 (885)
+..-.|+-=..+.+.++ -....++|+|| -.+|..+-++|++=
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01111222233444442 34567999999 59999999888753
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.034 Score=62.56 Aligned_cols=120 Identities=18% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1111111100 0011222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-EeccchHHH-HhccCEEEcCCCcchH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~td~a-~~aADivl~~~~~~~i 564 (885)
-=....+.++-....++|+||..+|+.|-+.|++-. ++..+.+.. ...+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 223444555545677999999999999999999863 334333222 23588887 444443
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.016 Score=58.51 Aligned_cols=94 Identities=11% Similarity=0.023 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 45567778874321 111111000 01111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=....+.+.-....+.|+||..+|+.+-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11222333322334689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.009 Score=59.10 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=67.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++.|++.+.+++|++.|++++++|+-.........+++|+... ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 46789999999999999999999999999999999999998621 11222111110 000111
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
+-=..+.+.++-....+.++||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222334444444456799999999999999988764
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.031 Score=58.24 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 999999998888888888999985421 111111100 001232
Q ss_pred cH--HHHHHHH-hhcCCEEEEEcCCc-CChhhhhcCCe-eEEecc--chHHHHhccCEEEcCCCcchHH
Q 002743 504 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 504 ~K--~~iV~~l-q~~g~~V~miGDG~-NDa~aLk~Adv-GIa~g~--~td~a~~aADivl~~~~~~~i~ 565 (885)
.. ....+.+ .-....+.|+||.. +|+.+=+++++ +|.+.. .+......+|.++ +++..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~ 221 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELY 221 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHH
Confidence 21 2333333 32345699999998 89999999997 344432 2212223466666 3454444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.012 Score=62.70 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=49.1
Q ss_pred eeCh--hcHHHHHHHHhhcCCEEEEEcC----CcCChhhhhcC-CeeEEeccchHHHHhccCEEE
Q 002743 499 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 556 (885)
Q Consensus 499 r~sP--~~K~~iV~~lq~~g~~V~miGD----G~NDa~aLk~A-dvGIa~g~~td~a~~aADivl 556 (885)
.+.| -+|..-++.|.+....|+++|| |-||.+||+.| -.|++++++++..+..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999888788999999 99999999987 788999999999998776554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.03 Score=58.78 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+.... ..++.+.+ +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 67899999999999999999999998888888777778874311 11111110 001112
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee--EEecc
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 543 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG--Ia~g~ 543 (885)
+-=....+.+.-....++|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222233333345699999999999999999995 45543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.2 Score=56.37 Aligned_cols=68 Identities=25% Similarity=0.229 Sum_probs=48.4
Q ss_pred EEeeChh---cHHHHHHHHhhc-C-----C-EEEEEcCCcCChhhhhc-----CCeeEEeccchHHHHhccCEEEcCCCc
Q 002743 497 FAGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGL 561 (885)
Q Consensus 497 ~ar~sP~---~K~~iV~~lq~~-g-----~-~V~miGDG~NDa~aLk~-----AdvGIa~g~~td~a~~aADivl~~~~~ 561 (885)
+-++.|. +|...|+.+.+. | . .+.++||+.||..|++. +++||+|++|.+ ...|++.|.+ -
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~--~t~A~y~L~d--p 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK--ESNAFYSLRD--P 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC--CccceEEcCC--H
Confidence 3456664 898888887654 2 1 35899999999999996 689999987654 2367888844 4
Q ss_pred chHHHHH
Q 002743 562 SVIISAV 568 (885)
Q Consensus 562 ~~i~~~i 568 (885)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 5555444
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.042 Score=55.20 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=58.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCe
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 496 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~--------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 496 (885)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-.. .....+.+. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6899999999999999999999987531 1222233445432100 000000000 0
Q ss_pred EEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 497 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
...-.|+-=..+.+.+.-..+.+.|+||..+|+.+=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11112222244445454444679999999999999999998643
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.046 Score=54.82 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874311 111111000 01111222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 537 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv 537 (885)
-=..+.+.+.-....+.|+||...|+.+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233444444445679999999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.11 Score=51.35 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=65.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
+|...|+++++++++++.|+++..+||.....+. ....++ | ++. ..+...+ +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-----g~li~~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-----GPVLLSP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-----ceEEEcC------Ccchhh-hhc
Confidence 4778899999999999999999999999987774 444442 2 321 0110000 000000 000
Q ss_pred cCeEEeeChh-cHHHHHHHHhh-----cCCEEEEEcCCcCChhhhhcCCee
Q 002743 494 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 494 ~~v~ar~sP~-~K~~iV~~lq~-----~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
.+. .-.|+ .|.+.++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 12233 48888888876 356788899999999999877653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.034 Score=56.13 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-++.||+.++++.|++.|+++.++|+- ..+..+-++.|+.... ..++...+ ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 368899999999999999999999986 5567777788874321 11110000 001122
Q ss_pred hcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 503 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 503 ~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
... ..+.+.+.-....+.|+||..+|+.+-++|++-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211 122233322345688999999999999998874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.077 Score=55.46 Aligned_cols=121 Identities=14% Similarity=0.128 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ..++...+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-------------------CCCCCC
Confidence 46899999999999 68999999998888888777788874311 111111000 001222
Q ss_pred --cHHHHHHHHhhc-CCEEEEEcCCc-CChhhhhcCCee-EEec-cchH-HHHhccCEEEcCCCcchHHHHH
Q 002743 504 --HKYEIVKRLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 --~K~~iV~~lq~~-g~~V~miGDG~-NDa~aLk~AdvG-Ia~g-~~td-~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.+.-. ...+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112233333321 24699999998 799999999985 4444 2221 1112467777 4466655543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.068 Score=60.80 Aligned_cols=114 Identities=20% Similarity=0.163 Sum_probs=70.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998877766554 56763211 111110000 0111112
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc--hHHHHhccCEEE
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVL 556 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~--td~a~~aADivl 556 (885)
+-=..+.+.+.-..+.|.|+||+.+|+.+-++|++. |++..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222333344443456799999999999999999987 344432 222334566665
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.23 Score=48.47 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=76.6
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 382 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 382 ~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
..+.+.++|.+.+.+-..+ +++..=. ...-|++.+=+++++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd~--~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWDN--PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceecccC--CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775443 4443322 335578889999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee-ChhcHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhcCC
Q 002743 462 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-FPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 536 (885)
Q Consensus 462 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-sP~~K~~iV~~lq~~---g~~V~miGDG~-NDa~aLk~Ad 536 (885)
|++- ..+. .|-- ..+-+++++. -..|+|+||-. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9852 1111 1222 2445555554 56799999986 5776655554
Q ss_pred e
Q 002743 537 I 537 (885)
Q Consensus 537 v 537 (885)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 4
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.11 Score=52.04 Aligned_cols=111 Identities=6% Similarity=-0.038 Sum_probs=70.1
Q ss_pred eeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 415 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 415 llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD-~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
......-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... -..+.+.++
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd- 99 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD- 99 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-
Confidence 44444455578999999999999999999999965 8888888888888741000 000001100
Q ss_pred cCeEEeeChhcH--HHHHHHHhhc------CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 494 ADGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 494 ~~v~ar~sP~~K--~~iV~~lq~~------g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
..+.+.-.+..| .++.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 100 ~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 001111111112 2344544432 35799999999999999988876543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.071 Score=51.97 Aligned_cols=97 Identities=20% Similarity=0.154 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++.||+.++++.|++.|+++.++|.... .....+.+++|+.....-.......+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADN---------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCC----------
Confidence 4789999999999999999999998652 345566677787421000000000000
Q ss_pred HHHHhcCeEEeeChhcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 489 ELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
...+ .|+-+ ..+++.+.-..+.|.|+||...|+.+-+.+++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 22211 222233332345699999999999998888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.17 Score=50.88 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.058 Score=52.68 Aligned_cols=91 Identities=22% Similarity=0.243 Sum_probs=56.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . ...+ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEE-ecC-----------------CCCCCcCHH
Confidence 34579999999999999999999999988888777765 3221 1 1111 100 001111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad 536 (885)
-=..+.+.+.-.. .++|+||..+|+.|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 1122223333234 7999999999998877763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.12 Score=53.16 Aligned_cols=94 Identities=15% Similarity=0.083 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999975543 46666777774211 111100000 00011121
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCe
Q 002743 504 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI 537 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~-NDa~aLk~Adv 537 (885)
-=..+.+.+.-....++|+||+. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222333333346799999997 89998888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.13 Score=51.45 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~-~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..+-|++.+++++|++.|+++.++|+.+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3578999999999999999999999987 5677777788876310 00011
Q ss_pred hhcH--HHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCee
Q 002743 502 PEHK--YEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 538 (885)
Q Consensus 502 P~~K--~~iV~~lq~~g~~V~miGDG~-NDa~aLk~AdvG 538 (885)
|... ..+.+.+.-....++|+||.. .|..+=++|++-
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2111 122222222345699999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.36 Score=50.73 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCC---CCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 424 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTN---MYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 424 ~lr~~~~~aI~~l--~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
|+.|+.++.++.+ ++.|+.+.++|--|..--..+-+.-|+... ++.+......+. .+.-.+.. ...|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G--~l~v~pyh-----~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG--RLRVRPYH-----SHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc--eEEEeCcc-----CCCCC
Confidence 6678999999999 568999999999888888888888888532 111111100000 00000000 02244
Q ss_pred eeCh-hcHHHHHHHHhhc----C---CEEEEEcCCcCChhh
Q 002743 499 GVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDAPA 531 (885)
Q Consensus 499 r~sP-~~K~~iV~~lq~~----g---~~V~miGDG~NDa~a 531 (885)
++.| -=|..+++.+++. | ..|.++|||.||--.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5555 3799999998875 4 689999999999643
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.12 Score=50.52 Aligned_cols=93 Identities=16% Similarity=0.031 Sum_probs=63.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-++|||+.+.++.|+ .++++.+.|.-....+..+-+.+|+.... ...++...+ +.+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcc-------------------ccccCC
Confidence 357999999999999 57999999999999999999999874311 111111111 011122
Q ss_pred hcHHHHHHHHh---hcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 503 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 503 ~~K~~iV~~lq---~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
. +.+.++ .....|.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 333333 345689999999999998877765554
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.13 Score=51.04 Aligned_cols=97 Identities=12% Similarity=0.058 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++-|++.+++++|++.|+++.++|.-. ......+-+.+|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666777641 0 011000000 00
Q ss_pred HHHHhcCeEEeeChhcHHHHHHHH-hh---cCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 489 ELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K~~iV~~l-q~---~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
.... ..|. .++++.+ ++ ....+.|+||+.+|+.+-++|++-..
T Consensus 98 ------~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 1122 2222222 22 23458999999999999999988643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.55 Score=50.47 Aligned_cols=86 Identities=14% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~t---A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
..++-|++.+.++.+++.|+++.++|+..... ....-++.|++... ... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d~-----------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EEH-----------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cce-----------------------EEe
Confidence 45678999999999999999999999976433 33445667875321 011 122
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhh
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 532 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aL 532 (885)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2222345555566666556799999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.18 Score=53.63 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=47.1
Q ss_pred eeChhcHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcC--------CeeEEeccchHHHHhccCEEEcCCCcchHHH
Q 002743 499 GVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~A--------dvGIa~g~~td~a~~aADivl~~~~~~~i~~ 566 (885)
+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 33456788877776654 34789999999999999999 4788885342 4567899884 4555544
Q ss_pred HH
Q 002743 567 AV 568 (885)
Q Consensus 567 ~i 568 (885)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.26 Score=55.08 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=57.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchH
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 487 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 487 (885)
-+|.|++.+++++|+++|+++.++|+= ....+..+.+..|+.. ...+.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 367899999999999999999999982 1233455666666631 0111000000 00
Q ss_pred HHHHHhcCeEEeeChhcHHHHHHHHhh----cCCEEEEEcCCcCChhhhhcCCee
Q 002743 488 DELIEKADGFAGVFPEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 488 ~~~~~~~~v~ar~sP~~K~~iV~~lq~----~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
...+| .| |-+++..+.+ ....+.|+||+.+|..+-+.|++-
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00011 22 2233333222 246799999999999998888775
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.22 Score=52.02 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~-ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.|+.|++.|+++.++||-....... ..+..|+... . ...+.+.+.+ + ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-M-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-C-CEEEECChhh-------c--------cCCCCCc
Confidence 567999999999999999999999977543322 2222233210 0 0111110000 0 0001112
Q ss_pred hcHHHHHHHHh---hcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 503 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 503 ~~K~~iV~~lq---~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
+-=...++.+. -....|.|+||...|+.|-++|++-.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 21123334443 22467999999999999999999863
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.58 Score=60.22 Aligned_cols=125 Identities=15% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
.+.||+.+.++.|+++|+++.++|+-....+...-++.|+..... ...+...+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCC
Confidence 357999999999999999999999998888888888888852111 11111110 111122
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc---hHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~---td~a~~aADivl~~~~~~~i~~~i 568 (885)
+-=.+..+.+.-....+.|+||..+|+.|-++|++- |++..+ .+.....+|+++.+..-.++.+.+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 222333444444456799999999999999999984 455322 233445788888554333333333
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.73 Score=48.88 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=59.3
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~--~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (885)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+. ...++... ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~---------~~------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSG---------EI------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccH---------HH-------
Confidence 555666788999999999999999999999995554433 455778875311 11111100 00
Q ss_pred CeEEeeChhcHHHHHHHHhh---cCCEEEEEcCCcCChhhhhcCC
Q 002743 495 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 495 ~v~ar~sP~~K~~iV~~lq~---~g~~V~miGDG~NDa~aLk~Ad 536 (885)
...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 ---------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 ---------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01112222232 2467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.88 E-value=3 Score=46.76 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=34.4
Q ss_pred eeeEeeccCC--CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002743 414 QLVGLLPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 458 (885)
Q Consensus 414 ~llG~i~i~D--~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia 458 (885)
+|+-++.-.| .+-++..++|++|. .|+.+.++||..........
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5554444333 47789999999999 78999999999999888773
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.81 Score=47.90 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=54.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~i---a~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
-|+-|++.+.++.+++.|++|+++||........+ -++.|++.. ..-.+.+.+ + .. .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~-d-----~~------------~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLE-D-----SN------------K 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCC-C-----CC------------c
Confidence 47789999999999999999999999987542222 244566421 111111100 0 00 0
Q ss_pred eChhcHHHHHHHHhhcCC-EEEEEcCCcCCh
Q 002743 500 VFPEHKYEIVKRLQERKH-ICGMTGDGVNDA 529 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~-~V~miGDG~NDa 529 (885)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 001226677767777765 677899998885
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.56 Score=44.53 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 462 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD-~~~tA~~ia~~lG 462 (885)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.47 E-value=1.3 Score=45.21 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 428 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
.+...+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998877777888888885
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.93 Score=56.77 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=31.3
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 002743 424 PPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 424 ~lr~~~~~aI~~l-~~aGI~v~mlTGD~~~tA~~ia~~ 460 (885)
.|-++..+++++| ++.|+.|.++||....+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667999999997 778999999999999887776644
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.31 Score=50.93 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=63.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
+-++.||+.+++++|+++|+++.++|.......+.+-+..+ +... + +..+. ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEEE-eCccc
Confidence 35789999999999999999999999988776666555442 2110 0 00000 00111
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222344444444446799999999999999999986433
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.15 E-value=0.7 Score=46.06 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHhCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 464 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~------------tA~~ia~~lGi~ 464 (885)
+-||+.+++++|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 4489999999999999999999964431 345667778873
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.83 E-value=0.27 Score=50.79 Aligned_cols=97 Identities=13% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~t--A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+. ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeec-----------------CCCCC
Confidence 3678999999999999999999999865432 22222223332110 000000000 00111
Q ss_pred ChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 501 sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
.|+-=..+.+.+.-....++|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12211233333333345689999999999999999885
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.20 E-value=2.1 Score=43.77 Aligned_cols=111 Identities=16% Similarity=0.217 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCC---CCCCC-ccccCcccccccCcchHHHHHHhcCeEE
Q 002743 424 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYPS-SSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI-~v~mlTGD~~~tA~~ia~~lGi~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
|.-|+..++|+.+++.|- .++++|--|.-.-..+-+..|+.. .++++ ..+.... .+.-.+.. .-.-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G---~L~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG---RLLVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC---cEEeecCC----CCCccC
Confidence 567899999999999997 999999888777777777777632 00000 0000000 00000000 001233
Q ss_pred eeChh-cHHHHHHHHhhcC-------CEEEEEcCCcCCh-hhhhcCCeeEEe
Q 002743 499 GVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 541 (885)
Q Consensus 499 r~sP~-~K~~iV~~lq~~g-------~~V~miGDG~NDa-~aLk~AdvGIa~ 541 (885)
++-|. =|..++..++..+ ..+.++|||.||. |+++...--+||
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 33222 3667776666432 2788999999995 777766665666
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.98 E-value=0.92 Score=46.47 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=55.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia-~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.++++.|++.|+++.++|.-........- +..++.... ...+...+ +..-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 112321100 00000000 000112
Q ss_pred --hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 503 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 503 --~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
+==..+.+.+.-....+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1112333444334466899999999999999988853
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.91 E-value=1.7 Score=43.35 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=72.9
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------ChHHHHH
Q 002743 386 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 456 (885)
Q Consensus 386 ~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~--v~mlTGD-------~~~tA~~ 456 (885)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788888764432 21 1234578889999999999999874 9999886 3788999
Q ss_pred HHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhc-----CCEEEEEcCCc-CChh
Q 002743 457 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 530 (885)
Q Consensus 457 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~-----g~~V~miGDG~-NDa~ 530 (885)
+.+.+|++. + .+..-.|--..++.+.++.+ -+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12234576666788888755 56799999974 4554
Q ss_pred hhh
Q 002743 531 ALK 533 (885)
Q Consensus 531 aLk 533 (885)
+=.
T Consensus 152 ~gN 154 (168)
T PF09419_consen 152 MGN 154 (168)
T ss_pred Hhh
Confidence 433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.30 E-value=0.82 Score=47.59 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=60.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.| ++++.++|+.....+...-+..|+.... +...+.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999888777777778875321 11111111000 0011122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
-=....+.+.-....|+|+||..+|+.+=++|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 1122333333333568999999999999999998764
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.62 E-value=1.2 Score=49.36 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
++.+++.+++++|++.|+++.++|.-+...|..+-++ +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999988887 6653211 0111
Q ss_pred eChhcHHHHHHHHhh----cCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 500 VFPEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~----~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
..++-|.+.++.+-+ .-..++|+||...|..+.+++..++.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 223345444443332 346799999999999999998888655
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=84.77 E-value=1.9 Score=47.68 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=39.0
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia---~~lGi~ 464 (885)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...+. +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977777776 456663
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=84.60 E-value=1.6 Score=44.49 Aligned_cols=97 Identities=11% Similarity=0.073 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--CCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +-... +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 46899999999999985 56667764444444344556653210 00011 111111
Q ss_pred hhcHHHHHH-HHhhcC-CEEEEEcCCcCChhhhhcC--CeeE-Eeccch
Q 002743 502 PEHKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 545 (885)
Q Consensus 502 P~~K~~iV~-~lq~~g-~~V~miGDG~NDa~aLk~A--dvGI-a~g~~t 545 (885)
+. |-++++ .+++.| ..++|+||..+|+.+-++| ++-. .+..|.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 11 223333 333333 4588999999999999999 8863 344443
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=83.96 E-value=0.99 Score=45.48 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... ..++...+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999998 478999998888888888999984321 111111000000 000011222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=..+++.+......++|+||...|+.+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444544556789999999999988888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.62 E-value=1.8 Score=43.53 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=58.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcH
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 505 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 505 (885)
-|+ .++++.|++. +++.++||.....+...-++.|+.... ..++...+.. ..+-.|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 354 6899999875 899999999999999999999985321 1111111000 111122222
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 506 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 506 ~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
....+.++-....|.|+||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333344443345688999999999999998875
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=82.15 E-value=1.2 Score=40.50 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia---~~lGi~ 464 (885)
|++.-.+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667888899999999999999999999998866655555 456764
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 885 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-113 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-39 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-38 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 8e-38 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-37 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 9e-24 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 9e-24 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-23 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-23 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-19 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-19 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 1e-16 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-11 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-08 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 8e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 885 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-125 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-122 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-115 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-45 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-44 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 7e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 9e-29 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 1e-26 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-17 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 7e-15 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 8e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 4e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 6e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1174 bits (3038), Expect = 0.0
Identities = 710/819 (86%), Positives = 753/819 (91%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
MWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAAAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 120
MA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 121 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 180
SLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 244
Query: 181 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240
NFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 245 NFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 301 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKG 424
Query: 361 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 420
APEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGLLP
Sbjct: 425 APEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLP 484
Query: 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480
LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG KDA
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540
++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGIA
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 541 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 600
VADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLIA
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 601 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 660
LIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AIMT
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMT 724
Query: 661 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720
V+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780
LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IRYI
Sbjct: 785 ALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844
Query: 781 LSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 819
LSGKAW L ENKTAFT KKDYGKEEREAQW H
Sbjct: 845 LSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1039 bits (2688), Expect = 0.0
Identities = 282/826 (34%), Positives = 443/826 (53%), Gaps = 43/826 (5%)
Query: 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 60
P+ +VME AA++A L DW DF I LL++N+ + F++E AG+ L
Sbjct: 120 FVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 61 MANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSALTG 119
LA K VLRDG E +A +VPGD++ ++ G I+PAD R++ D L++DQSALTG
Sbjct: 173 KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 120 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTA 178
ESL V K+ D+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF +VL
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 179 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 238
IG + + ++ + + + ++ L + I G+P+ +P V++ TMA+G+
Sbjct: 293 IGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351
Query: 239 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 298
L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GV+ E ++L A
Sbjct: 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTA 408
Query: 299 ARASRTENQ--DAIDAAIVGMLADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGN 353
A+ + + DAID A + L A++ + + + F PF+PV K+ G
Sbjct: 409 CLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE 468
Query: 354 WHRASKGAPEQILALCN----CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP 409
KGAP +L E+V + + +FA RG RSLGVAR+
Sbjct: 469 RITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520
Query: 410 GAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 469
W+++G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+GTN+Y
Sbjct: 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580
Query: 470 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 529
+ L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTGDGVNDA
Sbjct: 581 AERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639
Query: 530 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 589
P+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +Y ++++
Sbjct: 640 PSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 590 IRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG 649
I + + L I + +V+ IAI D + I+ D S P W L +++
Sbjct: 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMS 759
Query: 650 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTR 709
V+LG LA+ T + M + M L+LQ+S+ LIF+TR
Sbjct: 760 VLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENWLIFITR 813
Query: 710 SRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFP 769
+ + P L+ A + ++AT ++ + + IW++S +
Sbjct: 814 ANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDT---SIVAVVRIWIFSFGIFCI 870
Query: 770 LDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQ 815
+ + + ++ + +D L+ K+ +K E+
Sbjct: 871 MGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSLQRVS 913
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 401 bits (1032), Expect = e-125
Identities = 205/934 (21%), Positives = 342/934 (36%), Gaps = 178/934 (19%)
Query: 3 NPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLL---VINSTISFIEENNAGNA 56
L +M AA + + G + + L+ V+ + +E + N
Sbjct: 108 GGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNI 167
Query: 57 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 116
A+ + + V+RDG + +A LV GD++ +K GD VPAD R+L+ K+D S+
Sbjct: 168 IASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSS 227
Query: 117 LTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 166
LTGES P T+ +P + F + C +G + +V+ TG T G+ A L
Sbjct: 228 LTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGV 287
Query: 167 N--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 218
++ HF ++ +A+ A I+ + + + +++
Sbjct: 288 ENEKTPIAIEIEHFVDIIAG--------LAILFGATFFIVAMCIGYTFLRAMVFFMAIVV 339
Query: 219 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV- 277
+P + ++V +++ + RL+ + + K + A+E + V+CSDKTGTLT N++TV
Sbjct: 340 AYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVS 399
Query: 278 ----DRNLIEVFAKGVEKEHVI--------------LLAARASRTENQDAIDAAIVGMLA 319
D ++ + L RA+ QDA+ ++
Sbjct: 400 HLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIG 459
Query: 320 DPKEA------------RAGVRE----VHFLPFNPVDKR--TALTYIDSDGNWHRA-SKG 360
D E G RE V +PFN +K + T D H KG
Sbjct: 460 DASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519
Query: 361 APEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 410
APE++L C+ E R+ G R LG + + EK
Sbjct: 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGY 579
Query: 411 APWQ-----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGK 455
A GL+ + DPPR + + + G+ V M+TGD AI
Sbjct: 580 AFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAA 639
Query: 456 ETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDELIEKADG----- 496
G P + +D A + + EL+E
Sbjct: 640 SVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMV 699
Query: 497 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDIV 555
FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+ A +DAA++A+D++
Sbjct: 700 FARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMI 759
Query: 556 LTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGFMLIALIWKFDF 607
L + + I++ V R IF +K Y I I + L
Sbjct: 760 LLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLP-------L 812
Query: 608 SPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWKL--KEIFATGVVL 652
+L I + D IM + R + + L F G +
Sbjct: 813 GCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEPLAAYSYFQIGAIQ 871
Query: 653 GSYLAIMTVVFFWLMRKTDFFSDAFGVRSL---------------------RTRPDEMMA 691
A T F + ++ F G+R R
Sbjct: 872 S--FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCY 929
Query: 692 ALYLQVSIISQ-ALIFVTRSRSWSFIER-----PGLLLATAFVIA-QLVATFIAVYANWS 744
++ + Q A + + ++R S ++ L++A F + + N
Sbjct: 930 TVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNI- 988
Query: 745 FARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 778
F + W V + L+ + +I K G+R
Sbjct: 989 F-NFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 393 bits (1011), Expect = e-122
Identities = 190/936 (20%), Positives = 347/936 (37%), Gaps = 183/936 (19%)
Query: 3 NPLSWVMEAAAIMAIAL------ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 56
S ++ AI+ + + V + ++++ S+ +E +
Sbjct: 103 GGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRI 162
Query: 57 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 116
+ + + V+RDG S +A +V GD++ +K GD +PAD R++ K+D S+
Sbjct: 163 MDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSS 222
Query: 117 LTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 166
LTGES P T+ NP + F + C +G VV+ TG T G+ A L
Sbjct: 223 LTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGL 282
Query: 167 N--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 218
++ HF ++T +AV + I+ + + + + L+ +++
Sbjct: 283 EVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSWLEAVIFLIGIIV 334
Query: 219 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV- 277
+P + ++V + + + R++++ + K + A+E + +CSDKTGTLT N++TV
Sbjct: 335 ANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVA 394
Query: 278 ----DRNLIEVFAKGVEKE--------------HVILLAARASRTENQ------------ 307
D + E + + L RA Q
Sbjct: 395 HMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAG 454
Query: 308 DAIDAAIVGM----LADPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRA-SKG 360
DA ++A++ + R ++ +PFN +K + S + + KG
Sbjct: 455 DASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKG 514
Query: 361 APEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT----- 405
APE+IL C+ +ED+++ + G R LG +PE
Sbjct: 515 APERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY 574
Query: 406 ---KESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGK 455
+ P P VGL+ + DPPR + + + + G+ V M+TGD AI K
Sbjct: 575 PFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 634
Query: 456 ETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDELIEKADG----- 496
G P + +D A + L + L +
Sbjct: 635 GVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIV 694
Query: 497 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDIV 555
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ + +D ++ A+D++
Sbjct: 695 FARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754
Query: 556 LTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGFMLIALIWKFDF 607
L + + I++ V R IF +K Y + I+ L
Sbjct: 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLP-------L 807
Query: 608 SPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWKLKEIFATGVVLGS 654
+L I + D IM + P + KL + G
Sbjct: 808 GTVTILCIDLGTDMVPAISLAYEQAESDIMK------RQPRNPKTDKLVNERLISMAYGQ 861
Query: 655 YLAIMTV----VFFWLMRK--------------------TDFFSDAFGVRSLRTRPDEMM 690
I + +F ++ + +D + R
Sbjct: 862 IGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEF 921
Query: 691 AA--LYLQVSIISQ-ALIFVTRSRSWSFIER----PGLLLATAFVIA-QLVATFIAVYAN 742
+ ++ Q A + + ++R S ++ L+ A ++ +
Sbjct: 922 TCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG-TD 980
Query: 743 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 778
+ R+ W + YSL+ + ++ +F IR
Sbjct: 981 VAL-RMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 375 bits (966), Expect = e-115
Identities = 215/926 (23%), Positives = 354/926 (38%), Gaps = 192/926 (20%)
Query: 3 NPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 59
+ L ++ AA ++ LA G + + I+++L+ N+ + +E NA NA A
Sbjct: 60 DLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEA 119
Query: 60 LMANLAPKTKVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLL--EGDPLKIDQS 115
L KV R R S Q A +VPGD++ + +GD VPAD R+L + L++DQS
Sbjct: 120 LKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQS 179
Query: 116 ALTGESLPVTKNP---YDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 162
LTGES+ V K+ D +FSG+ G+ +V TGV T GK
Sbjct: 180 ILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 239
Query: 163 VDSTN--------QVGHFQKVLT-AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 213
+ +T ++ F + L+ I C+ + I PV + G
Sbjct: 240 MAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYY 296
Query: 214 LVLLIG----GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 269
+ + IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGT
Sbjct: 297 FKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGT 356
Query: 270 LTLNKLTVDR--------------NLIEVFAKGVEKEHVILLAARASRTENQDAIDA-AI 314
LT N+++V + N + E +L + R+ D + A
Sbjct: 357 LTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELAT 416
Query: 315 VGMLA------------------DPKEA-------RAGVREVHF---------------- 333
+ L + E + V
Sbjct: 417 ICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVI 476
Query: 334 ---------LPFNPVDKRTALTYIDSDGNWHRAS-----KGAPEQILALCNC-------- 371
L F+ K ++ + + KGAPE ++ CN
Sbjct: 477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRV 536
Query: 372 --REDVRKKVHAVIDKF--AERGLRSLGVARQEIPEKTKESPGAPWQ----------LVG 417
V++K+ +VI ++ LR L +A ++ P K +E VG
Sbjct: 537 PMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVG 596
Query: 418 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSL 473
++ + DPPR + +I+ + G+ V MITGD +AI + G + +
Sbjct: 597 VVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAY 654
Query: 474 LGQDKDASIAALPVDELIEKADG---FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 530
G++ LP+ E E FA V P HK +IV+ LQ I MTGDGVNDAP
Sbjct: 655 TGRE----FDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 710
Query: 531 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY------ 584
ALKKA+IGIA+ T A++AS++VL + S I++AV RAI+ MK + Y
Sbjct: 711 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNV 770
Query: 585 --AVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKD 629
V I + LG P +L + ++ DG IM
Sbjct: 771 GEVVCIFLTAALGLPEA-------LIPVQLLWVNLVTDGLPATALGFNPPDLDIM----- 818
Query: 630 RVKPSPQPDSWKLKEIFATGVVLGSYLAIMTV-VFFWLMRKTDFFSDAFGVRSLRTRPDE 688
P + +F + +G Y+ TV W + D GV +
Sbjct: 819 DRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFM---YAEDGPGVTYHQLTHFM 875
Query: 689 MMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARI 748
+ + + + + + V ++ ++ N S R+
Sbjct: 876 QCTEDHPHFEGLDCEIFEAPEPMTMAL---------SVLVTIEMCNALNSLSENQSLMRM 926
Query: 749 EGCG--WGWAGVIW---LYSLVTYFP 769
W + L+ L+ Y
Sbjct: 927 PPWVNIWLLGSICLSMSLHFLILYVD 952
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 6e-45
Identities = 134/549 (24%), Positives = 219/549 (39%), Gaps = 119/549 (21%)
Query: 52 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 110
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 111 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 158
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 159 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 215
L D +V +F + + +I+ I I P+ L+
Sbjct: 315 PPIQRLAD---KVVAYFIPTVLLV------AISAFIYWYFIAHAPLLF-----AFTTLIA 360
Query: 216 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 271
+L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 272 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 330
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 460
Query: 331 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 384
H + +K + G +G + + N R V +V ++
Sbjct: 461 -HGIELGEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 385 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 444
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 445 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504
MITGD + R L +D +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 505 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 564
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 565 ISAVLTSRA 573
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 3e-44
Identities = 134/555 (24%), Positives = 224/555 (40%), Gaps = 119/555 (21%)
Query: 52 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 110
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 111 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 158
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 159 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 215
L D +V +F + T + +I+ I I P+ L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL----VAISAFIYWYFIAHAPLLF-----AFTTLIA 282
Query: 216 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 271
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 272 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 330
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 382
Query: 331 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 384
H + +K + +G + + N R V +V ++
Sbjct: 383 -HGIELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 385 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 444
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 445 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504
MITGD + R L +D +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 505 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 564
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 565 ISAVLTSRAIFQRMK 579
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 7e-30
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 248 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI-LLAARASRTEN 306
+ A E + + DKTGTLT + V ++ ++ ++ + A+ +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 307 QDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIL 366
A AAIV +EA V++ A+ G +
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 367 ALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 424
+ + ++ K ++K ++G + + + ++ G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 484
R +S E I + +G+ M+TGD + K LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 485 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 544
+D+ A V P K E VK +Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 --LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 545 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 579
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-29
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 474 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 533
+ E + + PE K I+++L++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 534 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 579
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 9e-29
Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 87/349 (24%)
Query: 242 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 301
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 302 -SRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 360
R+E+ A AIV K+A H + +K + G +G
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----G------EG 106
Query: 361 APEQILALCNCR------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 414
+ + N R V +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 415 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPS 470
+ G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 471 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 530
+D +I A V P K E VK+LQ K + GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 531 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 579
AL +AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-26
Identities = 38/52 (73%), Positives = 47/52 (90%)
Query: 834 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
++ EL+++AE+AKRRAE+AR RELHTLKGHVESVVKLKGLDI+TIQQ Y +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 6e-25
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 474 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 533
+ +++ A + PE K IV L+++ I M GDGVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 534 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 580
KADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 1e-17
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 54 GNAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 111
G+A AL+ L P++ ++ DG E + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 112 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----STN 167
+D+S +TGE +PV K +V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 168 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP- 226
+ ++ F I V +++ I+ G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLI----IACPC 384
Query: 227 -----TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNL 281
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 385 ALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL---- 438
Query: 282 IEVFAKGVEKEHVILLAA 299
+ +++ + LAA
Sbjct: 439 TRIVTDDFVEDNALALAA 456
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 75.2 bits (186), Expect = 2e-16
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 56 AAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 114
A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 115 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 152
S ++GE +PV K+ DEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-15
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 286 AKGVEKEHVILLAARASRTENQ--DAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDK 341
G E V+ A S + + +D A++ + + +++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 342 RTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGL 391
R ++ ++ + KGA ++IL +C+ + + +K+ V D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 392 RSLGVARQEIPEKTKE-SPGAPWQLV--GLLPLFDPPRH 427
R + VA + +P + + L+ G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 52 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVP------GDVISIKLGDIVPADARL 104
A A L+ +L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 105 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 152
+EG +D+S +TGE++PV K P V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 8e-15
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 856 RELHTLKGHVESVVKLKGLDIDTIQQHYTV 885
RELHTLKGHVE+VVKLKGLDI+TIQQ Y +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-09
Identities = 100/626 (15%), Positives = 172/626 (27%), Gaps = 202/626 (32%)
Query: 376 RKKVHAVIDKFA--------ERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 427
+ + D F + +S+ ++++EI + G L LF
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMS----KDAVSGTLRLFWTLLS 73
Query: 428 DSAETIRRALN--LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 485
E +++ + L +N K + I E R+ M T MY
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQ-------------- 115
Query: 486 PVDELIEKADGFAGVF---PEHKYEIVKRLQERKH-----ICGMTGDG--------VNDA 529
D L FA + ++ + L E + I G+ G G
Sbjct: 116 -RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 530 PALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586
K D I + + S ++ L I TSR+ N +
Sbjct: 175 KVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRIH 228
Query: 587 SITIRIVLGFM-------LIAL-------IWK-FDFS-PFMVL-----IIAILNDGTIMT 625
SI + L+ L W F+ S ++ + L+ T
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 626 ISKDRVKPSPQPDSWKLKEIFA--TG---------VVLGSYLAIMTVVF----------F 664
IS D + PD ++K + V+ + + +
Sbjct: 289 ISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 665 WLMRKTDFFSDAFGVRSLRT-RPDEMMAALYLQVSI------ISQALI------------ 705
W D + SL P E ++ ++S+ I L+
Sbjct: 347 WKHVNCDKLTTIIES-SLNVLEPAE-YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 706 --FVTRSRSWSFIER---------PGLLLATAFVIAQLVA---TFIAVYA------NWSF 745
V + +S +E+ P + L + A + + Y +
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 746 ARIEGCGWGWAGVIWLYSLVTY-------------FP---LDILKF---GIRYILSGKAW 786
+ YS + + F LD +F IR+ AW
Sbjct: 465 IPPYLDQ-------YFYSHIGHHLKNIEHPERMTLFRMVFLD-FRFLEQKIRH--DSTAW 514
Query: 787 -------DTL--LENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYR 837
+TL L+ + D E L L E N I S Y
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERLVNAI------LDFLPKIEENLICSK---YT 565
Query: 838 EL---------SEIAEQAKRRAEVAR 854
+L I E+A + +V R
Sbjct: 566 DLLRIALMAEDEAIFEEAHK--QVQR 589
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 4e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
K V ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 559 PG 560
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 559 PG 560
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
+K L E+ I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 559 PG 560
G
Sbjct: 160 AG 161
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
K + L I GD +NDA LK+ I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 559 PG 560
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
K EI ++++E+ + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 559 PG 560
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 559 PG 560
G
Sbjct: 153 TG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 503 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
K L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 559 PG 560
G
Sbjct: 183 KG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 433 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 492
I+ + GV +I+G + AI + + LG+ +++ DK + L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 493 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 552
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 553 DIVLTEPG 560
+ G
Sbjct: 147 HGITRAQG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 433 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 492
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 493 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 552
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 553 DIVLTEPG 560
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 433 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 492
++ +N G+ + +ITG + + R+ AL + +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 493 KADGFAGVFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 548
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 549 RSASDIVLTEPG 560
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)
Query: 346 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL-GVARQEIPEK 404
T +D + AP + +AL ++ V K ++ + L ++EI
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 405 TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 465 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 524
+Y + + D G K ++ L E M GD
Sbjct: 118 DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGD 171
Query: 525 GVNDAPALKKADIGIA 540
V D A K +D+ A
Sbjct: 172 SVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 500 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 556 LTEPGLSVII 565
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 500 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ K EI++++ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 556 LTEPGLSVII 565
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 500 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 556 LTEPGLSVII 565
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 500 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 556 LTEPGLSVII 565
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 885 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 8e-19 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-14 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-04 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-13 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (278), Expect = 6e-29
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 472
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 473 LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 532
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 533 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 568
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 116 bits (292), Expect = 1e-28
Identities = 30/346 (8%), Positives = 80/346 (23%), Gaps = 37/346 (10%)
Query: 246 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---DRNLIEVFAKG---------VEKEH 293
+ + + + + + + + ++ I K +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 294 VILLAARASRTENQD--AIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 351
I L + + + A + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 352 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 411
+ + A + + + + + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 412 PWQLVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 469
++ G + P + + G + + TG LG+
Sbjct: 202 TFKT-GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 470 SSSLLGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 521
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 522 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 559
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.8 bits (209), Expect = 5e-20
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 474 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 533
P K E VK+LQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 534 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 568
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.9 bits (199), Expect = 8e-19
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 69 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLLEGDP--LKIDQSALTGESLPV 124
KV R R S Q A +VPGD++ + +GD VPAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 125 TKNP-------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 163
K+ + +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 74.3 bits (182), Expect = 2e-14
Identities = 39/277 (14%), Positives = 81/277 (29%), Gaps = 91/277 (32%)
Query: 1 MWNPLSWVMEAAAIMAIAL---ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 57
+ L ++ AA ++ L G + + I+++L+ N+ + +E NA NA
Sbjct: 57 FEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAI 116
Query: 58 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 117
AL T+ D P +L E
Sbjct: 117 EALKEYEPAATE-------------------------QDKTPLQQKLDE----------- 140
Query: 118 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 177
GE L ++ +++ G V + +
Sbjct: 141 FGEQL------------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK 182
Query: 178 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 237
IAV L + IP +P V++ +A+G+
Sbjct: 183 ---------IAVA-------------------------LAVAAIPEGLPAVITTCLALGT 208
Query: 238 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 274
R++++ AI + + ++E + + ++
Sbjct: 209 RRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 41.6 bits (97), Expect = 4e-04
Identities = 44/257 (17%), Positives = 77/257 (29%), Gaps = 38/257 (14%)
Query: 562 SVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILND 620
+ S RAI+ MK + Y +S + +V F+ AL P +L + ++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 621 GT-------------IMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFF--- 664
G IM R P W A G +G+ +F
Sbjct: 279 GLPATALGFNPPDLDIMDR-PPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337
Query: 665 ------------WLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS 712
M+ T+ G+ E M + I + S +
Sbjct: 338 EDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 397
Query: 713 WSFIER-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVT 766
S + LL + ++ + ++ +++ ++ SL
Sbjct: 398 QSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLP--MIFKLKALDLTQWLMVLKISLPV 455
Query: 767 YFPLDILKFGIRYILSG 783
+ILKF R L G
Sbjct: 456 IGLDEILKFIARNYLEG 472
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.0 bits (165), Expect = 2e-13
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 308 DAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRASKGA 361
DA ++A++ + ++ R +V + FN +K + D+ + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 362 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------ 405
PE+IL C+ ++++ + G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 406 -----KESPGAPWQLVGLLPLFDPPRHD 428
P VGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 236 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 295
G + + + + + E+A + LC+D + K G E +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 296 L-LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNW 354
L + + + + + A R +++ L F+ K ++ + +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 355 HR-----ASKGAPEQILALCNCR----------EDVRKKVHAVIDKF--AERGLRSLGVA 397
KGAPE ++ CN V++K+ +VI ++ LR L +A
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205
Query: 398 RQEIPEKTKE 407
++ P K +E
Sbjct: 206 TRDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.8 bits (141), Expect = 4e-10
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 483
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 484 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 543
+ +D + K ++ L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 544 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 580
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 1e-07
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 412 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 471
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 472 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI--CGMTGDGVNDA 529
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 530 PALKKADIGIAVA--DATDAARSASDIVLTE 558
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 561 LSVIISAV 568
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.4 bits (109), Expect = 4e-06
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 9e-06
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 55/193 (28%)
Query: 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 490
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 491 IEK---------------------ADGFAGVFPEHKYEIVKRLQERKHI----------- 518
K A + PE + K + R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 519 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 556 LTEPGLSVIISAV 568
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 497 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 556
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 557 TEPGLSVIISAV 568
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.3 bits (98), Expect = 2e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 504 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 523 GDGVNDAPALKKADIGIAVADATDAARSASDIV 555
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 523 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 575
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555
+ + +R+ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 885 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.89 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.87 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.78 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.76 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.41 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.15 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.12 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.01 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.01 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.88 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.85 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.75 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.75 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.71 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.7 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.58 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.54 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.53 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.52 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.36 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.93 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.69 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.57 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.34 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.29 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.29 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.88 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.86 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.15 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.1 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.86 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 95.85 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.81 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.97 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.93 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 94.75 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.49 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.36 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.23 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.21 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.28 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.91 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.35 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.47 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.39 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.19 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 91.1 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 90.66 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 90.54 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 89.81 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 87.92 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 84.01 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 81.86 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=3e-27 Score=230.71 Aligned_cols=148 Identities=39% Similarity=0.551 Sum_probs=134.0
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
Q ss_conf 999924699999998489949999579828999999990999898888--543375310126810289997726839861
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 500 (885)
||||++++++|+.|+++||++||+|||+..+|+++|+++||..+.... ..+.+.+. ......+..+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHH-HHSCHHHHHHHHHHCCEEESC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCC
T ss_conf 8896539999999998849899989999799999999849988764111000346300-001278876655322300000
Q ss_pred CHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHH
Q ss_conf 82009999999855699999995995893554107923882561089873138887189940589999994
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 571 (885)
Q Consensus 501 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~g 571 (885)
+|+||..+|+.+|++|++|+|+|||.||+|||+.||+||++++++++++++||+++++++|+.++.+|++|
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 11478889999874045404770677888999859888886551199998489999159989999999749
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=1.2e-23 Score=201.89 Aligned_cols=378 Identities=18% Similarity=0.154 Sum_probs=250.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEE
Q ss_conf 9345999999999999999569---9999973569999999999999999999829999999983079934999599499
Q 002743 1 MWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWS 77 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~~---~~~~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~~~ 77 (885)
|+||+.++|+++++++++++.. .....+|.|++.|++++++|+.++++||+|++++++++++..++.
T Consensus 57 ~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~---------- 126 (472)
T d1wpga4 57 FEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA---------- 126 (472)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC----------
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCCC----------
T ss_conf 8389999999999999999987326532023767666311244652577677501777888775212223----------
Q ss_pred EEECCCCCCCCEEEECCCCEEECEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHH
Q ss_conf 98577878896999828985403089984098599821445989753359998312231464080999999844200210
Q 002743 78 EQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFG 157 (885)
Q Consensus 78 ~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g 157 (885)
..||.+|+|.++.+ +||+.+ .+.+.|..+|..|.+|
T Consensus 127 ---------------~~~~~~P~d~~l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~ 162 (472)
T d1wpga4 127 ---------------TEQDKTPLQQKLDE-----------FGEQLS------------------KVISLICVAVWLINIG 162 (472)
T ss_dssp ---------------CCCCCCHHHHHHHH-----------HHHHHH------------------HHHHHHHHHHHHHCCT
T ss_pred ---------------CCCCCCHHHHHHHH-----------HHHHHH------------------HHHHHHHHHHHHHHHH
T ss_conf ---------------56658648889999-----------999998------------------9999787999999999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 17665312688880799999999999999999999999998630334258689999999998707703799999999999
Q 002743 158 KAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 237 (885)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~ 237 (885)
++...+... .+...+.+.+..++++.++++|++||++++++++.++
T Consensus 163 ~~~~~~~~~----------------------------------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~ 208 (472)
T d1wpga4 163 HFNDPVHGG----------------------------------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGT 208 (472)
T ss_dssp TSSSCCSSS----------------------------------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----------------------------------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 999998610----------------------------------4689999999999999998675168999999999999
Q ss_pred HHHHCCCCEECCCHHHHHCCCCEEEEECCCC--CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 8732179232267044420383188605678--88779128998733300458774999999999725768782899999
Q 002743 238 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTG--TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 315 (885)
Q Consensus 238 ~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTG--TLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~ 315 (885)
++|+|+|++||+++++|++|+..++|+|||- |||.|
T Consensus 209 ~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n------------------------------------------ 246 (472)
T d1wpga4 209 RRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN------------------------------------------ 246 (472)
T ss_dssp HHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH------------------------------------------
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------
T ss_conf 99986366066589999999998888677640133436------------------------------------------
Q ss_pred HHCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 75089377731871678634777786179999948996899982947899976059957899999999999880894889
Q 002743 316 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 395 (885)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~ 395 (885)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 98421388787899999506676045899992469999999848994999957982899999999099989888854337
Q 002743 396 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 475 (885)
Q Consensus 396 ~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~ 475 (885)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEE
Q ss_conf 53101268102899977268398618200999999985569999999599589355410792388256108987313888
Q 002743 476 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555 (885)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDiv 555 (885)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCC
Q ss_conf 7189940589999994999999999999999998999-999999997420897579999999973000-00234687899
Q 002743 556 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKP 633 (885)
Q Consensus 556 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~il~i~i~~~~~-~~~l~~~~~~~ 633 (885)
+.. ...+....+.++.+++|+|++|+|+++|++ .++++.|++++
T Consensus 247 ----------------------------------~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~ 292 (472)
T d1wpga4 247 ----------------------------------VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDL 292 (472)
T ss_dssp ----------------------------------HHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCS
T ss_pred ----------------------------------HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf ----------------------------------9999999999973998642379999999875888999996388854
Q ss_pred C---CCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------------CCCC---CCCCCCCHH
Q ss_conf 9---9999----211899999999999999999999999998304456----------------6447---655677777
Q 002743 634 S---PQPD----SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFS----------------DAFG---VRSLRTRPD 687 (885)
Q Consensus 634 ~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~---~~~~~~~~~ 687 (885)
. ++|+ +.-.+.++...+..|.+.++.++..+++.+...... +... .........
T Consensus 293 ~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (472)
T d1wpga4 293 DIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAP 372 (472)
T ss_dssp GGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCH
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 43049999997566499999999999999999999999999997237998767877677640677654465203455676
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC--HHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHH
Q ss_conf 899999999999999998456248887-6546--1499999999999999999884023--3222364116689999999
Q 002743 688 EMMAALYLQVSIISQALIFVTRSRSWS-FIER--PGLLLATAFVIAQLVATFIAVYANW--SFARIEGCGWGWAGVIWLY 762 (885)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 762 (885)
+.+|+.|..+++++.++.++.|+.+.+ |... .+.|+++++++..++..++ +|.++ .++++.+++|.+|++++.+
T Consensus 373 ~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i-~yiP~l~~vf~~~pL~~~~w~i~l~~ 451 (472)
T d1wpga4 373 EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKI 451 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTTTHHHHTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 78999999999999999999825775422257631699999999999999999-98667788880658899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999876774276
Q 002743 763 SLVTYFPLDILKFGIRYILSG 783 (885)
Q Consensus 763 ~~~~~~~~~~~k~~~r~~~~~ 783 (885)
+++.++..|+.|++.|++..+
T Consensus 452 ~~~~~~~~El~K~~~R~~~~~ 472 (472)
T d1wpga4 452 SLPVIGLDEILKFIARNYLEG 472 (472)
T ss_dssp HTHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999983108899
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=7.6e-23 Score=195.55 Aligned_cols=125 Identities=34% Similarity=0.495 Sum_probs=117.5
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 06676045899992469999999848994999957982899999999099989888854337531012681028999772
Q 002743 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 414 ~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
+..+.++++|++|++++++|+.|+++||+++|+|||+..++.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH-----------------------------
T ss_conf 147997368899811999999999859979997586335556777654222-----------------------------
Q ss_pred CCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 6839861820099999998556999999959958935541079238825610898731388871899405899999
Q 002743 494 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 494 ~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
.+|++++|++|..+|+.+|+. +.|+|+|||.||+|||++||+||+|++++++++++||+++++++|+.++.+++
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -HHCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf -101211026799999999859-97899967877578897478624537658789984999997899889999859
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.87 E-value=1.1e-27 Score=234.10 Aligned_cols=312 Identities=10% Similarity=-0.025 Sum_probs=209.5
Q ss_pred CHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEE-----CCCCCCHH-HHHHHHHHHC----CCCCCCHHHHHHHHHCC
Q ss_conf 70444203831886056788877912899873330-----04587749-9999999972----57687828999997508
Q 002743 250 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV-----FAKGVEKE-HVILLAARAS----RTENQDAIDAAIVGMLA 319 (885)
Q Consensus 250 ~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~-----~~~~~~~~-~~l~~a~~~~----~~~~~~~~~~al~~~~~ 319 (885)
..+.|.||..+++|+|||||+|.|+|++..+.... ...++..+ +++...+.+. ....+++...+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred HHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 61201125640453376551004331113305324667666268880699999999999998774348985778987775
Q ss_pred CHHH----HHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 9377----731871678634777786179999948996899982947899976059957899999999999880894889
Q 002743 320 DPKE----ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 395 (885)
Q Consensus 320 ~~~~----~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~ 395 (885)
.... .++.+.....+||++.+|+|++.....++.+..+.+|+++.+ ...+...+++...+.+++.+|+|+|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL----HVSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT----TCSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHC----CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 43640899987536555677514888876532455314475552137652----87588899998689999999999987
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEECCCCCCC--CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9842138878789999950667604589999--24699999998489949999579828999999990999898888543
Q 002743 396 VARQEIPEKTKESPGAPWQLVGLLPLFDPPR--HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 473 (885)
Q Consensus 396 ~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr--~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~ 473 (885)
+|++..++.+.+ ...+....|++..++++| ++++++++.|+++|++++|+|||+..+|..+++++|+.........+
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred HHHHCCCCCCCC-CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 722022334553-3156675423013565334363999999999879959998899799999999981995347850587
Q ss_pred CCCCCC--------CCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCC---EEEEEC
Q ss_conf 375310--------126810289997726839861820099999998556999999959958935541079---238825
Q 002743 474 LGQDKD--------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVA 542 (885)
Q Consensus 474 ~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad---vGIai~ 542 (885)
.+.+.. .......-...+..+..+++++|++|..+++.++..++.|+|+|||.||++|+|+|+ |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECC
T ss_conf 44133311220331102369986999999998088778899999973899886999889989999999879988999458
Q ss_pred -CCHHHHH----HCCCEEECCCCCCHHHHHH
Q ss_conf -6108987----3138887189940589999
Q 002743 543 -DATDAAR----SASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 543 -~~~~~a~----~aaDivl~~~~~~~i~~~i 568 (885)
.+++..+ ..||+++ +++..+..++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 8886437789767999998--8999999999
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=4.8e-19 Score=165.23 Aligned_cols=98 Identities=40% Similarity=0.598 Sum_probs=89.0
Q ss_pred CCEEEEECCEE--EEEECCCCCCCCEEEECCCCEEECEEEEEE--ECCEEEEECCCCCCCCCCCCCCC------------
Q ss_conf 93499959949--998577878896999828985403089984--09859982144598975335999------------
Q 002743 66 PKTKVLRDGRW--SEQDASILVPGDVISIKLGDIVPADARLLE--GDPLKIDQSALTGESLPVTKNPY------------ 129 (885)
Q Consensus 66 ~~~~V~r~g~~--~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~--g~~~~Vdes~LTGEs~pv~K~~g------------ 129 (885)
.+++|+|+|++ ++|++++|+|||+|.+++||.|||||+|++ +.+++||||+|||||.|+.|.++
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~ 80 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDK 80 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGC
T ss_pred CCEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 92699999984599986999889989999999999515699996126268987200034689874136622654344333
Q ss_pred -CCCCCCCEEEECEEEEEEEEECCCHHHHHHHHHH
Q ss_conf -8312231464080999999844200210176653
Q 002743 130 -DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 163 (885)
Q Consensus 130 -~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~~~l~ 163 (885)
+.+|+||.+.+|+++++|++||.+|.+||+++++
T Consensus 81 ~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 81 KNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CCEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 34477416898456999999996003889999759
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.76 E-value=5.2e-17 Score=149.04 Aligned_cols=123 Identities=22% Similarity=0.342 Sum_probs=106.7
Q ss_pred CCCHHHHHHHHHC----CCHHHHHCCCCEEEEECCCCCCCCEEEEEECC--CCCEEEEECCCHHHHHHHCC---------
Q ss_conf 8782899999750----89377731871678634777786179999948--99689998294789997605---------
Q 002743 306 NQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDS--DGNWHRASKGAPEQILALCN--------- 370 (885)
Q Consensus 306 ~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~g~~~~~~KGa~~~il~~~~--------- 370 (885)
.++|.|.|++.++ .+....+..+++++.+||+|.+|||+++++.+ ++++.+++|||||.|+++|+
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHEEECCCEE
T ss_conf 66859999999999959899999863828646855788877899997267887434785278899998634353489530
Q ss_pred -CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC-----------CCCCCCCCEEEEEECCCCCCCCC
Q ss_conf -99578999999999998808948899842138878-----------78999995066760458999924
Q 002743 371 -CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 428 (885)
Q Consensus 371 -~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~-----------~~~~e~~l~llG~i~i~D~lr~~ 428 (885)
.+++.++.+.+.+++|+.+|+|+|++||+.++..+ .+..|.+|+|+|++++.||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred ECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 0238899999999999740876899999986583225554545701454221798998999988089899
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.41 E-value=2e-13 Score=120.35 Aligned_cols=115 Identities=22% Similarity=0.352 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHCCCH--------------------HHHHCCCCEEEEECCCCCCCCEEEEEECCCC-----CEEEEECCC
Q ss_conf 782899999750893--------------------7773187167863477778617999994899-----689998294
Q 002743 307 QDAIDAAIVGMLADP--------------------KEARAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGA 361 (885)
Q Consensus 307 ~~~~~~al~~~~~~~--------------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa 361 (885)
++|.+.|++.++... ...+..++.++.+||+|.+|||+++++.+++ .+.+|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 89980799999999399757863243033320111455653707888600656627899987489986663159998487
Q ss_pred HHHHHHHCCC----------CHHHHHHHHHHHHHH--HHCCCEEEEEEEEECCCCCC----------CCCCCCCEEEEEE
Q ss_conf 7899976059----------957899999999999--88089488998421388787----------8999995066760
Q 002743 362 PEQILALCNC----------REDVRKKVHAVIDKF--AERGLRSLGVARQEIPEKTK----------ESPGAPWQLVGLL 419 (885)
Q Consensus 362 ~~~il~~~~~----------~~~~~~~~~~~i~~~--a~~Glr~l~~a~~~~~~~~~----------~~~e~~l~llG~i 419 (885)
||.|+++|+. +++.++.+.+.++++ +.+|+|+|++|||.++.... +.+|++|+|+|++
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlv 237 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEE
T ss_pred HHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEE
T ss_conf 49999736234439926309999999999999998675378889999999878440113323416688761799999998
Q ss_pred CC
Q ss_conf 45
Q 002743 420 PL 421 (885)
Q Consensus 420 ~i 421 (885)
+|
T Consensus 238 gi 239 (239)
T d1wpga3 238 GM 239 (239)
T ss_dssp EE
T ss_pred CC
T ss_conf 79
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=3.9e-10 Score=94.16 Aligned_cols=71 Identities=23% Similarity=0.120 Sum_probs=60.3
Q ss_pred CHHCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHH
Q ss_conf 820099999998556----99999995995893554107923882561089873138887189940589999994
Q 002743 501 FPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 571 (885)
Q Consensus 501 ~P~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~g 571 (885)
....|...++.+.++ .+.|+++|||.||.+|++.|++||||+++.+.++++||+++..++..++.+++.+-
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf 776761332011211001332425662673079999978907998898799998579998999847899999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.12 E-value=8.1e-10 Score=91.64 Aligned_cols=69 Identities=26% Similarity=0.156 Sum_probs=59.7
Q ss_pred HHCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHH
Q ss_conf 20099999998556----9999999599589355410792388256108987313888718994058999999
Q 002743 502 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 502 P~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~ 570 (885)
...|...++.+.+. ...|+++|||.||.+|++.|++||||+++.+.+++.||+++..++..++.+++++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 6522789998766510023022564488435999997790899889759999849999898984889999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=3.8e-09 Score=86.25 Aligned_cols=73 Identities=22% Similarity=0.241 Sum_probs=61.9
Q ss_pred EEEECHH--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 9861820--099999998556----999999959958935541079238825610898731388871899405899999
Q 002743 497 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 497 ~~~~~P~--~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
+..+.|. .|...++.+.+. ...++++|||.||.+|++.|+.|++|+++.+.++..|++++..++-.++.++++
T Consensus 188 ~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 188 FLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EEEECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 6885278887654200001100114201799918676799998589189967987999985898838898583999999
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.01 E-value=1.5e-09 Score=89.44 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=62.8
Q ss_pred EEEECHH--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHH
Q ss_conf 9861820--099999998556----9999999599589355410792388256108987313888718994058999999
Q 002743 497 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 497 ~~~~~P~--~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~ 570 (885)
+..+.|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||++|.+.+++.||+++..++-.++.+++++
T Consensus 204 ~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 89995554023668988776505572049999297888999984891899689989999858988278875589999998
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.88 E-value=1.3e-09 Score=90.09 Aligned_cols=73 Identities=22% Similarity=0.273 Sum_probs=62.6
Q ss_pred EEEECHH--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 9861820--099999998556----999999959958935541079238825610898731388871899405899999
Q 002743 497 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 497 ~~~~~P~--~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
+..++|. .|...++.+.+. ...|.++|||.||.+||+.|+.|+||+++.+.+|+.|++++..++-.++...++
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 6888458657778888776650214241899908844199998589189958998999984788818898459999999
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.85 E-value=2.3e-08 Score=80.02 Aligned_cols=106 Identities=23% Similarity=0.205 Sum_probs=85.3
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHH
Q ss_conf 99999984899499995798289999999909998988885433753101268102899977268398618200999999
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 510 (885)
Q Consensus 431 ~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~ 510 (885)
.+|+.++..|+.+.++||+....+...++++++.. ++. ...+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~--~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFL--GKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEE--SCSCHHHHHH
T ss_pred HHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC------------------------------CCC--CCCCHHHHHH
T ss_conf 88878765217899966984467899876321220------------------------------110--1363888999
Q ss_pred HHHH----CCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCH-HHHHH
Q ss_conf 9855----6999999959958935541079238825610898731388871899405-89999
Q 002743 511 RLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 568 (885)
Q Consensus 511 ~l~~----~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~-i~~~i 568 (885)
.+.+ ....|+++||+.||.|||+.|++++|+++|.+.+++.||+|+..++=.+ +.+++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred HHHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCHHHHHHCCEEECCCCCCCHHHHHH
T ss_conf 999986677522577058840789996689289848864999985899917889976399999
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=8.8e-09 Score=83.40 Aligned_cols=130 Identities=18% Similarity=0.158 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+....+....+... .+....+.. .......+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~-~~G~~~g~~--------~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-FNGEYAGFD--------ETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-TTSCEEEEC--------TTSGGGSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEE-EHHCCCCCE--------EEEEEECCC
T ss_conf 04777999999997379979998999358888889870996100366553222-000003642--------224652422
Q ss_pred CHHHHHHHHHHC--CCEEEEECCCCCCHHHHHCCCEEEEEC--CCHHHHHHCCCEEECCCCCCHH
Q ss_conf 099999998556--999999959958935541079238825--6108987313888718994058
Q 002743 504 HKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~AdvGIai~--~~~~~a~~aaDivl~~~~~~~i 564 (885)
.|..+++.++++ ...|.++|||.||++|++.|+++||++ ......++.+|+++.+ |..+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEECC--HHHH
T ss_conf 08999999986348666389971786599898689219979877789999868998689--8884
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.75 E-value=1.1e-08 Score=82.51 Aligned_cols=74 Identities=27% Similarity=0.311 Sum_probs=62.9
Q ss_pred EEEECHH--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHH
Q ss_conf 9861820--099999998556----9999999599589355410792388256108987313888718994058999999
Q 002743 497 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 497 ~~~~~P~--~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~ 570 (885)
+..+.|. .|...++.+.++ ...++++|||.||.+||+.|+.|+||++|.+.+|+.||++...++-.++.+++++
T Consensus 177 ~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 177 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 79997488999999999987322357551676588555999984890899589989999847978088875689999998
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.75 E-value=5e-08 Score=77.38 Aligned_cols=73 Identities=26% Similarity=0.324 Sum_probs=62.3
Q ss_pred EEEECHH--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 9861820--099999998556----999999959958935541079238825610898731388871899405899999
Q 002743 497 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 497 ~~~~~P~--~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
+..++|. .|...++.+.+. ...|+++|||.||.+||+.|++||+|++|.+.+|+.||+++..++..++..++.
T Consensus 181 ~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 181 YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 4565587775167899998860368220899808844099998689089948998999985898858887538999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.71 E-value=5.6e-08 Score=76.98 Aligned_cols=66 Identities=27% Similarity=0.320 Sum_probs=53.3
Q ss_pred HCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCC-CHHHHHH
Q ss_conf 0099999998556----9999999599589355410792388256108987313888718994-0589999
Q 002743 503 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL-SVIISAV 568 (885)
Q Consensus 503 ~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~-~~i~~~i 568 (885)
..|...++.+.+. ...|+++|||.||.+||+.|+.|++|++|.+.+|+.||+++...+- ..+..++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHCCEEECCCCCCCHHHHHH
T ss_conf 50577888776641002020799648763699998589189968998999984899999848886999999
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.70 E-value=7.2e-09 Score=84.06 Aligned_cols=149 Identities=15% Similarity=0.060 Sum_probs=105.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+....+........... ...........+++..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------HIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------EEECTTCCCTTCCSCCSS
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC------EECCCCCCCCCCCCCCHH
T ss_conf 42499999999998542531157753066699999980995014543479828810------220101354325567899
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 099999998556999999959958935541079238825610898731388871899405899999949999999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 578 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i 578 (885)
.|..+++.++..++.|.|+||+.||.+|++.||+++|++...+.+++..--...-++|+.+...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEECCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999984678863899807631399999889978706467999982998362499999999999987899985
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.58 E-value=4.4e-07 Score=69.86 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=91.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
+..+.....++.+ +.+.+...+++.............+................ ........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC---------------EEEEECCSSS
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECCCC---------------CCCCCCCCHH
T ss_conf 5562488999886-04746888516713888899998478333311025621444---------------5432112014
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 099999998556999999959958935541079238825610898731388871899405899999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
.+...++.++...+.|+++|||.||++|++.|++||||+...++.++++|++.. .++..+..++.
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~ 197 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHCCCCEEE-CCHHHHHHHHH
T ss_conf 578899986425652188438732799998589409978977999867895562-68899999999
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.54 E-value=2.6e-07 Score=71.68 Aligned_cols=53 Identities=19% Similarity=0.152 Sum_probs=38.8
Q ss_pred HCHHHHHHHHHH----C-CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEE
Q ss_conf 009999999855----6-9999999599589355410792388256108987313888
Q 002743 503 EHKYEIVKRLQE----R-KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555 (885)
Q Consensus 503 ~~K~~iV~~l~~----~-g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDiv 555 (885)
..|..-++.+.+ . ...|+++|||.||.+||+.|+.||+|+|+.+..++.+|.+
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~~~~~~~~i 235 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSI 235 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTCEEESCH
T ss_pred HCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
T ss_conf 1007799999998359991419998498858999984993899279986887023188
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.53 E-value=2e-07 Score=72.54 Aligned_cols=131 Identities=24% Similarity=0.272 Sum_probs=92.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE--
Q ss_conf 899992469999999848994999957982899999999099989888854337531012681028999772683986--
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-- 499 (885)
Q Consensus 422 ~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-- 499 (885)
..++.+++.+.++.++..|..+.++||.....+....++.+....... .+........ .....
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~ 137 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLT-------------GDVEGEV 137 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEE-------------EEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHH--HHCCCCCCCC-------------CCCCCCC
T ss_conf 000135599999999974987876326542222302220320466654--4211012221-------------2333211
Q ss_pred ECHHCHHH----HHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHH
Q ss_conf 18200999----9999855699999995995893554107923882561089873138887189940589999
Q 002743 500 VFPEHKYE----IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~~P~~K~~----iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i 568 (885)
..+..|.. +.+.++...+.+.++|||.||++|++.|++|||| ++.+..++.||+++..+++..++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 138 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE-CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 1123454103357888466655417863784749999988987899-98999997499999179999999986
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.52 E-value=2.7e-07 Score=71.46 Aligned_cols=71 Identities=18% Similarity=0.140 Sum_probs=58.2
Q ss_pred ECHHCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCC-------EEECCCCCCHHHHHH
Q ss_conf 1820099999998556----99999995995893554107923882561089873138-------887189940589999
Q 002743 500 VFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~~P~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaD-------ivl~~~~~~~i~~~i 568 (885)
.....|...++.+.+. ...|.++|||.||.+||+.|+.|++|+++.+.+++.|| ++...++..++.+++
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l 237 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAI 237 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHH
T ss_conf 67641557788887741577303799758887799996189189967999999998632366653771899714899999
Q ss_pred HH
Q ss_conf 99
Q 002743 569 LT 570 (885)
Q Consensus 569 ~~ 570 (885)
++
T Consensus 238 ~~ 239 (244)
T d1s2oa1 238 AH 239 (244)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=6.2e-06 Score=60.66 Aligned_cols=42 Identities=17% Similarity=0.060 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf 999246999999984899499995798289999999909998
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~ 465 (885)
.+.+.+.+++++++++|+.+.++||++...+..+.+.+++..
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHCHHHHHHHCCCC
T ss_conf 479999999999997799899996897365306888734578
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=4.3e-05 Score=53.99 Aligned_cols=128 Identities=19% Similarity=0.264 Sum_probs=93.9
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH---HHCCCCEEEEECCCCCCCCEEEEEECCCCC
Q ss_conf 99873330045877499999999972576878289999975089377---731871678634777786179999948996
Q 002743 277 VDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE---ARAGVREVHFLPFNPVDKRTALTYIDSDGN 353 (885)
Q Consensus 277 v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~---~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~ 353 (885)
++++. ...|++.++++.+|+.++..++ ||+..|++.++.+... ...........+|....+...+.+ +|
T Consensus 4 ~td~i---p~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~g- 75 (136)
T d2a29a1 4 ASEFI---PAQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINI---DN- 75 (136)
T ss_dssp EEEEE---ECTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEE---TT-
T ss_pred CCEEE---ECCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE---CC-
T ss_conf 54677---3799999999999999727778-6689999999998558775531101244445432342588987---89-
Q ss_pred EEEEECCCHHHHHHHCCC-CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 899982947899976059-9578999999999998808948899842138878789999950667604589999
Q 002743 354 WHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 426 (885)
Q Consensus 354 ~~~~~KGa~~~il~~~~~-~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr 426 (885)
..+.+|++..+.+.+.. .....+.+.+.+++++.+|.+++.++... +++|++++.|++|
T Consensus 76 -~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 76 -RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp -EEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred -EEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEEEEECC
T ss_conf -79996678999999997189880999999999997798599999999-------------9999999983058
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.69 E-value=4e-05 Score=54.20 Aligned_cols=59 Identities=10% Similarity=0.205 Sum_probs=43.6
Q ss_pred EEEECH--HCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECC
Q ss_conf 986182--00999999985569999999599589355410792388256108987313888718
Q 002743 497 FAGVFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558 (885)
Q Consensus 497 ~~~~~P--~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~ 558 (885)
+..+.| ..|...++.+.+.. .++++||+.||.+||+.++.|++|+.|. .+.+|++.+.+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEEECCCCCHHHHHHHHHCCC-CCEEECCCCCHHHHHHCCCCEEEEEECC--CCCCCEEECCC
T ss_conf 8997369898899999974404-4566438887099996028828999689--87667287599
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=2e-05 Score=56.60 Aligned_cols=54 Identities=19% Similarity=0.269 Sum_probs=46.4
Q ss_pred HCHHHHHHHHHHC-CCEEEEECC----CCCCHHHHHCCC-EEEEECCCHHHHHHCCCEEE
Q ss_conf 0099999998556-999999959----958935541079-23882561089873138887
Q 002743 503 EHKYEIVKRLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 556 (885)
Q Consensus 503 ~~K~~iV~~l~~~-g~~v~~iGD----G~ND~~al~~Ad-vGIai~~~~~~a~~aaDivl 556 (885)
..|...++.|.+. ...|.++|| |.||.+||+.|+ .|+||+++.|.++..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHCC
T ss_conf 027899999966984459998688999997299997179858991898999999998619
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.34 E-value=0.00041 Score=46.15 Aligned_cols=133 Identities=11% Similarity=0.042 Sum_probs=80.7
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCC--CCCCC--CCCCCCCCCCCCHHHHHHHHCCEEE
Q ss_conf 9999246999999984899499995798289999999909998988--88543--3753101268102899977268398
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL--LGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~ 498 (885)
-++|+++++.++.|++.|+.+.++||.-......+.+++|+..+.. .++.+ .++.......+.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~------------- 200 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE------------- 200 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS-------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCC-------------
T ss_conf 8766389999999997497089985873999999999829986574699657997088268603478-------------
Q ss_pred EECHHCHHHHH----HHHH--HCCCEEEEECCCCCCHHHHHC---CCEEEEEC--C-C----HHHHHHCCCEEECCCCCC
Q ss_conf 61820099999----9985--569999999599589355410---79238825--6-1----089873138887189940
Q 002743 499 GVFPEHKYEIV----KRLQ--ERKHICGMTGDGVNDAPALKK---ADIGIAVA--D-A----TDAARSASDIVLTEPGLS 562 (885)
Q Consensus 499 ~~~P~~K~~iV----~~l~--~~g~~v~~iGDG~ND~~al~~---AdvGIai~--~-~----~~~a~~aaDivl~~~~~~ 562 (885)
-.....|...+ ...+ .....+.++|||+||..|.+. ++..+++| + . .+.-.++-|+|+.++.-.
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCH
T ss_conf 64345686315445998853278676899967776899983885446324543137669987999876079788568784
Q ss_pred HHHHHH
Q ss_conf 589999
Q 002743 563 VIISAV 568 (885)
Q Consensus 563 ~i~~~i 568 (885)
.++..+
T Consensus 281 ~v~~~i 286 (291)
T d2bdua1 281 EVVNSI 286 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 689999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.29 E-value=0.00077 Score=43.98 Aligned_cols=125 Identities=14% Similarity=0.171 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECH
Q ss_conf 99924699999998489-94999957982899999999099989888854337531012681028999772683986182
Q 002743 424 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~G-I~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P 502 (885)
++-|++.++++.|++.| +++.++|+.....+....+..|+..... ..+.+.+.. .. .-.|
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~---~~--------------k~~p 151 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDAL---DR--------------NELP 151 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCS---SG--------------GGHH
T ss_pred EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCCCCCCCC---CC--------------CCHH
T ss_conf 1068528887654112311223557885000001233201222222--222223344---34--------------5415
Q ss_pred HCHHHHHHHHHH---CCCEEEEECCCCCCHHHHHCCCE---EEEECC--CHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 009999999855---69999999599589355410792---388256--10898731388871899405899999
Q 002743 503 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADI---GIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 503 ~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~Adv---GIai~~--~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
..-...++.+.. ..+.+.|+||+.+|+.|-+.|++ +|+.|. ..+..+..+|+++ ++++.+.+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 77888765300248776680232487278999998499799980799998899658999998--99999999999
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.29 E-value=0.0011 Score=42.70 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=87.3
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECH
Q ss_conf 99992469999999848994999957982899999999099989888854337531012681028999772683986182
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P 502 (885)
.++.|++.++++.|++.|+++.++|+.+......+-+..|+..... ...+.+.+. ......|
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~-d~~~~~d~~-----------------~~~KP~p 159 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDV-----------------PAGRPYP 159 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGS-----------------SCCTTSS
T ss_pred CCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCC-CCCCCCCCC-----------------CCCCCCH
T ss_conf 8317757999999885024411017983566888899876401223-344555432-----------------2234581
Q ss_pred HCHHHHHHHHHHC-CCEEEEECCCCCCHHHHHCCCE-EEEECCCH-------H--------------------HHHHCCC
Q ss_conf 0099999998556-9999999599589355410792-38825610-------8--------------------9873138
Q 002743 503 EHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI-GIAVADAT-------D--------------------AARSASD 553 (885)
Q Consensus 503 ~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~Adv-GIai~~~~-------~--------------------~a~~aaD 553 (885)
+.-....+.+.-. .+.|+|+||..+|+.+=+.|++ .|++..|. + ..+.-+|
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 77899999958987651899968734089999879989998137777898989986279999999999999999747998
Q ss_pred EEECCCCCCHHHHHHH
Q ss_conf 8871899405899999
Q 002743 554 IVLTEPGLSVIISAVL 569 (885)
Q Consensus 554 ivl~~~~~~~i~~~i~ 569 (885)
+++ +++..+..++.
T Consensus 240 ~vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 240 FTI--ETMQELESVME 253 (257)
T ss_dssp EEE--SSGGGHHHHHH
T ss_pred EEE--CCHHHHHHHHH
T ss_conf 998--79999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.88 E-value=0.00053 Score=45.23 Aligned_cols=124 Identities=17% Similarity=0.122 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++++.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+. ......|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTS-----------------SSCTTSSH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHC--CCCCCCCCC-----------------CCCCCCCH
T ss_conf 16889999999985068742021345288999999864963421--431123334-----------------54432101
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECC----CHHHHHHCCCEEECCCCCCHHHHHH
Q ss_conf 0999999985569999999599589355410792-388256----1089873138887189940589999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~----~~~~a~~aaDivl~~~~~~~i~~~i 568 (885)
--..+.+.++-....++|+||..+|..+-+.|++ .|.+.. ..+.....+|+++ +++..++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 3578998864311002021176989999999099599991799983406666999998--9999998863
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.0013 Score=42.13 Aligned_cols=120 Identities=17% Similarity=0.204 Sum_probs=82.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ...+.+.+. ..+...|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC-----------------CCCHHHHH
T ss_conf 45632799988754034552213321000111222222333222--222232322-----------------21014578
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECC--C-HHHHHHCCCEEECCCCCCHH
Q ss_conf 0999999985569999999599589355410792-388256--1-08987313888718994058
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--A-TDAARSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~--~-~~~a~~aaDivl~~~~~~~i 564 (885)
--....+.+.-..+.++|+||..+|+.|-+.|++ .|++.. . .+.....+|+++. ++..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGC
T ss_pred HHHHHHHHCCCCCHHCEEEEECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEEC--CHHHC
T ss_conf 9999999729995130899609899999998399799989987766622358999989--92669
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.15 E-value=0.02 Score=32.69 Aligned_cols=124 Identities=18% Similarity=0.152 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
+|.||+.++++.|+ .|+++.++|+..........+.+|+.... ..++...+ . ......|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~------------~-----~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF--DSITTSEE------------A-----GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEHHH------------H-----TBCTTSHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCC--CCCCCCCC------------C-----CCCCHHHH
T ss_conf 51006999998764-03760366213221101110123322100--22333322------------2-----23221357
Q ss_pred CHHHHHHHHHHCCCEEEEECCC-CCCHHHHHCCCEE-EEEC--CCHHHHHHCCCEEECCCCCCHHHHHHH
Q ss_conf 0999999985569999999599-5893554107923-8825--610898731388871899405899999
Q 002743 504 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG-~ND~~al~~AdvG-Iai~--~~~~~a~~aaDivl~~~~~~~i~~~i~ 569 (885)
-=..+.+.+.-....++++||. .+|+.+-+.|++. |.+. .........+|+++ .+++.++.+++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHH
T ss_conf 788777640664312645621748679999985998999889998701045899998--89999999999
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.028 Score=31.46 Aligned_cols=134 Identities=17% Similarity=0.138 Sum_probs=77.2
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHH---------------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99246999999984899499995798289---------------999999909998988885433753101268102899
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDE 489 (885)
Q Consensus 425 lr~~~~~~I~~l~~~GI~v~mlTGD~~~t---------------a~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (885)
+-|++.++++.|+++|+++.++|...... ........|+.... ..+-....+ .....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~-----~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQ-----GSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTT-----CSSGG
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---EEECCCCCC-----CCCCC
T ss_conf 8878999999986618416666422023556667876540101244555540134454---056553334-----66553
Q ss_pred HHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEE--EEE--CC-CHHHHHHCCCEEECCCCCCHH
Q ss_conf 9772683986182009999999855699999995995893554107923--882--56-108987313888718994058
Q 002743 490 LIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--AD-ATDAARSASDIVLTEPGLSVI 564 (885)
Q Consensus 490 ~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG--Iai--~~-~~~~a~~aaDivl~~~~~~~i 564 (885)
..+...+....|.--..+.+.+.-..+.+.||||..+|..|=+.|+++ +.+ |. ..+.....+|+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHHH
T ss_conf -33455556874322310122116553445122798999999998288847998999777721024798898--999999
Q ss_pred HHHHH
Q ss_conf 99999
Q 002743 565 ISAVL 569 (885)
Q Consensus 565 ~~~i~ 569 (885)
++.++
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHHC
T ss_conf 99963
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.003 Score=39.28 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=35.0
Q ss_pred CHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHCCC-EEEEECCCHHHHH
Q ss_conf 09999999855-6999999959----958935541079-2388256108987
Q 002743 504 HKYEIVKRLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 549 (885)
Q Consensus 504 ~K~~iV~~l~~-~g~~v~~iGD----G~ND~~al~~Ad-vGIai~~~~~~a~ 549 (885)
+|..-++.|.. ..+.++++|| |.||.+||+.|+ .|+++++..+..+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECCHHHHHH
T ss_conf 7899999984899362999868999999769999715972999079999999
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.85 E-value=0.0043 Score=37.98 Aligned_cols=120 Identities=9% Similarity=0.023 Sum_probs=80.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+.+ .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS-------------------SCCSHHH
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCC--CCCCCCCC-------------------CCCCCCC
T ss_conf 21068999875420134-10000233210115778750123320--00022232-------------------2222333
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEE--C-CC-HHHHHHCCCEEECCCCCCHHHHH
Q ss_conf 0999999985569999999599589355410792-3882--5-61-08987313888718994058999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A-DA-TDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai--~-~~-~~~a~~aaDivl~~~~~~~i~~~ 567 (885)
....+.+.++-....+.|+||+.+|+.|-+.|++ .|++ | .. .+.....+|+++ +++..++..
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred CCCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHH
T ss_conf 2110123320120016465477789999998599399985798997789768999998--999999998
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.016 Score=33.51 Aligned_cols=119 Identities=15% Similarity=0.032 Sum_probs=77.5
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
Q ss_conf 58999924699999998489949999579828999999990999898888543375310126810289997726839861
Q 002743 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 421 i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 500 (885)
..-.+.||+.+.+++|++.|+++.++|+............+|+..-... ....... ......
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~-~~~~~d~-----------------~~~~KP 185 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-VDGHFDT-----------------KIGHKV 185 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-CSEEECG-----------------GGCCTT
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHH-CCEEECC-----------------CCCCCC
T ss_conf 1366688789999998642475444589848899999997284043320-2333024-----------------533577
Q ss_pred CHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEE-E---CCC-HHHHHHCCCEEEC
Q ss_conf 8200999999985569999999599589355410792388-2---561-0898731388871
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V---ADA-TDAARSASDIVLT 557 (885)
Q Consensus 501 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-i---~~~-~~~a~~aaDivl~ 557 (885)
.|+-=....+.+.-..+.|+|+||..+|+.+=++|++... + |+. .......++.++.
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEEC
T ss_conf 80888999999489967489994799999999985997999968998998634457881799
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.97 E-value=0.052 Score=29.38 Aligned_cols=125 Identities=11% Similarity=0.113 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++.++++.|++ |+++.++|+.........-+.+|+.... ...+...+. ......|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCC--CCCCCCCCC-----------------CCCHHHHH
T ss_conf 658348999998411-4606886223200123333202222222--222322222-----------------21003332
Q ss_pred CHHHHHHHHHHCCCEEEEECCCC-CCHHHHHCCCEE-EEE-C-CC--HHHHHHCCCEEECCCCCCHHHHHHHH
Q ss_conf 09999999855699999995995-893554107923-882-5-61--08987313888718994058999999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAV-A-DA--TDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~-ND~~al~~AdvG-Iai-~-~~--~~~a~~aaDivl~~~~~~~i~~~i~~ 570 (885)
-=..+.+.+.-..+.++|+||.. +|+.+-+.|++. +.. . .+ .......+|+++ .++..+..++..
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred HHHHHHHHHHCCHHHCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 47889999602877524203571867999998399499997799887643357999898--999999999999
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.93 E-value=0.094 Score=27.32 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=70.1
Q ss_pred CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHH
Q ss_conf 87749999999997257687828999997508937773187167863477778617999994899689998294789997
Q 002743 288 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA 367 (885)
Q Consensus 288 ~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~ 367 (885)
+.++++++.+++..+..++ ||+..|++.++.+........+..+.+|-...+ ++ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~Gi~-----------g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEGVV-----------AD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTEEE-----------ET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEE-----------EE--EEEECCHHHHHH
T ss_conf 9999999999999877687-823999999999805787763231663163378-----------68--999776887776
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECC
Q ss_conf 605995789999999999988089488998421388787899999506676045
Q 002743 368 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 421 (885)
Q Consensus 368 ~~~~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i 421 (885)
.. .+..+.+.+.++++..+|..++.++... +++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CC---CCCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEE
T ss_conf 09---9889899999999986799599999999-------------99999997
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.75 E-value=0.012 Score=34.31 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++.++++.|++.|+++.++|+... .+..+-++.|+.... . .+.+.+.. ......|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~-~i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--T-EILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--E-EEECGGGC----------------CCCTTSSH
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCC--C-CCCCCCCC----------------CCCCHHHH
T ss_conf 4563477654211022220022113510-334433310122122--2-22222234----------------43202578
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCHHHHHHCCCEEECCCCCCHHHHH
Q ss_conf 0999999985569999999599589355410792-388256108987313888718994058999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~~~a~~aaDivl~~~~~~~i~~~ 567 (885)
--..+.+.+.-....|+|+||+.+|..+-+.|++ .|++..+. ..+|..+ .++..+..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~----~~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST----YEGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS----CTTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC----CCCCEEC--CCHHHHHHH
T ss_conf 8899999829997518999479899999998699699984799----9958004--899899998
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.49 E-value=0.0053 Score=37.30 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++.+.++.|++ ++++.++|+.....+..+.++.|+.... ...+ +.+.. ......|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~----------------~~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTI-SADDT----------------PKRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEE-CGGGS----------------SCCTTSSH
T ss_pred CCCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCCC----------------CCCHHHHH
T ss_conf 346403444332014-5542000232111111111222222222--2222-22222----------------22103444
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEE---CCCHHHHHHCCCEEECCCCCCHHHH
Q ss_conf 09999999855699999995995893554107923882---5610898731388871899405899
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai---~~~~~~a~~aaDivl~~~~~~~i~~ 566 (885)
--..+++.++-..+.|.|+||..+|+.+-+.|++.... |.......+.+|+++ .++..+++
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGGG
T ss_pred HHCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCEE--CCHHHHHH
T ss_conf 30023421045113406854778789999984992999935889756765329274--89999985
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.36 E-value=0.067 Score=28.49 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
++.|++++.++.+++.|+++.++|+.+.... ..-+.+|+.... ...+.+.+.. .....|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCC--CCCCCCCCCC-----------------CCCCCHH
T ss_conf 0244268888877764212233455762101-345542022122--2212222234-----------------5688899
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCE
Q ss_conf 099999998556999999959958935541079238825610898731388
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 554 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDi 554 (885)
--..+.+.+. ...+.++||..+|+.+-+.|++-...=++....++..|+
T Consensus 139 ~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHCC--CCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHCCC
T ss_conf 9999999849--997699907999999999859979999998874753579
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.23 E-value=0.055 Score=29.15 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=64.4
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
Q ss_conf 99246999999984899499995798----28999999990999898888543375310126810289997726839861
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 425 lr~~~~~~I~~l~~~GI~v~mlTGD~----~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 500 (885)
+.|++.+.++.+++.|+++..+||+. ..|+++.-+.+|++........+.+.+ -
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC----------------------C
T ss_conf 662499999999975974999938845657999999998719874566634761799----------------------9
Q ss_pred CHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEE
Q ss_conf 8200999999985569999999599589355410792-3882
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 541 (885)
Q Consensus 501 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai 541 (885)
....|...++. -.+++++||..+|..+-.+|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHHHHH----CCEEEEECCCHHHHHHHHHCCCCCEEE
T ss_conf 82379999997----496899659888876798759983575
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.21 E-value=0.06 Score=28.85 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=64.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEC-
Q ss_conf 9992469999999848994999957982-89999999909998988885433753101268102899977268398618-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 501 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~-~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 501 (885)
++.|++.++++.|++.|+++.++|+.+. ..+...-+..++..... .+.+.-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCCE--------------------------EEECCCCC
T ss_conf 6055799999999978994899735662101000000023333210--------------------------23226689
Q ss_pred -HHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCC
Q ss_conf -200999999985569999999599589355410792-3882561
Q 002743 502 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA 544 (885)
Q Consensus 502 -P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~ 544 (885)
|+.-..+.+.+.-..+.+.|+||..+|+.+-++|++ .|.+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G 144 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG 144 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred CHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEEEECCC
T ss_conf 769999999996888699798748787899999869979997999
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.28 E-value=0.096 Score=27.23 Aligned_cols=138 Identities=16% Similarity=0.184 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCC------------------CCC
Q ss_conf 9924699999998489949999579828999999990999898888543375310-126------------------810
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD-ASI------------------AAL 485 (885)
Q Consensus 425 lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~-~~~------------------~~~ 485 (885)
+-||+.++++.++++ ....++|---..-..++++.+|.+.+.+.... +.+ ... +.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~----~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEV----DFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBC----CGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ECCCHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHCCCCCEEECCCC----CCCCCCCCHHHHHHHHHHHHHCCCCCHH
T ss_conf 268889999999864-88479853589999999853588740100234----4312478717799998876530375377
Q ss_pred HHHH-------------HHHHCCEEEEECHHCHHHHHHHHHHC--CCEEEEECCCCCCHHHHHCCCE--EEEEC-CCHHH
Q ss_conf 2899-------------97726839861820099999998556--9999999599589355410792--38825-61089
Q 002743 486 PVDE-------------LIEKADGFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADI--GIAVA-DATDA 547 (885)
Q Consensus 486 ~~~~-------------~~~~~~i~~~~~P~~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~Adv--GIai~-~~~~~ 547 (885)
++.+ +++.+.. +-...|..+++..-.. -..-+++||.+.|..||+.|.= |++++ ||.+-
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~---VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKA---VGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBC---CCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHCC---CCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCC
T ss_conf 889999987131157668764021---47851678998633612698641236753327899997447983688568624
Q ss_pred HHHCCCEEECCCCCCHHHHHHHH
Q ss_conf 87313888718994058999999
Q 002743 548 ARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 548 a~~aaDivl~~~~~~~i~~~i~~ 570 (885)
+-..||+++..++...+...+..
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHH
T ss_conf 44534468966633578899999
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.91 E-value=0.024 Score=32.02 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=36.8
Q ss_pred CHHCHHHHHHHHHHCCCEEEEECCCC-CCHHHHHCCCE-EEEECCC---H---HHHHHCCCEEECC
Q ss_conf 82009999999855699999995995-89355410792-3882561---0---8987313888718
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA---T---DAARSASDIVLTE 558 (885)
Q Consensus 501 ~P~~K~~iV~~l~~~g~~v~~iGDG~-ND~~al~~Adv-GIai~~~---~---~~a~~aaDivl~~ 558 (885)
.|+--..+.+.+.-..+.++||||+. +|+.|-+.|++ +|.+.+| . ......+|+++.+
T Consensus 182 ~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 182 KAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp SHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 126787899984888442378437827799999987998999898999978897368999789799
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.35 E-value=0.093 Score=27.37 Aligned_cols=113 Identities=7% Similarity=0.018 Sum_probs=72.7
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECH
Q ss_conf 99992469999999848994999957982899999999099989888854337531012681028999772683986182
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P 502 (885)
.++-|++.+.++.|++.|+++.++|+... +...-+..|+.... ...+.+.+. ......|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTST
T ss_pred CCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCC--CCCCCCCCC-----------------CCCCCCH
T ss_conf 20258740102212224442489963231--35788763566433--311111111-----------------1123575
Q ss_pred HCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCHHHHHHCCCEEECC
Q ss_conf 00999999985569999999599589355410792-388256108987313888718
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTE 558 (885)
Q Consensus 503 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~~~a~~aaDivl~~ 558 (885)
+-=....+.+.-..+.|+|+||..+|+.+-+.|++ .|+++.+. ....++.++.+
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~~ 203 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEESS
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCHH--HCCCCCEECCC
T ss_conf 88888898739887407999669888999998699899999811--24656477588
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.47 E-value=0.14 Score=25.93 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=39.4
Q ss_pred EEECHHCHHHHHHHHHHCCCEEEEECCCC-CCHHHHHCCCE-EEEE--CCCHHHHH----HCCCEEECCCCCCH
Q ss_conf 86182009999999855699999995995-89355410792-3882--56108987----31388871899405
Q 002743 498 AGVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAV--ADATDAAR----SASDIVLTEPGLSV 563 (885)
Q Consensus 498 ~~~~P~~K~~iV~~l~~~g~~v~~iGDG~-ND~~al~~Adv-GIai--~~~~~~a~----~aaDivl~~~~~~~ 563 (885)
....|+--..+.+.+.-..+.|+||||.. +|+.+-++|++ +|.+ |..+.... ..+|+++. ++..
T Consensus 175 ~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~--sl~e 246 (250)
T d2c4na1 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP--SVAE 246 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES--SGGG
T ss_pred CCCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC--CHHH
T ss_conf 34204667666666327803457846872779999998799899989999998899737899999989--9789
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.39 E-value=0.25 Score=23.99 Aligned_cols=124 Identities=9% Similarity=0.047 Sum_probs=77.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
.+.+++.+.++.++ .+..++|+.....+...-+++|+...... ....+.+.. ...+...|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHC---------------TTCCTTSSH
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCCE-EECCCCCCC---------------CCCCCCCHH
T ss_conf 11345788765103---23225641204555554302344433210-001232112---------------443445889
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCH--------HHHHHCCCEEECCCCCCHHHHHH
Q ss_conf 0999999985569999999599589355410792-38825610--------89873138887189940589999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT--------DAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~--------~~a~~aaDivl~~~~~~~i~~~i 568 (885)
.=....+.+.-..+.++|+||..+|+.+=+.|++ .|++..+. +....-+|+++ +++..+..++
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll 217 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 217 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 99877875089873289975878789999984998999836987875317789767999999--9999999999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.19 E-value=0.34 Score=22.91 Aligned_cols=65 Identities=26% Similarity=0.294 Sum_probs=43.6
Q ss_pred HHCHHHHHHHHHHCCCEEEEECCCC-CCHHHHHCCCE-EEEECCC---HHHHHH---CCCEEECCCCCCHHHHHH
Q ss_conf 2009999999855699999995995-89355410792-3882561---089873---138887189940589999
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA---TDAARS---ASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 502 P~~K~~iV~~l~~~g~~v~~iGDG~-ND~~al~~Adv-GIai~~~---~~~a~~---aaDivl~~~~~~~i~~~i 568 (885)
|.--....+.+.-..+.++|+||.. +|+.+-+.|++ +|.+..| .+.... .+|+++ +++..+.+++
T Consensus 188 p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 188 PLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHHHHHHH
T ss_conf 788888876640472211031687167899999879969998989998778863689998998--8999999976
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=91.10 E-value=0.057 Score=29.06 Aligned_cols=99 Identities=13% Similarity=0.016 Sum_probs=60.1
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHH----HHHHHH------H-HCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 89999246999999984899499995798289----999999------9-099989888854337531012681028999
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGR------R-LGMGTNMYPSSSLLGQDKDASIAALPVDEL 490 (885)
Q Consensus 422 ~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~t----a~~ia~------~-lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (885)
++++.|++.+.++.+++.|.++.++||.+... ...+.. . .+... ..+....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC-------------
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCE-----EEEECCC-------------
T ss_conf 0844878999999998444808999268578899999999997501333579867-----9863255-------------
Q ss_pred HHHCCEEEEECHHCHHHHHHHHHHC-CCEEEEECCCCCCHHHHHCCCEE-EEEC
Q ss_conf 7726839861820099999998556-99999995995893554107923-8825
Q 002743 491 IEKADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG-IAVA 542 (885)
Q Consensus 491 ~~~~~i~~~~~P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvG-Iai~ 542 (885)
..-.+..+..|..+.+.+... ..+++|+||...|+.|.+++++- +.+.
T Consensus 96 ----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~ 145 (149)
T d1ltqa1 96 ----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 145 (149)
T ss_dssp ----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred ----CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEC
T ss_conf ----55667704878999997325777559998697899999998799689718
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=90.66 E-value=0.25 Score=23.86 Aligned_cols=61 Identities=25% Similarity=0.252 Sum_probs=41.8
Q ss_pred EEECHHCHHHHHHHHHHCCCEEEEECCCCC-CHHHHHCCCE-EEEECCC---HHHHHHC---CCEEECC
Q ss_conf 861820099999998556999999959958-9355410792-3882561---0898731---3888718
Q 002743 498 AGVFPEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAVADA---TDAARSA---SDIVLTE 558 (885)
Q Consensus 498 ~~~~P~~K~~iV~~l~~~g~~v~~iGDG~N-D~~al~~Adv-GIai~~~---~~~a~~a---aDivl~~ 558 (885)
+..+|+--..+.+.+.-..+.|+||||..+ |+.+-++|++ +|.+..| .+..... .|+++.+
T Consensus 179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred CCCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 167742001100110345451699827807779999987997999898999978886368999889899
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=90.54 E-value=0.13 Score=26.30 Aligned_cols=123 Identities=8% Similarity=0.045 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHH
Q ss_conf 99924699999998489949999579828999999990999898888543375310126810289997726839861820
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~ 503 (885)
.+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+. ......|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~-----------------~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCC--CCEEEEEEE-----------------ECCCCHHH
T ss_conf 21201078999887517857764211799999987411445532--100222100-----------------01450778
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEE-EEC---CCHHHHHHCCCEEECCCCCCHHHHH
Q ss_conf 099999998556999999959958935541079238-825---6108987313888718994058999
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVA---DATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-ai~---~~~~~a~~aaDivl~~~~~~~i~~~ 567 (885)
-=..+.+.+.-....|+|+||..+|+-+=+.|++-. .+. ...+.....+|+++ +++..++++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHH
T ss_conf 899999981778714899804837699999869979998179987643368999998--999999854
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.81 E-value=0.24 Score=24.08 Aligned_cols=108 Identities=9% Similarity=0.038 Sum_probs=68.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE
Q ss_conf 99924699999998489949999579----82899999999099989888854337531012681028999772683986
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD----~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 499 (885)
.+.|++.+.++.|+++|+++.++|+- ............|+.... ...+ +.+. .....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f--d~i~-~s~~----------------~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF--DFLI-ESCQ----------------VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC--SEEE-EHHH----------------HSCCT
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHH--CEEE-EHHH----------------CCCCC
T ss_conf 888009999999986599457752011111899999998746807551--1100-0544----------------13779
Q ss_pred ECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCHHHHHH
Q ss_conf 18200999999985569999999599589355410792-3882561089873
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARS 550 (885)
Q Consensus 500 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~~~a~~ 550 (885)
-.|+--....+.++-....++|+||..+|+.+-+.|++ +|.+.++.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHH
T ss_conf 9827777888872898632899977988799999859989998994048999
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=87.92 E-value=0.37 Score=22.61 Aligned_cols=135 Identities=19% Similarity=0.104 Sum_probs=65.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC--------HHH-------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 999246999999984899499995798--------289-------99999990999898888543375310126810289
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAI-------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~--------~~t-------a~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
.+-|++.++++.|+++|+++.++|.-. ... ..+.-+..|+................ ...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~----- 121 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVG-PLA----- 121 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCS-TTC-----
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCC-----
T ss_conf 76344899999998629757986165432144542434444336777776641355325887424644566-421-----
Q ss_pred HHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCHHHHHHCCCEEECC-CCCCHHHH
Q ss_conf 9977268398618200999999985569999999599589355410792-388256108987313888718-99405899
Q 002743 489 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTE-PGLSVIIS 566 (885)
Q Consensus 489 ~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~~~a~~aaDivl~~-~~~~~i~~ 566 (885)
.....+..-.|.--.+..+.+.-....+.||||..+|..|=+.|++ +|.+..+... ...+..... .++..+..
T Consensus 122 ---~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~--~~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 122 ---IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA--VQPGFAIRPLRDSSELGD 196 (209)
T ss_dssp ---CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE--EETTEEEEEESSHHHHHH
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCC--CCCCCCCCCCCCHHHHHH
T ss_conf ---236640243201566767773899412689579788999999879948999489976--567755467630527879
Q ss_pred HHH
Q ss_conf 999
Q 002743 567 AVL 569 (885)
Q Consensus 567 ~i~ 569 (885)
++.
T Consensus 197 ll~ 199 (209)
T d2o2xa1 197 LLA 199 (209)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=84.01 E-value=0.85 Score=19.69 Aligned_cols=124 Identities=15% Similarity=0.109 Sum_probs=80.0
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECH
Q ss_conf 99992469999999848994999957982899999999099989888854337531012681028999772683986182
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P 502 (885)
.++-+++.+++++++ |+.+.++|..+...+...-+..|+.... ..++.+.+. ....-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSH
T ss_pred CCCCHHHHHHHHHHH--HHCEEEEECCCHHHHHHHHHHCCCCCCC--CCCCCCCCC-----------------CCCCCCH
T ss_conf 663102367888875--3012677415247788887530222222--222322222-----------------3468638
Q ss_pred HCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEEC-CCHHH-H------------------------HHCCCEE
Q ss_conf 00999999985569999999599589355410792-38825-61089-8------------------------7313888
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVA-DATDA-A------------------------RSASDIV 555 (885)
Q Consensus 503 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~-~~~~~-a------------------------~~aaDiv 555 (885)
+-=...++.+.-..+.|+++||..+|+.+=+.|++ .|.+. .+.+. . ....|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHHCCCHHHEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999999919784338999389999999998699299984788654221224443454012110000355425899999
Q ss_pred ECCCCCCHHHHHHH
Q ss_conf 71899405899999
Q 002743 556 LTEPGLSVIISAVL 569 (885)
Q Consensus 556 l~~~~~~~i~~~i~ 569 (885)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
T ss_conf 8--99999999998
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.86 E-value=0.45 Score=21.90 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=61.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHH----HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE
Q ss_conf 999246999999984899499995798289----9999999099989888854337531012681028999772683986
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~~I~~l~~~GI~v~mlTGD~~~t----a~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 499 (885)
++.+++.+.++.|++.|+++.++|+..... ........++.... ..++...+. ....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f--d~i~~s~~~-----------------~~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIESCQV-----------------GMVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEHHHH-----------------TCCT
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHC--CEEEECCCC-----------------CCCH
T ss_conf 788019999999986348633454341240899999876525738666--389951223-----------------3430
Q ss_pred ECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCE-EEEECCCHHH
Q ss_conf 18200999999985569999999599589355410792-3882561089
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDA 547 (885)
Q Consensus 500 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIai~~~~~~ 547 (885)
..|+-=..+.+.+.-....++|+||...|+.+-+++++ +|.+.++.+.
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~ 208 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHH
T ss_conf 4778888776301568651058816888799999869989998986345
|